Stderr output

<core_client_version>7.16.5</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-25 05:42:20 (12868): Detected: vboxwrapper 26206
2025-05-25 05:42:20 (12868): Detected: BOINC client v7.16.5
2025-05-25 05:42:20 (12868): Detected: VirtualBox VboxManage Interface (Version: 5.2.44)
2025-05-25 05:42:21 (12868): Successfully copied 'init_data.xml' to the shared directory.
2025-05-25 05:42:21 (12868): Create VM. (boinc_5f06cf4acf40e7f4, slot#8)
2025-05-25 05:42:22 (12868): Setting Memory Size for VM. (4400MB)
2025-05-25 05:42:22 (12868): Setting CPU Count for VM. (4)
2025-05-25 05:42:22 (12868): Setting Chipset Options for VM.
2025-05-25 05:42:22 (12868): Setting Graphics Controller Options for VM.
2025-05-25 05:42:23 (12868): Setting Boot Options for VM.
2025-05-25 05:42:23 (12868): Setting Network Configuration for NAT.
2025-05-25 05:42:23 (12868): Enabling VM Network Access.
2025-05-25 05:42:23 (12868): Disabling USB Support for VM.
2025-05-25 05:42:24 (12868): Disabling COM Port Support for VM.
2025-05-25 05:42:24 (12868): Disabling LPT Port Support for VM.
2025-05-25 05:42:24 (12868): Disabling Audio Support for VM.
2025-05-25 05:42:24 (12868): Disabling Clipboard Support for VM.
2025-05-25 05:42:25 (12868): Disabling Drag and Drop Support for VM.
2025-05-25 05:42:25 (12868): Adding storage controller(s) to VM.
2025-05-25 05:42:25 (12868): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-25 05:42:26 (12868): Adding VirtualBox Guest Additions to VM.
2025-05-25 05:42:26 (12868): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-25 05:42:26 (12868): forwarding host port 61858 to guest port 80
2025-05-25 05:42:26 (12868): Enabling remote desktop for VM.
2025-05-25 05:42:27 (12868): Enabling shared directory for VM.
2025-05-25 05:42:27 (12868): Starting VM using VBoxManage interface. (boinc_5f06cf4acf40e7f4, slot#8)
2025-05-25 05:42:32 (12868): Successfully started VM. (PID = '18808')
2025-05-25 05:42:32 (12868): Reporting VM Process ID to BOINC.
2025-05-25 05:42:32 (12868): Guest Log: BIOS: VirtualBox 5.2.44
2025-05-25 05:42:32 (12868): Guest Log: CPUID EDX: 0x178bfbff
2025-05-25 05:42:32 (12868): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-25 05:42:32 (12868): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-25 05:42:32 (12868): Detected: Web Application Enabled (http://localhost:61858)
2025-05-25 05:42:32 (12868): Detected: Remote Desktop Enabled (localhost:61859)
2025-05-25 05:42:32 (12868): Preference change detected
2025-05-25 05:42:32 (12868): Setting CPU throttle for VM. (100%)
2025-05-25 05:42:32 (12868): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-25 05:42:34 (12868): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-25 05:42:34 (12868): Guest Log: BIOS: Booting from Hard Disk...
2025-05-25 05:42:37 (12868): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-25 05:42:37 (12868): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-25 05:42:37 (12868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-25 05:42:37 (12868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-25 05:42:37 (12868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-25 05:42:37 (12868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-25 05:42:37 (12868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-25 05:42:37 (12868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-25 05:42:37 (12868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-25 05:42:37 (12868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-25 05:42:37 (12868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-25 05:42:37 (12868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-25 05:42:37 (12868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-25 05:42:37 (12868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-25 05:42:37 (12868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-25 05:42:37 (12868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-25 05:42:37 (12868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-25 05:42:37 (12868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-25 05:42:37 (12868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-25 05:42:37 (12868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-25 05:42:37 (12868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-25 05:42:37 (12868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-25 05:42:37 (12868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-25 05:42:37 (12868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-25 05:42:37 (12868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-25 05:42:37 (12868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-25 05:42:37 (12868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-25 05:42:37 (12868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-25 05:42:37 (12868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-25 05:42:37 (12868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-25 05:42:37 (12868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-25 05:42:37 (12868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-25 05:42:45 (12868): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-25 05:42:45 (12868): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-25 05:42:52 (12868): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-25 05:42:52 (12868): Guest Log: 00:00:00.000146 main     Log opened 2025-05-25T05:42:51.107528000Z
2025-05-25 05:42:52 (12868): Guest Log: 00:00:00.000234 main     OS Product: Linux
2025-05-25 05:42:52 (12868): Guest Log: 00:00:00.000264 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-25 05:42:52 (12868): Guest Log: 00:00:00.000287 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-25 05:42:52 (12868): Guest Log: 00:00:00.000307 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-25 05:42:52 (12868): Guest Log: 00:00:00.000307 main     Process ID: 1303
2025-05-25 05:42:52 (12868): Guest Log: 00:00:00.000308 main     Package type: LINUX_64BITS_GENERIC
2025-05-25 05:42:52 (12868): Guest Log: 00:00:00.001168 main     5.2.32 r132073 started. Verbose level = 0
2025-05-25 05:42:52 (12868): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-25 05:42:52 (12868): Guest Log: [INFO] Mounting shared directory
2025-05-25 05:42:53 (12868): Guest Log: [INFO] Checking for init_data.xml
2025-05-25 05:42:55 (12868): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-25 05:42:55 (12868): Guest Log: [INFO] Detected branch: prod
2025-05-25 05:42:55 (12868): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-25 05:42:55 (12868): Guest Log: Copying input files
2025-05-25 05:42:58 (12868): Guest Log: Copied input files into RunAtlas.
2025-05-25 05:42:59 (12868): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-25 05:42:59 (12868): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-25 05:42:59 (12868): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-25 05:42:59 (12868): Guest Log: Further information can be found at the LHC@home message board.
2025-05-25 05:43:02 (12868): Guest Log: 00:00:10.004768 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 789 085 490 000ns (GuestNow=1 748 140 982 025 309 000 ns GuestLast=1 748 151 771 110 799 000 ns fSetTimeLastLoop=true )
2025-05-25 05:43:08 (12868): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-25 05:43:08 (12868): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-25 05:43:08 (12868): Guest Log: 2.6.3.0 1576 0 30176 146387 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-25 05:43:09 (12868): Guest Log: copied the webapp to /var/www
2025-05-25 05:43:09 (12868): Guest Log: ATHENA_PROC_NUMBER=4
2025-05-25 05:43:09 (12868): Guest Log: ATHENA_CORE_NUMBER=4
2025-05-25 05:43:09 (12868): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-25 05:43:09 (12868): Guest Log:  *** Starting ATLAS job. (PandaID=6665147458 taskID=44871837) ***
2025-05-25 07:22:35 (12868): Status Report: Elapsed Time: '6000.000000'
2025-05-25 07:22:35 (12868): Status Report: CPU Time: '22276.546875'
2025-05-25 09:02:39 (12868): Status Report: Elapsed Time: '12000.000000'
2025-05-25 09:02:39 (12868): Status Report: CPU Time: '45862.375000'
2025-05-25 10:04:13 (12868): Guest Log:  *** Job finished ***
2025-05-25 10:04:13 (12868): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-25 10:04:13 (12868): Guest Log: 2025-05-25 07:04:02,951 | INFO     | [data] queue_monitor thread has finished
2025-05-25 10:04:13 (12868): Guest Log: 2025-05-25 07:04:06,421 | INFO     | job.realtimelogging is not enabled
2025-05-25 10:04:13 (12868): Guest Log: 2025-05-25 07:04:07,425 | INFO     | [payload] run_realtimelog thread has finished
2025-05-25 10:04:13 (12868): Guest Log: 2025-05-25 07:04:07,490 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140661292861248)>', '<ExcThread(monitor, started 140660715812608)>']
2025-05-25 10:04:13 (12868): Guest Log: 2025-05-25 07:04:08,123 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-25 10:04:13 (12868): Guest Log: 2025-05-25 07:04:08,123 | INFO     | [monitor] control thread has ended
2025-05-25 10:04:13 (12868): Guest Log: 2025-05-25 07:04:12,810 | INFO     | all workflow threads have been joined
2025-05-25 10:04:13 (12868): Guest Log: 2025-05-25 07:04:12,810 | INFO     | end of generic workflow (traces error code: 0)
2025-05-25 10:04:13 (12868): Guest Log: 2025-05-25 07:04:12,810 | INFO     | traces error code: 0
2025-05-25 10:04:13 (12868): Guest Log: 2025-05-25 07:04:12,810 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-25 10:04:13 (12868): Guest Log: 2025-05-25 07:04:12,903 [wrapper] ==== pilot stdout END ====
2025-05-25 10:04:13 (12868): Guest Log: 2025-05-25 07:04:12,908 [wrapper] ==== wrapper stdout RESUME ====
2025-05-25 10:04:13 (12868): Guest Log: 2025-05-25 07:04:12,913 [wrapper] pilotpid: 5888
2025-05-25 10:04:13 (12868): Guest Log: 2025-05-25 07:04:12,919 [wrapper] Pilot exit status: 0
2025-05-25 10:04:13 (12868): Guest Log: 2025-05-25 07:04:12,990 [wrapper] pandaids: 6665147458
2025-05-25 10:04:13 (12868): Guest Log: 2025-05-25 07:04:13,023 [wrapper] cleanup supervisor_pilot 14676 5889
2025-05-25 10:04:13 (12868): Guest Log: 2025-05-25 07:04:13,028 [wrapper] Test setup, not cleaning
2025-05-25 10:04:13 (12868): Guest Log: 2025-05-25 07:04:13,034 [wrapper] apfmon messages muted
2025-05-25 10:04:13 (12868): Guest Log: 2025-05-25 07:04:13,039 [wrapper] ==== wrapper stdout END ====
2025-05-25 10:04:13 (12868): Guest Log: 2025-05-25 07:04:13,044 [wrapper] ==== wrapper stderr END ====
2025-05-25 10:04:13 (12868): Guest Log:  *** Error codes and diagnostics ***
2025-05-25 10:04:13 (12868): Guest Log:     "exeErrorCode": 0,
2025-05-25 10:04:13 (12868): Guest Log:     "exeErrorDiag": "",
2025-05-25 10:04:13 (12868): Guest Log:     "pilotErrorCode": 0,
2025-05-25 10:04:13 (12868): Guest Log:     "pilotErrorDiag": "",
2025-05-25 10:04:13 (12868): Guest Log:  *** Listing of results directory ***
2025-05-25 10:04:13 (12868): Guest Log: total 196276
2025-05-25 10:04:13 (12868): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 24 02:59 pilot3.tar.gz
2025-05-25 10:04:13 (12868): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 24 04:00 queuedata.json
2025-05-25 10:04:13 (12868): Guest Log: -rwx------. 1 atlas atlas     37140 May 24 04:01 runpilot2-wrapper.sh
2025-05-25 10:04:13 (12868): Guest Log: -rwxr-xr-x. 1 atlas atlas      8856 May 25 02:42 init_data.xml
2025-05-25 10:04:13 (12868): Guest Log: -rwxr-xr-x. 1 atlas atlas    508874 May 25 02:42 input.tar.gz
2025-05-25 10:04:13 (12868): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 May 25 02:42 start_atlas.sh
2025-05-25 10:04:13 (12868): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 25 02:42 EVNT.44871834._000065.pool.root.1 -> /data/./ATLAS.root_0
2025-05-25 10:04:13 (12868): Guest Log: -rw-r--r--. 1 atlas atlas      2553 May 25 02:43 pandaJob.out
2025-05-25 10:04:13 (12868): Guest Log: -rw-------. 1 atlas atlas    990803 May 25 02:43 agis_schedconf.cvmfs.json
2025-05-25 10:04:13 (12868): Guest Log: drwx------. 4 atlas atlas      4096 May 25 02:43 pilot3
2025-05-25 10:04:13 (12868): Guest Log: -rw-------. 1 atlas atlas 193944849 May 25 07:03 HITS.44871837._001601.pool.root.1
2025-05-25 10:04:13 (12868): Guest Log: -rw-------. 1 atlas atlas      1031 May 25 07:03 memory_monitor_summary.json
2025-05-25 10:04:13 (12868): Guest Log: -rw-------. 1 atlas atlas   1596740 May 25 07:03 agis_ddmendpoints.agis.ALL.json
2025-05-25 10:04:13 (12868): Guest Log: -rw-------. 1 atlas atlas    322241 May 25 07:03 log.44871837._001601.job.log.tgz.1
2025-05-25 10:04:13 (12868): Guest Log: -rw-------. 1 atlas atlas        95 May 25 07:03 pilot_heartbeat.json
2025-05-25 10:04:13 (12868): Guest Log: -rw-------. 1 atlas atlas      7718 May 25 07:03 heartbeat.json
2025-05-25 10:04:13 (12868): Guest Log: -rw-------. 1 atlas atlas      4608 May 25 07:04 pilotlog.txt
2025-05-25 10:04:13 (12868): Guest Log: -rw-------. 1 atlas atlas   1319565 May 25 07:04 log.44871837._001601.job.log.1
2025-05-25 10:04:13 (12868): Guest Log: -rw-------. 1 atlas atlas       357 May 25 07:04 output.list
2025-05-25 10:04:13 (12868): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 25 07:04 runtime_log
2025-05-25 10:04:13 (12868): Guest Log: -rw-------. 1 atlas atlas   1658880 May 25 07:04 result.tar.gz
2025-05-25 10:04:13 (12868): Guest Log: -rw-r--r--. 1 atlas atlas      8635 May 25 07:04 runtime_log.err
2025-05-25 10:04:13 (12868): Guest Log: -rw-------. 1 atlas atlas       671 May 25 07:04 pnTKDmFGvc7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQxOKDmPrcixm.diag
2025-05-25 10:04:13 (12868): Guest Log: Looking for outputfile HITS.44871837._001601.pool.root.1
2025-05-25 10:04:13 (12868): Guest Log: HITS file was successfully produced
2025-05-25 10:04:13 (12868): Guest Log: -rw-------. 1 atlas atlas 193944849 May 25 07:03 /home/atlas/RunAtlas/HITS.44871837._001601.pool.root.1
2025-05-25 10:04:14 (12868): Guest Log: Successfully finished the ATLAS job!
2025-05-25 10:04:14 (12868): Guest Log: Copying the results back to the shared directory!
2025-05-25 10:04:14 (12868): Guest Log:  *** Contents of shared directory: ***
2025-05-25 10:04:14 (12868): Guest Log: total 413884
2025-05-25 10:04:14 (12868): Guest Log: -rwxrwxrwx. 1 root root 227670710 May 25 02:42 ATLAS.root_0
2025-05-25 10:04:14 (12868): Guest Log: -rwxrwxrwx. 1 root root 193944849 May 25 07:04 HITS.pool.root.1
2025-05-25 10:04:14 (12868): Guest Log: -rwxrwxrwx. 1 root root      8856 May 25 02:42 init_data.xml
2025-05-25 10:04:14 (12868): Guest Log: -rwxrwxrwx. 1 root root    508874 May 24 04:03 input.tar.gz
2025-05-25 10:04:14 (12868): Guest Log: -rwxrwxrwx. 1 root root   1658880 May 25 07:04 result.tar.gz
2025-05-25 10:04:14 (12868): Guest Log: -rwxrwxrwx. 1 root root     15093 May 24 04:03 start_atlas.sh
2025-05-25 10:04:14 (12868): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-25 10:04:14 (12868): VM Completion File Detected.
2025-05-25 10:04:14 (12868): Powering off VM.
2025-05-25 10:04:15 (12868): Successfully stopped VM.
2025-05-25 10:04:15 (12868): Deregistering VM. (boinc_5f06cf4acf40e7f4, slot#8)
2025-05-25 10:04:15 (12868): Removing network bandwidth throttle group from VM.
2025-05-25 10:04:15 (12868): Removing VM from VirtualBox.
10:04:20 (12868): called boinc_finish(0)

</stderr_txt>
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