Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:12:48 (3107921): wrapper (7.7.26015): starting
00:12:48 (3107921): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 00:12:48] Arguments: --nthreads 8
[2025-05-24 00:12:48] Threads: 8
[2025-05-24 00:12:48] Checking for CVMFS
[2025-05-24 00:12:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 00:12:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 00:12:48] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 00:12:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 00:12:49] 2.12.6.0 20986 97206 902768 146354 2 608 17649848 32935937 32798 130560 0 587109478 99.691 464485668 19985 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-24 00:12:49] CVMFS is ok
[2025-05-24 00:12:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 00:12:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 00:12:49] Further information can be found at the LHC@home message board.
[2025-05-24 00:12:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 00:12:49] Checking for apptainer binary...
[2025-05-24 00:12:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 00:12:49] Running /usr/bin/apptainer --version
[2025-05-24 00:12:49] apptainer version 1.4.1-1.el9
[2025-05-24 00:12:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 00:12:50] lc-10-10.aglt2.org
[2025-05-24 00:12:50] apptainer works
[2025-05-24 00:12:50] Set ATHENA_PROC_NUMBER=8
[2025-05-24 00:12:50] Set ATHENA_CORE_NUMBER=8
[2025-05-24 00:12:50] Starting ATLAS job with PandaID=6665145706
[2025-05-24 00:12:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 05:50:22]  *** The last 200 lines of the pilot log: ***
[2025-05-24 05:50:22] 2025-05-24 09:50:00,677 | INFO     | extracted standard info from prmon json
[2025-05-24 05:50:22] 2025-05-24 09:50:00,682 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 05:50:22] 2025-05-24 09:50:00,682 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 05:50:22] 2025-05-24 09:50:00,690 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 05:50:22] 2025-05-24 09:50:00,690 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 05:50:22] 2025-05-24 09:50:00,714 | INFO     | fitting pss+swap vs Time
[2025-05-24 05:50:22] 2025-05-24 09:50:00,715 | INFO     | sum of square deviations: 10941910026.631098
[2025-05-24 05:50:22] 2025-05-24 09:50:00,738 | INFO     | sum of deviations: 46977850021.99387
[2025-05-24 05:50:22] 2025-05-24 09:50:00,738 | INFO     | mean x: 1748070159.7164633
[2025-05-24 05:50:22] 2025-05-24 09:50:00,738 | INFO     | mean y: 2093075.4085365853
[2025-05-24 05:50:22] 2025-05-24 09:50:00,738 | INFO     | -- intersect: -7503047945.785455
[2025-05-24 05:50:22] 2025-05-24 09:50:00,738 | INFO     | intersect: -7503047945.785455
[2025-05-24 05:50:22] 2025-05-24 09:50:00,739 | INFO     | chi2: 4.471323776508553
[2025-05-24 05:50:22] 2025-05-24 09:50:00,739 | INFO     | sum of square deviations: 10449102432.829668
[2025-05-24 05:50:22] 2025-05-24 09:50:00,767 | INFO     | sum of deviations: 86458536504.69661
[2025-05-24 05:50:22] 2025-05-24 09:50:00,768 | INFO     | mean x: 1748070007.2167182
[2025-05-24 05:50:22] 2025-05-24 09:50:00,768 | INFO     | mean y: 2105194.204334365
[2025-05-24 05:50:22] 2025-05-24 09:50:00,768 | INFO     | -- intersect: -14461871544.779902
[2025-05-24 05:50:22] 2025-05-24 09:50:00,768 | INFO     | intersect: -14461871544.779902
[2025-05-24 05:50:22] 2025-05-24 09:50:00,776 | INFO     | chi2: 2.916871905219315
[2025-05-24 05:50:22] 2025-05-24 09:50:00,776 | INFO     | current chi2=2.916871905219315 (change=34.76491412802669 %)
[2025-05-24 05:50:22] 2025-05-24 09:50:00,776 | INFO     | sum of square deviations: 9971318132.528336
[2025-05-24 05:50:22] 2025-05-24 09:50:00,779 | INFO     | sum of deviations: 84332958484.50949
[2025-05-24 05:50:22] 2025-05-24 09:50:00,790 | INFO     | mean x: 1748069854.7169812
[2025-05-24 05:50:22] 2025-05-24 09:50:00,790 | INFO     | mean y: 2104512.9056603773
[2025-05-24 05:50:22] 2025-05-24 09:50:00,790 | INFO     | -- intersect: -14782290140.491062
[2025-05-24 05:50:22] 2025-05-24 09:50:00,790 | INFO     | intersect: -14782290140.491062
[2025-05-24 05:50:22] 2025-05-24 09:50:00,791 | INFO     | chi2: 2.917569169181454
[2025-05-24 05:50:22] 2025-05-24 09:50:00,791 | INFO     | current chi2=2.917569169181454 (change=-0.02390451088686244 %)
[2025-05-24 05:50:22] 2025-05-24 09:50:00,791 | INFO     | right removable region: 317
[2025-05-24 05:50:22] 2025-05-24 09:50:00,791 | INFO     | sum of square deviations: 10449079131.393108
[2025-05-24 05:50:22] 2025-05-24 09:50:00,805 | INFO     | sum of deviations: -21567136912.99381
[2025-05-24 05:50:22] 2025-05-24 09:50:00,805 | INFO     | mean x: 1748070312.2198143
[2025-05-24 05:50:22] 2025-05-24 09:50:00,805 | INFO     | mean y: 2114226.4365325077
[2025-05-24 05:50:22] 2025-05-24 09:50:00,805 | INFO     | -- intersect: 3610171097.5838137
[2025-05-24 05:50:22] 2025-05-24 09:50:00,805 | INFO     | intersect: 3610171097.5838137
[2025-05-24 05:50:22] 2025-05-24 09:50:00,805 | INFO     | chi2: 2.0312216939017693
[2025-05-24 05:50:22] 2025-05-24 09:50:00,806 | INFO     | current chi2=2.0312216939017693 (change=54.57225207949815 %)
[2025-05-24 05:50:22] 2025-05-24 09:50:00,806 | INFO     | sum of square deviations: 9971330514.959076
[2025-05-24 05:50:22] 2025-05-24 09:50:00,818 | INFO     | sum of deviations: -43892933667.2107
[2025-05-24 05:50:22] 2025-05-24 09:50:00,839 | INFO     | mean x: 1748070464.7138364
[2025-05-24 05:50:22] 2025-05-24 09:50:00,839 | INFO     | mean y: 2121322.525157233
[2025-05-24 05:50:22] 2025-05-24 09:50:00,839 | INFO     | -- intersect: 7696976170.450084
[2025-05-24 05:50:22] 2025-05-24 09:50:00,839 | INFO     | intersect: 7696976170.450084
[2025-05-24 05:50:22] 2025-05-24 09:50:00,840 | INFO     | chi2: 1.734966973423051
[2025-05-24 05:50:22] 2025-05-24 09:50:00,840 | INFO     | current chi2=1.734966973423051 (change=14.58505102461973 %)
[2025-05-24 05:50:22] 2025-05-24 09:50:00,840 | INFO     | left removable region: 20
[2025-05-24 05:50:22] 2025-05-24 09:50:00,840 | INFO     | sum of square deviations: 8123479989.057206
[2025-05-24 05:50:22] 2025-05-24 09:50:00,854 | INFO     | sum of deviations: -3389217206.925923
[2025-05-24 05:50:22] 2025-05-24 09:50:00,854 | INFO     | mean x: 1748070434.2087543
[2025-05-24 05:50:22] 2025-05-24 09:50:00,855 | INFO     | mean y: 2133300.7407407407
[2025-05-24 05:50:22] 2025-05-24 09:50:00,855 | INFO     | -- intersect: 731450096.3159798
[2025-05-24 05:50:22] 2025-05-24 09:50:00,855 | INFO     | intersect: 731450096.3159798
[2025-05-24 05:50:22] 2025-05-24 09:50:00,855 | INFO     | chi2: 0.1356332269788662
[2025-05-24 05:50:22] 2025-05-24 09:50:00,855 | INFO     | -- intersect: 731450096.3159798
[2025-05-24 05:50:22] 2025-05-24 09:50:00,855 | INFO     | current memory leak: -0.42 B/s (using 297 data points, chi2=0.14)
[2025-05-24 05:50:22] 2025-05-24 09:50:00,856 | INFO     | ..............................
[2025-05-24 05:50:22] 2025-05-24 09:50:00,856 | INFO     | . Timing measurements:
[2025-05-24 05:50:22] 2025-05-24 09:50:00,856 | INFO     | . get job = 0 s
[2025-05-24 05:50:22] 2025-05-24 09:50:00,881 | INFO     | . initial setup = 5 s
[2025-05-24 05:50:22] 2025-05-24 09:50:00,881 | INFO     | . payload setup = 51 s
[2025-05-24 05:50:22] 2025-05-24 09:50:00,881 | INFO     | . stage-in = 0 s
[2025-05-24 05:50:22] 2025-05-24 09:50:00,881 | INFO     | . payload execution = 20006 s
[2025-05-24 05:50:22] 2025-05-24 09:50:00,881 | INFO     | . stage-out = 6 s
[2025-05-24 05:50:22] 2025-05-24 09:50:00,881 | INFO     | . log creation = 0 s
[2025-05-24 05:50:22] 2025-05-24 09:50:00,881 | INFO     | ..............................
[2025-05-24 05:50:22] 2025-05-24 09:50:01,481 | INFO     | 
[2025-05-24 05:50:22] 2025-05-24 09:50:01,481 | INFO     | job summary report
[2025-05-24 05:50:22] 2025-05-24 09:50:01,481 | INFO     | --------------------------------------------------
[2025-05-24 05:50:22] 2025-05-24 09:50:01,481 | INFO     | PanDA job id: 6665145706
[2025-05-24 05:50:22] 2025-05-24 09:50:01,481 | INFO     | task id: 44871837
[2025-05-24 05:50:22] 2025-05-24 09:50:01,481 | INFO     | errors: (none)
[2025-05-24 05:50:22] 2025-05-24 09:50:01,482 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 05:50:22] 2025-05-24 09:50:01,482 | INFO     | pilot state: finished 
[2025-05-24 05:50:22] 2025-05-24 09:50:01,482 | INFO     | transexitcode: 0
[2025-05-24 05:50:22] 2025-05-24 09:50:01,482 | INFO     | exeerrorcode: 0
[2025-05-24 05:50:22] 2025-05-24 09:50:01,482 | INFO     | exeerrordiag: 
[2025-05-24 05:50:22] 2025-05-24 09:50:01,482 | INFO     | exitcode: 0
[2025-05-24 05:50:22] 2025-05-24 09:50:01,482 | INFO     | exitmsg: OK
[2025-05-24 05:50:22] 2025-05-24 09:50:01,482 | INFO     | cpuconsumptiontime: 51536 s
[2025-05-24 05:50:22] 2025-05-24 09:50:01,482 | INFO     | nevents: 400
[2025-05-24 05:50:22] 2025-05-24 09:50:01,482 | INFO     | neventsw: 0
[2025-05-24 05:50:22] 2025-05-24 09:50:01,482 | INFO     | pid: 3211046
[2025-05-24 05:50:22] 2025-05-24 09:50:01,482 | INFO     | pgrp: 3211046
[2025-05-24 05:50:22] 2025-05-24 09:50:01,482 | INFO     | corecount: 8
[2025-05-24 05:50:22] 2025-05-24 09:50:01,482 | INFO     | event service: False
[2025-05-24 05:50:22] 2025-05-24 09:50:01,482 | INFO     | sizes: {0: 2392906, 1: 2393507, 2: 2393619, 3: 2393818, 14: 2393818, 25: 2393846, 32: 2394208, 36: 2394236, 20062: 2426939, 20069: 2435880, 20070: 2435936, 20104: 
[2025-05-24 05:50:22] 2025-05-24 09:50:01,482 | INFO     | --------------------------------------------------
[2025-05-24 05:50:22] 2025-05-24 09:50:01,483 | INFO     | 
[2025-05-24 05:50:22] 2025-05-24 09:50:01,483 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-05-24 05:50:22] 2025-05-24 09:50:01,720 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 05:50:22] 2025-05-24 09:50:01,720 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 05:50:22] 2025-05-24 09:50:01,720 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 05:50:22] 2025-05-24 09:50:01,720 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 05:50:22] 2025-05-24 09:50:01,720 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 05:50:22] 2025-05-24 09:50:01,720 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 05:50:22] 2025-05-24 09:50:01,720 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 05:50:22] 2025-05-24 09:50:01,721 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 05:50:22] 2025-05-24 09:50:01,721 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 05:50:22] 2025-05-24 09:50:01,721 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 05:50:22] 2025-05-24 09:50:01,721 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 05:50:22] 2025-05-24 09:50:01,721 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 05:50:22] 2025-05-24 09:50:01,721 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 05:50:22] 2025-05-24 09:50:01,721 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 05:50:22] 2025-05-24 09:50:01,721 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 05:50:22] 2025-05-24 09:50:01,721 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 05:50:22] 2025-05-24 09:50:01,721 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 05:50:22] 2025-05-24 09:50:01,721 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 05:50:22] 2025-05-24 09:50:01,721 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 05:50:22] 2025-05-24 09:50:01,721 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 05:50:22] 2025-05-24 09:50:01,721 | INFO     | job 6665145706 has completed (purged errors)
[2025-05-24 05:50:22] 2025-05-24 09:50:01,722 | INFO     | overall cleanup function is called
[2025-05-24 05:50:22] 2025-05-24 09:50:02,735 | INFO     | --- collectZombieJob: --- 10, [3211046]
[2025-05-24 05:50:22] 2025-05-24 09:50:02,735 | INFO     | zombie collector waiting for pid 3211046
[2025-05-24 05:50:22] 2025-05-24 09:50:02,735 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 05:50:22] 2025-05-24 09:50:02,735 | INFO     | collected zombie processes
[2025-05-24 05:50:22] 2025-05-24 09:50:02,735 | INFO     | will attempt to kill all subprocesses of pid=3211046
[2025-05-24 05:50:22] 2025-05-24 09:50:04,729 | INFO     | process IDs to be killed: [3211046] (in reverse order)
[2025-05-24 05:50:22] 2025-05-24 09:50:05,076 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 05:50:22] 2025-05-24 09:50:05,078 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 05:50:22] 2025-05-24 09:50:05,269 | INFO     | did not find any defunct processes belonging to 3211046
[2025-05-24 05:50:22] 2025-05-24 09:50:05,413 | INFO     | did not find any defunct processes belonging to 3211046
[2025-05-24 05:50:22] 2025-05-24 09:50:05,414 | INFO     | ready for new job
[2025-05-24 05:50:22] 2025-05-24 09:50:05,414 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 05:50:22] 2025-05-24 09:50:05,415 | INFO     | **************************************
[2025-05-24 05:50:22] 2025-05-24 09:50:05,416 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 05:50:22] 2025-05-24 09:50:05,416 | INFO     | **************************************
[2025-05-24 05:50:22] 2025-05-24 09:50:05,416 | INFO     | 
[2025-05-24 05:50:22] 2025-05-24 09:50:05,445 | INFO     | architecture information:
[2025-05-24 05:50:22] 2025-05-24 09:50:05,475 | INFO     | executing command: cat /etc/os-release
[2025-05-24 05:50:22] 2025-05-24 09:50:05,550 | INFO     | cat /etc/os-release:
[2025-05-24 05:50:22] NAME="CentOS Linux"
[2025-05-24 05:50:22] VERSION="7 (Core)"
[2025-05-24 05:50:22] ID="centos"
[2025-05-24 05:50:22] ID_LIKE="rhel fedora"
[2025-05-24 05:50:22] VERSION_ID="7"
[2025-05-24 05:50:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 05:50:22] ANSI_COLOR="0;31"
[2025-05-24 05:50:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 05:50:22] HOME_URL="https://www.centos.org/"
[2025-05-24 05:50:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 05:50:22] 
[2025-05-24 05:50:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 05:50:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 05:50:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 05:50:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 05:50:22] 
[2025-05-24 05:50:22] 2025-05-24 09:50:05,551 | INFO     | **************************************
[2025-05-24 05:50:22] 2025-05-24 09:50:06,054 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-05-24 05:50:22] 2025-05-24 09:50:06,137 | INFO     | sufficient remaining disk space (93325361152 B)
[2025-05-24 05:50:22] 2025-05-24 09:50:06,138 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 05:50:22] 2025-05-24 09:50:06,138 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 05:50:22] 2025-05-24 09:50:06,138 | INFO     | update_server=False
[2025-05-24 05:50:22] 2025-05-24 09:50:06,138 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 05:50:22] 2025-05-24 09:50:06,274 | INFO     | all data control threads have been joined
[2025-05-24 05:50:22] 2025-05-24 09:50:06,321 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-24 05:50:22] 2025-05-24 09:50:06,321 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-24 05:50:22] 2025-05-24 09:50:06,321 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 05:50:22] 2025-05-24 09:50:06,321 | INFO     | will abort loop
[2025-05-24 05:50:22] 2025-05-24 09:50:06,515 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 05:50:22] 2025-05-24 09:50:07,076 | INFO     | all job control threads have been joined
[2025-05-24 05:50:22] 2025-05-24 09:50:07,101 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 05:50:22] 2025-05-24 09:50:07,101 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 05:50:22] 2025-05-24 09:50:07,101 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 05:50:22] 2025-05-24 09:50:07,144 | INFO     | [job] retrieve thread has finished
[2025-05-24 05:50:22] 2025-05-24 09:50:07,222 | INFO     | all payload control threads have been joined
[2025-05-24 05:50:22] 2025-05-24 09:50:07,293 | INFO     | [data] control thread has finished
[2025-05-24 05:50:22] 2025-05-24 09:50:07,327 | INFO     | [job] job monitor thread has finished
[2025-05-24 05:50:22] 2025-05-24 09:50:07,447 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 05:50:22] 2025-05-24 09:50:07,447 | INFO     | [job] validate thread has finished
[2025-05-24 05:50:22] 2025-05-24 09:50:07,521 | INFO     | [job] queue monitor thread has finished
[2025-05-24 05:50:22] 2025-05-24 09:50:07,558 | INFO     | [payload] failed_post thread has finished
[2025-05-24 05:50:22] 2025-05-24 09:50:07,592 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 05:50:22] 2025-05-24 09:50:07,708 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 05:50:22] 2025-05-24 09:50:07,708 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 05:50:22] 2025-05-24 09:50:07,727 | INFO     | [data] copytool_in thread has finished
[2025-05-24 05:50:22] 2025-05-24 09:50:07,911 | INFO     | [payload] validate_post thread has finished
[2025-05-24 05:50:22] 2025-05-24 09:50:08,046 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 05:50:22] 2025-05-24 09:50:08,082 | INFO     | [job] control thread has finished
[2025-05-24 05:50:22] 2025-05-24 09:50:08,227 | INFO     | [payload] control thread has finished
[2025-05-24 05:50:22] 2025-05-24 09:50:09,534 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 05:50:22] 2025-05-24 09:50:09,608 | INFO     | [data] copytool_out thread has finished
[2025-05-24 05:50:22] 2025-05-24 09:50:13,561 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 05:50:22] 2025-05-24 09:50:15,303 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139977068062528)>', '<ExcThread(monitor, started 139976071182080)>']
[2025-05-24 05:50:22] 2025-05-24 09:50:16,160 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 05:50:22] 2025-05-24 09:50:16,160 | INFO     | [monitor] control thread has ended
[2025-05-24 05:50:22] 2025-05-24 09:50:20,350 | INFO     | all workflow threads have been joined
[2025-05-24 05:50:22] 2025-05-24 09:50:20,350 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 05:50:22] 2025-05-24 09:50:20,350 | INFO     | traces error code: 0
[2025-05-24 05:50:22] 2025-05-24 09:50:20,350 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 05:50:22] 2025-05-24 09:50:20,704 [wrapper] ==== pilot stdout END ====
[2025-05-24 05:50:22] 2025-05-24 09:50:20,755 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 05:50:22] 2025-05-24 09:50:20,809 [wrapper] pilotpid: 3139040
[2025-05-24 05:50:22] 2025-05-24 09:50:20,837 [wrapper] Pilot exit status: 0
[2025-05-24 05:50:22] 2025-05-24 09:50:20,996 [wrapper] pandaids: 6665145706
[2025-05-24 05:50:22] 2025-05-24 09:50:22,003 [wrapper] cleanup supervisor_pilot 2682987 3139041
[2025-05-24 05:50:22] 2025-05-24 09:50:22,013 [wrapper] Test setup, not cleaning
[2025-05-24 05:50:22] 2025-05-24 09:50:22,032 [wrapper] apfmon messages muted
[2025-05-24 05:50:22] 2025-05-24 09:50:22,055 [wrapper] ==== wrapper stdout END ====
[2025-05-24 05:50:22] 2025-05-24 09:50:22,083 [wrapper] ==== wrapper stderr END ====
[2025-05-24 05:50:22]  *** Error codes and diagnostics ***
[2025-05-24 05:50:22]     "exeErrorCode": 0,
[2025-05-24 05:50:22]     "exeErrorDiag": "",
[2025-05-24 05:50:22]     "pilotErrorCode": 0,
[2025-05-24 05:50:22]     "pilotErrorDiag": "",
[2025-05-24 05:50:22]  *** Listing of results directory ***
[2025-05-24 05:50:22] total 417812
[2025-05-24 05:50:22] -rw-r--r--. 1 boincer umatlas    495897 May 23 22:59 pilot3.tar.gz
[2025-05-24 05:50:22] -rw-r--r--. 1 boincer umatlas      5111 May 24 00:03 queuedata.json
[2025-05-24 05:50:22] -rwx------. 1 boincer umatlas     37140 May 24 00:04 runpilot2-wrapper.sh
[2025-05-24 05:50:22] -rw-r--r--. 1 boincer umatlas       100 May 24 00:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 05:50:22] -rwxr-xr-x. 1 boincer umatlas      7986 May 24 00:12 run_atlas
[2025-05-24 05:50:22] -rw-r--r--. 1 boincer umatlas       105 May 24 00:12 job.xml
[2025-05-24 05:50:22] -rw-r--r--. 2 boincer umatlas 225993251 May 24 00:12 EVNT.44871834._000041.pool.root.1
[2025-05-24 05:50:22] -rw-r--r--. 2 boincer umatlas     15093 May 24 00:12 start_atlas.sh
[2025-05-24 05:50:22] drwxrwx--x. 2 boincer umatlas      4096 May 24 00:12 shared
[2025-05-24 05:50:22] -rw-r--r--. 2 boincer umatlas    508876 May 24 00:12 input.tar.gz
[2025-05-24 05:50:22] -rw-r--r--. 1 boincer umatlas         0 May 24 00:12 boinc_lockfile
[2025-05-24 05:50:22] -rw-r--r--. 1 boincer umatlas      2556 May 24 00:12 pandaJob.out
[2025-05-24 05:50:22] -rw-------. 1 boincer umatlas    988604 May 24 00:13 agis_schedconf.cvmfs.json
[2025-05-24 05:50:22] drwx------. 4 boincer umatlas      4096 May 24 00:13 pilot3
[2025-05-24 05:50:22] -rw-------. 1 boincer umatlas 194259479 May 24 05:47 HITS.44871837._001012.pool.root.1
[2025-05-24 05:50:22] -rw-r--r--. 1 boincer umatlas       531 May 24 05:47 boinc_task_state.xml
[2025-05-24 05:50:22] -rw-------. 1 boincer umatlas      1045 May 24 05:49 memory_monitor_summary.json
[2025-05-24 05:50:22] -rw-r--r--. 1 boincer umatlas      6865 May 24 05:49 init_data.xml
[2025-05-24 05:50:22] -rw-------. 1 boincer umatlas   1596740 May 24 05:49 agis_ddmendpoints.agis.ALL.json
[2025-05-24 05:50:22] -rw-------. 1 boincer umatlas    431885 May 24 05:49 log.44871837._001012.job.log.tgz.1
[2025-05-24 05:50:22] -rw-------. 1 boincer umatlas        95 May 24 05:49 pilot_heartbeat.json
[2025-05-24 05:50:22] -rw-r--r--. 1 boincer umatlas      8192 May 24 05:49 boinc_mmap_file
[2025-05-24 05:50:22] -rw-r--r--. 1 boincer umatlas        28 May 24 05:49 wrapper_checkpoint.txt
[2025-05-24 05:50:22] -rw-------. 1 boincer umatlas      7718 May 24 05:50 heartbeat.json
[2025-05-24 05:50:22] -rw-------. 1 boincer umatlas      4539 May 24 05:50 pilotlog.txt
[2025-05-24 05:50:22] -rw-------. 1 boincer umatlas   1442133 May 24 05:50 log.44871837._001012.job.log.1
[2025-05-24 05:50:22] -rw-------. 1 boincer umatlas       357 May 24 05:50 output.list
[2025-05-24 05:50:22] -rw-r--r--. 1 boincer umatlas       620 May 24 05:50 runtime_log
[2025-05-24 05:50:22] -rw-------. 1 boincer umatlas   1894400 May 24 05:50 result.tar.gz
[2025-05-24 05:50:22] -rw-------. 1 boincer umatlas       656 May 24 05:50 XbNODmWIvc7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmR4OKDm7T0Ynm.diag
[2025-05-24 05:50:22] -rw-r--r--. 1 boincer umatlas      8660 May 24 05:50 runtime_log.err
[2025-05-24 05:50:22] -rw-r--r--. 1 boincer umatlas     20912 May 24 05:50 stderr.txt
[2025-05-24 05:50:22] HITS file was successfully produced:
[2025-05-24 05:50:22] -rw-------. 1 boincer umatlas 194259479 May 24 05:47 shared/HITS.pool.root.1
[2025-05-24 05:50:22]  *** Contents of shared directory: ***
[2025-05-24 05:50:22] total 412784
[2025-05-24 05:50:22] -rw-r--r--. 2 boincer umatlas 225993251 May 24 00:12 ATLAS.root_0
[2025-05-24 05:50:22] -rw-r--r--. 2 boincer umatlas     15093 May 24 00:12 start_atlas.sh
[2025-05-24 05:50:22] -rw-r--r--. 2 boincer umatlas    508876 May 24 00:12 input.tar.gz
[2025-05-24 05:50:22] -rw-------. 1 boincer umatlas 194259479 May 24 05:47 HITS.pool.root.1
[2025-05-24 05:50:22] -rw-------. 1 boincer umatlas   1894400 May 24 05:50 result.tar.gz
05:50:24 (3107921): run_atlas exited; CPU time 52797.057430
05:50:24 (3107921): called boinc_finish(0)

</stderr_txt>
]]>

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