Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:39:07 (244039): wrapper (7.7.26015): starting
20:39:07 (244039): wrapper: running run_atlas (--nthreads 8)
[2025-05-20 20:39:07] Arguments: --nthreads 8
[2025-05-20 20:39:07] Threads: 8
[2025-05-20 20:39:07] Checking for CVMFS
[2025-05-20 20:39:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-20 20:39:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-20 20:39:08] Running cvmfs_config stat atlas.cern.ch
[2025-05-20 20:39:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-20 20:39:08] 2.12.6.0 5673 10634 264328 146234 2 352 23070155 32935937 19096 16776704 0 21249217 99.599 23771457 11043 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-20 20:39:08] CVMFS is ok
[2025-05-20 20:39:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-20 20:39:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-20 20:39:08] Further information can be found at the LHC@home message board.
[2025-05-20 20:39:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-20 20:39:08] Checking for apptainer binary...
[2025-05-20 20:39:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-20 20:39:08] Running /usr/bin/apptainer --version
[2025-05-20 20:39:08] apptainer version 1.4.0-1.el9
[2025-05-20 20:39:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-20 20:39:09] c6-12-25-3.aglt2.org
[2025-05-20 20:39:09] apptainer works
[2025-05-20 20:39:09] Set ATHENA_PROC_NUMBER=8
[2025-05-20 20:39:09] Set ATHENA_CORE_NUMBER=8
[2025-05-20 20:39:09] Starting ATLAS job with PandaID=6649890310
[2025-05-20 20:39:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-21 05:17:17]  *** The last 200 lines of the pilot log: ***
[2025-05-21 05:17:17] 2025-05-21 09:16:58,228 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-21 05:17:17] 2025-05-21 09:16:58,229 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-21 05:17:17] 2025-05-21 09:16:58,229 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-21 05:17:17] 2025-05-21 09:16:58,256 | INFO     | fitting pss+swap vs Time
[2025-05-21 05:17:17] 2025-05-21 09:16:58,258 | INFO     | sum of square deviations: 40650659879.107925
[2025-05-21 05:17:17] 2025-05-21 09:16:58,274 | INFO     | sum of deviations: 254951087364.31088
[2025-05-21 05:17:17] 2025-05-21 09:16:58,274 | INFO     | mean x: 1747803492.0610237
[2025-05-21 05:17:17] 2025-05-21 09:16:58,275 | INFO     | mean y: 2103510.248031496
[2025-05-21 05:17:17] 2025-05-21 09:16:58,275 | INFO     | -- intersect: -10959696424.249771
[2025-05-21 05:17:17] 2025-05-21 09:16:58,275 | INFO     | intersect: -10959696424.249771
[2025-05-21 05:17:17] 2025-05-21 09:16:58,277 | INFO     | chi2: 6.08532180193586
[2025-05-21 05:17:17] 2025-05-21 09:16:58,279 | INFO     | sum of square deviations: 39462141977.77743
[2025-05-21 05:17:17] 2025-05-21 09:16:58,294 | INFO     | sum of deviations: 311770189268.2582
[2025-05-21 05:17:17] 2025-05-21 09:16:58,295 | INFO     | mean x: 1747803339.5626242
[2025-05-21 05:17:17] 2025-05-21 09:16:58,295 | INFO     | mean y: 2110755.864811133
[2025-05-21 05:17:17] 2025-05-21 09:16:58,295 | INFO     | -- intersect: -13806389002.865808
[2025-05-21 05:17:17] 2025-05-21 09:16:58,295 | INFO     | intersect: -13806389002.865808
[2025-05-21 05:17:17] 2025-05-21 09:16:58,297 | INFO     | chi2: 4.496349145128309
[2025-05-21 05:17:17] 2025-05-21 09:16:58,297 | INFO     | current chi2=4.496349145128309 (change=26.111563340858456 %)
[2025-05-21 05:17:17] 2025-05-21 09:16:58,300 | INFO     | sum of square deviations: 38296958376.192764
[2025-05-21 05:17:17] 2025-05-21 09:16:58,315 | INFO     | sum of deviations: 311848734948.2893
[2025-05-21 05:17:17] 2025-05-21 09:16:58,316 | INFO     | mean x: 1747803187.060241
[2025-05-21 05:17:17] 2025-05-21 09:16:58,316 | INFO     | mean y: 2110766.0903614457
[2025-05-21 05:17:17] 2025-05-21 09:16:58,316 | INFO     | -- intersect: -14230095548.292923
[2025-05-21 05:17:17] 2025-05-21 09:16:58,316 | INFO     | intersect: -14230095548.292923
[2025-05-21 05:17:17] 2025-05-21 09:16:58,318 | INFO     | chi2: 4.487543496558485
[2025-05-21 05:17:17] 2025-05-21 09:16:58,318 | INFO     | current chi2=4.487543496558485 (change=0.1958399645046462 %)
[2025-05-21 05:17:17] 2025-05-21 09:16:58,319 | INFO     | right removable region: 497
[2025-05-21 05:17:17] 2025-05-21 09:16:58,321 | INFO     | sum of square deviations: 39462029737.51886
[2025-05-21 05:17:17] 2025-05-21 09:16:58,341 | INFO     | sum of deviations: 150701251049.328
[2025-05-21 05:17:17] 2025-05-21 09:16:58,341 | INFO     | mean x: 1747803644.5666003
[2025-05-21 05:17:17] 2025-05-21 09:16:58,342 | INFO     | mean y: 2116865.8409542744
[2025-05-21 05:17:17] 2025-05-21 09:16:58,342 | INFO     | -- intersect: -6672557436.944225
[2025-05-21 05:17:17] 2025-05-21 09:16:58,342 | INFO     | intersect: -6672557436.944225
[2025-05-21 05:17:17] 2025-05-21 09:16:58,344 | INFO     | chi2: 3.81462326158937
[2025-05-21 05:17:17] 2025-05-21 09:16:58,344 | INFO     | current chi2=3.81462326158937 (change=37.314354347277686 %)
[2025-05-21 05:17:17] 2025-05-21 09:16:58,346 | INFO     | sum of square deviations: 38296795383.397675
[2025-05-21 05:17:17] 2025-05-21 09:16:58,365 | INFO     | sum of deviations: 84124088497.06026
[2025-05-21 05:17:17] 2025-05-21 09:16:58,365 | INFO     | mean x: 1747803797.0722892
[2025-05-21 05:17:17] 2025-05-21 09:16:58,366 | INFO     | mean y: 2125577.0261044176
[2025-05-21 05:17:17] 2025-05-21 09:16:58,366 | INFO     | -- intersect: -3837161753.112968
[2025-05-21 05:17:17] 2025-05-21 09:16:58,366 | INFO     | intersect: -3837161753.112968
[2025-05-21 05:17:17] 2025-05-21 09:16:58,368 | INFO     | chi2: 2.9937649052285025
[2025-05-21 05:17:17] 2025-05-21 09:16:58,368 | INFO     | current chi2=2.9937649052285025 (change=21.51872675412919 %)
[2025-05-21 05:17:17] 2025-05-21 09:16:58,368 | INFO     | left removable region: 20
[2025-05-21 05:17:17] 2025-05-21 09:16:58,370 | INFO     | sum of square deviations: 33653249341.811333
[2025-05-21 05:17:17] 2025-05-21 09:16:58,384 | INFO     | sum of deviations: 52481443729.8679
[2025-05-21 05:17:17] 2025-05-21 09:16:58,385 | INFO     | mean x: 1747803766.5849056
[2025-05-21 05:17:17] 2025-05-21 09:16:58,385 | INFO     | mean y: 2146098.28721174
[2025-05-21 05:17:17] 2025-05-21 09:16:58,385 | INFO     | -- intersect: -2723512398.91215
[2025-05-21 05:17:17] 2025-05-21 09:16:58,385 | INFO     | intersect: -2723512398.91215
[2025-05-21 05:17:17] 2025-05-21 09:16:58,390 | INFO     | chi2: 0.483335630528228
[2025-05-21 05:17:17] 2025-05-21 09:16:58,393 | INFO     | -- intersect: -2723512398.91215
[2025-05-21 05:17:17] 2025-05-21 09:16:58,393 | INFO     | current memory leak: 1.56 B/s (using 477 data points, chi2=0.48)
[2025-05-21 05:17:17] 2025-05-21 09:16:58,395 | INFO     | ..............................
[2025-05-21 05:17:17] 2025-05-21 09:16:58,396 | INFO     | . Timing measurements:
[2025-05-21 05:17:17] 2025-05-21 09:16:58,396 | INFO     | . get job = 0 s
[2025-05-21 05:17:17] 2025-05-21 09:16:58,396 | INFO     | . initial setup = 5 s
[2025-05-21 05:17:17] 2025-05-21 09:16:58,396 | INFO     | . payload setup = 15 s
[2025-05-21 05:17:17] 2025-05-21 09:16:58,396 | INFO     | . stage-in = 0 s
[2025-05-21 05:17:17] 2025-05-21 09:16:58,396 | INFO     | . payload execution = 30950 s
[2025-05-21 05:17:17] 2025-05-21 09:16:58,397 | INFO     | . stage-out = 6 s
[2025-05-21 05:17:17] 2025-05-21 09:16:58,397 | INFO     | . log creation = 1 s
[2025-05-21 05:17:17] 2025-05-21 09:16:58,397 | INFO     | ..............................
[2025-05-21 05:17:17] 2025-05-21 09:16:58,967 | INFO     | 
[2025-05-21 05:17:17] 2025-05-21 09:16:58,967 | INFO     | job summary report
[2025-05-21 05:17:17] 2025-05-21 09:16:58,967 | INFO     | --------------------------------------------------
[2025-05-21 05:17:17] 2025-05-21 09:16:58,968 | INFO     | PanDA job id: 6649890310
[2025-05-21 05:17:17] 2025-05-21 09:16:58,968 | INFO     | task id: 44638099
[2025-05-21 05:17:17] 2025-05-21 09:16:58,968 | INFO     | errors: (none)
[2025-05-21 05:17:17] 2025-05-21 09:16:58,968 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-21 05:17:17] 2025-05-21 09:16:58,968 | INFO     | pilot state: finished 
[2025-05-21 05:17:17] 2025-05-21 09:16:58,969 | INFO     | transexitcode: 0
[2025-05-21 05:17:17] 2025-05-21 09:16:58,969 | INFO     | exeerrorcode: 0
[2025-05-21 05:17:17] 2025-05-21 09:16:58,969 | INFO     | exeerrordiag: 
[2025-05-21 05:17:17] 2025-05-21 09:16:58,969 | INFO     | exitcode: 0
[2025-05-21 05:17:17] 2025-05-21 09:16:58,969 | INFO     | exitmsg: OK
[2025-05-21 05:17:17] 2025-05-21 09:16:58,970 | INFO     | cpuconsumptiontime: 137588 s
[2025-05-21 05:17:17] 2025-05-21 09:16:58,970 | INFO     | nevents: 400
[2025-05-21 05:17:17] 2025-05-21 09:16:58,970 | INFO     | neventsw: 0
[2025-05-21 05:17:17] 2025-05-21 09:16:58,970 | INFO     | pid: 256972
[2025-05-21 05:17:17] 2025-05-21 09:16:58,970 | INFO     | pgrp: 256972
[2025-05-21 05:17:17] 2025-05-21 09:16:58,975 | INFO     | corecount: 8
[2025-05-21 05:17:17] 2025-05-21 09:16:58,975 | INFO     | event service: False
[2025-05-21 05:17:17] 2025-05-21 09:16:58,975 | INFO     | sizes: {0: 2392874, 1: 2393559, 2: 2393758, 3: 2393758, 13: 2393992, 14: 2394048, 30972: 2431489, 30979: 2440430, 30983: 2440486, 31018: 2440656}
[2025-05-21 05:17:17] 2025-05-21 09:16:58,975 | INFO     | --------------------------------------------------
[2025-05-21 05:17:17] 2025-05-21 09:16:58,976 | INFO     | 
[2025-05-21 05:17:17] 2025-05-21 09:16:58,976 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-21 05:17:17] 2025-05-21 09:16:59,188 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-21 05:17:17] 2025-05-21 09:16:59,189 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-21 05:17:17] 2025-05-21 09:16:59,189 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-21 05:17:17] 2025-05-21 09:16:59,189 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-21 05:17:17] 2025-05-21 09:16:59,189 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-21 05:17:17] 2025-05-21 09:16:59,190 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-21 05:17:17] 2025-05-21 09:16:59,190 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-21 05:17:17] 2025-05-21 09:16:59,190 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-21 05:17:17] 2025-05-21 09:16:59,190 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-21 05:17:17] 2025-05-21 09:16:59,190 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-21 05:17:17] 2025-05-21 09:16:59,191 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-21 05:17:17] 2025-05-21 09:16:59,191 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-21 05:17:17] 2025-05-21 09:16:59,191 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-21 05:17:17] 2025-05-21 09:16:59,191 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-21 05:17:17] 2025-05-21 09:16:59,191 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-21 05:17:17] 2025-05-21 09:16:59,193 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-21 05:17:17] 2025-05-21 09:16:59,193 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-21 05:17:17] 2025-05-21 09:16:59,193 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-21 05:17:17] 2025-05-21 09:16:59,193 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-21 05:17:17] 2025-05-21 09:16:59,194 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-21 05:17:17] 2025-05-21 09:16:59,194 | INFO     | job 6649890310 has completed (purged errors)
[2025-05-21 05:17:17] 2025-05-21 09:16:59,194 | INFO     | overall cleanup function is called
[2025-05-21 05:17:17] 2025-05-21 09:17:00,212 | INFO     | --- collectZombieJob: --- 10, [256972]
[2025-05-21 05:17:17] 2025-05-21 09:17:00,212 | INFO     | zombie collector waiting for pid 256972
[2025-05-21 05:17:17] 2025-05-21 09:17:00,212 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-21 05:17:17] 2025-05-21 09:17:00,213 | INFO     | collected zombie processes
[2025-05-21 05:17:17] 2025-05-21 09:17:00,213 | INFO     | will attempt to kill all subprocesses of pid=256972
[2025-05-21 05:17:17] 2025-05-21 09:17:03,462 | INFO     | PID=248417 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-21 05:17:17] 2025-05-21 09:17:03,464 | INFO     | .. there are 34 such processes running
[2025-05-21 05:17:17] 2025-05-21 09:17:03,565 | INFO     | process IDs to be killed: [256972] (in reverse order)
[2025-05-21 05:17:17] 2025-05-21 09:17:04,342 | WARNING  | found no corresponding commands to process id(s)
[2025-05-21 05:17:17] 2025-05-21 09:17:04,342 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-21 05:17:17] 2025-05-21 09:17:04,403 | INFO     | did not find any defunct processes belonging to 256972
[2025-05-21 05:17:17] 2025-05-21 09:17:04,478 | INFO     | did not find any defunct processes belonging to 256972
[2025-05-21 05:17:17] 2025-05-21 09:17:04,479 | INFO     | ready for new job
[2025-05-21 05:17:17] 2025-05-21 09:17:04,479 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-21 05:17:17] 2025-05-21 09:17:04,484 | INFO     | **************************************
[2025-05-21 05:17:17] 2025-05-21 09:17:04,489 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-21 05:17:17] 2025-05-21 09:17:04,489 | INFO     | **************************************
[2025-05-21 05:17:17] 2025-05-21 09:17:04,489 | INFO     | 
[2025-05-21 05:17:17] 2025-05-21 09:17:04,530 | INFO     | architecture information:
[2025-05-21 05:17:17] 2025-05-21 09:17:04,539 | INFO     | executing command: cat /etc/os-release
[2025-05-21 05:17:17] 2025-05-21 09:17:04,625 | INFO     | cat /etc/os-release:
[2025-05-21 05:17:17] NAME="CentOS Linux"
[2025-05-21 05:17:17] VERSION="7 (Core)"
[2025-05-21 05:17:17] ID="centos"
[2025-05-21 05:17:17] ID_LIKE="rhel fedora"
[2025-05-21 05:17:17] VERSION_ID="7"
[2025-05-21 05:17:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-21 05:17:17] ANSI_COLOR="0;31"
[2025-05-21 05:17:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-21 05:17:17] HOME_URL="https://www.centos.org/"
[2025-05-21 05:17:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-21 05:17:17] 
[2025-05-21 05:17:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-21 05:17:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-21 05:17:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-21 05:17:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-21 05:17:17] 
[2025-05-21 05:17:17] 2025-05-21 09:17:04,626 | INFO     | **************************************
[2025-05-21 05:17:17] 2025-05-21 09:17:05,130 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-21 05:17:17] 2025-05-21 09:17:05,198 | INFO     | sufficient remaining disk space (96535052288 B)
[2025-05-21 05:17:17] 2025-05-21 09:17:05,199 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-21 05:17:17] 2025-05-21 09:17:05,200 | INFO     | current server update state: UPDATING_FINAL
[2025-05-21 05:17:17] 2025-05-21 09:17:05,200 | INFO     | update_server=False
[2025-05-21 05:17:17] 2025-05-21 09:17:05,200 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-21 05:17:17] 2025-05-21 09:17:05,203 | INFO     | all job control threads have been joined
[2025-05-21 05:17:17] 2025-05-21 09:17:05,474 | INFO     | found 0 job(s) in 20 queues
[2025-05-21 05:17:17] 2025-05-21 09:17:05,474 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-21 05:17:17] 2025-05-21 09:17:05,474 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-21 05:17:17] 2025-05-21 09:17:05,540 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-21 05:17:17] 2025-05-21 09:17:05,540 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-21 05:17:17] 2025-05-21 09:17:05,541 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-21 05:17:17] 2025-05-21 09:17:05,541 | INFO     | will abort loop
[2025-05-21 05:17:17] 2025-05-21 09:17:05,564 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-21 05:17:17] 2025-05-21 09:17:05,605 | INFO     | all data control threads have been joined
[2025-05-21 05:17:17] 2025-05-21 09:17:05,679 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-21 05:17:17] 2025-05-21 09:17:06,169 | INFO     | all payload control threads have been joined
[2025-05-21 05:17:17] 2025-05-21 09:17:06,206 | INFO     | [job] retrieve thread has finished
[2025-05-21 05:17:17] 2025-05-21 09:17:06,209 | INFO     | [job] control thread has finished
[2025-05-21 05:17:17] 2025-05-21 09:17:06,347 | INFO     | [payload] execute_payloads thread has finished
[2025-05-21 05:17:17] 2025-05-21 09:17:06,403 | INFO     | [job] validate thread has finished
[2025-05-21 05:17:17] 2025-05-21 09:17:06,413 | INFO     | [job] create_data_payload thread has finished
[2025-05-21 05:17:17] 2025-05-21 09:17:06,454 | INFO     | [payload] validate_pre thread has finished
[2025-05-21 05:17:17] 2025-05-21 09:17:06,481 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-21 05:17:17] 2025-05-21 09:17:06,547 | INFO     | [job] job monitor thread has finished
[2025-05-21 05:17:17] 2025-05-21 09:17:06,611 | INFO     | [data] control thread has finished
[2025-05-21 05:17:17] 2025-05-21 09:17:07,065 | INFO     | [data] copytool_in thread has finished
[2025-05-21 05:17:17] 2025-05-21 09:17:07,175 | INFO     | [payload] control thread has finished
[2025-05-21 05:17:17] 2025-05-21 09:17:07,199 | INFO     | [payload] validate_post thread has finished
[2025-05-21 05:17:17] 2025-05-21 09:17:07,297 | INFO     | [payload] failed_post thread has finished
[2025-05-21 05:17:17] 2025-05-21 09:17:07,571 | INFO     | [data] copytool_out thread has finished
[2025-05-21 05:17:17] 2025-05-21 09:17:07,880 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-21 05:17:17] 2025-05-21 09:17:08,886 | INFO     | [job] queue monitor thread has finished
[2025-05-21 05:17:17] 2025-05-21 09:17:09,688 | INFO     | [data] queue_monitor thread has finished
[2025-05-21 05:17:17] 2025-05-21 09:17:10,958 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139664749184832)>', '<ExcThread(monitor, started 139664249829120)>']
[2025-05-21 05:17:17] 2025-05-21 09:17:11,515 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-21 05:17:17] 2025-05-21 09:17:11,515 | INFO     | [monitor] control thread has ended
[2025-05-21 05:17:17] 2025-05-21 09:17:15,984 | INFO     | all workflow threads have been joined
[2025-05-21 05:17:17] 2025-05-21 09:17:15,984 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-21 05:17:17] 2025-05-21 09:17:15,985 | INFO     | traces error code: 0
[2025-05-21 05:17:17] 2025-05-21 09:17:15,985 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-21 05:17:17] 2025-05-21 09:17:16,367 [wrapper] ==== pilot stdout END ====
[2025-05-21 05:17:17] 2025-05-21 09:17:16,374 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-21 05:17:17] 2025-05-21 09:17:16,379 [wrapper] pilotpid: 248417
[2025-05-21 05:17:17] 2025-05-21 09:17:16,385 [wrapper] Pilot exit status: 0
[2025-05-21 05:17:17] 2025-05-21 09:17:16,432 [wrapper] pandaids: 6649890310
[2025-05-21 05:17:17] 2025-05-21 09:17:16,632 [wrapper] cleanup supervisor_pilot 2220209 248418
[2025-05-21 05:17:17] 2025-05-21 09:17:16,641 [wrapper] Test setup, not cleaning
[2025-05-21 05:17:17] 2025-05-21 09:17:16,650 [wrapper] apfmon messages muted
[2025-05-21 05:17:17] 2025-05-21 09:17:16,655 [wrapper] ==== wrapper stdout END ====
[2025-05-21 05:17:17] 2025-05-21 09:17:16,665 [wrapper] ==== wrapper stderr END ====
[2025-05-21 05:17:17]  *** Error codes and diagnostics ***
[2025-05-21 05:17:17]     "exeErrorCode": 0,
[2025-05-21 05:17:17]     "exeErrorDiag": "",
[2025-05-21 05:17:17]     "pilotErrorCode": 0,
[2025-05-21 05:17:17]     "pilotErrorDiag": "",
[2025-05-21 05:17:17]  *** Listing of results directory ***
[2025-05-21 05:17:17] total 419312
[2025-05-21 05:17:17] -rw-r--r--. 1 boincer umatlas    495897 May 14 08:37 pilot3.tar.gz
[2025-05-21 05:17:17] -rw-r--r--. 1 boincer umatlas      5111 May 14 09:04 queuedata.json
[2025-05-21 05:17:17] -rwx------. 1 boincer umatlas     37140 May 14 09:06 runpilot2-wrapper.sh
[2025-05-21 05:17:17] -rw-r--r--. 1 boincer umatlas       100 May 20 20:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-21 05:17:17] -rwxr-xr-x. 1 boincer umatlas      7986 May 20 20:39 run_atlas
[2025-05-21 05:17:17] -rw-r--r--. 1 boincer umatlas       105 May 20 20:39 job.xml
[2025-05-21 05:17:17] -rw-r--r--. 2 boincer umatlas 221094726 May 20 20:39 EVNT.44638096._000111.pool.root.1
[2025-05-21 05:17:17] -rw-r--r--. 2 boincer umatlas    508876 May 20 20:39 input.tar.gz
[2025-05-21 05:17:17] -rw-r--r--. 2 boincer umatlas     17569 May 20 20:39 start_atlas.sh
[2025-05-21 05:17:17] drwxrwx--x. 2 boincer umatlas      4096 May 20 20:39 shared
[2025-05-21 05:17:17] -rw-r--r--. 1 boincer umatlas         0 May 20 20:39 boinc_lockfile
[2025-05-21 05:17:17] -rw-r--r--. 1 boincer umatlas      2535 May 20 20:39 pandaJob.out
[2025-05-21 05:17:17] -rw-------. 1 boincer umatlas       467 May 20 20:39 setup.sh.local
[2025-05-21 05:17:17] -rw-------. 1 boincer umatlas    995247 May 20 20:39 agis_schedconf.cvmfs.json
[2025-05-21 05:17:17] drwx------. 4 boincer umatlas      4096 May 20 20:39 pilot3
[2025-05-21 05:17:17] -rw-r--r--. 1 boincer umatlas      6860 May 21 05:13 init_data.xml
[2025-05-21 05:17:17] -rw-------. 1 boincer umatlas 199103351 May 21 05:14 HITS.44638099._002749.pool.root.1
[2025-05-21 05:17:17] -rw-r--r--. 1 boincer umatlas       532 May 21 05:14 boinc_task_state.xml
[2025-05-21 05:17:17] -rw-------. 1 boincer umatlas      1041 May 21 05:16 memory_monitor_summary.json
[2025-05-21 05:17:17] -rw-------. 1 boincer umatlas   1596741 May 21 05:16 agis_ddmendpoints.agis.ALL.json
[2025-05-21 05:17:17] -rw-------. 1 boincer umatlas    506903 May 21 05:16 log.44638099._002749.job.log.tgz.1
[2025-05-21 05:17:17] -rw-------. 1 boincer umatlas      7725 May 21 05:16 heartbeat.json
[2025-05-21 05:17:17] -rw-r--r--. 1 boincer umatlas      8192 May 21 05:17 boinc_mmap_file
[2025-05-21 05:17:17] -rw-r--r--. 1 boincer umatlas        29 May 21 05:17 wrapper_checkpoint.txt
[2025-05-21 05:17:17] -rw-------. 1 boincer umatlas        95 May 21 05:17 pilot_heartbeat.json
[2025-05-21 05:17:17] -rw-------. 1 boincer umatlas      4539 May 21 05:17 pilotlog.txt
[2025-05-21 05:17:17] -rw-------. 1 boincer umatlas   2159676 May 21 05:17 log.44638099._002749.job.log.1
[2025-05-21 05:17:17] -rw-------. 1 boincer umatlas       357 May 21 05:17 output.list
[2025-05-21 05:17:17] -rw-r--r--. 1 boincer umatlas       620 May 21 05:17 runtime_log
[2025-05-21 05:17:17] -rw-------. 1 boincer umatlas   2682880 May 21 05:17 result.tar.gz
[2025-05-21 05:17:17] -rw-------. 1 boincer umatlas       662 May 21 05:17 zcFODmazQZ7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWUFKDm3WdbOo.diag
[2025-05-21 05:17:17] -rw-r--r--. 1 boincer umatlas     11429 May 21 05:17 runtime_log.err
[2025-05-21 05:17:17] -rw-r--r--. 1 boincer umatlas     20992 May 21 05:17 stderr.txt
[2025-05-21 05:17:17] HITS file was successfully produced:
[2025-05-21 05:17:17] -rw-------. 1 boincer umatlas 199103351 May 21 05:14 shared/HITS.pool.root.1
[2025-05-21 05:17:17]  *** Contents of shared directory: ***
[2025-05-21 05:17:17] total 413504
[2025-05-21 05:17:17] -rw-r--r--. 2 boincer umatlas 221094726 May 20 20:39 ATLAS.root_0
[2025-05-21 05:17:17] -rw-r--r--. 2 boincer umatlas    508876 May 20 20:39 input.tar.gz
[2025-05-21 05:17:17] -rw-r--r--. 2 boincer umatlas     17569 May 20 20:39 start_atlas.sh
[2025-05-21 05:17:17] -rw-------. 1 boincer umatlas 199103351 May 21 05:14 HITS.pool.root.1
[2025-05-21 05:17:17] -rw-------. 1 boincer umatlas   2682880 May 21 05:17 result.tar.gz
05:17:18 (244039): run_atlas exited; CPU time 140636.911012
05:17:18 (244039): called boinc_finish(0)

</stderr_txt>
]]>

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