Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:44:17 (929975): wrapper (7.7.26015): starting
23:44:17 (929975): wrapper: running run_atlas (--nthreads 8)
[2025-05-18 23:44:17] Arguments: --nthreads 8
[2025-05-18 23:44:17] Threads: 8
[2025-05-18 23:44:17] Checking for CVMFS
[2025-05-18 23:44:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-18 23:44:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-18 23:44:17] Running cvmfs_config stat atlas.cern.ch
[2025-05-18 23:44:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-18 23:44:17] 2.12.6.0 20986 89978 832524 146159 3 194 21524961 32935936 14860 130560 0 522886483 99.685 421193679 19710 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-18 23:44:17] CVMFS is ok
[2025-05-18 23:44:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-18 23:44:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-18 23:44:17] Further information can be found at the LHC@home message board.
[2025-05-18 23:44:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-18 23:44:17] Checking for apptainer binary...
[2025-05-18 23:44:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-18 23:44:17] Running /usr/bin/apptainer --version
[2025-05-18 23:44:18] apptainer version 1.4.0-1.el9
[2025-05-18 23:44:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-18 23:44:18] lc-10-10.aglt2.org
[2025-05-18 23:44:18] apptainer works
[2025-05-18 23:44:18] Set ATHENA_PROC_NUMBER=8
[2025-05-18 23:44:18] Set ATHENA_CORE_NUMBER=8
[2025-05-18 23:44:18] Starting ATLAS job with PandaID=6650329555
[2025-05-18 23:44:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-19 01:12:22]  *** The last 200 lines of the pilot log: ***
[2025-05-19 01:12:22]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-19 01:12:22]  is_altstaged=None
[2025-05-19 01:12:22]  is_tar=False
[2025-05-19 01:12:22]  lfn=log.44638099._024025.job.log.tgz.1
[2025-05-19 01:12:22]  mtime=0
[2025-05-19 01:12:22]  protocol_id=None
[2025-05-19 01:12:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-19 01:12:22]  replicas=None
[2025-05-19 01:12:22]  scope=mc23_13p6TeV
[2025-05-19 01:12:22]  status=None
[2025-05-19 01:12:22]  status_code=0
[2025-05-19 01:12:22]  storage_token=
[2025-05-19 01:12:22]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6650329555/log.44638099._024025.job.log.tgz.1
[2025-05-19 01:12:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/26/log.44638099._024025.job.log.tgz.1
[2025-05-19 01:12:22]  workdir=None
[2025-05-19 01:12:22] ]
[2025-05-19 01:12:22] 2025-05-19 05:11:57,140 | INFO     | transferring file log.44638099._024025.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6650329555/log.44638099._024025.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-05-19 01:12:22] 2025-05-19 05:11:57,140 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6650329555/log.44638099._024025.job.log.tgz.1 /tmp/boinchome/slots/1/log.44638099._024025.job
[2025-05-19 01:12:22] 2025-05-19 05:11:57,159 | INFO     | adding to output.list: log.44638099._024025.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/26/log.44638099._024025.job.log.tg
[2025-05-19 01:12:22] 2025-05-19 05:11:57,160 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-19 01:12:22] 2025-05-19 05:11:57,160 | INFO     | summary of transferred files:
[2025-05-19 01:12:22] 2025-05-19 05:11:57,160 | INFO     |  -- lfn=log.44638099._024025.job.log.tgz.1, status_code=0, status=transferred
[2025-05-19 01:12:22] 2025-05-19 05:11:57,160 | INFO     | stage-out finished correctly
[2025-05-19 01:12:22] 2025-05-19 05:11:57,498 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-19 01:12:22] 2025-05-19 05:11:58,577 | INFO     | job 6650329555 has state=finished
[2025-05-19 01:12:22] 2025-05-19 05:11:58,577 | INFO     | preparing for final server update for job 6650329555 in state='finished'
[2025-05-19 01:12:22] 2025-05-19 05:11:58,577 | INFO     | this job has now completed (state=finished)
[2025-05-19 01:12:22] 2025-05-19 05:11:58,577 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-19 01:12:22] 2025-05-19 05:11:58,578 | INFO     | log transfer has been attempted: DONE
[2025-05-19 01:12:22] 2025-05-19 05:11:58,578 | INFO     | job 6650329555 has finished - writing final server update
[2025-05-19 01:12:22] 2025-05-19 05:11:58,578 | INFO     | total number of processed events: 400 (read)
[2025-05-19 01:12:22] 2025-05-19 05:11:58,595 | INFO     | executing command: lscpu
[2025-05-19 01:12:22] 2025-05-19 05:11:58,664 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-19 01:12:22] 2025-05-19 05:12:02,299 | WARNING  | process 942165 can no longer be monitored (due to stat problems) - aborting
[2025-05-19 01:12:22] 2025-05-19 05:12:02,300 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6650329555/memory_monitor_summary.json (trf name=prmon)
[2025-05-19 01:12:22] 2025-05-19 05:12:02,622 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-19 01:12:22] 2025-05-19 05:12:02,623 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6650329555/memory_monitor_summary.json (trf name=prmon)
[2025-05-19 01:12:22] 2025-05-19 05:12:02,624 | INFO     | extracted standard info from prmon json
[2025-05-19 01:12:22] 2025-05-19 05:12:02,624 | INFO     | extracted standard memory fields from prmon json
[2025-05-19 01:12:22] 2025-05-19 05:12:02,624 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-19 01:12:22] 2025-05-19 05:12:02,624 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-19 01:12:22] 2025-05-19 05:12:02,625 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-19 01:12:22] 2025-05-19 05:12:02,627 | INFO     | fitting pss+swap vs Time
[2025-05-19 01:12:22] 2025-05-19 05:12:02,627 | INFO     | sum of square deviations: 152858680.0
[2025-05-19 01:12:22] 2025-05-19 05:12:02,627 | INFO     | sum of deviations: 14404276785.0
[2025-05-19 01:12:22] 2025-05-19 05:12:02,627 | INFO     | mean x: 1747628980.0
[2025-05-19 01:12:22] 2025-05-19 05:12:02,627 | INFO     | mean y: 2126583.9620253164
[2025-05-19 01:12:22] 2025-05-19 05:12:02,627 | INFO     | -- intersect: -164681563903.27252
[2025-05-19 01:12:22] 2025-05-19 05:12:02,628 | INFO     | intersect: -164681563903.27252
[2025-05-19 01:12:22] 2025-05-19 05:12:02,628 | INFO     | chi2: 1.6872178979474395
[2025-05-19 01:12:22] 2025-05-19 05:12:02,628 | INFO     | -- intersect: -164681563903.27252
[2025-05-19 01:12:22] 2025-05-19 05:12:02,628 | INFO     | current memory leak: 94.23 B/s (using 79 data points, chi2=1.69)
[2025-05-19 01:12:22] 2025-05-19 05:12:02,629 | INFO     | ..............................
[2025-05-19 01:12:22] 2025-05-19 05:12:02,629 | INFO     | . Timing measurements:
[2025-05-19 01:12:22] 2025-05-19 05:12:02,629 | INFO     | . get job = 0 s
[2025-05-19 01:12:22] 2025-05-19 05:12:02,629 | INFO     | . initial setup = 2 s
[2025-05-19 01:12:22] 2025-05-19 05:12:02,629 | INFO     | . payload setup = 6 s
[2025-05-19 01:12:22] 2025-05-19 05:12:02,629 | INFO     | . stage-in = 0 s
[2025-05-19 01:12:22] 2025-05-19 05:12:02,629 | INFO     | . payload execution = 5224 s
[2025-05-19 01:12:22] 2025-05-19 05:12:02,629 | INFO     | . stage-out = 0 s
[2025-05-19 01:12:22] 2025-05-19 05:12:02,629 | INFO     | . log creation = 0 s
[2025-05-19 01:12:22] 2025-05-19 05:12:02,630 | INFO     | ..............................
[2025-05-19 01:12:22] 2025-05-19 05:12:02,717 | INFO     | 
[2025-05-19 01:12:22] 2025-05-19 05:12:02,718 | INFO     | job summary report
[2025-05-19 01:12:22] 2025-05-19 05:12:02,718 | INFO     | --------------------------------------------------
[2025-05-19 01:12:22] 2025-05-19 05:12:02,718 | INFO     | PanDA job id: 6650329555
[2025-05-19 01:12:22] 2025-05-19 05:12:02,718 | INFO     | task id: 44638099
[2025-05-19 01:12:22] 2025-05-19 05:12:02,718 | INFO     | errors: (none)
[2025-05-19 01:12:22] 2025-05-19 05:12:02,718 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-19 01:12:22] 2025-05-19 05:12:02,718 | INFO     | pilot state: finished 
[2025-05-19 01:12:22] 2025-05-19 05:12:02,718 | INFO     | transexitcode: 0
[2025-05-19 01:12:22] 2025-05-19 05:12:02,719 | INFO     | exeerrorcode: 0
[2025-05-19 01:12:22] 2025-05-19 05:12:02,719 | INFO     | exeerrordiag: 
[2025-05-19 01:12:22] 2025-05-19 05:12:02,719 | INFO     | exitcode: 0
[2025-05-19 01:12:22] 2025-05-19 05:12:02,719 | INFO     | exitmsg: OK
[2025-05-19 01:12:22] 2025-05-19 05:12:02,719 | INFO     | cpuconsumptiontime: 34702 s
[2025-05-19 01:12:22] 2025-05-19 05:12:02,719 | INFO     | nevents: 400
[2025-05-19 01:12:22] 2025-05-19 05:12:02,719 | INFO     | neventsw: 0
[2025-05-19 01:12:22] 2025-05-19 05:12:02,719 | INFO     | pid: 942165
[2025-05-19 01:12:22] 2025-05-19 05:12:02,719 | INFO     | pgrp: 942165
[2025-05-19 01:12:22] 2025-05-19 05:12:02,719 | INFO     | corecount: 8
[2025-05-19 01:12:22] 2025-05-19 05:12:02,720 | INFO     | event service: False
[2025-05-19 01:12:22] 2025-05-19 05:12:02,720 | INFO     | sizes: {0: 2393660, 1: 2393660, 5: 2393894, 11: 2393950, 5231: 2420234, 5232: 2429359, 5237: 2429473}
[2025-05-19 01:12:22] 2025-05-19 05:12:02,720 | INFO     | --------------------------------------------------
[2025-05-19 01:12:22] 2025-05-19 05:12:02,720 | INFO     | 
[2025-05-19 01:12:22] 2025-05-19 05:12:02,720 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-05-19 01:12:22] 2025-05-19 05:12:02,740 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-19 01:12:22] 2025-05-19 05:12:02,740 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-19 01:12:22] 2025-05-19 05:12:02,740 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-19 01:12:22] 2025-05-19 05:12:02,740 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-19 01:12:22] 2025-05-19 05:12:02,740 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-19 01:12:22] 2025-05-19 05:12:02,741 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-19 01:12:22] 2025-05-19 05:12:02,741 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-19 01:12:22] 2025-05-19 05:12:02,741 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-19 01:12:22] 2025-05-19 05:12:02,741 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-19 01:12:22] 2025-05-19 05:12:02,741 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-19 01:12:22] 2025-05-19 05:12:02,741 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-19 01:12:22] 2025-05-19 05:12:02,741 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-19 01:12:22] 2025-05-19 05:12:02,741 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-19 01:12:22] 2025-05-19 05:12:02,741 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-19 01:12:22] 2025-05-19 05:12:02,741 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-19 01:12:22] 2025-05-19 05:12:02,741 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-19 01:12:22] 2025-05-19 05:12:02,741 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-19 01:12:22] 2025-05-19 05:12:02,741 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-19 01:12:22] 2025-05-19 05:12:02,741 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-19 01:12:22] 2025-05-19 05:12:02,741 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-19 01:12:22] 2025-05-19 05:12:02,741 | INFO     | job 6650329555 has completed (purged errors)
[2025-05-19 01:12:22] 2025-05-19 05:12:02,741 | INFO     | overall cleanup function is called
[2025-05-19 01:12:22] 2025-05-19 05:12:02,844 | INFO     | number of running child processes to parent process 942165: 1
[2025-05-19 01:12:22] 2025-05-19 05:12:02,844 | INFO     | maximum number of monitored processes: 6
[2025-05-19 01:12:22] 2025-05-19 05:12:02,844 | INFO     | aborting job monitoring since job object (job id=6650329555) has expired
[2025-05-19 01:12:22] 2025-05-19 05:12:03,749 | INFO     | --- collectZombieJob: --- 10, [942165]
[2025-05-19 01:12:22] 2025-05-19 05:12:03,749 | INFO     | zombie collector waiting for pid 942165
[2025-05-19 01:12:22] 2025-05-19 05:12:03,750 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-19 01:12:22] 2025-05-19 05:12:03,750 | INFO     | collected zombie processes
[2025-05-19 01:12:22] 2025-05-19 05:12:03,750 | INFO     | will attempt to kill all subprocesses of pid=942165
[2025-05-19 01:12:22] 2025-05-19 05:12:04,199 | INFO     | process IDs to be killed: [942165] (in reverse order)
[2025-05-19 01:12:22] 2025-05-19 05:12:04,336 | WARNING  | found no corresponding commands to process id(s)
[2025-05-19 01:12:22] 2025-05-19 05:12:04,336 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-19 01:12:22] 2025-05-19 05:12:04,355 | INFO     | did not find any defunct processes belonging to 942165
[2025-05-19 01:12:22] 2025-05-19 05:12:04,375 | INFO     | did not find any defunct processes belonging to 942165
[2025-05-19 01:12:22] 2025-05-19 05:12:04,375 | INFO     | ready for new job
[2025-05-19 01:12:22] 2025-05-19 05:12:04,375 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-19 01:12:22] 2025-05-19 05:12:04,377 | INFO     | **************************************
[2025-05-19 01:12:22] 2025-05-19 05:12:04,377 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-19 01:12:22] 2025-05-19 05:12:04,377 | INFO     | **************************************
[2025-05-19 01:12:22] 2025-05-19 05:12:04,377 | INFO     | 
[2025-05-19 01:12:22] 2025-05-19 05:12:04,393 | INFO     | architecture information:
[2025-05-19 01:12:22] 2025-05-19 05:12:04,394 | INFO     | executing command: cat /etc/os-release
[2025-05-19 01:12:22] 2025-05-19 05:12:04,410 | INFO     | cat /etc/os-release:
[2025-05-19 01:12:22] NAME="CentOS Linux"
[2025-05-19 01:12:22] VERSION="7 (Core)"
[2025-05-19 01:12:22] ID="centos"
[2025-05-19 01:12:22] ID_LIKE="rhel fedora"
[2025-05-19 01:12:22] VERSION_ID="7"
[2025-05-19 01:12:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-19 01:12:22] ANSI_COLOR="0;31"
[2025-05-19 01:12:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-19 01:12:22] HOME_URL="https://www.centos.org/"
[2025-05-19 01:12:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-19 01:12:22] 
[2025-05-19 01:12:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-19 01:12:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-19 01:12:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-19 01:12:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-19 01:12:22] 
[2025-05-19 01:12:22] 2025-05-19 05:12:04,410 | INFO     | **************************************
[2025-05-19 01:12:22] 2025-05-19 05:12:04,913 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-05-19 01:12:22] 2025-05-19 05:12:04,929 | INFO     | sufficient remaining disk space (96495206400 B)
[2025-05-19 01:12:22] 2025-05-19 05:12:04,929 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-19 01:12:22] 2025-05-19 05:12:04,929 | INFO     | current server update state: UPDATING_FINAL
[2025-05-19 01:12:22] 2025-05-19 05:12:04,929 | INFO     | update_server=False
[2025-05-19 01:12:22] 2025-05-19 05:12:04,929 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-19 01:12:22] 2025-05-19 05:12:05,261 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-19 01:12:22] 2025-05-19 05:12:05,347 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-19 01:12:22] 2025-05-19 05:12:05,347 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-19 01:12:22] 2025-05-19 05:12:05,347 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-19 01:12:22] 2025-05-19 05:12:05,347 | INFO     | will abort loop
[2025-05-19 01:12:22] 2025-05-19 05:12:05,386 | INFO     | all payload control threads have been joined
[2025-05-19 01:12:22] 2025-05-19 05:12:05,608 | INFO     | found 0 job(s) in 20 queues
[2025-05-19 01:12:22] 2025-05-19 05:12:05,608 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-19 01:12:22] 2025-05-19 05:12:05,608 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-19 01:12:22] 2025-05-19 05:12:05,689 | INFO     | all data control threads have been joined
[2025-05-19 01:12:22] 2025-05-19 05:12:05,931 | INFO     | [job] retrieve thread has finished
[2025-05-19 01:12:22] 2025-05-19 05:12:06,094 | INFO     | [payload] execute_payloads thread has finished
[2025-05-19 01:12:22] 2025-05-19 05:12:06,184 | INFO     | all job control threads have been joined
[2025-05-19 01:12:22] 2025-05-19 05:12:06,253 | INFO     | [job] validate thread has finished
[2025-05-19 01:12:22] 2025-05-19 05:12:06,311 | INFO     | [payload] failed_post thread has finished
[2025-05-19 01:12:22] 2025-05-19 05:12:06,352 | INFO     | [job] job monitor thread has finished
[2025-05-19 01:12:22] 2025-05-19 05:12:06,362 | INFO     | [job] create_data_payload thread has finished
[2025-05-19 01:12:22] 2025-05-19 05:12:06,392 | INFO     | [payload] control thread has finished
[2025-05-19 01:12:22] 2025-05-19 05:12:06,414 | INFO     | [payload] validate_pre thread has finished
[2025-05-19 01:12:22] 2025-05-19 05:12:06,694 | INFO     | [data] control thread has finished
[2025-05-19 01:12:22] 2025-05-19 05:12:06,799 | INFO     | [data] copytool_in thread has finished
[2025-05-19 01:12:22] 2025-05-19 05:12:06,978 | INFO     | [payload] validate_post thread has finished
[2025-05-19 01:12:22] 2025-05-19 05:12:07,189 | INFO     | [job] control thread has finished
[2025-05-19 01:12:22] 2025-05-19 05:12:07,266 | INFO     | [data] copytool_out thread has finished
[2025-05-19 01:12:22] 2025-05-19 05:12:07,727 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-19 01:12:22] 2025-05-19 05:12:08,096 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-19 01:12:22] 2025-05-19 05:12:08,732 | INFO     | [job] queue monitor thread has finished
[2025-05-19 01:12:22] 2025-05-19 05:12:12,102 | INFO     | [data] queue_monitor thread has finished
[2025-05-19 01:12:22] 2025-05-19 05:12:15,803 | INFO     | job.realtimelogging is not enabled
[2025-05-19 01:12:22] 2025-05-19 05:12:16,808 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-19 01:12:22] 2025-05-19 05:12:17,071 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140616964126528)>', '<ExcThread(monitor, started 140616457500416)>']
[2025-05-19 01:12:22] 2025-05-19 05:12:17,659 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-19 01:12:22] 2025-05-19 05:12:17,659 | INFO     | [monitor] control thread has ended
[2025-05-19 01:12:22] 2025-05-19 05:12:22,092 | INFO     | all workflow threads have been joined
[2025-05-19 01:12:22] 2025-05-19 05:12:22,093 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-19 01:12:22] 2025-05-19 05:12:22,093 | INFO     | traces error code: 0
[2025-05-19 01:12:22] 2025-05-19 05:12:22,093 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-19 01:12:22] 2025-05-19 05:12:22,299 [wrapper] ==== pilot stdout END ====
[2025-05-19 01:12:22] 2025-05-19 05:12:22,302 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-19 01:12:22] 2025-05-19 05:12:22,305 [wrapper] pilotpid: 933600
[2025-05-19 01:12:22] 2025-05-19 05:12:22,307 [wrapper] Pilot exit status: 0
[2025-05-19 01:12:22] 2025-05-19 05:12:22,316 [wrapper] pandaids: 6650329555
[2025-05-19 01:12:22] 2025-05-19 05:12:22,409 [wrapper] cleanup supervisor_pilot 1990022 933601
[2025-05-19 01:12:22] 2025-05-19 05:12:22,412 [wrapper] Test setup, not cleaning
[2025-05-19 01:12:22] 2025-05-19 05:12:22,414 [wrapper] apfmon messages muted
[2025-05-19 01:12:22] 2025-05-19 05:12:22,417 [wrapper] ==== wrapper stdout END ====
[2025-05-19 01:12:22] 2025-05-19 05:12:22,419 [wrapper] ==== wrapper stderr END ====
[2025-05-19 01:12:22]  *** Error codes and diagnostics ***
[2025-05-19 01:12:22]     "exeErrorCode": 0,
[2025-05-19 01:12:22]     "exeErrorDiag": "",
[2025-05-19 01:12:22]     "pilotErrorCode": 0,
[2025-05-19 01:12:22]     "pilotErrorDiag": "",
[2025-05-19 01:12:22]  *** Listing of results directory ***
[2025-05-19 01:12:22] total 407796
[2025-05-19 01:12:22] -rw-r--r--. 1 boincer umatlas    495897 May 15 08:31 pilot3.tar.gz
[2025-05-19 01:12:22] -rw-r--r--. 1 boincer umatlas      5111 May 15 08:34 queuedata.json
[2025-05-19 01:12:22] -rwx------. 1 boincer umatlas     37140 May 15 08:35 runpilot2-wrapper.sh
[2025-05-19 01:12:22] -rw-r--r--. 1 boincer umatlas       100 May 18 23:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-19 01:12:22] -rwxr-xr-x. 1 boincer umatlas      7986 May 18 23:44 run_atlas
[2025-05-19 01:12:22] -rw-r--r--. 1 boincer umatlas       105 May 18 23:44 job.xml
[2025-05-19 01:12:22] -rw-r--r--. 2 boincer umatlas 220486159 May 18 23:44 EVNT.44638096._001533.pool.root.1
[2025-05-19 01:12:22] -rw-r--r--. 2 boincer umatlas     17569 May 18 23:44 start_atlas.sh
[2025-05-19 01:12:22] drwxrwx--x. 2 boincer umatlas      4096 May 18 23:44 shared
[2025-05-19 01:12:22] -rw-r--r--. 2 boincer umatlas    508879 May 18 23:44 input.tar.gz
[2025-05-19 01:12:22] -rw-r--r--. 1 boincer umatlas         0 May 18 23:44 boinc_lockfile
[2025-05-19 01:12:22] -rw-r--r--. 1 boincer umatlas      2538 May 18 23:44 pandaJob.out
[2025-05-19 01:12:22] -rw-------. 1 boincer umatlas       467 May 18 23:44 setup.sh.local
[2025-05-19 01:12:22] -rw-------. 1 boincer umatlas    994637 May 18 23:44 agis_schedconf.cvmfs.json
[2025-05-19 01:12:22] -rw-------. 1 boincer umatlas   1596741 May 18 23:44 agis_ddmendpoints.agis.ALL.json
[2025-05-19 01:12:22] drwx------. 4 boincer umatlas      4096 May 18 23:44 pilot3
[2025-05-19 01:12:22] -rw-r--r--. 1 boincer umatlas      6865 May 19 01:09 init_data.xml
[2025-05-19 01:12:22] -rw-------. 1 boincer umatlas        95 May 19 01:11 pilot_heartbeat.json
[2025-05-19 01:12:22] -rw-------. 1 boincer umatlas 191609931 May 19 01:11 HITS.44638099._024025.pool.root.1
[2025-05-19 01:12:22] -rw-r--r--. 1 boincer umatlas       529 May 19 01:11 boinc_task_state.xml
[2025-05-19 01:12:22] -rw-------. 1 boincer umatlas      1044 May 19 01:11 memory_monitor_summary.json
[2025-05-19 01:12:22] -rw-------. 1 boincer umatlas    320765 May 19 01:11 log.44638099._024025.job.log.tgz.1
[2025-05-19 01:12:22] -rw-------. 1 boincer umatlas      7727 May 19 01:12 heartbeat.json
[2025-05-19 01:12:22] -rw-r--r--. 1 boincer umatlas      8192 May 19 01:12 boinc_mmap_file
[2025-05-19 01:12:22] -rw-r--r--. 1 boincer umatlas        27 May 19 01:12 wrapper_checkpoint.txt
[2025-05-19 01:12:22] -rw-------. 1 boincer umatlas      4611 May 19 01:12 pilotlog.txt
[2025-05-19 01:12:22] -rw-------. 1 boincer umatlas    504166 May 19 01:12 log.44638099._024025.job.log.1
[2025-05-19 01:12:22] -rw-------. 1 boincer umatlas       357 May 19 01:12 output.list
[2025-05-19 01:12:22] -rw-r--r--. 1 boincer umatlas       620 May 19 01:12 runtime_log
[2025-05-19 01:12:22] -rw-------. 1 boincer umatlas    839680 May 19 01:12 result.tar.gz
[2025-05-19 01:12:22] -rw-r--r--. 1 boincer umatlas     11418 May 19 01:12 runtime_log.err
[2025-05-19 01:12:22] -rw-------. 1 boincer umatlas       651 May 19 01:12 3aHLDmXzmZ7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRKJKDmBCyxLn.diag
[2025-05-19 01:12:22] -rw-r--r--. 1 boincer umatlas     21312 May 19 01:12 stderr.txt
[2025-05-19 01:12:22] HITS file was successfully produced:
[2025-05-19 01:12:22] -rw-------. 1 boincer umatlas 191609931 May 19 01:11 shared/HITS.pool.root.1
[2025-05-19 01:12:22]  *** Contents of shared directory: ***
[2025-05-19 01:12:22] total 403784
[2025-05-19 01:12:22] -rw-r--r--. 2 boincer umatlas 220486159 May 18 23:44 ATLAS.root_0
[2025-05-19 01:12:22] -rw-r--r--. 2 boincer umatlas     17569 May 18 23:44 start_atlas.sh
[2025-05-19 01:12:22] -rw-r--r--. 2 boincer umatlas    508879 May 18 23:44 input.tar.gz
[2025-05-19 01:12:22] -rw-------. 1 boincer umatlas 191609931 May 19 01:11 HITS.pool.root.1
[2025-05-19 01:12:22] -rw-------. 1 boincer umatlas    839680 May 19 01:12 result.tar.gz
01:12:24 (929975): run_atlas exited; CPU time 34905.244028
01:12:24 (929975): called boinc_finish(0)

</stderr_txt>
]]>

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