Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:39:38 (3493485): wrapper (7.7.26015): starting
15:39:38 (3493485): wrapper: running run_atlas (--nthreads 8)
[2025-05-17 15:39:38] Arguments: --nthreads 8
[2025-05-17 15:39:38] Threads: 8
[2025-05-17 15:39:38] Checking for CVMFS
[2025-05-17 15:39:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 15:39:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 15:39:39] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 15:39:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 15:39:40] 2.12.6.0 8763 7298 330164 146111 1 748 20458899 32935936 49466 16776704 0 103647563 99.611 102970842 36849 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-17 15:39:40] CVMFS is ok
[2025-05-17 15:39:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-17 15:39:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-17 15:39:40] Further information can be found at the LHC@home message board.
[2025-05-17 15:39:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 15:39:40] Checking for apptainer binary...
[2025-05-17 15:39:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 15:39:40] Running /usr/bin/apptainer --version
[2025-05-17 15:39:40] apptainer version 1.4.0-1.el9
[2025-05-17 15:39:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 15:39:40] c7-9-14.aglt2.org
[2025-05-17 15:39:40] apptainer works
[2025-05-17 15:39:40] Set ATHENA_PROC_NUMBER=8
[2025-05-17 15:39:40] Set ATHENA_CORE_NUMBER=8
[2025-05-17 15:39:40] Starting ATLAS job with PandaID=6656345506
[2025-05-17 15:39:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 16:58:11]  *** The last 200 lines of the pilot log: ***
[2025-05-17 16:58:11]  filetype=log
[2025-05-17 16:58:11]  guid=680e65af-9476-4c4c-afeb-926d9d922647
[2025-05-17 16:58:11]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-17 16:58:11]  is_altstaged=None
[2025-05-17 16:58:11]  is_tar=False
[2025-05-17 16:58:11]  lfn=log.44638099._057285.job.log.tgz.1
[2025-05-17 16:58:11]  mtime=0
[2025-05-17 16:58:11]  protocol_id=None
[2025-05-17 16:58:11]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-17 16:58:11]  replicas=None
[2025-05-17 16:58:11]  scope=mc23_13p6TeV
[2025-05-17 16:58:11]  status=None
[2025-05-17 16:58:11]  status_code=0
[2025-05-17 16:58:11]  storage_token=
[2025-05-17 16:58:11]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6656345506/log.44638099._057285.job.log.tgz.1
[2025-05-17 16:58:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/84/5d/log.44638099._057285.job.log.tgz.1
[2025-05-17 16:58:11]  workdir=None
[2025-05-17 16:58:11] ]
[2025-05-17 16:58:11] 2025-05-17 20:57:44,739 | INFO     | transferring file log.44638099._057285.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6656345506/log.44638099._057285.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-05-17 16:58:11] 2025-05-17 20:57:44,739 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6656345506/log.44638099._057285.job.log.tgz.1 /tmp/boinchome/slots/3/log.44638099._057285.job
[2025-05-17 16:58:11] 2025-05-17 20:57:44,759 | INFO     | adding to output.list: log.44638099._057285.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/84/5d/log.44638099._057285.job.log.tg
[2025-05-17 16:58:11] 2025-05-17 20:57:44,759 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-17 16:58:11] 2025-05-17 20:57:44,759 | INFO     | summary of transferred files:
[2025-05-17 16:58:11] 2025-05-17 20:57:44,759 | INFO     |  -- lfn=log.44638099._057285.job.log.tgz.1, status_code=0, status=transferred
[2025-05-17 16:58:11] 2025-05-17 20:57:44,759 | INFO     | stage-out finished correctly
[2025-05-17 16:58:11] 2025-05-17 20:57:45,462 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-17 16:58:11] 2025-05-17 20:57:47,051 | INFO     | job 6656345506 has state=finished
[2025-05-17 16:58:11] 2025-05-17 20:57:47,051 | INFO     | preparing for final server update for job 6656345506 in state='finished'
[2025-05-17 16:58:11] 2025-05-17 20:57:47,051 | INFO     | this job has now completed (state=finished)
[2025-05-17 16:58:11] 2025-05-17 20:57:47,051 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-17 16:58:11] 2025-05-17 20:57:47,051 | INFO     | log transfer has been attempted: DONE
[2025-05-17 16:58:11] 2025-05-17 20:57:47,052 | INFO     | job 6656345506 has finished - writing final server update
[2025-05-17 16:58:11] 2025-05-17 20:57:47,052 | INFO     | total number of processed events: 400 (read)
[2025-05-17 16:58:11] 2025-05-17 20:57:47,069 | INFO     | executing command: lscpu
[2025-05-17 16:58:11] 2025-05-17 20:57:47,128 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-17 16:58:11] 2025-05-17 20:57:49,987 | WARNING  | process 3541321 can no longer be monitored (due to stat problems) - aborting
[2025-05-17 16:58:11] 2025-05-17 20:57:49,987 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6656345506/memory_monitor_summary.json (trf name=prmon)
[2025-05-17 16:58:11] 2025-05-17 20:57:50,374 | INFO     | number of running child processes to parent process 3541321: 1
[2025-05-17 16:58:11] 2025-05-17 20:57:50,375 | INFO     | maximum number of monitored processes: 6
[2025-05-17 16:58:11] 2025-05-17 20:57:51,309 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-17 16:58:11] 2025-05-17 20:57:51,309 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6656345506/memory_monitor_summary.json (trf name=prmon)
[2025-05-17 16:58:11] 2025-05-17 20:57:51,310 | INFO     | extracted standard info from prmon json
[2025-05-17 16:58:11] 2025-05-17 20:57:51,310 | INFO     | extracted standard memory fields from prmon json
[2025-05-17 16:58:11] 2025-05-17 20:57:51,310 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-17 16:58:11] 2025-05-17 20:57:51,310 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-17 16:58:11] 2025-05-17 20:57:51,310 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-17 16:58:11] 2025-05-17 20:57:51,311 | INFO     | fitting pss+swap vs Time
[2025-05-17 16:58:11] 2025-05-17 20:57:51,311 | INFO     | sum of square deviations: 97479037.0
[2025-05-17 16:58:11] 2025-05-17 20:57:51,312 | INFO     | sum of deviations: 16626959161.000002
[2025-05-17 16:58:11] 2025-05-17 20:57:51,312 | INFO     | mean x: 1747513273.5
[2025-05-17 16:58:11] 2025-05-17 20:57:51,312 | INFO     | mean y: 2055126.4411764706
[2025-05-17 16:58:11] 2025-05-17 20:57:51,312 | INFO     | -- intersect: -298070563623.2694
[2025-05-17 16:58:11] 2025-05-17 20:57:51,312 | INFO     | intersect: -298070563623.2694
[2025-05-17 16:58:11] 2025-05-17 20:57:51,312 | INFO     | chi2: 1.838793495718331
[2025-05-17 16:58:11] 2025-05-17 20:57:51,312 | INFO     | -- intersect: -298070563623.2694
[2025-05-17 16:58:11] 2025-05-17 20:57:51,312 | INFO     | current memory leak: 170.57 B/s (using 68 data points, chi2=1.84)
[2025-05-17 16:58:11] 2025-05-17 20:57:51,312 | INFO     | ..............................
[2025-05-17 16:58:11] 2025-05-17 20:57:51,312 | INFO     | . Timing measurements:
[2025-05-17 16:58:11] 2025-05-17 20:57:51,312 | INFO     | . get job = 0 s
[2025-05-17 16:58:11] 2025-05-17 20:57:51,312 | INFO     | . initial setup = 4 s
[2025-05-17 16:58:11] 2025-05-17 20:57:51,312 | INFO     | . payload setup = 22 s
[2025-05-17 16:58:11] 2025-05-17 20:57:51,312 | INFO     | . stage-in = 0 s
[2025-05-17 16:58:11] 2025-05-17 20:57:51,312 | INFO     | . payload execution = 4546 s
[2025-05-17 16:58:11] 2025-05-17 20:57:51,313 | INFO     | . stage-out = 0 s
[2025-05-17 16:58:11] 2025-05-17 20:57:51,313 | INFO     | . log creation = 0 s
[2025-05-17 16:58:11] 2025-05-17 20:57:51,313 | INFO     | ..............................
[2025-05-17 16:58:11] 2025-05-17 20:57:51,366 | INFO     | 
[2025-05-17 16:58:11] 2025-05-17 20:57:51,366 | INFO     | job summary report
[2025-05-17 16:58:11] 2025-05-17 20:57:51,366 | INFO     | --------------------------------------------------
[2025-05-17 16:58:11] 2025-05-17 20:57:51,366 | INFO     | PanDA job id: 6656345506
[2025-05-17 16:58:11] 2025-05-17 20:57:51,367 | INFO     | task id: 44638099
[2025-05-17 16:58:11] 2025-05-17 20:57:51,367 | INFO     | errors: (none)
[2025-05-17 16:58:11] 2025-05-17 20:57:51,367 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 16:58:11] 2025-05-17 20:57:51,367 | INFO     | pilot state: finished 
[2025-05-17 16:58:11] 2025-05-17 20:57:51,367 | INFO     | transexitcode: 0
[2025-05-17 16:58:11] 2025-05-17 20:57:51,367 | INFO     | exeerrorcode: 0
[2025-05-17 16:58:11] 2025-05-17 20:57:51,367 | INFO     | exeerrordiag: 
[2025-05-17 16:58:11] 2025-05-17 20:57:51,367 | INFO     | exitcode: 0
[2025-05-17 16:58:11] 2025-05-17 20:57:51,367 | INFO     | exitmsg: OK
[2025-05-17 16:58:11] 2025-05-17 20:57:51,367 | INFO     | cpuconsumptiontime: 27870 s
[2025-05-17 16:58:11] 2025-05-17 20:57:51,367 | INFO     | nevents: 400
[2025-05-17 16:58:11] 2025-05-17 20:57:51,367 | INFO     | neventsw: 0
[2025-05-17 16:58:11] 2025-05-17 20:57:51,367 | INFO     | pid: 3541321
[2025-05-17 16:58:11] 2025-05-17 20:57:51,367 | INFO     | pgrp: 3541321
[2025-05-17 16:58:11] 2025-05-17 20:57:51,367 | INFO     | corecount: 8
[2025-05-17 16:58:11] 2025-05-17 20:57:51,367 | INFO     | event service: False
[2025-05-17 16:58:11] 2025-05-17 20:57:51,367 | INFO     | sizes: {0: 2393441, 1: 2393640, 12: 2393640, 23: 2393668, 30: 2393902, 34: 2393930, 4572: 2420178, 4574: 2429119, 4575: 2429175, 4580: 2429345}
[2025-05-17 16:58:11] 2025-05-17 20:57:51,367 | INFO     | --------------------------------------------------
[2025-05-17 16:58:11] 2025-05-17 20:57:51,367 | INFO     | 
[2025-05-17 16:58:11] 2025-05-17 20:57:51,367 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-05-17 16:58:11] 2025-05-17 20:57:51,382 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 16:58:11] 2025-05-17 20:57:51,383 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 16:58:11] 2025-05-17 20:57:51,383 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 16:58:11] 2025-05-17 20:57:51,383 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 16:58:11] 2025-05-17 20:57:51,383 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 16:58:11] 2025-05-17 20:57:51,383 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 16:58:11] 2025-05-17 20:57:51,383 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 16:58:11] 2025-05-17 20:57:51,383 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 16:58:11] 2025-05-17 20:57:51,383 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 16:58:11] 2025-05-17 20:57:51,383 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 16:58:11] 2025-05-17 20:57:51,383 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 16:58:11] 2025-05-17 20:57:51,383 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 16:58:11] 2025-05-17 20:57:51,383 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 16:58:11] 2025-05-17 20:57:51,383 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 16:58:11] 2025-05-17 20:57:51,383 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 16:58:11] 2025-05-17 20:57:51,383 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 16:58:11] 2025-05-17 20:57:51,383 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 16:58:11] 2025-05-17 20:57:51,383 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 16:58:11] 2025-05-17 20:57:51,383 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 16:58:11] 2025-05-17 20:57:51,383 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 16:58:11] 2025-05-17 20:57:51,383 | INFO     | job 6656345506 has completed (purged errors)
[2025-05-17 16:58:11] 2025-05-17 20:57:51,383 | INFO     | overall cleanup function is called
[2025-05-17 16:58:11] 2025-05-17 20:57:52,390 | INFO     | --- collectZombieJob: --- 10, [3541321]
[2025-05-17 16:58:11] 2025-05-17 20:57:52,391 | INFO     | zombie collector waiting for pid 3541321
[2025-05-17 16:58:11] 2025-05-17 20:57:52,391 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 16:58:11] 2025-05-17 20:57:52,391 | INFO     | collected zombie processes
[2025-05-17 16:58:11] 2025-05-17 20:57:52,391 | INFO     | will attempt to kill all subprocesses of pid=3541321
[2025-05-17 16:58:11] 2025-05-17 20:57:52,828 | INFO     | process IDs to be killed: [3541321] (in reverse order)
[2025-05-17 16:58:11] 2025-05-17 20:57:53,005 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 16:58:11] 2025-05-17 20:57:53,005 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 16:58:11] 2025-05-17 20:57:53,031 | INFO     | did not find any defunct processes belonging to 3541321
[2025-05-17 16:58:11] 2025-05-17 20:57:53,056 | INFO     | did not find any defunct processes belonging to 3541321
[2025-05-17 16:58:11] 2025-05-17 20:57:53,056 | INFO     | ready for new job
[2025-05-17 16:58:11] 2025-05-17 20:57:53,056 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 16:58:11] 2025-05-17 20:57:53,057 | INFO     | **************************************
[2025-05-17 16:58:11] 2025-05-17 20:57:53,058 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 16:58:11] 2025-05-17 20:57:53,058 | INFO     | **************************************
[2025-05-17 16:58:11] 2025-05-17 20:57:53,058 | INFO     | 
[2025-05-17 16:58:11] 2025-05-17 20:57:53,074 | INFO     | architecture information:
[2025-05-17 16:58:11] 2025-05-17 20:57:53,074 | INFO     | executing command: cat /etc/os-release
[2025-05-17 16:58:11] 2025-05-17 20:57:53,088 | INFO     | cat /etc/os-release:
[2025-05-17 16:58:11] NAME="CentOS Linux"
[2025-05-17 16:58:11] VERSION="7 (Core)"
[2025-05-17 16:58:11] ID="centos"
[2025-05-17 16:58:11] ID_LIKE="rhel fedora"
[2025-05-17 16:58:11] VERSION_ID="7"
[2025-05-17 16:58:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 16:58:11] ANSI_COLOR="0;31"
[2025-05-17 16:58:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 16:58:11] HOME_URL="https://www.centos.org/"
[2025-05-17 16:58:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 16:58:11] 
[2025-05-17 16:58:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 16:58:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 16:58:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 16:58:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 16:58:11] 
[2025-05-17 16:58:11] 2025-05-17 20:57:53,088 | INFO     | **************************************
[2025-05-17 16:58:11] 2025-05-17 20:57:53,589 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-05-17 16:58:11] 2025-05-17 20:57:53,610 | INFO     | sufficient remaining disk space (75974574080 B)
[2025-05-17 16:58:11] 2025-05-17 20:57:53,611 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 16:58:11] 2025-05-17 20:57:53,611 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 16:58:11] 2025-05-17 20:57:53,611 | INFO     | update_server=False
[2025-05-17 16:58:11] 2025-05-17 20:57:53,611 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 16:58:11] 2025-05-17 20:57:53,611 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 16:58:11] 2025-05-17 20:57:53,611 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-17 16:58:11] 2025-05-17 20:57:53,612 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 16:58:11] 2025-05-17 20:57:53,612 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 16:58:11] 2025-05-17 20:57:53,612 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 16:58:11] 2025-05-17 20:57:53,861 | INFO     | all payload control threads have been joined
[2025-05-17 16:58:11] 2025-05-17 20:57:53,882 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 16:58:11] 2025-05-17 20:57:53,883 | INFO     | aborting loop
[2025-05-17 16:58:11] 2025-05-17 20:57:54,062 | INFO     | all data control threads have been joined
[2025-05-17 16:58:11] 2025-05-17 20:57:54,616 | INFO     | [job] retrieve thread has finished
[2025-05-17 16:58:11] 2025-05-17 20:57:54,712 | INFO     | [data] copytool_in thread has finished
[2025-05-17 16:58:11] 2025-05-17 20:57:54,801 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 16:58:11] 2025-05-17 20:57:54,868 | INFO     | [payload] control thread has finished
[2025-05-17 16:58:11] 2025-05-17 20:57:54,888 | INFO     | [job] job monitor thread has finished
[2025-05-17 16:58:11] 2025-05-17 20:57:55,018 | INFO     | [payload] failed_post thread has finished
[2025-05-17 16:58:11] 2025-05-17 20:57:55,068 | INFO     | [data] control thread has finished
[2025-05-17 16:58:11] 2025-05-17 20:57:55,157 | INFO     | all job control threads have been joined
[2025-05-17 16:58:11] 2025-05-17 20:57:55,492 | INFO     | [job] validate thread has finished
[2025-05-17 16:58:11] 2025-05-17 20:57:55,547 | INFO     | [payload] validate_post thread has finished
[2025-05-17 16:58:11] 2025-05-17 20:57:55,617 | INFO     | [data] copytool_out thread has finished
[2025-05-17 16:58:11] 2025-05-17 20:57:55,795 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 16:58:11] 2025-05-17 20:57:55,877 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 16:58:11] 2025-05-17 20:57:56,015 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 16:58:11] 2025-05-17 20:57:56,163 | INFO     | [job] control thread has finished
[2025-05-17 16:58:11] 2025-05-17 20:57:56,377 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 16:58:11] 2025-05-17 20:57:57,383 | INFO     | [job] queue monitor thread has finished
[2025-05-17 16:58:11] 2025-05-17 20:58:00,021 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 16:58:11] 2025-05-17 20:58:04,029 | INFO     | job.realtimelogging is not enabled
[2025-05-17 16:58:11] 2025-05-17 20:58:05,034 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 16:58:11] 2025-05-17 20:58:05,513 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140590374954816)>', '<ExcThread(monitor, started 140589882390272)>']
[2025-05-17 16:58:11] 2025-05-17 20:58:05,666 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 16:58:11] 2025-05-17 20:58:05,666 | INFO     | [monitor] control thread has ended
[2025-05-17 16:58:11] 2025-05-17 20:58:10,537 | INFO     | all workflow threads have been joined
[2025-05-17 16:58:11] 2025-05-17 20:58:10,538 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 16:58:11] 2025-05-17 20:58:10,538 | INFO     | traces error code: 0
[2025-05-17 16:58:11] 2025-05-17 20:58:10,538 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 16:58:11] 2025-05-17 20:58:10,671 [wrapper] ==== pilot stdout END ====
[2025-05-17 16:58:11] 2025-05-17 20:58:10,674 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 16:58:11] 2025-05-17 20:58:10,677 [wrapper] pilotpid: 3511519
[2025-05-17 16:58:11] 2025-05-17 20:58:10,679 [wrapper] Pilot exit status: 0
[2025-05-17 16:58:11] 2025-05-17 20:58:10,691 [wrapper] pandaids: 6656345506
[2025-05-17 16:58:11] 2025-05-17 20:58:10,815 [wrapper] cleanup supervisor_pilot 1354320 3511520
[2025-05-17 16:58:11] 2025-05-17 20:58:10,819 [wrapper] Test setup, not cleaning
[2025-05-17 16:58:11] 2025-05-17 20:58:10,821 [wrapper] apfmon messages muted
[2025-05-17 16:58:11] 2025-05-17 20:58:10,823 [wrapper] ==== wrapper stdout END ====
[2025-05-17 16:58:11] 2025-05-17 20:58:10,827 [wrapper] ==== wrapper stderr END ====
[2025-05-17 16:58:11]  *** Error codes and diagnostics ***
[2025-05-17 16:58:11]     "exeErrorCode": 0,
[2025-05-17 16:58:11]     "exeErrorDiag": "",
[2025-05-17 16:58:11]     "pilotErrorCode": 0,
[2025-05-17 16:58:11]     "pilotErrorDiag": "",
[2025-05-17 16:58:11]  *** Listing of results directory ***
[2025-05-17 16:58:11] total 415876
[2025-05-17 16:58:11] -rw-r--r--. 1 boincer umatlas    495897 May 17 15:15 pilot3.tar.gz
[2025-05-17 16:58:11] -rwx------. 1 boincer umatlas     37140 May 17 15:38 runpilot2-wrapper.sh
[2025-05-17 16:58:11] -rw-r--r--. 1 boincer umatlas      5111 May 17 15:38 queuedata.json
[2025-05-17 16:58:11] -rw-r--r--. 1 boincer umatlas       100 May 17 15:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 16:58:11] -rwxr-xr-x. 1 boincer umatlas      7986 May 17 15:39 run_atlas
[2025-05-17 16:58:11] -rw-r--r--. 1 boincer umatlas       105 May 17 15:39 job.xml
[2025-05-17 16:58:11] -rw-r--r--. 2 boincer umatlas 221510493 May 17 15:39 EVNT.44638096._001984.pool.root.1
[2025-05-17 16:58:11] -rw-r--r--. 2 boincer umatlas     17569 May 17 15:39 start_atlas.sh
[2025-05-17 16:58:11] drwxrwx--x. 2 boincer umatlas      4096 May 17 15:39 shared
[2025-05-17 16:58:11] -rw-r--r--. 2 boincer umatlas    508882 May 17 15:39 input.tar.gz
[2025-05-17 16:58:11] -rw-r--r--. 1 boincer umatlas         0 May 17 15:39 boinc_lockfile
[2025-05-17 16:58:11] -rw-r--r--. 1 boincer umatlas      2539 May 17 15:39 pandaJob.out
[2025-05-17 16:58:11] -rw-------. 1 boincer umatlas       467 May 17 15:39 setup.sh.local
[2025-05-17 16:58:11] -rw-------. 1 boincer umatlas    994635 May 17 15:40 agis_schedconf.cvmfs.json
[2025-05-17 16:58:11] -rw-------. 1 boincer umatlas   1596741 May 17 15:40 agis_ddmendpoints.agis.ALL.json
[2025-05-17 16:58:11] drwx------. 4 boincer umatlas      4096 May 17 15:40 pilot3
[2025-05-17 16:58:11] -rw-r--r--. 1 boincer umatlas      7159 May 17 16:56 init_data.xml
[2025-05-17 16:58:11] -rw-------. 1 boincer umatlas 198989074 May 17 16:57 HITS.44638099._057285.pool.root.1
[2025-05-17 16:58:11] -rw-r--r--. 1 boincer umatlas       529 May 17 16:57 boinc_task_state.xml
[2025-05-17 16:58:11] -rw-------. 1 boincer umatlas      1034 May 17 16:57 memory_monitor_summary.json
[2025-05-17 16:58:11] -rw-------. 1 boincer umatlas        95 May 17 16:57 pilot_heartbeat.json
[2025-05-17 16:58:11] -rw-------. 1 boincer umatlas    304984 May 17 16:57 log.44638099._057285.job.log.tgz.1
[2025-05-17 16:58:11] -rw-------. 1 boincer umatlas      7693 May 17 16:57 heartbeat.json
[2025-05-17 16:58:11] -rw-r--r--. 1 boincer umatlas        27 May 17 16:58 wrapper_checkpoint.txt
[2025-05-17 16:58:11] -rw-r--r--. 1 boincer umatlas      8192 May 17 16:58 boinc_mmap_file
[2025-05-17 16:58:11] -rw-------. 1 boincer umatlas      4548 May 17 16:58 pilotlog.txt
[2025-05-17 16:58:11] -rw-------. 1 boincer umatlas    451565 May 17 16:58 log.44638099._057285.job.log.1
[2025-05-17 16:58:11] -rw-------. 1 boincer umatlas       357 May 17 16:58 output.list
[2025-05-17 16:58:11] -rw-r--r--. 1 boincer umatlas       620 May 17 16:58 runtime_log
[2025-05-17 16:58:11] -rw-------. 1 boincer umatlas    778240 May 17 16:58 result.tar.gz
[2025-05-17 16:58:11] -rw-r--r--. 1 boincer umatlas     11413 May 17 16:58 runtime_log.err
[2025-05-17 16:58:11] -rw-------. 1 boincer umatlas       651 May 17 16:58 kNQMDmzXca7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtmOKDmN5OXbn.diag
[2025-05-17 16:58:11] -rw-r--r--. 1 boincer umatlas     21253 May 17 16:58 stderr.txt
[2025-05-17 16:58:11] HITS file was successfully produced:
[2025-05-17 16:58:11] -rw-------. 1 boincer umatlas 198989074 May 17 16:57 shared/HITS.pool.root.1
[2025-05-17 16:58:11]  *** Contents of shared directory: ***
[2025-05-17 16:58:11] total 411932
[2025-05-17 16:58:11] -rw-r--r--. 2 boincer umatlas 221510493 May 17 15:39 ATLAS.root_0
[2025-05-17 16:58:11] -rw-r--r--. 2 boincer umatlas     17569 May 17 15:39 start_atlas.sh
[2025-05-17 16:58:11] -rw-r--r--. 2 boincer umatlas    508882 May 17 15:39 input.tar.gz
[2025-05-17 16:58:11] -rw-------. 1 boincer umatlas 198989074 May 17 16:57 HITS.pool.root.1
[2025-05-17 16:58:11] -rw-------. 1 boincer umatlas    778240 May 17 16:58 result.tar.gz
16:58:12 (3493485): run_atlas exited; CPU time 28026.037708
16:58:12 (3493485): called boinc_finish(0)

</stderr_txt>
]]>

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