Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:26:47 (25687): wrapper (7.7.26015): starting
23:26:47 (25687): wrapper: running run_atlas (--nthreads 4)
[2025-05-24 23:26:47] Arguments: --nthreads 4
[2025-05-24 23:26:47] Threads: 4
[2025-05-24 23:26:47] Checking for CVMFS
[2025-05-24 23:26:47] No cvmfs_config command found, will try listing directly
[2025-05-24 23:26:47] CVMFS is ok
[2025-05-24 23:26:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 23:26:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 23:26:47] Further information can be found at the LHC@home message board.
[2025-05-24 23:26:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 23:26:47] Checking for apptainer binary...
[2025-05-24 23:26:47] which: no apptainer in ((null))
[2025-05-24 23:26:47] apptainer is not installed, using version from CVMFS
[2025-05-24 23:26:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 23:26:47] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-05-24 23:26:47] apptainer works
[2025-05-24 23:26:47] Set ATHENA_PROC_NUMBER=4
[2025-05-24 23:26:47] Set ATHENA_CORE_NUMBER=4
[2025-05-24 23:26:47] Starting ATLAS job with PandaID=6665147463
[2025-05-24 23:26:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot12/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 03:00:38]  *** The last 200 lines of the pilot log: ***
[2025-05-25 03:00:38] 2025-05-25 01:00:09,231 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-25 03:00:38] 2025-05-25 01:00:11,715 | INFO     | monitor loop #869: job 0:6665147463 is in state 'finished'
[2025-05-25 03:00:38] 2025-05-25 01:00:11,718 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 03:00:38] 2025-05-25 01:00:14,221 | INFO     | monitor loop #870: job 0:6665147463 is in state 'finished'
[2025-05-25 03:00:38] 2025-05-25 01:00:14,222 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 03:00:38] 2025-05-25 01:00:16,727 | INFO     | monitor loop #871: job 0:6665147463 is in state 'finished'
[2025-05-25 03:00:38] 2025-05-25 01:00:16,727 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 03:00:38] 2025-05-25 01:00:17,202 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-25 03:00:38] 2025-05-25 01:00:17,203 | INFO     | using path: /scratch/boinc/var/slot12/slots/0/PanDA_Pilot-6665147463/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 03:00:38] 2025-05-25 01:00:17,204 | INFO     | extracted standard info from prmon json
[2025-05-25 03:00:38] 2025-05-25 01:00:17,204 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 03:00:38] 2025-05-25 01:00:17,204 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 03:00:38] 2025-05-25 01:00:17,204 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 03:00:38] 2025-05-25 01:00:17,204 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 03:00:38] 2025-05-25 01:00:17,208 | INFO     | fitting pss+swap vs Time
[2025-05-25 03:00:38] 2025-05-25 01:00:17,209 | INFO     | sum of square deviations: 2830787960.0
[2025-05-25 03:00:38] 2025-05-25 01:00:17,210 | INFO     | sum of deviations: 18304189601.999996
[2025-05-25 03:00:38] 2025-05-25 01:00:17,210 | INFO     | mean x: 1748128406.0
[2025-05-25 03:00:38] 2025-05-25 01:00:17,211 | INFO     | mean y: 2327477.4306220096
[2025-05-25 03:00:38] 2025-05-25 01:00:17,211 | INFO     | -- intersect: -11301265106.757856
[2025-05-25 03:00:38] 2025-05-25 01:00:17,211 | INFO     | intersect: -11301265106.757856
[2025-05-25 03:00:38] 2025-05-25 01:00:17,211 | INFO     | chi2: 1.3472886686132384
[2025-05-25 03:00:38] 2025-05-25 01:00:17,211 | INFO     | sum of square deviations: 2632440055.0
[2025-05-25 03:00:38] 2025-05-25 01:00:17,213 | INFO     | sum of deviations: 17599891318.500004
[2025-05-25 03:00:38] 2025-05-25 01:00:17,213 | INFO     | mean x: 1748128253.5
[2025-05-25 03:00:38] 2025-05-25 01:00:17,213 | INFO     | mean y: 2326935.8284313725
[2025-05-25 03:00:38] 2025-05-25 01:00:17,213 | INFO     | -- intersect: -11685258205.554483
[2025-05-25 03:00:38] 2025-05-25 01:00:17,213 | INFO     | intersect: -11685258205.554483
[2025-05-25 03:00:38] 2025-05-25 01:00:17,214 | INFO     | chi2: 1.3479836277718533
[2025-05-25 03:00:38] 2025-05-25 01:00:17,214 | INFO     | current chi2=1.3479836277718533 (change=-0.05158205326036547 %)
[2025-05-25 03:00:38] 2025-05-25 01:00:17,214 | INFO     | right removable region: 203
[2025-05-25 03:00:38] 2025-05-25 01:00:17,214 | INFO     | sum of square deviations: 2632440055.0
[2025-05-25 03:00:38] 2025-05-25 01:00:17,215 | INFO     | sum of deviations: -6524715397.499999
[2025-05-25 03:00:38] 2025-05-25 01:00:17,215 | INFO     | mean x: 1748128558.5
[2025-05-25 03:00:38] 2025-05-25 01:00:17,216 | INFO     | mean y: 2346284.56372549
[2025-05-25 03:00:38] 2025-05-25 01:00:17,216 | INFO     | -- intersect: 4335224178.892236
[2025-05-25 03:00:38] 2025-05-25 01:00:17,216 | INFO     | intersect: 4335224178.892236
[2025-05-25 03:00:38] 2025-05-25 01:00:17,216 | INFO     | chi2: 0.02076559358841606
[2025-05-25 03:00:38] 2025-05-25 01:00:17,216 | INFO     | current chi2=0.02076559358841606 (change=98.45871237009733 %)
[2025-05-25 03:00:38] 2025-05-25 01:00:17,217 | INFO     | sum of square deviations: 2443580700.0
[2025-05-25 03:00:38] 2025-05-25 01:00:17,218 | INFO     | sum of deviations: -6014611956.000001
[2025-05-25 03:00:38] 2025-05-25 01:00:17,218 | INFO     | mean x: 1748128711.0
[2025-05-25 03:00:38] 2025-05-25 01:00:17,218 | INFO     | mean y: 2345851.3969849246
[2025-05-25 03:00:38] 2025-05-25 01:00:17,218 | INFO     | -- intersect: 4305177284.714277
[2025-05-25 03:00:38] 2025-05-25 01:00:17,218 | INFO     | intersect: 4305177284.714277
[2025-05-25 03:00:38] 2025-05-25 01:00:17,219 | INFO     | chi2: 0.01656935482157016
[2025-05-25 03:00:38] 2025-05-25 01:00:17,219 | INFO     | current chi2=0.01656935482157016 (change=20.207651416171135 %)
[2025-05-25 03:00:38] 2025-05-25 01:00:17,219 | INFO     | left removable region: 20
[2025-05-25 03:00:38] 2025-05-25 01:00:17,219 | INFO     | sum of square deviations: 1900284932.0
[2025-05-25 03:00:38] 2025-05-25 01:00:17,220 | INFO     | sum of deviations: -2409482736.9999986
[2025-05-25 03:00:38] 2025-05-25 01:00:17,220 | INFO     | mean x: 1748128833.0
[2025-05-25 03:00:38] 2025-05-25 01:00:17,223 | INFO     | mean y: 2342275.2404371584
[2025-05-25 03:00:38] 2025-05-25 01:00:17,223 | INFO     | -- intersect: 2218897368.761251
[2025-05-25 03:00:38] 2025-05-25 01:00:17,224 | INFO     | intersect: 2218897368.761251
[2025-05-25 03:00:38] 2025-05-25 01:00:17,224 | INFO     | chi2: 0.010879361469100285
[2025-05-25 03:00:38] 2025-05-25 01:00:17,224 | INFO     | -- intersect: 2218897368.761251
[2025-05-25 03:00:38] 2025-05-25 01:00:17,224 | INFO     | current memory leak: -1.27 B/s (using 183 data points, chi2=0.01)
[2025-05-25 03:00:38] 2025-05-25 01:00:17,225 | INFO     | ..............................
[2025-05-25 03:00:38] 2025-05-25 01:00:17,225 | INFO     | . Timing measurements:
[2025-05-25 03:00:38] 2025-05-25 01:00:17,225 | INFO     | . get job = 0 s
[2025-05-25 03:00:38] 2025-05-25 01:00:17,225 | INFO     | . initial setup = 1 s
[2025-05-25 03:00:38] 2025-05-25 01:00:17,225 | INFO     | . payload setup = 11 s
[2025-05-25 03:00:38] 2025-05-25 01:00:17,225 | INFO     | . stage-in = 0 s
[2025-05-25 03:00:38] 2025-05-25 01:00:17,225 | INFO     | . payload execution = 12749 s
[2025-05-25 03:00:38] 2025-05-25 01:00:17,225 | INFO     | . stage-out = 1 s
[2025-05-25 03:00:38] 2025-05-25 01:00:17,225 | INFO     | . log creation = 0 s
[2025-05-25 03:00:38] 2025-05-25 01:00:17,225 | INFO     | ..............................
[2025-05-25 03:00:38] 2025-05-25 01:00:17,824 | INFO     | 
[2025-05-25 03:00:38] 2025-05-25 01:00:17,824 | INFO     | job summary report
[2025-05-25 03:00:38] 2025-05-25 01:00:17,824 | INFO     | --------------------------------------------------
[2025-05-25 03:00:38] 2025-05-25 01:00:17,824 | INFO     | PanDA job id: 6665147463
[2025-05-25 03:00:38] 2025-05-25 01:00:17,824 | INFO     | task id: 44871837
[2025-05-25 03:00:38] 2025-05-25 01:00:17,824 | INFO     | errors: (none)
[2025-05-25 03:00:38] 2025-05-25 01:00:17,824 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 03:00:38] 2025-05-25 01:00:17,825 | INFO     | pilot state: finished 
[2025-05-25 03:00:38] 2025-05-25 01:00:17,825 | INFO     | transexitcode: 0
[2025-05-25 03:00:38] 2025-05-25 01:00:17,825 | INFO     | exeerrorcode: 0
[2025-05-25 03:00:38] 2025-05-25 01:00:17,825 | INFO     | exeerrordiag: 
[2025-05-25 03:00:38] 2025-05-25 01:00:17,825 | INFO     | exitcode: 0
[2025-05-25 03:00:38] 2025-05-25 01:00:17,825 | INFO     | exitmsg: OK
[2025-05-25 03:00:38] 2025-05-25 01:00:17,825 | INFO     | cpuconsumptiontime: 48057 s
[2025-05-25 03:00:38] 2025-05-25 01:00:17,825 | INFO     | nevents: 400
[2025-05-25 03:00:38] 2025-05-25 01:00:17,825 | INFO     | neventsw: 0
[2025-05-25 03:00:38] 2025-05-25 01:00:17,825 | INFO     | pid: 39292
[2025-05-25 03:00:38] 2025-05-25 01:00:17,825 | INFO     | pgrp: 39292
[2025-05-25 03:00:38] 2025-05-25 01:00:17,825 | INFO     | corecount: 4
[2025-05-25 03:00:38] 2025-05-25 01:00:17,826 | INFO     | event service: False
[2025-05-25 03:00:38] 2025-05-25 01:00:17,826 | INFO     | sizes: {0: 2393745, 7: 2393951, 11: 2393979, 12764: 2424055, 12765: 2433018, 12766: 2433074, 12775: 2433372}
[2025-05-25 03:00:38] 2025-05-25 01:00:17,826 | INFO     | --------------------------------------------------
[2025-05-25 03:00:38] 2025-05-25 01:00:17,826 | INFO     | 
[2025-05-25 03:00:38] 2025-05-25 01:00:17,826 | INFO     | executing command: ls -lF /scratch/boinc/var/slot12/slots/0
[2025-05-25 03:00:38] 2025-05-25 01:00:17,883 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 03:00:38] 2025-05-25 01:00:17,883 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 03:00:38] 2025-05-25 01:00:17,883 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 03:00:38] 2025-05-25 01:00:17,883 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 03:00:38] 2025-05-25 01:00:17,883 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 03:00:38] 2025-05-25 01:00:17,884 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 03:00:38] 2025-05-25 01:00:17,884 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 03:00:38] 2025-05-25 01:00:17,884 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 03:00:38] 2025-05-25 01:00:17,884 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 03:00:38] 2025-05-25 01:00:17,884 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 03:00:38] 2025-05-25 01:00:17,884 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 03:00:38] 2025-05-25 01:00:17,884 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 03:00:38] 2025-05-25 01:00:17,884 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 03:00:38] 2025-05-25 01:00:17,884 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 03:00:38] 2025-05-25 01:00:17,884 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 03:00:38] 2025-05-25 01:00:17,885 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 03:00:38] 2025-05-25 01:00:17,885 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 03:00:38] 2025-05-25 01:00:17,885 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 03:00:38] 2025-05-25 01:00:17,885 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 03:00:38] 2025-05-25 01:00:17,885 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 03:00:38] 2025-05-25 01:00:17,885 | INFO     | job 6665147463 has completed (purged errors)
[2025-05-25 03:00:38] 2025-05-25 01:00:17,885 | INFO     | overall cleanup function is called
[2025-05-25 03:00:38] 2025-05-25 01:00:18,894 | INFO     | --- collectZombieJob: --- 10, [39292]
[2025-05-25 03:00:38] 2025-05-25 01:00:18,894 | INFO     | zombie collector waiting for pid 39292
[2025-05-25 03:00:38] 2025-05-25 01:00:18,896 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 03:00:38] 2025-05-25 01:00:18,896 | INFO     | collected zombie processes
[2025-05-25 03:00:38] 2025-05-25 01:00:18,896 | INFO     | will attempt to kill all subprocesses of pid=39292
[2025-05-25 03:00:38] 2025-05-25 01:00:19,566 | INFO     | process IDs to be killed: [39292] (in reverse order)
[2025-05-25 03:00:38] 2025-05-25 01:00:19,881 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 03:00:38] 2025-05-25 01:00:19,882 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 03:00:38] 2025-05-25 01:00:19,905 | INFO     | did not find any defunct processes belonging to 39292
[2025-05-25 03:00:38] 2025-05-25 01:00:19,923 | INFO     | did not find any defunct processes belonging to 39292
[2025-05-25 03:00:38] 2025-05-25 01:00:19,923 | INFO     | ready for new job
[2025-05-25 03:00:38] 2025-05-25 01:00:19,924 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 03:00:38] 2025-05-25 01:00:19,926 | INFO     | **************************************
[2025-05-25 03:00:38] 2025-05-25 01:00:19,926 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 03:00:38] 2025-05-25 01:00:19,926 | INFO     | **************************************
[2025-05-25 03:00:38] 2025-05-25 01:00:19,926 | INFO     | 
[2025-05-25 03:00:38] 2025-05-25 01:00:19,934 | INFO     | architecture information:
[2025-05-25 03:00:38] 2025-05-25 01:00:19,935 | INFO     | executing command: cat /etc/os-release
[2025-05-25 03:00:38] 2025-05-25 01:00:19,969 | INFO     | cat /etc/os-release:
[2025-05-25 03:00:38] NAME="CentOS Linux"
[2025-05-25 03:00:38] VERSION="7 (Core)"
[2025-05-25 03:00:38] ID="centos"
[2025-05-25 03:00:38] ID_LIKE="rhel fedora"
[2025-05-25 03:00:38] VERSION_ID="7"
[2025-05-25 03:00:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 03:00:38] ANSI_COLOR="0;31"
[2025-05-25 03:00:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 03:00:38] HOME_URL="https://www.centos.org/"
[2025-05-25 03:00:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 03:00:38] 
[2025-05-25 03:00:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 03:00:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 03:00:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 03:00:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 03:00:38] 
[2025-05-25 03:00:38] 2025-05-25 01:00:19,969 | INFO     | **************************************
[2025-05-25 03:00:38] 2025-05-25 01:00:20,472 | INFO     | executing command: df -mP /scratch/boinc/var/slot12/slots/0
[2025-05-25 03:00:38] 2025-05-25 01:00:20,496 | INFO     | sufficient remaining disk space (3306106650624 B)
[2025-05-25 03:00:38] 2025-05-25 01:00:20,496 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 03:00:38] 2025-05-25 01:00:20,496 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 03:00:38] 2025-05-25 01:00:20,496 | INFO     | update_server=False
[2025-05-25 03:00:38] 2025-05-25 01:00:20,497 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 03:00:38] 2025-05-25 01:00:20,497 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 03:00:38] 2025-05-25 01:00:20,497 | INFO     | aborting loop
[2025-05-25 03:00:38] 2025-05-25 01:00:20,618 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 03:00:38] 2025-05-25 01:00:20,618 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 03:00:38] 2025-05-25 01:00:20,618 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 03:00:38] 2025-05-25 01:00:20,898 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 03:00:38] 2025-05-25 01:00:21,054 | INFO     | all job control threads have been joined
[2025-05-25 03:00:38] 2025-05-25 01:00:21,203 | INFO     | all data control threads have been joined
[2025-05-25 03:00:38] 2025-05-25 01:00:21,502 | INFO     | [job] job monitor thread has finished
[2025-05-25 03:00:38] 2025-05-25 01:00:21,502 | INFO     | [job] retrieve thread has finished
[2025-05-25 03:00:38] 2025-05-25 01:00:21,809 | INFO     | [data] copytool_in thread has finished
[2025-05-25 03:00:38] 2025-05-25 01:00:21,819 | INFO     | all payload control threads have been joined
[2025-05-25 03:00:38] 2025-05-25 01:00:22,035 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 03:00:38] 2025-05-25 01:00:22,044 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 03:00:38] 2025-05-25 01:00:22,058 | INFO     | [payload] validate_post thread has finished
[2025-05-25 03:00:38] 2025-05-25 01:00:22,060 | INFO     | [job] control thread has finished
[2025-05-25 03:00:38] 2025-05-25 01:00:22,112 | INFO     | [payload] failed_post thread has finished
[2025-05-25 03:00:38] 2025-05-25 01:00:22,168 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 03:00:38] 2025-05-25 01:00:22,208 | INFO     | [data] control thread has finished
[2025-05-25 03:00:38] 2025-05-25 01:00:22,279 | INFO     | [job] validate thread has finished
[2025-05-25 03:00:38] 2025-05-25 01:00:22,333 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 03:00:38] 2025-05-25 01:00:22,824 | INFO     | [payload] control thread has finished
[2025-05-25 03:00:38] 2025-05-25 01:00:22,903 | INFO     | [data] copytool_out thread has finished
[2025-05-25 03:00:38] 2025-05-25 01:00:23,338 | INFO     | [job] queue monitor thread has finished
[2025-05-25 03:00:38] 2025-05-25 01:00:23,435 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 03:00:38] 2025-05-25 01:00:27,440 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 03:00:38] 2025-05-25 01:00:31,523 | INFO     | job.realtimelogging is not enabled
[2025-05-25 03:00:38] 2025-05-25 01:00:32,528 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 03:00:38] 2025-05-25 01:00:32,801 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23166059501376)>', '<ExcThread(monitor, started 23165805725440)>']
[2025-05-25 03:00:38] 2025-05-25 01:00:33,683 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 03:00:38] 2025-05-25 01:00:33,683 | INFO     | [monitor] control thread has ended
[2025-05-25 03:00:38] 2025-05-25 01:00:37,826 | INFO     | all workflow threads have been joined
[2025-05-25 03:00:38] 2025-05-25 01:00:37,826 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 03:00:38] 2025-05-25 01:00:37,826 | INFO     | traces error code: 0
[2025-05-25 03:00:38] 2025-05-25 01:00:37,826 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 03:00:38] 2025-05-25 01:00:37,951 [wrapper] ==== pilot stdout END ====
[2025-05-25 03:00:38] 2025-05-25 01:00:37,959 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 03:00:38] 2025-05-25 01:00:37,964 [wrapper] pilotpid: 29585
[2025-05-25 03:00:38] 2025-05-25 01:00:37,967 [wrapper] Pilot exit status: 0
[2025-05-25 03:00:38] 2025-05-25 01:00:37,981 [wrapper] pandaids: 6665147463
[2025-05-25 03:00:38] 2025-05-25 01:00:38,124 [wrapper] cleanup supervisor_pilot 1255304 29586
[2025-05-25 03:00:38] 2025-05-25 01:00:38,128 [wrapper] Test setup, not cleaning
[2025-05-25 03:00:38] 2025-05-25 01:00:38,132 [wrapper] apfmon messages muted
[2025-05-25 03:00:38] 2025-05-25 01:00:38,136 [wrapper] ==== wrapper stdout END ====
[2025-05-25 03:00:38] 2025-05-25 01:00:38,140 [wrapper] ==== wrapper stderr END ====
[2025-05-25 03:00:38]  *** Error codes and diagnostics ***
[2025-05-25 03:00:38]     "exeErrorCode": 0,
[2025-05-25 03:00:38]     "exeErrorDiag": "",
[2025-05-25 03:00:38]     "pilotErrorCode": 0,
[2025-05-25 03:00:38]     "pilotErrorDiag": "",
[2025-05-25 03:00:38]  *** Listing of results directory ***
[2025-05-25 03:00:38] total 423528
[2025-05-25 03:00:38] -rw-r--r-- 1 boinc boinc    495897 May 24 04:59 pilot3.tar.gz
[2025-05-25 03:00:38] -rwx------ 1 boinc boinc     37140 May 24 06:05 runpilot2-wrapper.sh
[2025-05-25 03:00:38] -rw-r--r-- 1 boinc boinc      5111 May 24 06:06 queuedata.json
[2025-05-25 03:00:38] -rw-r--r-- 1 boinc boinc       100 May 24 23:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 03:00:38] -rwxr-xr-x 1 boinc boinc      7986 May 24 23:26 run_atlas
[2025-05-25 03:00:38] -rw-r--r-- 1 boinc boinc       105 May 24 23:26 job.xml
[2025-05-25 03:00:38] -rw-r--r-- 1 boinc boinc      6674 May 24 23:26 init_data.xml
[2025-05-25 03:00:38] -rw-r--r-- 2 boinc boinc 227670710 May 24 23:26 EVNT.44871834._000065.pool.root.1
[2025-05-25 03:00:38] -rw-r--r-- 2 boinc boinc     15093 May 24 23:26 start_atlas.sh
[2025-05-25 03:00:38] drwxrwx--x 2 boinc boinc      4096 May 24 23:26 shared
[2025-05-25 03:00:38] -rw-r--r-- 2 boinc boinc    508878 May 24 23:26 input.tar.gz
[2025-05-25 03:00:38] -rw-r--r-- 1 boinc boinc         0 May 24 23:26 boinc_lockfile
[2025-05-25 03:00:38] -rw-r--r-- 1 boinc boinc      2556 May 24 23:26 pandaJob.out
[2025-05-25 03:00:38] -rw------- 1 boinc boinc    990803 May 24 23:27 agis_schedconf.cvmfs.json
[2025-05-25 03:00:38] drwx------ 4 boinc boinc      4096 May 24 23:27 pilot3
[2025-05-25 03:00:38] -rw------- 1 boinc boinc 199236234 May 25 02:59 HITS.44871837._001606.pool.root.1
[2025-05-25 03:00:38] -rw-r--r-- 1 boinc boinc       531 May 25 02:59 boinc_task_state.xml
[2025-05-25 03:00:38] -rw------- 1 boinc boinc        95 May 25 02:59 pilot_heartbeat.json
[2025-05-25 03:00:38] -rw------- 1 boinc boinc      1026 May 25 03:00 memory_monitor_summary.json
[2025-05-25 03:00:38] -rw------- 1 boinc boinc   1596740 May 25 03:00 agis_ddmendpoints.agis.ALL.json
[2025-05-25 03:00:38] -rw------- 1 boinc boinc    314327 May 25 03:00 log.44871837._001606.job.log.tgz.1
[2025-05-25 03:00:38] -rw------- 1 boinc boinc      7695 May 25 03:00 heartbeat.json
[2025-05-25 03:00:38] -rw-r--r-- 1 boinc boinc      8192 May 25 03:00 boinc_mmap_file
[2025-05-25 03:00:38] -rw-r--r-- 1 boinc boinc        28 May 25 03:00 wrapper_checkpoint.txt
[2025-05-25 03:00:38] -rw------- 1 boinc boinc      4436 May 25 03:00 pilotlog.txt
[2025-05-25 03:00:38] -rw------- 1 boinc boinc   1165364 May 25 03:00 log.44871837._001606.job.log.1
[2025-05-25 03:00:38] -rw------- 1 boinc boinc       357 May 25 03:00 output.list
[2025-05-25 03:00:38] -rw-r--r-- 1 boinc boinc       620 May 25 03:00 runtime_log
[2025-05-25 03:00:38] -rw------- 1 boinc boinc   1495040 May 25 03:00 result.tar.gz
[2025-05-25 03:00:38] -rw------- 1 boinc boinc       666 May 25 03:00 vMnMDmVJvc7n9Rq4apOajLDm4fhM0noT9bVof3QYDmQyKKDm4pcWAo.diag
[2025-05-25 03:00:38] -rw-r--r-- 1 boinc boinc      9026 May 25 03:00 runtime_log.err
[2025-05-25 03:00:38] -rw-r--r-- 1 boinc boinc     20934 May 25 03:00 stderr.txt
[2025-05-25 03:00:38] HITS file was successfully produced:
[2025-05-25 03:00:38] -rw------- 1 boinc boinc 199236234 May 25 02:59 shared/HITS.pool.root.1
[2025-05-25 03:00:38]  *** Contents of shared directory: ***
[2025-05-25 03:00:38] total 418888
[2025-05-25 03:00:38] -rw-r--r-- 2 boinc boinc 227670710 May 24 23:26 ATLAS.root_0
[2025-05-25 03:00:38] -rw-r--r-- 2 boinc boinc     15093 May 24 23:26 start_atlas.sh
[2025-05-25 03:00:38] -rw-r--r-- 2 boinc boinc    508878 May 24 23:26 input.tar.gz
[2025-05-25 03:00:38] -rw------- 1 boinc boinc 199236234 May 25 02:59 HITS.pool.root.1
[2025-05-25 03:00:38] -rw------- 1 boinc boinc   1495040 May 25 03:00 result.tar.gz
03:00:40 (25687): run_atlas exited; CPU time 48765.214447
03:00:40 (25687): called boinc_finish(0)

</stderr_txt>
]]>

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