Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:46:16 (3841932): wrapper (7.7.26015): starting
17:46:16 (3841932): wrapper: running run_atlas (--nthreads 8)
[2025-05-17 17:46:16] Arguments: --nthreads 8
[2025-05-17 17:46:16] Threads: 8
[2025-05-17 17:46:16] Checking for CVMFS
[2025-05-17 17:46:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 17:46:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 17:46:16] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 17:46:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 17:46:17] 2.12.6.0 14765 7426 306284 146114 3 410 27611181 32935937 29574 16776704 1 80858766 99.707 59448749 19257 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-17 17:46:17] CVMFS is ok
[2025-05-17 17:46:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-17 17:46:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-17 17:46:17] Further information can be found at the LHC@home message board.
[2025-05-17 17:46:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 17:46:17] Checking for apptainer binary...
[2025-05-17 17:46:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 17:46:17] Running /usr/bin/apptainer --version
[2025-05-17 17:46:17] apptainer version 1.4.0-1.el9
[2025-05-17 17:46:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 17:46:17] c7-7-35.aglt2.org
[2025-05-17 17:46:17] apptainer works
[2025-05-17 17:46:17] Set ATHENA_PROC_NUMBER=8
[2025-05-17 17:46:17] Set ATHENA_CORE_NUMBER=8
[2025-05-17 17:46:17] Starting ATLAS job with PandaID=6656419467
[2025-05-17 17:46:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 19:26:36]  *** The last 200 lines of the pilot log: ***
[2025-05-17 19:26:36]  mtime=0
[2025-05-17 19:26:36]  protocol_id=None
[2025-05-17 19:26:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-17 19:26:36]  replicas=None
[2025-05-17 19:26:36]  scope=mc23_13p6TeV
[2025-05-17 19:26:36]  status=None
[2025-05-17 19:26:36]  status_code=0
[2025-05-17 19:26:36]  storage_token=
[2025-05-17 19:26:36]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6656419467/log.44638099._057356.job.log.tgz.1
[2025-05-17 19:26:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/14/7b/log.44638099._057356.job.log.tgz.1
[2025-05-17 19:26:36]  workdir=None
[2025-05-17 19:26:36] ]
[2025-05-17 19:26:36] 2025-05-17 23:26:20,580 | INFO     | transferring file log.44638099._057356.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6656419467/log.44638099._057356.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-05-17 19:26:36] 2025-05-17 23:26:20,581 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6656419467/log.44638099._057356.job.log.tgz.1 /tmp/boinchome/slots/0/log.44638099._057356.job
[2025-05-17 19:26:36] 2025-05-17 23:26:20,600 | INFO     | adding to output.list: log.44638099._057356.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/14/7b/log.44638099._057356.job.log.tg
[2025-05-17 19:26:36] 2025-05-17 23:26:20,600 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-17 19:26:36] 2025-05-17 23:26:20,601 | INFO     | summary of transferred files:
[2025-05-17 19:26:36] 2025-05-17 23:26:20,601 | INFO     |  -- lfn=log.44638099._057356.job.log.tgz.1, status_code=0, status=transferred
[2025-05-17 19:26:36] 2025-05-17 23:26:20,601 | INFO     | stage-out finished correctly
[2025-05-17 19:26:36] 2025-05-17 23:26:20,675 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-17 19:26:36] 2025-05-17 23:26:20,751 | INFO     | job 6656419467 has state=finished
[2025-05-17 19:26:36] 2025-05-17 23:26:20,752 | INFO     | preparing for final server update for job 6656419467 in state='finished'
[2025-05-17 19:26:36] 2025-05-17 23:26:20,752 | INFO     | this job has now completed (state=finished)
[2025-05-17 19:26:36] 2025-05-17 23:26:20,752 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-17 19:26:36] 2025-05-17 23:26:20,752 | INFO     | log transfer has been attempted: DONE
[2025-05-17 19:26:36] 2025-05-17 23:26:20,752 | INFO     | job 6656419467 has finished - writing final server update
[2025-05-17 19:26:36] 2025-05-17 23:26:20,753 | INFO     | total number of processed events: 400 (read)
[2025-05-17 19:26:36] 2025-05-17 23:26:20,770 | INFO     | executing command: lscpu
[2025-05-17 19:26:36] 2025-05-17 23:26:20,858 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-17 19:26:36] 2025-05-17 23:26:25,001 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-17 19:26:36] 2025-05-17 23:26:25,002 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6656419467/memory_monitor_summary.json (trf name=prmon)
[2025-05-17 19:26:36] 2025-05-17 23:26:25,003 | INFO     | extracted standard info from prmon json
[2025-05-17 19:26:36] 2025-05-17 23:26:25,003 | INFO     | extracted standard memory fields from prmon json
[2025-05-17 19:26:36] 2025-05-17 23:26:25,003 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-17 19:26:36] 2025-05-17 23:26:25,003 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-17 19:26:36] 2025-05-17 23:26:25,004 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-17 19:26:36] 2025-05-17 23:26:25,005 | INFO     | fitting pss+swap vs Time
[2025-05-17 19:26:36] 2025-05-17 23:26:25,005 | INFO     | sum of square deviations: 233641590.0
[2025-05-17 19:26:36] 2025-05-17 23:26:25,005 | INFO     | sum of deviations: 20199092015.999996
[2025-05-17 19:26:36] 2025-05-17 23:26:25,006 | INFO     | mean x: 1747521465.0
[2025-05-17 19:26:36] 2025-05-17 23:26:25,006 | INFO     | mean y: 2113049.901098901
[2025-05-17 19:26:36] 2025-05-17 23:26:25,006 | INFO     | -- intersect: -151076925880.92502
[2025-05-17 19:26:36] 2025-05-17 23:26:25,006 | INFO     | intersect: -151076925880.92502
[2025-05-17 19:26:36] 2025-05-17 23:26:25,006 | INFO     | chi2: 1.4764293313442292
[2025-05-17 19:26:36] 2025-05-17 23:26:25,006 | INFO     | -- intersect: -151076925880.92502
[2025-05-17 19:26:36] 2025-05-17 23:26:25,006 | INFO     | current memory leak: 86.45 B/s (using 91 data points, chi2=1.48)
[2025-05-17 19:26:36] 2025-05-17 23:26:25,007 | INFO     | ..............................
[2025-05-17 19:26:36] 2025-05-17 23:26:25,007 | INFO     | . Timing measurements:
[2025-05-17 19:26:36] 2025-05-17 23:26:25,007 | INFO     | . get job = 0 s
[2025-05-17 19:26:36] 2025-05-17 23:26:25,007 | INFO     | . initial setup = 2 s
[2025-05-17 19:26:36] 2025-05-17 23:26:25,007 | INFO     | . payload setup = 6 s
[2025-05-17 19:26:36] 2025-05-17 23:26:25,007 | INFO     | . stage-in = 0 s
[2025-05-17 19:26:36] 2025-05-17 23:26:25,007 | INFO     | . payload execution = 5966 s
[2025-05-17 19:26:36] 2025-05-17 23:26:25,007 | INFO     | . stage-out = 0 s
[2025-05-17 19:26:36] 2025-05-17 23:26:25,007 | INFO     | . log creation = 0 s
[2025-05-17 19:26:36] 2025-05-17 23:26:25,007 | INFO     | ..............................
[2025-05-17 19:26:36] 2025-05-17 23:26:25,056 | INFO     | 
[2025-05-17 19:26:36] 2025-05-17 23:26:25,056 | INFO     | job summary report
[2025-05-17 19:26:36] 2025-05-17 23:26:25,056 | INFO     | --------------------------------------------------
[2025-05-17 19:26:36] 2025-05-17 23:26:25,056 | INFO     | PanDA job id: 6656419467
[2025-05-17 19:26:36] 2025-05-17 23:26:25,056 | INFO     | task id: 44638099
[2025-05-17 19:26:36] 2025-05-17 23:26:25,056 | INFO     | errors: (none)
[2025-05-17 19:26:36] 2025-05-17 23:26:25,056 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 19:26:36] 2025-05-17 23:26:25,056 | INFO     | pilot state: finished 
[2025-05-17 19:26:36] 2025-05-17 23:26:25,056 | INFO     | transexitcode: 0
[2025-05-17 19:26:36] 2025-05-17 23:26:25,057 | INFO     | exeerrorcode: 0
[2025-05-17 19:26:36] 2025-05-17 23:26:25,057 | INFO     | exeerrordiag: 
[2025-05-17 19:26:36] 2025-05-17 23:26:25,057 | INFO     | exitcode: 0
[2025-05-17 19:26:36] 2025-05-17 23:26:25,057 | INFO     | exitmsg: OK
[2025-05-17 19:26:36] 2025-05-17 23:26:25,057 | INFO     | cpuconsumptiontime: 39364 s
[2025-05-17 19:26:36] 2025-05-17 23:26:25,057 | INFO     | nevents: 400
[2025-05-17 19:26:36] 2025-05-17 23:26:25,057 | INFO     | neventsw: 0
[2025-05-17 19:26:36] 2025-05-17 23:26:25,057 | INFO     | pid: 3853899
[2025-05-17 19:26:36] 2025-05-17 23:26:25,057 | INFO     | pgrp: 3853899
[2025-05-17 19:26:36] 2025-05-17 23:26:25,057 | INFO     | corecount: 8
[2025-05-17 19:26:36] 2025-05-17 23:26:25,057 | INFO     | event service: False
[2025-05-17 19:26:36] 2025-05-17 23:26:25,058 | INFO     | sizes: {0: 2393596, 1: 2393738, 5: 2393944, 11: 2394000, 5977: 2420612, 5978: 2429737, 5982: 2429851}
[2025-05-17 19:26:36] 2025-05-17 23:26:25,058 | INFO     | --------------------------------------------------
[2025-05-17 19:26:36] 2025-05-17 23:26:25,058 | INFO     | 
[2025-05-17 19:26:36] 2025-05-17 23:26:25,058 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-17 19:26:36] 2025-05-17 23:26:25,080 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 19:26:36] 2025-05-17 23:26:25,080 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 19:26:36] 2025-05-17 23:26:25,080 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 19:26:36] 2025-05-17 23:26:25,080 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 19:26:36] 2025-05-17 23:26:25,080 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 19:26:36] 2025-05-17 23:26:25,080 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 19:26:36] 2025-05-17 23:26:25,080 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 19:26:36] 2025-05-17 23:26:25,080 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 19:26:36] 2025-05-17 23:26:25,081 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 19:26:36] 2025-05-17 23:26:25,081 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 19:26:36] 2025-05-17 23:26:25,081 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 19:26:36] 2025-05-17 23:26:25,081 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 19:26:36] 2025-05-17 23:26:25,081 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 19:26:36] 2025-05-17 23:26:25,081 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 19:26:36] 2025-05-17 23:26:25,081 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 19:26:36] 2025-05-17 23:26:25,081 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 19:26:36] 2025-05-17 23:26:25,081 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 19:26:36] 2025-05-17 23:26:25,081 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 19:26:36] 2025-05-17 23:26:25,081 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 19:26:36] 2025-05-17 23:26:25,081 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 19:26:36] 2025-05-17 23:26:25,081 | INFO     | job 6656419467 has completed (purged errors)
[2025-05-17 19:26:36] 2025-05-17 23:26:25,082 | INFO     | overall cleanup function is called
[2025-05-17 19:26:36] 2025-05-17 23:26:25,292 | WARNING  | process 3853899 can no longer be monitored (due to stat problems) - aborting
[2025-05-17 19:26:36] 2025-05-17 23:26:25,631 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-05-17 19:26:36] 2025-05-17 23:26:25,632 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-05-17 19:26:36] 2025-05-17 23:26:25,632 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-6656419467/payload.stdout) since it has not been created yet
[2025-05-17 19:26:36] 2025-05-17 23:26:25,633 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-17 19:26:36] 2025-05-17 23:26:25,646 | INFO     | sufficient remaining disk space (76619448320 B)
[2025-05-17 19:26:36] 2025-05-17 23:26:25,646 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-05-17 19:26:36] 2025-05-17 23:26:25,647 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6656419467/HITS.44638099._057356.pool.root.1 since it does not exist
[2025-05-17 19:26:36] 2025-05-17 23:26:26,091 | INFO     | --- collectZombieJob: --- 10, [3853899]
[2025-05-17 19:26:36] 2025-05-17 23:26:26,092 | INFO     | zombie collector waiting for pid 3853899
[2025-05-17 19:26:36] 2025-05-17 23:26:26,092 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 19:26:36] 2025-05-17 23:26:26,092 | INFO     | collected zombie processes
[2025-05-17 19:26:36] 2025-05-17 23:26:26,092 | INFO     | will attempt to kill all subprocesses of pid=3853899
[2025-05-17 19:26:36] 2025-05-17 23:26:26,164 | INFO     | number of running child processes to parent process 3853899: 1
[2025-05-17 19:26:36] 2025-05-17 23:26:26,165 | INFO     | maximum number of monitored processes: 6
[2025-05-17 19:26:36] 2025-05-17 23:26:26,165 | INFO     | aborting job monitoring since job object (job id=6656419467) has expired
[2025-05-17 19:26:36] 2025-05-17 23:26:26,556 | INFO     | process IDs to be killed: [3853899] (in reverse order)
[2025-05-17 19:26:36] 2025-05-17 23:26:26,738 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 19:26:36] 2025-05-17 23:26:26,738 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 19:26:36] 2025-05-17 23:26:26,754 | INFO     | did not find any defunct processes belonging to 3853899
[2025-05-17 19:26:36] 2025-05-17 23:26:26,771 | INFO     | did not find any defunct processes belonging to 3853899
[2025-05-17 19:26:36] 2025-05-17 23:26:26,771 | INFO     | ready for new job
[2025-05-17 19:26:36] 2025-05-17 23:26:26,771 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 19:26:36] 2025-05-17 23:26:26,772 | INFO     | **************************************
[2025-05-17 19:26:36] 2025-05-17 23:26:26,773 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 19:26:36] 2025-05-17 23:26:26,773 | INFO     | **************************************
[2025-05-17 19:26:36] 2025-05-17 23:26:26,773 | INFO     | 
[2025-05-17 19:26:36] 2025-05-17 23:26:26,789 | INFO     | architecture information:
[2025-05-17 19:26:36] 2025-05-17 23:26:26,790 | INFO     | executing command: cat /etc/os-release
[2025-05-17 19:26:36] 2025-05-17 23:26:26,805 | INFO     | cat /etc/os-release:
[2025-05-17 19:26:36] NAME="CentOS Linux"
[2025-05-17 19:26:36] VERSION="7 (Core)"
[2025-05-17 19:26:36] ID="centos"
[2025-05-17 19:26:36] ID_LIKE="rhel fedora"
[2025-05-17 19:26:36] VERSION_ID="7"
[2025-05-17 19:26:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 19:26:36] ANSI_COLOR="0;31"
[2025-05-17 19:26:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 19:26:36] HOME_URL="https://www.centos.org/"
[2025-05-17 19:26:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 19:26:36] 
[2025-05-17 19:26:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 19:26:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 19:26:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 19:26:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 19:26:36] 
[2025-05-17 19:26:36] 2025-05-17 23:26:26,805 | INFO     | **************************************
[2025-05-17 19:26:36] 2025-05-17 23:26:27,308 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-17 19:26:36] 2025-05-17 23:26:27,326 | INFO     | sufficient remaining disk space (76620496896 B)
[2025-05-17 19:26:36] 2025-05-17 23:26:27,327 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 19:26:36] 2025-05-17 23:26:27,327 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 19:26:36] 2025-05-17 23:26:27,327 | INFO     | update_server=False
[2025-05-17 19:26:36] 2025-05-17 23:26:27,327 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 19:26:36] 2025-05-17 23:26:27,327 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 19:26:36] 2025-05-17 23:26:27,327 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 19:26:36] 2025-05-17 23:26:27,327 | INFO     | aborting loop
[2025-05-17 19:26:36] 2025-05-17 23:26:27,328 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-17 19:26:36] 2025-05-17 23:26:27,328 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 19:26:36] 2025-05-17 23:26:27,328 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 19:26:36] 2025-05-17 23:26:27,328 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 19:26:36] 2025-05-17 23:26:27,417 | INFO     | all data control threads have been joined
[2025-05-17 19:26:36] 2025-05-17 23:26:28,046 | INFO     | all payload control threads have been joined
[2025-05-17 19:26:36] 2025-05-17 23:26:28,332 | INFO     | [job] job monitor thread has finished
[2025-05-17 19:26:36] 2025-05-17 23:26:28,332 | INFO     | [job] retrieve thread has finished
[2025-05-17 19:26:36] 2025-05-17 23:26:28,422 | INFO     | [data] control thread has finished
[2025-05-17 19:26:36] 2025-05-17 23:26:28,476 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 19:26:36] 2025-05-17 23:26:28,591 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 19:26:36] 2025-05-17 23:26:28,657 | INFO     | all job control threads have been joined
[2025-05-17 19:26:36] 2025-05-17 23:26:28,686 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 19:26:36] 2025-05-17 23:26:28,873 | INFO     | [payload] validate_post thread has finished
[2025-05-17 19:26:36] 2025-05-17 23:26:28,970 | INFO     | [job] validate thread has finished
[2025-05-17 19:26:36] 2025-05-17 23:26:29,051 | INFO     | [payload] control thread has finished
[2025-05-17 19:26:36] 2025-05-17 23:26:29,174 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 19:26:36] 2025-05-17 23:26:29,385 | INFO     | [data] copytool_in thread has finished
[2025-05-17 19:26:36] 2025-05-17 23:26:29,402 | INFO     | [payload] failed_post thread has finished
[2025-05-17 19:26:36] 2025-05-17 23:26:29,663 | INFO     | [job] control thread has finished
[2025-05-17 19:26:36] 2025-05-17 23:26:29,807 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 19:26:36] 2025-05-17 23:26:30,061 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 19:26:36] 2025-05-17 23:26:30,691 | INFO     | [data] copytool_out thread has finished
[2025-05-17 19:26:36] 2025-05-17 23:26:31,067 | INFO     | [job] queue monitor thread has finished
[2025-05-17 19:26:36] 2025-05-17 23:26:31,333 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 19:26:36] 2025-05-17 23:26:31,363 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140131376527168)>', '<ExcThread(monitor, started 140130740328192)>']
[2025-05-17 19:26:36] 2025-05-17 23:26:32,356 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 19:26:36] 2025-05-17 23:26:32,356 | INFO     | [monitor] control thread has ended
[2025-05-17 19:26:36] 2025-05-17 23:26:36,387 | INFO     | all workflow threads have been joined
[2025-05-17 19:26:36] 2025-05-17 23:26:36,388 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 19:26:36] 2025-05-17 23:26:36,388 | INFO     | traces error code: 0
[2025-05-17 19:26:36] 2025-05-17 23:26:36,388 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 19:26:36] 2025-05-17 23:26:36,527 [wrapper] ==== pilot stdout END ====
[2025-05-17 19:26:36] 2025-05-17 23:26:36,529 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 19:26:36] 2025-05-17 23:26:36,532 [wrapper] pilotpid: 3846399
[2025-05-17 19:26:36] 2025-05-17 23:26:36,534 [wrapper] Pilot exit status: 0
[2025-05-17 19:26:36] 2025-05-17 23:26:36,545 [wrapper] pandaids: 6656419467
[2025-05-17 19:26:36] 2025-05-17 23:26:36,655 [wrapper] cleanup supervisor_pilot 1142532 3846400
[2025-05-17 19:26:36] 2025-05-17 23:26:36,658 [wrapper] Test setup, not cleaning
[2025-05-17 19:26:36] 2025-05-17 23:26:36,659 [wrapper] apfmon messages muted
[2025-05-17 19:26:36] 2025-05-17 23:26:36,662 [wrapper] ==== wrapper stdout END ====
[2025-05-17 19:26:36] 2025-05-17 23:26:36,664 [wrapper] ==== wrapper stderr END ====
[2025-05-17 19:26:36]  *** Error codes and diagnostics ***
[2025-05-17 19:26:36]     "exeErrorCode": 0,
[2025-05-17 19:26:36]     "exeErrorDiag": "",
[2025-05-17 19:26:36]     "pilotErrorCode": 0,
[2025-05-17 19:26:36]     "pilotErrorDiag": "",
[2025-05-17 19:26:36]  *** Listing of results directory ***
[2025-05-17 19:26:36] total 421980
[2025-05-17 19:26:36] -rwx------. 1 boincer umatlas     37140 May 17 17:45 runpilot2-wrapper.sh
[2025-05-17 19:26:36] -rw-r--r--. 1 boincer umatlas    495897 May 17 17:45 pilot3.tar.gz
[2025-05-17 19:26:36] -rw-r--r--. 1 boincer umatlas      5111 May 17 17:45 queuedata.json
[2025-05-17 19:26:36] -rw-r--r--. 1 boincer umatlas       100 May 17 17:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 19:26:36] -rwxr-xr-x. 1 boincer umatlas      7986 May 17 17:46 run_atlas
[2025-05-17 19:26:36] -rw-r--r--. 1 boincer umatlas       105 May 17 17:46 job.xml
[2025-05-17 19:26:36] -rw-r--r--. 2 boincer umatlas 224691512 May 17 17:46 EVNT.44638096._000414.pool.root.1
[2025-05-17 19:26:36] -rw-r--r--. 2 boincer umatlas     17569 May 17 17:46 start_atlas.sh
[2025-05-17 19:26:36] drwxrwx--x. 2 boincer umatlas      4096 May 17 17:46 shared
[2025-05-17 19:26:36] -rw-r--r--. 2 boincer umatlas    508873 May 17 17:46 input.tar.gz
[2025-05-17 19:26:36] -rw-r--r--. 1 boincer umatlas         0 May 17 17:46 boinc_lockfile
[2025-05-17 19:26:36] -rw-r--r--. 1 boincer umatlas      2538 May 17 17:46 pandaJob.out
[2025-05-17 19:26:36] -rw-------. 1 boincer umatlas       467 May 17 17:46 setup.sh.local
[2025-05-17 19:26:36] -rw-------. 1 boincer umatlas    994635 May 17 17:46 agis_schedconf.cvmfs.json
[2025-05-17 19:26:36] -rw-------. 1 boincer umatlas   1596741 May 17 17:46 agis_ddmendpoints.agis.ALL.json
[2025-05-17 19:26:36] drwx------. 4 boincer umatlas      4096 May 17 17:46 pilot3
[2025-05-17 19:26:36] -rw-r--r--. 1 boincer umatlas      6932 May 17 19:20 init_data.xml
[2025-05-17 19:26:36] -rw-------. 1 boincer umatlas        95 May 17 19:25 pilot_heartbeat.json
[2025-05-17 19:26:36] -rw-------. 1 boincer umatlas 201781946 May 17 19:25 HITS.44638099._057356.pool.root.1
[2025-05-17 19:26:36] -rw-r--r--. 1 boincer umatlas       529 May 17 19:26 boinc_task_state.xml
[2025-05-17 19:26:36] -rw-------. 1 boincer umatlas      1034 May 17 19:26 memory_monitor_summary.json
[2025-05-17 19:26:36] -rw-------. 1 boincer umatlas    324060 May 17 19:26 log.44638099._057356.job.log.tgz.1
[2025-05-17 19:26:36] -rw-r--r--. 1 boincer umatlas        27 May 17 19:26 wrapper_checkpoint.txt
[2025-05-17 19:26:36] -rw-r--r--. 1 boincer umatlas      8192 May 17 19:26 boinc_mmap_file
[2025-05-17 19:26:36] -rw-------. 1 boincer umatlas      7690 May 17 19:26 heartbeat.json
[2025-05-17 19:26:36] -rw-------. 1 boincer umatlas      4476 May 17 19:26 pilotlog.txt
[2025-05-17 19:26:36] -rw-------. 1 boincer umatlas    569577 May 17 19:26 log.44638099._057356.job.log.1
[2025-05-17 19:26:36] -rw-------. 1 boincer umatlas       357 May 17 19:26 output.list
[2025-05-17 19:26:36] -rw-r--r--. 1 boincer umatlas       620 May 17 19:26 runtime_log
[2025-05-17 19:26:36] -rw-------. 1 boincer umatlas    911360 May 17 19:26 result.tar.gz
[2025-05-17 19:26:36] -rw-------. 1 boincer umatlas       653 May 17 19:26 ZVZKDmuWea7n9Rq4apOajLDm4fhM0noT9bVof3QYDmQlKKDmKiptIo.diag
[2025-05-17 19:26:36] -rw-r--r--. 1 boincer umatlas     11413 May 17 19:26 runtime_log.err
[2025-05-17 19:26:36] -rw-r--r--. 1 boincer umatlas     21801 May 17 19:26 stderr.txt
[2025-05-17 19:26:36] HITS file was successfully produced:
[2025-05-17 19:26:36] -rw-------. 1 boincer umatlas 201781946 May 17 19:25 shared/HITS.pool.root.1
[2025-05-17 19:26:36]  *** Contents of shared directory: ***
[2025-05-17 19:26:36] total 417900
[2025-05-17 19:26:36] -rw-r--r--. 2 boincer umatlas 224691512 May 17 17:46 ATLAS.root_0
[2025-05-17 19:26:36] -rw-r--r--. 2 boincer umatlas     17569 May 17 17:46 start_atlas.sh
[2025-05-17 19:26:36] -rw-r--r--. 2 boincer umatlas    508873 May 17 17:46 input.tar.gz
[2025-05-17 19:26:36] -rw-------. 1 boincer umatlas 201781946 May 17 19:25 HITS.pool.root.1
[2025-05-17 19:26:36] -rw-------. 1 boincer umatlas    911360 May 17 19:26 result.tar.gz
19:26:38 (3841932): run_atlas exited; CPU time 39592.858524
19:26:38 (3841932): called boinc_finish(0)

</stderr_txt>
]]>

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