Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:54:18 (439044): wrapper (7.7.26015): starting
09:54:18 (439044): wrapper: running run_atlas (--nthreads 8)
[2025-05-18 09:54:18] Arguments: --nthreads 8
[2025-05-18 09:54:18] Threads: 8
[2025-05-18 09:54:18] Checking for CVMFS
[2025-05-18 09:54:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-18 09:54:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-18 09:54:18] Running cvmfs_config stat atlas.cern.ch
[2025-05-18 09:54:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-18 09:54:19] 2.12.6.0 338051 93 33288 146137 3 1 29098757 40960000 0 16776704 0 32 97.059 1251 28431 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-18 09:54:19] CVMFS is ok
[2025-05-18 09:54:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-18 09:54:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-18 09:54:19] Further information can be found at the LHC@home message board.
[2025-05-18 09:54:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-18 09:54:19] Checking for apptainer binary...
[2025-05-18 09:54:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-18 09:54:19] Running /usr/bin/apptainer --version
[2025-05-18 09:54:19] apptainer version 1.4.0-1.el9
[2025-05-18 09:54:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-18 09:54:19] c7-11-12.aglt2.org
[2025-05-18 09:54:19] apptainer works
[2025-05-18 09:54:19] Set ATHENA_PROC_NUMBER=8
[2025-05-18 09:54:19] Set ATHENA_CORE_NUMBER=8
[2025-05-18 09:54:19] Starting ATLAS job with PandaID=6653395061
[2025-05-18 09:54:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-18 11:01:48]  *** The last 200 lines of the pilot log: ***
[2025-05-18 11:01:48]  is_tar=False
[2025-05-18 11:01:48]  lfn=log.44638099._051842.job.log.tgz.1
[2025-05-18 11:01:48]  mtime=0
[2025-05-18 11:01:48]  protocol_id=None
[2025-05-18 11:01:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-18 11:01:48]  replicas=None
[2025-05-18 11:01:48]  scope=mc23_13p6TeV
[2025-05-18 11:01:48]  status=None
[2025-05-18 11:01:48]  status_code=0
[2025-05-18 11:01:48]  storage_token=
[2025-05-18 11:01:48]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6653395061/log.44638099._051842.job.log.tgz.1
[2025-05-18 11:01:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/65/log.44638099._051842.job.log.tgz.1
[2025-05-18 11:01:48]  workdir=None
[2025-05-18 11:01:48] ]
[2025-05-18 11:01:48] 2025-05-18 15:01:23,467 | INFO     | transferring file log.44638099._051842.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6653395061/log.44638099._051842.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-05-18 11:01:48] 2025-05-18 15:01:23,467 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6653395061/log.44638099._051842.job.log.tgz.1 /tmp/boinchome/slots/0/log.44638099._051842.job
[2025-05-18 11:01:48] 2025-05-18 15:01:23,481 | INFO     | adding to output.list: log.44638099._051842.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/65/log.44638099._051842.job.log.tg
[2025-05-18 11:01:48] 2025-05-18 15:01:23,481 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-18 11:01:48] 2025-05-18 15:01:23,481 | INFO     | summary of transferred files:
[2025-05-18 11:01:48] 2025-05-18 15:01:23,481 | INFO     |  -- lfn=log.44638099._051842.job.log.tgz.1, status_code=0, status=transferred
[2025-05-18 11:01:48] 2025-05-18 15:01:23,481 | INFO     | stage-out finished correctly
[2025-05-18 11:01:48] 2025-05-18 15:01:24,229 | INFO     | monitor loop #304: job 0:6653395061 is in state 'finished'
[2025-05-18 11:01:48] 2025-05-18 15:01:24,229 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-18 11:01:48] 2025-05-18 15:01:25,441 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-18 11:01:48] 2025-05-18 15:01:26,588 | INFO     | job 6653395061 has state=finished
[2025-05-18 11:01:48] 2025-05-18 15:01:26,588 | INFO     | preparing for final server update for job 6653395061 in state='finished'
[2025-05-18 11:01:48] 2025-05-18 15:01:26,588 | INFO     | this job has now completed (state=finished)
[2025-05-18 11:01:48] 2025-05-18 15:01:26,588 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-18 11:01:48] 2025-05-18 15:01:26,588 | INFO     | log transfer has been attempted: DONE
[2025-05-18 11:01:48] 2025-05-18 15:01:26,588 | INFO     | job 6653395061 has finished - writing final server update
[2025-05-18 11:01:48] 2025-05-18 15:01:26,589 | INFO     | total number of processed events: 400 (read)
[2025-05-18 11:01:48] 2025-05-18 15:01:26,603 | INFO     | executing command: lscpu
[2025-05-18 11:01:48] 2025-05-18 15:01:26,652 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-18 11:01:48] 2025-05-18 15:01:26,732 | INFO     | monitor loop #305: job 0:6653395061 is in state 'finished'
[2025-05-18 11:01:48] 2025-05-18 15:01:26,732 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-18 11:01:48] 2025-05-18 15:01:29,235 | INFO     | monitor loop #306: job 0:6653395061 is in state 'finished'
[2025-05-18 11:01:48] 2025-05-18 15:01:29,235 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-18 11:01:48] 2025-05-18 15:01:29,555 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-18 11:01:48] 2025-05-18 15:01:29,555 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6653395061/memory_monitor_summary.json (trf name=prmon)
[2025-05-18 11:01:48] 2025-05-18 15:01:29,556 | INFO     | extracted standard info from prmon json
[2025-05-18 11:01:48] 2025-05-18 15:01:29,556 | INFO     | extracted standard memory fields from prmon json
[2025-05-18 11:01:48] 2025-05-18 15:01:29,556 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-18 11:01:48] 2025-05-18 15:01:29,556 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-18 11:01:48] 2025-05-18 15:01:29,556 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-18 11:01:48] 2025-05-18 15:01:29,557 | INFO     | fitting pss+swap vs Time
[2025-05-18 11:01:48] 2025-05-18 15:01:29,557 | INFO     | sum of square deviations: 63666310.0
[2025-05-18 11:01:48] 2025-05-18 15:01:29,558 | INFO     | sum of deviations: 9278441417.0
[2025-05-18 11:01:48] 2025-05-18 15:01:29,558 | INFO     | mean x: 1747578563.0
[2025-05-18 11:01:48] 2025-05-18 15:01:29,558 | INFO     | mean y: 2157694.7118644067
[2025-05-18 11:01:48] 2025-05-18 15:01:29,558 | INFO     | -- intersect: -254682075118.53812
[2025-05-18 11:01:48] 2025-05-18 15:01:29,558 | INFO     | intersect: -254682075118.53812
[2025-05-18 11:01:48] 2025-05-18 15:01:29,558 | INFO     | chi2: 0.8863891789786386
[2025-05-18 11:01:48] 2025-05-18 15:01:29,558 | INFO     | -- intersect: -254682075118.53812
[2025-05-18 11:01:48] 2025-05-18 15:01:29,558 | INFO     | current memory leak: 145.74 B/s (using 59 data points, chi2=0.89)
[2025-05-18 11:01:48] 2025-05-18 15:01:29,558 | INFO     | ..............................
[2025-05-18 11:01:48] 2025-05-18 15:01:29,558 | INFO     | . Timing measurements:
[2025-05-18 11:01:48] 2025-05-18 15:01:29,558 | INFO     | . get job = 0 s
[2025-05-18 11:01:48] 2025-05-18 15:01:29,558 | INFO     | . initial setup = 2 s
[2025-05-18 11:01:48] 2025-05-18 15:01:29,558 | INFO     | . payload setup = 3 s
[2025-05-18 11:01:48] 2025-05-18 15:01:29,558 | INFO     | . stage-in = 0 s
[2025-05-18 11:01:48] 2025-05-18 15:01:29,558 | INFO     | . payload execution = 3994 s
[2025-05-18 11:01:48] 2025-05-18 15:01:29,558 | INFO     | . stage-out = 0 s
[2025-05-18 11:01:48] 2025-05-18 15:01:29,558 | INFO     | . log creation = 0 s
[2025-05-18 11:01:48] 2025-05-18 15:01:29,559 | INFO     | ..............................
[2025-05-18 11:01:48] 2025-05-18 15:01:29,613 | INFO     | 
[2025-05-18 11:01:48] 2025-05-18 15:01:29,613 | INFO     | job summary report
[2025-05-18 11:01:48] 2025-05-18 15:01:29,613 | INFO     | --------------------------------------------------
[2025-05-18 11:01:48] 2025-05-18 15:01:29,613 | INFO     | PanDA job id: 6653395061
[2025-05-18 11:01:48] 2025-05-18 15:01:29,613 | INFO     | task id: 44638099
[2025-05-18 11:01:48] 2025-05-18 15:01:29,613 | INFO     | errors: (none)
[2025-05-18 11:01:48] 2025-05-18 15:01:29,613 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-18 11:01:48] 2025-05-18 15:01:29,613 | INFO     | pilot state: finished 
[2025-05-18 11:01:48] 2025-05-18 15:01:29,613 | INFO     | transexitcode: 0
[2025-05-18 11:01:48] 2025-05-18 15:01:29,613 | INFO     | exeerrorcode: 0
[2025-05-18 11:01:48] 2025-05-18 15:01:29,613 | INFO     | exeerrordiag: 
[2025-05-18 11:01:48] 2025-05-18 15:01:29,614 | INFO     | exitcode: 0
[2025-05-18 11:01:48] 2025-05-18 15:01:29,614 | INFO     | exitmsg: OK
[2025-05-18 11:01:48] 2025-05-18 15:01:29,614 | INFO     | cpuconsumptiontime: 25297 s
[2025-05-18 11:01:48] 2025-05-18 15:01:29,614 | INFO     | nevents: 400
[2025-05-18 11:01:48] 2025-05-18 15:01:29,614 | INFO     | neventsw: 0
[2025-05-18 11:01:48] 2025-05-18 15:01:29,614 | INFO     | pid: 449555
[2025-05-18 11:01:48] 2025-05-18 15:01:29,614 | INFO     | pgrp: 449555
[2025-05-18 11:01:48] 2025-05-18 15:01:29,614 | INFO     | corecount: 8
[2025-05-18 11:01:48] 2025-05-18 15:01:29,614 | INFO     | event service: False
[2025-05-18 11:01:48] 2025-05-18 15:01:29,614 | INFO     | sizes: {0: 2393713, 3: 2393919, 11: 2393947, 4002: 2428764, 4004: 2428764, 4009: 2428934}
[2025-05-18 11:01:48] 2025-05-18 15:01:29,614 | INFO     | --------------------------------------------------
[2025-05-18 11:01:48] 2025-05-18 15:01:29,614 | INFO     | 
[2025-05-18 11:01:48] 2025-05-18 15:01:29,614 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-18 11:01:48] 2025-05-18 15:01:29,628 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-18 11:01:48] 2025-05-18 15:01:29,628 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-18 11:01:48] 2025-05-18 15:01:29,628 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-18 11:01:48] 2025-05-18 15:01:29,628 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-18 11:01:48] 2025-05-18 15:01:29,628 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-18 11:01:48] 2025-05-18 15:01:29,628 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-18 11:01:48] 2025-05-18 15:01:29,628 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-18 11:01:48] 2025-05-18 15:01:29,628 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-18 11:01:48] 2025-05-18 15:01:29,628 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-18 11:01:48] 2025-05-18 15:01:29,628 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-18 11:01:48] 2025-05-18 15:01:29,628 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-18 11:01:48] 2025-05-18 15:01:29,629 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-18 11:01:48] 2025-05-18 15:01:29,629 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-18 11:01:48] 2025-05-18 15:01:29,629 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-18 11:01:48] 2025-05-18 15:01:29,629 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-18 11:01:48] 2025-05-18 15:01:29,629 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-18 11:01:48] 2025-05-18 15:01:29,629 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-18 11:01:48] 2025-05-18 15:01:29,629 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-18 11:01:48] 2025-05-18 15:01:29,629 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-18 11:01:48] 2025-05-18 15:01:29,629 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-18 11:01:48] 2025-05-18 15:01:29,629 | INFO     | job 6653395061 has completed (purged errors)
[2025-05-18 11:01:48] 2025-05-18 15:01:29,629 | INFO     | overall cleanup function is called
[2025-05-18 11:01:48] 2025-05-18 15:01:30,637 | INFO     | --- collectZombieJob: --- 10, [449555]
[2025-05-18 11:01:48] 2025-05-18 15:01:30,637 | INFO     | zombie collector waiting for pid 449555
[2025-05-18 11:01:48] 2025-05-18 15:01:30,637 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-18 11:01:48] 2025-05-18 15:01:30,637 | INFO     | collected zombie processes
[2025-05-18 11:01:48] 2025-05-18 15:01:30,637 | INFO     | will attempt to kill all subprocesses of pid=449555
[2025-05-18 11:01:48] 2025-05-18 15:01:30,796 | INFO     | process IDs to be killed: [449555] (in reverse order)
[2025-05-18 11:01:48] 2025-05-18 15:01:30,859 | WARNING  | found no corresponding commands to process id(s)
[2025-05-18 11:01:48] 2025-05-18 15:01:30,859 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-18 11:01:48] 2025-05-18 15:01:30,866 | INFO     | did not find any defunct processes belonging to 449555
[2025-05-18 11:01:48] 2025-05-18 15:01:30,872 | INFO     | did not find any defunct processes belonging to 449555
[2025-05-18 11:01:48] 2025-05-18 15:01:30,872 | INFO     | ready for new job
[2025-05-18 11:01:48] 2025-05-18 15:01:30,872 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-18 11:01:48] 2025-05-18 15:01:30,873 | INFO     | **************************************
[2025-05-18 11:01:48] 2025-05-18 15:01:30,873 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-18 11:01:48] 2025-05-18 15:01:30,873 | INFO     | **************************************
[2025-05-18 11:01:48] 2025-05-18 15:01:30,873 | INFO     | 
[2025-05-18 11:01:48] 2025-05-18 15:01:30,887 | INFO     | architecture information:
[2025-05-18 11:01:48] 2025-05-18 15:01:30,887 | INFO     | executing command: cat /etc/os-release
[2025-05-18 11:01:48] 2025-05-18 15:01:30,898 | INFO     | cat /etc/os-release:
[2025-05-18 11:01:48] NAME="CentOS Linux"
[2025-05-18 11:01:48] VERSION="7 (Core)"
[2025-05-18 11:01:48] ID="centos"
[2025-05-18 11:01:48] ID_LIKE="rhel fedora"
[2025-05-18 11:01:48] VERSION_ID="7"
[2025-05-18 11:01:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-18 11:01:48] ANSI_COLOR="0;31"
[2025-05-18 11:01:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-18 11:01:48] HOME_URL="https://www.centos.org/"
[2025-05-18 11:01:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-18 11:01:48] 
[2025-05-18 11:01:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-18 11:01:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-18 11:01:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-18 11:01:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-18 11:01:48] 
[2025-05-18 11:01:48] 2025-05-18 15:01:30,898 | INFO     | **************************************
[2025-05-18 11:01:48] 2025-05-18 15:01:31,401 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-18 11:01:48] 2025-05-18 15:01:31,411 | INFO     | sufficient remaining disk space (86505422848 B)
[2025-05-18 11:01:48] 2025-05-18 15:01:31,411 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-18 11:01:48] 2025-05-18 15:01:31,411 | INFO     | current server update state: UPDATING_FINAL
[2025-05-18 11:01:48] 2025-05-18 15:01:31,411 | INFO     | update_server=False
[2025-05-18 11:01:48] 2025-05-18 15:01:31,411 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-18 11:01:48] 2025-05-18 15:01:31,411 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-18 11:01:48] 2025-05-18 15:01:31,412 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-18 11:01:48] 2025-05-18 15:01:31,412 | INFO     | found 0 job(s) in 20 queues
[2025-05-18 11:01:48] 2025-05-18 15:01:31,412 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-18 11:01:48] 2025-05-18 15:01:31,412 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-18 11:01:48] 2025-05-18 15:01:31,500 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-18 11:01:48] 2025-05-18 15:01:31,544 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-18 11:01:48] 2025-05-18 15:01:31,738 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-18 11:01:48] 2025-05-18 15:01:31,738 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-18 11:01:48] 2025-05-18 15:01:31,738 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-18 11:01:48] 2025-05-18 15:01:31,738 | INFO     | will abort loop
[2025-05-18 11:01:48] 2025-05-18 15:01:31,849 | INFO     | all payload control threads have been joined
[2025-05-18 11:01:48] 2025-05-18 15:01:31,879 | INFO     | all job control threads have been joined
[2025-05-18 11:01:48] 2025-05-18 15:01:32,407 | INFO     | all data control threads have been joined
[2025-05-18 11:01:48] 2025-05-18 15:01:32,416 | INFO     | [job] retrieve thread has finished
[2025-05-18 11:01:48] 2025-05-18 15:01:32,417 | INFO     | [job] queue monitor thread has finished
[2025-05-18 11:01:48] 2025-05-18 15:01:32,530 | INFO     | [data] copytool_in thread has finished
[2025-05-18 11:01:48] 2025-05-18 15:01:32,724 | INFO     | [payload] failed_post thread has finished
[2025-05-18 11:01:48] 2025-05-18 15:01:32,743 | INFO     | [job] job monitor thread has finished
[2025-05-18 11:01:48] 2025-05-18 15:01:32,854 | INFO     | [payload] control thread has finished
[2025-05-18 11:01:48] 2025-05-18 15:01:32,884 | INFO     | [job] control thread has finished
[2025-05-18 11:01:48] 2025-05-18 15:01:32,992 | INFO     | [payload] execute_payloads thread has finished
[2025-05-18 11:01:48] 2025-05-18 15:01:33,412 | INFO     | [data] control thread has finished
[2025-05-18 11:01:48] 2025-05-18 15:01:33,517 | INFO     | [job] validate thread has finished
[2025-05-18 11:01:48] 2025-05-18 15:01:33,550 | INFO     | [data] copytool_out thread has finished
[2025-05-18 11:01:48] 2025-05-18 15:01:33,630 | INFO     | [job] create_data_payload thread has finished
[2025-05-18 11:01:48] 2025-05-18 15:01:33,652 | INFO     | [payload] validate_post thread has finished
[2025-05-18 11:01:48] 2025-05-18 15:01:33,789 | INFO     | [payload] validate_pre thread has finished
[2025-05-18 11:01:48] 2025-05-18 15:01:35,506 | INFO     | [data] queue_monitor thread has finished
[2025-05-18 11:01:48] 2025-05-18 15:01:41,711 | INFO     | job.realtimelogging is not enabled
[2025-05-18 11:01:48] 2025-05-18 15:01:42,716 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-18 11:01:48] 2025-05-18 15:01:43,329 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140635834812224)>', '<ExcThread(monitor, started 140635214444288)>']
[2025-05-18 11:01:48] 2025-05-18 15:01:43,473 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-18 11:01:48] 2025-05-18 15:01:43,473 | INFO     | [monitor] control thread has ended
[2025-05-18 11:01:48] 2025-05-18 15:01:48,354 | INFO     | all workflow threads have been joined
[2025-05-18 11:01:48] 2025-05-18 15:01:48,354 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-18 11:01:48] 2025-05-18 15:01:48,354 | INFO     | traces error code: 0
[2025-05-18 11:01:48] 2025-05-18 15:01:48,354 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-18 11:01:48] 2025-05-18 15:01:48,426 [wrapper] ==== pilot stdout END ====
[2025-05-18 11:01:48] 2025-05-18 15:01:48,428 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-18 11:01:48] 2025-05-18 15:01:48,430 [wrapper] pilotpid: 442671
[2025-05-18 11:01:48] 2025-05-18 15:01:48,432 [wrapper] Pilot exit status: 0
[2025-05-18 11:01:48] 2025-05-18 15:01:48,441 [wrapper] pandaids: 6653395061
[2025-05-18 11:01:48] 2025-05-18 15:01:48,488 [wrapper] cleanup supervisor_pilot  523304 442672
[2025-05-18 11:01:48] 2025-05-18 15:01:48,490 [wrapper] Test setup, not cleaning
[2025-05-18 11:01:48] 2025-05-18 15:01:48,492 [wrapper] apfmon messages muted
[2025-05-18 11:01:48] 2025-05-18 15:01:48,494 [wrapper] ==== wrapper stdout END ====
[2025-05-18 11:01:48] 2025-05-18 15:01:48,496 [wrapper] ==== wrapper stderr END ====
[2025-05-18 11:01:48]  *** Error codes and diagnostics ***
[2025-05-18 11:01:48]     "exeErrorCode": 0,
[2025-05-18 11:01:48]     "exeErrorDiag": "",
[2025-05-18 11:01:48]     "pilotErrorCode": 0,
[2025-05-18 11:01:48]     "pilotErrorDiag": "",
[2025-05-18 11:01:48]  *** Listing of results directory ***
[2025-05-18 11:01:48] total 411012
[2025-05-18 11:01:48] -rw-r--r--. 1 boincer umatlas    495897 May 17 02:57 pilot3.tar.gz
[2025-05-18 11:01:48] -rw-r--r--. 1 boincer umatlas      5111 May 17 03:09 queuedata.json
[2025-05-18 11:01:48] -rwx------. 1 boincer umatlas     37140 May 17 03:09 runpilot2-wrapper.sh
[2025-05-18 11:01:48] -rw-r--r--. 1 boincer umatlas       100 May 18 09:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-18 11:01:48] -rwxr-xr-x. 1 boincer umatlas      7986 May 18 09:54 run_atlas
[2025-05-18 11:01:48] -rw-r--r--. 1 boincer umatlas       105 May 18 09:54 job.xml
[2025-05-18 11:01:48] -rw-r--r--. 2 boincer umatlas 223043499 May 18 09:54 EVNT.44638096._002072.pool.root.1
[2025-05-18 11:01:48] -rw-r--r--. 2 boincer umatlas     17569 May 18 09:54 start_atlas.sh
[2025-05-18 11:01:48] drwxrwx--x. 2 boincer umatlas      4096 May 18 09:54 shared
[2025-05-18 11:01:48] -rw-r--r--. 2 boincer umatlas    508881 May 18 09:54 input.tar.gz
[2025-05-18 11:01:48] -rw-r--r--. 1 boincer umatlas         0 May 18 09:54 boinc_lockfile
[2025-05-18 11:01:48] -rw-r--r--. 1 boincer umatlas      2540 May 18 09:54 pandaJob.out
[2025-05-18 11:01:48] -rw-------. 1 boincer umatlas       467 May 18 09:54 setup.sh.local
[2025-05-18 11:01:48] -rw-------. 1 boincer umatlas    994643 May 18 09:54 agis_schedconf.cvmfs.json
[2025-05-18 11:01:48] -rw-------. 1 boincer umatlas   1596741 May 18 09:54 agis_ddmendpoints.agis.ALL.json
[2025-05-18 11:01:48] drwx------. 4 boincer umatlas      4096 May 18 09:54 pilot3
[2025-05-18 11:01:48] -rw-r--r--. 1 boincer umatlas      6898 May 18 10:57 init_data.xml
[2025-05-18 11:01:48] -rw-------. 1 boincer umatlas 192599562 May 18 11:00 HITS.44638099._051842.pool.root.1
[2025-05-18 11:01:48] -rw-r--r--. 1 boincer umatlas       529 May 18 11:01 boinc_task_state.xml
[2025-05-18 11:01:48] -rw-------. 1 boincer umatlas        95 May 18 11:01 pilot_heartbeat.json
[2025-05-18 11:01:48] -rw-------. 1 boincer umatlas      1017 May 18 11:01 memory_monitor_summary.json
[2025-05-18 11:01:48] -rw-------. 1 boincer umatlas    298899 May 18 11:01 log.44638099._051842.job.log.tgz.1
[2025-05-18 11:01:48] -rw-------. 1 boincer umatlas      7678 May 18 11:01 heartbeat.json
[2025-05-18 11:01:48] -rw-r--r--. 1 boincer umatlas      8192 May 18 11:01 boinc_mmap_file
[2025-05-18 11:01:48] -rw-r--r--. 1 boincer umatlas        27 May 18 11:01 wrapper_checkpoint.txt
[2025-05-18 11:01:48] -rw-------. 1 boincer umatlas      4734 May 18 11:01 pilotlog.txt
[2025-05-18 11:01:48] -rw-------. 1 boincer umatlas    395965 May 18 11:01 log.44638099._051842.job.log.1
[2025-05-18 11:01:48] -rw-------. 1 boincer umatlas       357 May 18 11:01 output.list
[2025-05-18 11:01:48] -rw-r--r--. 1 boincer umatlas       620 May 18 11:01 runtime_log
[2025-05-18 11:01:48] -rw-------. 1 boincer umatlas    716800 May 18 11:01 result.tar.gz
[2025-05-18 11:01:48] -rw-r--r--. 1 boincer umatlas     11418 May 18 11:01 runtime_log.err
[2025-05-18 11:01:48] -rw-------. 1 boincer umatlas       651 May 18 11:01 KEqNDmArQa7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsyNKDmybK4Do.diag
[2025-05-18 11:01:48] -rw-r--r--. 1 boincer umatlas     21429 May 18 11:01 stderr.txt
[2025-05-18 11:01:48] HITS file was successfully produced:
[2025-05-18 11:01:48] -rw-------. 1 boincer umatlas 192599562 May 18 11:00 shared/HITS.pool.root.1
[2025-05-18 11:01:48]  *** Contents of shared directory: ***
[2025-05-18 11:01:48] total 407132
[2025-05-18 11:01:48] -rw-r--r--. 2 boincer umatlas 223043499 May 18 09:54 ATLAS.root_0
[2025-05-18 11:01:48] -rw-r--r--. 2 boincer umatlas     17569 May 18 09:54 start_atlas.sh
[2025-05-18 11:01:48] -rw-r--r--. 2 boincer umatlas    508881 May 18 09:54 input.tar.gz
[2025-05-18 11:01:48] -rw-------. 1 boincer umatlas 192599562 May 18 11:00 HITS.pool.root.1
[2025-05-18 11:01:48] -rw-------. 1 boincer umatlas    716800 May 18 11:01 result.tar.gz
11:01:50 (439044): run_atlas exited; CPU time 25324.818818
11:01:50 (439044): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN