Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-18 05:33:35 (42480): Detected: vboxwrapper 26206
2025-05-18 05:33:35 (42480): Detected: BOINC client v7.16.11
2025-05-18 05:33:36 (42480): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-05-18 05:33:37 (42480): Successfully copied 'init_data.xml' to the shared directory.
2025-05-18 05:33:37 (42480): Create VM. (boinc_80b44b08ceb5ab26, slot#0)
2025-05-18 05:33:38 (42480): Setting Memory Size for VM. (4800MB)
2025-05-18 05:33:38 (42480): Setting CPU Count for VM. (8)
2025-05-18 05:33:38 (42480): Setting Chipset Options for VM.
2025-05-18 05:33:39 (42480): Setting Graphics Controller Options for VM.
2025-05-18 05:33:39 (42480): Setting Boot Options for VM.
2025-05-18 05:33:39 (42480): Setting Network Configuration for NAT.
2025-05-18 05:33:40 (42480): Enabling VM Network Access.
2025-05-18 05:33:40 (42480): Disabling USB Support for VM.
2025-05-18 05:33:40 (42480): Disabling COM Port Support for VM.
2025-05-18 05:33:40 (42480): Disabling LPT Port Support for VM.
2025-05-18 05:33:41 (42480): Disabling Audio Support for VM.
2025-05-18 05:33:41 (42480): Disabling Clipboard Support for VM.
2025-05-18 05:33:41 (42480): Disabling Drag and Drop Support for VM.
2025-05-18 05:33:41 (42480): Adding storage controller(s) to VM.
2025-05-18 05:33:42 (42480): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-18 05:33:45 (42480): Adding VirtualBox Guest Additions to VM.
2025-05-18 05:33:45 (42480): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-18 05:33:45 (42480): forwarding host port 64322 to guest port 80
2025-05-18 05:33:45 (42480): Enabling remote desktop for VM.
2025-05-18 05:33:46 (42480): Enabling shared directory for VM.
2025-05-18 05:33:47 (42480): Starting VM using VBoxManage interface. (boinc_80b44b08ceb5ab26, slot#0)
2025-05-18 05:33:53 (42480): Successfully started VM. (PID = '26436')
2025-05-18 05:33:53 (42480): Reporting VM Process ID to BOINC.
2025-05-18 05:33:53 (42480): Guest Log: BIOS: VirtualBox 7.1.8
2025-05-18 05:33:53 (42480): Guest Log: CPUID EDX: 0x178bfbff
2025-05-18 05:33:53 (42480): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-18 05:33:53 (42480): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-18 05:33:53 (42480): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-18 05:33:53 (42480): Detected: Web Application Enabled (http://localhost:64322)
2025-05-18 05:33:53 (42480): Detected: Remote Desktop Enabled (localhost:64323)
2025-05-18 05:33:53 (42480): Preference change detected
2025-05-18 05:33:53 (42480): Setting CPU throttle for VM. (90%)
2025-05-18 05:33:53 (42480): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-18 05:33:56 (42480): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-18 05:33:56 (42480): Guest Log: BIOS: Booting from Hard Disk...
2025-05-18 05:34:09 (42480): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-18 05:34:09 (42480): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-18 05:34:09 (42480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-18 05:34:09 (42480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-18 05:34:09 (42480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-18 05:34:09 (42480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-18 05:34:09 (42480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-18 05:34:09 (42480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-18 05:34:09 (42480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-18 05:34:09 (42480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-18 05:34:09 (42480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-18 05:34:09 (42480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-18 05:34:09 (42480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-18 05:34:09 (42480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-18 05:34:09 (42480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-18 05:34:09 (42480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-18 05:34:09 (42480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-18 05:34:09 (42480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-18 05:34:09 (42480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-18 05:34:09 (42480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-18 05:34:09 (42480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-18 05:34:09 (42480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-18 05:34:09 (42480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-18 05:34:09 (42480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-18 05:34:09 (42480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-18 05:34:09 (42480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-18 05:34:09 (42480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-18 05:34:09 (42480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-18 05:34:09 (42480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-18 05:34:09 (42480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-18 05:34:09 (42480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-18 05:34:09 (42480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-18 05:34:42 (42480): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-18 05:34:42 (42480): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-18 05:35:15 (42480): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-18 05:35:15 (42480): Guest Log: 00:00:00.000536 main     Log opened 2025-05-18T05:35:14.149365000Z
2025-05-18 05:35:15 (42480): Guest Log: 00:00:00.000795 main     OS Product: Linux
2025-05-18 05:35:15 (42480): Guest Log: 00:00:00.001002 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-18 05:35:15 (42480): Guest Log: 00:00:00.001737 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-18 05:35:15 (42480): Guest Log: 00:00:00.002329 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-18 05:35:15 (42480): Guest Log: 00:00:00.002330 main     Process ID: 1403
2025-05-18 05:35:15 (42480): Guest Log: 00:00:00.002331 main     Package type: LINUX_64BITS_GENERIC
2025-05-18 05:35:15 (42480): Guest Log: 00:00:00.015721 main     5.2.32 r132073 started. Verbose level = 0
2025-05-18 05:35:16 (42480): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-18 05:35:16 (42480): Guest Log: [INFO] Mounting shared directory
2025-05-18 05:35:16 (42480): Guest Log: [INFO] Checking for init_data.xml
2025-05-18 05:35:22 (42480): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-18 05:35:22 (42480): Guest Log: [INFO] Detected branch: prod
2025-05-18 05:35:23 (42480): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-18 05:35:23 (42480): Guest Log: Copying input files
2025-05-18 05:35:26 (42480): Guest Log: 00:00:10.040471 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 303 514 000ns (GuestNow=1 747 542 925 872 866 000 ns GuestLast=1 747 546 514 176 380 000 ns fSetTimeLastLoop=true )
2025-05-18 05:35:36 (42480): Guest Log: Copied input files into RunAtlas.
2025-05-18 05:35:36 (42480): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-18 05:35:36 (42480): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-18 05:35:36 (42480): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-18 05:35:36 (42480): Guest Log: Further information can be found at the LHC@home message board.
2025-05-18 05:35:47 (42480): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-18 05:35:47 (42480): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-18 05:35:48 (42480): Guest Log: 2.6.3.0 1681 0 30184 146124 4 1 3117515 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-18 05:35:52 (42480): Guest Log: copied the webapp to /var/www
2025-05-18 05:35:52 (42480): Guest Log: ATHENA_PROC_NUMBER=8
2025-05-18 05:35:52 (42480): Guest Log: ATHENA_CORE_NUMBER=8
2025-05-18 05:35:52 (42480): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-18 05:35:53 (42480): Guest Log:  *** Starting ATLAS job. (PandaID=6653399571 taskID=44638099) ***
2025-05-18 07:14:23 (42480): Status Report: Elapsed Time: '6000.000000'
2025-05-18 07:14:23 (42480): Status Report: CPU Time: '28507.421875'
2025-05-18 08:55:15 (42480): Status Report: Elapsed Time: '12000.000000'
2025-05-18 08:55:15 (42480): Status Report: CPU Time: '69959.203125'
2025-05-18 10:36:13 (42480): Status Report: Elapsed Time: '18000.000000'
2025-05-18 10:36:13 (42480): Status Report: CPU Time: '111413.203125'
2025-05-18 12:16:55 (42480): Status Report: Elapsed Time: '24000.000000'
2025-05-18 12:16:55 (42480): Status Report: CPU Time: '153095.421875'
2025-05-18 12:40:14 (42480): Guest Log:  *** Job finished ***
2025-05-18 12:40:14 (42480): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-18 12:40:14 (42480): Guest Log: 2025-05-18 11:40:03,582 | INFO     | [data] copytool_out thread has finished
2025-05-18 12:40:14 (42480): Guest Log: 2025-05-18 11:40:03,822 | INFO     | [job] queue monitor thread has finished
2025-05-18 12:40:14 (42480): Guest Log: 2025-05-18 11:40:04,586 | INFO     | [data] queue_monitor thread has finished
2025-05-18 12:40:15 (42480): Guest Log: 2025-05-18 11:40:04,733 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140252705064768)>', '<ExcThread(monitor, started 140252257695488)>']
2025-05-18 12:40:15 (42480): Guest Log: 2025-05-18 11:40:05,686 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-18 12:40:15 (42480): Guest Log: 2025-05-18 11:40:05,686 | INFO     | [monitor] control thread has ended
2025-05-18 12:40:15 (42480): Guest Log: 2025-05-18 11:40:09,757 | INFO     | all workflow threads have been joined
2025-05-18 12:40:15 (42480): Guest Log: 2025-05-18 11:40:09,757 | INFO     | end of generic workflow (traces error code: 0)
2025-05-18 12:40:15 (42480): Guest Log: 2025-05-18 11:40:09,758 | INFO     | traces error code: 0
2025-05-18 12:40:15 (42480): Guest Log: 2025-05-18 11:40:09,758 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-18 12:40:15 (42480): Guest Log: 2025-05-18 11:40:09,994 [wrapper] ==== pilot stdout END ====
2025-05-18 12:40:15 (42480): Guest Log: 2025-05-18 11:40:10,026 [wrapper] ==== wrapper stdout RESUME ====
2025-05-18 12:40:15 (42480): Guest Log: 2025-05-18 11:40:10,074 [wrapper] pilotpid: 6075
2025-05-18 12:40:15 (42480): Guest Log: 2025-05-18 11:40:10,120 [wrapper] Pilot exit status: 0
2025-05-18 12:40:15 (42480): Guest Log: 2025-05-18 11:40:10,435 [wrapper] pandaids: 6653399571
2025-05-18 12:40:15 (42480): Guest Log: 2025-05-18 11:40:10,935 [wrapper] cleanup supervisor_pilot 26820 6076
2025-05-18 12:40:15 (42480): Guest Log: 2025-05-18 11:40:10,988 [wrapper] Test setup, not cleaning
2025-05-18 12:40:15 (42480): Guest Log: 2025-05-18 11:40:11,035 [wrapper] apfmon messages muted
2025-05-18 12:40:15 (42480): Guest Log: 2025-05-18 11:40:11,089 [wrapper] ==== wrapper stdout END ====
2025-05-18 12:40:15 (42480): Guest Log: 2025-05-18 11:40:11,152 [wrapper] ==== wrapper stderr END ====
2025-05-18 12:40:15 (42480): Guest Log:  *** Error codes and diagnostics ***
2025-05-18 12:40:15 (42480): Guest Log:     "exeErrorCode": 0,
2025-05-18 12:40:15 (42480): Guest Log:     "exeErrorDiag": "",
2025-05-18 12:40:15 (42480): Guest Log:     "pilotErrorCode": 0,
2025-05-18 12:40:15 (42480): Guest Log:     "pilotErrorDiag": "",
2025-05-18 12:40:15 (42480): Guest Log:  *** Listing of results directory ***
2025-05-18 12:40:15 (42480): Guest Log: total 187956
2025-05-18 12:40:15 (42480): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 17 10:38 pilot3.tar.gz
2025-05-18 12:40:15 (42480): Guest Log: -rwx------. 1 atlas atlas     37140 May 17 10:51 runpilot2-wrapper.sh
2025-05-18 12:40:15 (42480): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 17 10:51 queuedata.json
2025-05-18 12:40:15 (42480): Guest Log: -rwxr-xr-x. 1 atlas atlas     11749 May 18 04:35 init_data.xml
2025-05-18 12:40:15 (42480): Guest Log: -rwxr-xr-x. 1 atlas atlas    508875 May 18 04:35 input.tar.gz
2025-05-18 12:40:15 (42480): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 May 18 04:35 start_atlas.sh
2025-05-18 12:40:15 (42480): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 18 04:35 EVNT.44638096._002192.pool.root.1 -> /data/./ATLAS.root_0
2025-05-18 12:40:15 (42480): Guest Log: -rw-r--r--. 1 atlas atlas      2539 May 18 04:35 pandaJob.out
2025-05-18 12:40:15 (42480): Guest Log: -rw-------. 1 atlas atlas       424 May 18 04:36 setup.sh.local
2025-05-18 12:40:15 (42480): Guest Log: -rw-------. 1 atlas atlas    994627 May 18 04:39 agis_schedconf.cvmfs.json
2025-05-18 12:40:15 (42480): Guest Log: drwx------. 4 atlas atlas      4096 May 18 04:39 pilot3
2025-05-18 12:40:15 (42480): Guest Log: -rw-------. 1 atlas atlas 184055081 May 18 11:37 HITS.44638099._054548.pool.root.1
2025-05-18 12:40:15 (42480): Guest Log: -rw-------. 1 atlas atlas      1040 May 18 11:38 memory_monitor_summary.json
2025-05-18 12:40:15 (42480): Guest Log: -rw-------. 1 atlas atlas   1596741 May 18 11:38 agis_ddmendpoints.agis.ALL.json
2025-05-18 12:40:15 (42480): Guest Log: -rw-------. 1 atlas atlas    477540 May 18 11:38 log.44638099._054548.job.log.tgz.1
2025-05-18 12:40:15 (42480): Guest Log: -rw-------. 1 atlas atlas        95 May 18 11:39 pilot_heartbeat.json
2025-05-18 12:40:15 (42480): Guest Log: -rw-------. 1 atlas atlas      7725 May 18 11:39 heartbeat.json
2025-05-18 12:40:15 (42480): Guest Log: -rw-------. 1 atlas atlas      4413 May 18 11:40 pilotlog.txt
2025-05-18 12:40:16 (42480): Guest Log: -rw-------. 1 atlas atlas   1841990 May 18 11:40 log.44638099._054548.job.log.1
2025-05-18 12:40:16 (42480): Guest Log: -rw-------. 1 atlas atlas       357 May 18 11:40 output.list
2025-05-18 12:40:16 (42480): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 18 11:40 runtime_log
2025-05-18 12:40:16 (42480): Guest Log: -rw-------. 1 atlas atlas   2334720 May 18 11:40 result.tar.gz
2025-05-18 12:40:16 (42480): Guest Log: -rw-r--r--. 1 atlas atlas     10908 May 18 11:40 runtime_log.err
2025-05-18 12:40:16 (42480): Guest Log: -rw-------. 1 atlas atlas       653 May 18 11:40 AQjKDmTJUa7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlMOKDmJhgK6n.diag
2025-05-18 12:40:16 (42480): Guest Log: Looking for outputfile HITS.44638099._054548.pool.root.1
2025-05-18 12:40:16 (42480): Guest Log: HITS file was successfully produced
2025-05-18 12:40:16 (42480): Guest Log: -rw-------. 1 atlas atlas 184055081 May 18 11:37 /home/atlas/RunAtlas/HITS.44638099._054548.pool.root.1
2025-05-18 12:40:31 (42480): Guest Log: Successfully finished the ATLAS job!
2025-05-18 12:40:31 (42480): Guest Log: Copying the results back to the shared directory!
2025-05-18 12:40:32 (42480): Guest Log:  *** Contents of shared directory: ***
2025-05-18 12:40:32 (42480): Guest Log: total 399112
2025-05-18 12:40:32 (42480): Guest Log: -rwxrwxrwx. 1 root root 222896983 May 18 04:33 ATLAS.root_0
2025-05-18 12:40:32 (42480): Guest Log: -rwxrwxrwx. 1 root root 184055081 May 18 11:40 HITS.pool.root.1
2025-05-18 12:40:32 (42480): Guest Log: -rwxrwxrwx. 1 root root     11749 May 18 04:33 init_data.xml
2025-05-18 12:40:32 (42480): Guest Log: -rwxrwxrwx. 1 root root    508875 May 17 19:56 input.tar.gz
2025-05-18 12:40:32 (42480): Guest Log: -rwxrwxrwx. 1 root root   2334720 May 18 11:40 result.tar.gz
2025-05-18 12:40:32 (42480): Guest Log: -rwxrwxrwx. 1 root root     17569 May 17 19:56 start_atlas.sh
2025-05-18 12:40:33 (42480): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-18 12:40:33 (42480): VM Completion File Detected.
2025-05-18 12:40:33 (42480): Powering off VM.
2025-05-18 12:40:34 (42480): Successfully stopped VM.
2025-05-18 12:40:34 (42480): Deregistering VM. (boinc_80b44b08ceb5ab26, slot#0)
2025-05-18 12:40:35 (42480): Removing network bandwidth throttle group from VM.
2025-05-18 12:40:35 (42480): Removing VM from VirtualBox.
12:40:40 (42480): called boinc_finish(0)

</stderr_txt>
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