Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:14:15 (2412698): wrapper (7.7.26015): starting
04:14:15 (2412698): wrapper: running run_atlas (--nthreads 8)
[2025-05-18 04:14:15] Arguments: --nthreads 8
[2025-05-18 04:14:15] Threads: 8
[2025-05-18 04:14:15] Checking for CVMFS
[2025-05-18 04:14:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-18 04:14:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-18 04:14:15] Running cvmfs_config stat atlas.cern.ch
[2025-05-18 04:14:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-18 04:14:15] 2.12.6.0 10250 6669 244056 146129 2 13 18253716 32935936 10907 16776704 1 28481499 99.624 28353103 27861 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-18 04:14:15] CVMFS is ok
[2025-05-18 04:14:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-18 04:14:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-18 04:14:15] Further information can be found at the LHC@home message board.
[2025-05-18 04:14:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-18 04:14:15] Checking for apptainer binary...
[2025-05-18 04:14:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-18 04:14:15] Running /usr/bin/apptainer --version
[2025-05-18 04:14:15] apptainer version 1.4.0-1.el9
[2025-05-18 04:14:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-18 04:14:15] c6-12-29-2.aglt2.org
[2025-05-18 04:14:15] apptainer works
[2025-05-18 04:14:15] Set ATHENA_PROC_NUMBER=8
[2025-05-18 04:14:15] Set ATHENA_CORE_NUMBER=8
[2025-05-18 04:14:15] Starting ATLAS job with PandaID=6656815057
[2025-05-18 04:14:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-18 05:26:48]  *** The last 200 lines of the pilot log: ***
[2025-05-18 05:26:48]  filetype=log
[2025-05-18 05:26:48]  guid=ee1f9757-4963-4d0a-ab22-83d1e6604f67
[2025-05-18 05:26:48]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-18 05:26:48]  is_altstaged=None
[2025-05-18 05:26:48]  is_tar=False
[2025-05-18 05:26:48]  lfn=log.44638099._057547.job.log.tgz.1
[2025-05-18 05:26:48]  mtime=0
[2025-05-18 05:26:48]  protocol_id=None
[2025-05-18 05:26:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-18 05:26:48]  replicas=None
[2025-05-18 05:26:48]  scope=mc23_13p6TeV
[2025-05-18 05:26:48]  status=None
[2025-05-18 05:26:48]  status_code=0
[2025-05-18 05:26:48]  storage_token=
[2025-05-18 05:26:48]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6656815057/log.44638099._057547.job.log.tgz.1
[2025-05-18 05:26:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9f/79/log.44638099._057547.job.log.tgz.1
[2025-05-18 05:26:48]  workdir=None
[2025-05-18 05:26:48] ]
[2025-05-18 05:26:48] 2025-05-18 09:26:31,061 | INFO     | transferring file log.44638099._057547.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6656815057/log.44638099._057547.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-05-18 05:26:48] 2025-05-18 09:26:31,061 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6656815057/log.44638099._057547.job.log.tgz.1 /tmp/boinchome/slots/0/log.44638099._057547.job
[2025-05-18 05:26:48] 2025-05-18 09:26:31,072 | INFO     | adding to output.list: log.44638099._057547.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9f/79/log.44638099._057547.job.log.tg
[2025-05-18 05:26:48] 2025-05-18 09:26:31,072 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-18 05:26:48] 2025-05-18 09:26:31,073 | INFO     | summary of transferred files:
[2025-05-18 05:26:48] 2025-05-18 09:26:31,073 | INFO     |  -- lfn=log.44638099._057547.job.log.tgz.1, status_code=0, status=transferred
[2025-05-18 05:26:48] 2025-05-18 09:26:31,073 | INFO     | stage-out finished correctly
[2025-05-18 05:26:48] 2025-05-18 09:26:31,796 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-18 05:26:48] 2025-05-18 09:26:32,916 | WARNING  | process 2424607 can no longer be monitored (due to stat problems) - aborting
[2025-05-18 05:26:48] 2025-05-18 09:26:32,916 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6656815057/memory_monitor_summary.json (trf name=prmon)
[2025-05-18 05:26:48] 2025-05-18 09:26:33,071 | INFO     | number of running child processes to parent process 2424607: 1
[2025-05-18 05:26:48] 2025-05-18 09:26:33,071 | INFO     | maximum number of monitored processes: 6
[2025-05-18 05:26:48] 2025-05-18 09:26:34,346 | INFO     | job 6656815057 has state=finished
[2025-05-18 05:26:48] 2025-05-18 09:26:34,346 | INFO     | preparing for final server update for job 6656815057 in state='finished'
[2025-05-18 05:26:48] 2025-05-18 09:26:34,346 | INFO     | this job has now completed (state=finished)
[2025-05-18 05:26:48] 2025-05-18 09:26:34,346 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-18 05:26:48] 2025-05-18 09:26:34,346 | INFO     | log transfer has been attempted: DONE
[2025-05-18 05:26:48] 2025-05-18 09:26:34,346 | INFO     | job 6656815057 has finished - writing final server update
[2025-05-18 05:26:48] 2025-05-18 09:26:34,347 | INFO     | total number of processed events: 400 (read)
[2025-05-18 05:26:48] 2025-05-18 09:26:34,363 | INFO     | executing command: lscpu
[2025-05-18 05:26:48] 2025-05-18 09:26:34,430 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-18 05:26:48] 2025-05-18 09:26:35,573 | INFO     | monitor loop #328: job 0:6656815057 is in state 'finished'
[2025-05-18 05:26:48] 2025-05-18 09:26:35,574 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-18 05:26:48] 2025-05-18 09:26:36,402 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-18 05:26:48] 2025-05-18 09:26:36,402 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6656815057/memory_monitor_summary.json (trf name=prmon)
[2025-05-18 05:26:48] 2025-05-18 09:26:36,402 | INFO     | extracted standard info from prmon json
[2025-05-18 05:26:48] 2025-05-18 09:26:36,402 | INFO     | extracted standard memory fields from prmon json
[2025-05-18 05:26:48] 2025-05-18 09:26:36,402 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-18 05:26:48] 2025-05-18 09:26:36,403 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-18 05:26:48] 2025-05-18 09:26:36,403 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-18 05:26:48] 2025-05-18 09:26:36,404 | INFO     | fitting pss+swap vs Time
[2025-05-18 05:26:48] 2025-05-18 09:26:36,404 | INFO     | sum of square deviations: 81266640.0
[2025-05-18 05:26:48] 2025-05-18 09:26:36,404 | INFO     | sum of deviations: 11038216905.5
[2025-05-18 05:26:48] 2025-05-18 09:26:36,404 | INFO     | mean x: 1747558308.5
[2025-05-18 05:26:48] 2025-05-18 09:26:36,404 | INFO     | mean y: 2416798.546875
[2025-05-18 05:26:48] 2025-05-18 09:26:36,404 | INFO     | -- intersect: -237363464997.86655
[2025-05-18 05:26:48] 2025-05-18 09:26:36,404 | INFO     | intersect: -237363464997.86655
[2025-05-18 05:26:48] 2025-05-18 09:26:36,404 | INFO     | chi2: 1.6687730301765236
[2025-05-18 05:26:48] 2025-05-18 09:26:36,404 | INFO     | -- intersect: -237363464997.86655
[2025-05-18 05:26:48] 2025-05-18 09:26:36,404 | INFO     | current memory leak: 135.83 B/s (using 64 data points, chi2=1.67)
[2025-05-18 05:26:48] 2025-05-18 09:26:36,405 | INFO     | ..............................
[2025-05-18 05:26:48] 2025-05-18 09:26:36,405 | INFO     | . Timing measurements:
[2025-05-18 05:26:48] 2025-05-18 09:26:36,405 | INFO     | . get job = 0 s
[2025-05-18 05:26:48] 2025-05-18 09:26:36,405 | INFO     | . initial setup = 2 s
[2025-05-18 05:26:48] 2025-05-18 09:26:36,405 | INFO     | . payload setup = 3 s
[2025-05-18 05:26:48] 2025-05-18 09:26:36,405 | INFO     | . stage-in = 0 s
[2025-05-18 05:26:48] 2025-05-18 09:26:36,405 | INFO     | . payload execution = 4306 s
[2025-05-18 05:26:48] 2025-05-18 09:26:36,405 | INFO     | . stage-out = 0 s
[2025-05-18 05:26:48] 2025-05-18 09:26:36,405 | INFO     | . log creation = 0 s
[2025-05-18 05:26:48] 2025-05-18 09:26:36,405 | INFO     | ..............................
[2025-05-18 05:26:48] 2025-05-18 09:26:36,451 | INFO     | 
[2025-05-18 05:26:48] 2025-05-18 09:26:36,452 | INFO     | job summary report
[2025-05-18 05:26:48] 2025-05-18 09:26:36,452 | INFO     | --------------------------------------------------
[2025-05-18 05:26:48] 2025-05-18 09:26:36,452 | INFO     | PanDA job id: 6656815057
[2025-05-18 05:26:48] 2025-05-18 09:26:36,452 | INFO     | task id: 44638099
[2025-05-18 05:26:48] 2025-05-18 09:26:36,452 | INFO     | errors: (none)
[2025-05-18 05:26:48] 2025-05-18 09:26:36,452 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-18 05:26:48] 2025-05-18 09:26:36,452 | INFO     | pilot state: finished 
[2025-05-18 05:26:48] 2025-05-18 09:26:36,452 | INFO     | transexitcode: 0
[2025-05-18 05:26:48] 2025-05-18 09:26:36,452 | INFO     | exeerrorcode: 0
[2025-05-18 05:26:48] 2025-05-18 09:26:36,452 | INFO     | exeerrordiag: 
[2025-05-18 05:26:48] 2025-05-18 09:26:36,452 | INFO     | exitcode: 0
[2025-05-18 05:26:48] 2025-05-18 09:26:36,452 | INFO     | exitmsg: OK
[2025-05-18 05:26:48] 2025-05-18 09:26:36,452 | INFO     | cpuconsumptiontime: 27080 s
[2025-05-18 05:26:48] 2025-05-18 09:26:36,452 | INFO     | nevents: 400
[2025-05-18 05:26:48] 2025-05-18 09:26:36,452 | INFO     | neventsw: 0
[2025-05-18 05:26:48] 2025-05-18 09:26:36,452 | INFO     | pid: 2424607
[2025-05-18 05:26:48] 2025-05-18 09:26:36,452 | INFO     | pgrp: 2424607
[2025-05-18 05:26:48] 2025-05-18 09:26:36,452 | INFO     | corecount: 8
[2025-05-18 05:26:48] 2025-05-18 09:26:36,452 | INFO     | event service: False
[2025-05-18 05:26:48] 2025-05-18 09:26:36,452 | INFO     | sizes: {0: 2393662, 2: 2393868, 11: 2393896, 4313: 2419900, 4315: 2428841, 4316: 2428897, 4321: 2429195}
[2025-05-18 05:26:48] 2025-05-18 09:26:36,452 | INFO     | --------------------------------------------------
[2025-05-18 05:26:48] 2025-05-18 09:26:36,452 | INFO     | 
[2025-05-18 05:26:48] 2025-05-18 09:26:36,452 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-18 05:26:48] 2025-05-18 09:26:36,463 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-18 05:26:48] 2025-05-18 09:26:36,463 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-18 05:26:48] 2025-05-18 09:26:36,463 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-18 05:26:48] 2025-05-18 09:26:36,463 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-18 05:26:48] 2025-05-18 09:26:36,463 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-18 05:26:48] 2025-05-18 09:26:36,463 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-18 05:26:48] 2025-05-18 09:26:36,463 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-18 05:26:48] 2025-05-18 09:26:36,464 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-18 05:26:48] 2025-05-18 09:26:36,464 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-18 05:26:48] 2025-05-18 09:26:36,464 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-18 05:26:48] 2025-05-18 09:26:36,464 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-18 05:26:48] 2025-05-18 09:26:36,464 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-18 05:26:48] 2025-05-18 09:26:36,464 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-18 05:26:48] 2025-05-18 09:26:36,464 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-18 05:26:48] 2025-05-18 09:26:36,464 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-18 05:26:48] 2025-05-18 09:26:36,464 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-18 05:26:48] 2025-05-18 09:26:36,464 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-18 05:26:48] 2025-05-18 09:26:36,464 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-18 05:26:48] 2025-05-18 09:26:36,464 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-18 05:26:48] 2025-05-18 09:26:36,464 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-18 05:26:48] 2025-05-18 09:26:36,464 | INFO     | job 6656815057 has completed (purged errors)
[2025-05-18 05:26:48] 2025-05-18 09:26:36,464 | INFO     | overall cleanup function is called
[2025-05-18 05:26:48] 2025-05-18 09:26:37,471 | INFO     | --- collectZombieJob: --- 10, [2424607]
[2025-05-18 05:26:48] 2025-05-18 09:26:37,471 | INFO     | zombie collector waiting for pid 2424607
[2025-05-18 05:26:48] 2025-05-18 09:26:37,471 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-18 05:26:48] 2025-05-18 09:26:37,471 | INFO     | collected zombie processes
[2025-05-18 05:26:48] 2025-05-18 09:26:37,471 | INFO     | will attempt to kill all subprocesses of pid=2424607
[2025-05-18 05:26:48] 2025-05-18 09:26:37,626 | INFO     | process IDs to be killed: [2424607] (in reverse order)
[2025-05-18 05:26:48] 2025-05-18 09:26:37,676 | WARNING  | found no corresponding commands to process id(s)
[2025-05-18 05:26:48] 2025-05-18 09:26:37,676 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-18 05:26:48] 2025-05-18 09:26:37,686 | INFO     | did not find any defunct processes belonging to 2424607
[2025-05-18 05:26:48] 2025-05-18 09:26:37,696 | INFO     | did not find any defunct processes belonging to 2424607
[2025-05-18 05:26:48] 2025-05-18 09:26:37,696 | INFO     | ready for new job
[2025-05-18 05:26:48] 2025-05-18 09:26:37,696 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-18 05:26:48] 2025-05-18 09:26:37,698 | INFO     | **************************************
[2025-05-18 05:26:48] 2025-05-18 09:26:37,698 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-18 05:26:48] 2025-05-18 09:26:37,698 | INFO     | **************************************
[2025-05-18 05:26:48] 2025-05-18 09:26:37,698 | INFO     | 
[2025-05-18 05:26:48] 2025-05-18 09:26:37,714 | INFO     | architecture information:
[2025-05-18 05:26:48] 2025-05-18 09:26:37,714 | INFO     | executing command: cat /etc/os-release
[2025-05-18 05:26:48] 2025-05-18 09:26:37,725 | INFO     | cat /etc/os-release:
[2025-05-18 05:26:48] NAME="CentOS Linux"
[2025-05-18 05:26:48] VERSION="7 (Core)"
[2025-05-18 05:26:48] ID="centos"
[2025-05-18 05:26:48] ID_LIKE="rhel fedora"
[2025-05-18 05:26:48] VERSION_ID="7"
[2025-05-18 05:26:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-18 05:26:48] ANSI_COLOR="0;31"
[2025-05-18 05:26:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-18 05:26:48] HOME_URL="https://www.centos.org/"
[2025-05-18 05:26:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-18 05:26:48] 
[2025-05-18 05:26:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-18 05:26:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-18 05:26:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-18 05:26:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-18 05:26:48] 
[2025-05-18 05:26:48] 2025-05-18 09:26:37,725 | INFO     | **************************************
[2025-05-18 05:26:48] 2025-05-18 09:26:38,228 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-18 05:26:48] 2025-05-18 09:26:38,237 | INFO     | sufficient remaining disk space (96534003712 B)
[2025-05-18 05:26:48] 2025-05-18 09:26:38,237 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-18 05:26:48] 2025-05-18 09:26:38,237 | INFO     | current server update state: UPDATING_FINAL
[2025-05-18 05:26:48] 2025-05-18 09:26:38,237 | INFO     | update_server=False
[2025-05-18 05:26:48] 2025-05-18 09:26:38,237 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-18 05:26:48] 2025-05-18 09:26:38,238 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-18 05:26:48] 2025-05-18 09:26:38,238 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-18 05:26:48] 2025-05-18 09:26:38,298 | INFO     | all data control threads have been joined
[2025-05-18 05:26:48] 2025-05-18 09:26:38,592 | INFO     | all job control threads have been joined
[2025-05-18 05:26:48] 2025-05-18 09:26:38,738 | INFO     | found 0 job(s) in 20 queues
[2025-05-18 05:26:48] 2025-05-18 09:26:38,738 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-18 05:26:48] 2025-05-18 09:26:38,738 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-18 05:26:48] 2025-05-18 09:26:39,082 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-18 05:26:48] 2025-05-18 09:26:39,082 | INFO     | aborting loop
[2025-05-18 05:26:48] 2025-05-18 09:26:39,129 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-18 05:26:48] 2025-05-18 09:26:39,243 | INFO     | [job] retrieve thread has finished
[2025-05-18 05:26:48] 2025-05-18 09:26:39,243 | INFO     | [job] queue monitor thread has finished
[2025-05-18 05:26:48] 2025-05-18 09:26:39,303 | INFO     | [data] control thread has finished
[2025-05-18 05:26:48] 2025-05-18 09:26:39,375 | INFO     | [payload] failed_post thread has finished
[2025-05-18 05:26:48] 2025-05-18 09:26:39,375 | INFO     | [data] copytool_in thread has finished
[2025-05-18 05:26:48] 2025-05-18 09:26:39,400 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-18 05:26:48] 2025-05-18 09:26:39,423 | INFO     | all payload control threads have been joined
[2025-05-18 05:26:48] 2025-05-18 09:26:39,597 | INFO     | [job] control thread has finished
[2025-05-18 05:26:48] 2025-05-18 09:26:39,829 | INFO     | [job] validate thread has finished
[2025-05-18 05:26:48] 2025-05-18 09:26:39,930 | INFO     | [payload] validate_post thread has finished
[2025-05-18 05:26:48] 2025-05-18 09:26:40,042 | INFO     | [job] create_data_payload thread has finished
[2025-05-18 05:26:48] 2025-05-18 09:26:40,087 | INFO     | [job] job monitor thread has finished
[2025-05-18 05:26:48] 2025-05-18 09:26:40,137 | INFO     | [payload] validate_pre thread has finished
[2025-05-18 05:26:48] 2025-05-18 09:26:40,425 | INFO     | [payload] control thread has finished
[2025-05-18 05:26:48] 2025-05-18 09:26:40,542 | INFO     | [payload] execute_payloads thread has finished
[2025-05-18 05:26:48] 2025-05-18 09:26:41,134 | INFO     | [data] copytool_out thread has finished
[2025-05-18 05:26:48] 2025-05-18 09:26:42,244 | INFO     | [data] queue_monitor thread has finished
[2025-05-18 05:26:48] 2025-05-18 09:26:43,664 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139675167278912)>', '<ExcThread(monitor, started 139674509092608)>']
[2025-05-18 05:26:48] 2025-05-18 09:26:43,763 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-18 05:26:48] 2025-05-18 09:26:43,764 | INFO     | [monitor] control thread has ended
[2025-05-18 05:26:48] 2025-05-18 09:26:48,689 | INFO     | all workflow threads have been joined
[2025-05-18 05:26:48] 2025-05-18 09:26:48,689 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-18 05:26:48] 2025-05-18 09:26:48,689 | INFO     | traces error code: 0
[2025-05-18 05:26:48] 2025-05-18 09:26:48,689 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-18 05:26:48] 2025-05-18 09:26:48,781 [wrapper] ==== pilot stdout END ====
[2025-05-18 05:26:48] 2025-05-18 09:26:48,782 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-18 05:26:48] 2025-05-18 09:26:48,783 [wrapper] pilotpid: 2416310
[2025-05-18 05:26:48] 2025-05-18 09:26:48,784 [wrapper] Pilot exit status: 0
[2025-05-18 05:26:48] 2025-05-18 09:26:48,789 [wrapper] pandaids: 6656815057
[2025-05-18 05:26:48] 2025-05-18 09:26:48,824 [wrapper] cleanup supervisor_pilot 2587457 2416311
[2025-05-18 05:26:48] 2025-05-18 09:26:48,826 [wrapper] Test setup, not cleaning
[2025-05-18 05:26:48] 2025-05-18 09:26:48,827 [wrapper] apfmon messages muted
[2025-05-18 05:26:48] 2025-05-18 09:26:48,828 [wrapper] ==== wrapper stdout END ====
[2025-05-18 05:26:48] 2025-05-18 09:26:48,829 [wrapper] ==== wrapper stderr END ====
[2025-05-18 05:26:48]  *** Error codes and diagnostics ***
[2025-05-18 05:26:48]     "exeErrorCode": 0,
[2025-05-18 05:26:48]     "exeErrorDiag": "",
[2025-05-18 05:26:48]     "pilotErrorCode": 0,
[2025-05-18 05:26:48]     "pilotErrorDiag": "",
[2025-05-18 05:26:48]  *** Listing of results directory ***
[2025-05-18 05:26:48] total 406688
[2025-05-18 05:26:48] -rw-r--r--. 1 boincer umatlas    495897 May 18 03:37 pilot3.tar.gz
[2025-05-18 05:26:48] -rwx------. 1 boincer umatlas     37140 May 18 04:13 runpilot2-wrapper.sh
[2025-05-18 05:26:48] -rw-r--r--. 1 boincer umatlas      5111 May 18 04:13 queuedata.json
[2025-05-18 05:26:48] -rw-r--r--. 1 boincer umatlas       100 May 18 04:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-18 05:26:48] -rwxr-xr-x. 1 boincer umatlas      7986 May 18 04:14 run_atlas
[2025-05-18 05:26:48] -rw-r--r--. 1 boincer umatlas       105 May 18 04:14 job.xml
[2025-05-18 05:26:48] -rw-r--r--. 2 boincer umatlas 218888192 May 18 04:14 EVNT.44638096._002166.pool.root.1
[2025-05-18 05:26:48] -rw-r--r--. 2 boincer umatlas     17569 May 18 04:14 start_atlas.sh
[2025-05-18 05:26:48] drwxrwx--x. 2 boincer umatlas      4096 May 18 04:14 shared
[2025-05-18 05:26:48] -rw-r--r--. 2 boincer umatlas    508878 May 18 04:14 input.tar.gz
[2025-05-18 05:26:48] -rw-r--r--. 1 boincer umatlas         0 May 18 04:14 boinc_lockfile
[2025-05-18 05:26:48] -rw-r--r--. 1 boincer umatlas      2539 May 18 04:14 pandaJob.out
[2025-05-18 05:26:48] -rw-------. 1 boincer umatlas       467 May 18 04:14 setup.sh.local
[2025-05-18 05:26:48] -rw-------. 1 boincer umatlas    994627 May 18 04:14 agis_schedconf.cvmfs.json
[2025-05-18 05:26:48] -rw-------. 1 boincer umatlas   1596741 May 18 04:14 agis_ddmendpoints.agis.ALL.json
[2025-05-18 05:26:48] drwx------. 4 boincer umatlas      4096 May 18 04:14 pilot3
[2025-05-18 05:26:48] -rw-r--r--. 1 boincer umatlas      6859 May 18 05:22 init_data.xml
[2025-05-18 05:26:48] -rw-------. 1 boincer umatlas 192234922 May 18 05:26 HITS.44638099._057547.pool.root.1
[2025-05-18 05:26:48] -rw-r--r--. 1 boincer umatlas       529 May 18 05:26 boinc_task_state.xml
[2025-05-18 05:26:48] -rw-------. 1 boincer umatlas        95 May 18 05:26 pilot_heartbeat.json
[2025-05-18 05:26:48] -rw-------. 1 boincer umatlas      1030 May 18 05:26 memory_monitor_summary.json
[2025-05-18 05:26:48] -rw-------. 1 boincer umatlas    306381 May 18 05:26 log.44638099._057547.job.log.tgz.1
[2025-05-18 05:26:48] -rw-r--r--. 1 boincer umatlas      8192 May 18 05:26 boinc_mmap_file
[2025-05-18 05:26:48] -rw-r--r--. 1 boincer umatlas        27 May 18 05:26 wrapper_checkpoint.txt
[2025-05-18 05:26:48] -rw-------. 1 boincer umatlas      7713 May 18 05:26 heartbeat.json
[2025-05-18 05:26:48] -rw-------. 1 boincer umatlas      4353 May 18 05:26 pilotlog.txt
[2025-05-18 05:26:48] -rw-------. 1 boincer umatlas    435766 May 18 05:26 log.44638099._057547.job.log.1
[2025-05-18 05:26:48] -rw-------. 1 boincer umatlas       357 May 18 05:26 output.list
[2025-05-18 05:26:48] -rw-r--r--. 1 boincer umatlas       620 May 18 05:26 runtime_log
[2025-05-18 05:26:48] -rw-------. 1 boincer umatlas    757760 May 18 05:26 result.tar.gz
[2025-05-18 05:26:48] -rw-r--r--. 1 boincer umatlas     11428 May 18 05:26 runtime_log.err
[2025-05-18 05:26:48] -rw-------. 1 boincer umatlas       654 May 18 05:26 eDFODmiKoa7n9Rq4apOajLDm4fhM0noT9bVof3QYDmLmKKDmJUHohm.diag
[2025-05-18 05:26:48] -rw-r--r--. 1 boincer umatlas     21227 May 18 05:26 stderr.txt
[2025-05-18 05:26:48] HITS file was successfully produced:
[2025-05-18 05:26:48] -rw-------. 1 boincer umatlas 192234922 May 18 05:26 shared/HITS.pool.root.1
[2025-05-18 05:26:48]  *** Contents of shared directory: ***
[2025-05-18 05:26:48] total 402760
[2025-05-18 05:26:48] -rw-r--r--. 2 boincer umatlas 218888192 May 18 04:14 ATLAS.root_0
[2025-05-18 05:26:48] -rw-r--r--. 2 boincer umatlas     17569 May 18 04:14 start_atlas.sh
[2025-05-18 05:26:48] -rw-r--r--. 2 boincer umatlas    508878 May 18 04:14 input.tar.gz
[2025-05-18 05:26:48] -rw-------. 1 boincer umatlas 192234922 May 18 05:26 HITS.pool.root.1
[2025-05-18 05:26:48] -rw-------. 1 boincer umatlas    757760 May 18 05:26 result.tar.gz
05:26:50 (2412698): run_atlas exited; CPU time 27152.471331
05:26:50 (2412698): called boinc_finish(0)

</stderr_txt>
]]>

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