Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:39:12 (3485350): wrapper (7.7.26015): starting
15:39:12 (3485350): wrapper: running run_atlas (--nthreads 8)
[2025-05-17 15:39:12] Arguments: --nthreads 8
[2025-05-17 15:39:12] Threads: 8
[2025-05-17 15:39:12] Checking for CVMFS
[2025-05-17 15:39:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 15:39:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 15:39:13] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 15:39:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 15:39:14] 2.12.6.0 8763 7298 330828 146111 2 748 20456985 32935936 48892 16776704 0 103640090 99.611 102970842 36849 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-17 15:39:14] CVMFS is ok
[2025-05-17 15:39:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-17 15:39:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-17 15:39:14] Further information can be found at the LHC@home message board.
[2025-05-17 15:39:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 15:39:14] Checking for apptainer binary...
[2025-05-17 15:39:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 15:39:14] Running /usr/bin/apptainer --version
[2025-05-17 15:39:14] apptainer version 1.4.0-1.el9
[2025-05-17 15:39:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 15:39:14] c7-9-14.aglt2.org
[2025-05-17 15:39:14] apptainer works
[2025-05-17 15:39:14] Set ATHENA_PROC_NUMBER=8
[2025-05-17 15:39:14] Set ATHENA_CORE_NUMBER=8
[2025-05-17 15:39:14] Starting ATLAS job with PandaID=6656345434
[2025-05-17 15:39:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 16:58:35]  *** The last 200 lines of the pilot log: ***
[2025-05-17 16:58:35]  status=None
[2025-05-17 16:58:35]  status_code=0
[2025-05-17 16:58:35]  storage_token=
[2025-05-17 16:58:35]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6656345434/log.44638099._057284.job.log.tgz.1
[2025-05-17 16:58:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5b/bf/log.44638099._057284.job.log.tgz.1
[2025-05-17 16:58:35]  workdir=None
[2025-05-17 16:58:35] ]
[2025-05-17 16:58:35] 2025-05-17 20:58:12,005 | INFO     | transferring file log.44638099._057284.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6656345434/log.44638099._057284.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-05-17 16:58:35] 2025-05-17 20:58:12,005 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6656345434/log.44638099._057284.job.log.tgz.1 /tmp/boinchome/slots/0/log.44638099._057284.job
[2025-05-17 16:58:35] 2025-05-17 20:58:12,024 | INFO     | adding to output.list: log.44638099._057284.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5b/bf/log.44638099._057284.job.log.tg
[2025-05-17 16:58:35] 2025-05-17 20:58:12,025 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-17 16:58:35] 2025-05-17 20:58:12,025 | INFO     | summary of transferred files:
[2025-05-17 16:58:35] 2025-05-17 20:58:12,025 | INFO     |  -- lfn=log.44638099._057284.job.log.tgz.1, status_code=0, status=transferred
[2025-05-17 16:58:35] 2025-05-17 20:58:12,025 | INFO     | stage-out finished correctly
[2025-05-17 16:58:35] 2025-05-17 20:58:15,471 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-17 16:58:35] 2025-05-17 20:58:15,956 | WARNING  | process 3531790 can no longer be monitored (due to stat problems) - aborting
[2025-05-17 16:58:35] 2025-05-17 20:58:15,956 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6656345434/memory_monitor_summary.json (trf name=prmon)
[2025-05-17 16:58:35] 2025-05-17 20:58:15,957 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6656345434/memory_monitor_summary.json (trf name=prmon)
[2025-05-17 16:58:35] 2025-05-17 20:58:15,958 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3017376 B
[2025-05-17 16:58:35] 2025-05-17 20:58:15,958 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15625 B
[2025-05-17 16:58:35] 2025-05-17 20:58:15,958 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-17 16:58:35] 2025-05-17 20:58:15,973 | INFO     | sufficient remaining disk space (76203163648 B)
[2025-05-17 16:58:35] 2025-05-17 20:58:15,973 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-05-17 16:58:35] 2025-05-17 20:58:15,974 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6656345434: 3315749 B (within 2537553920 B limit)
[2025-05-17 16:58:35] 2025-05-17 20:58:15,974 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6656345434/HITS.44638099._057284.pool.root.1 does not exist (skip from workdir size calculation)
[2025-05-17 16:58:35] 2025-05-17 20:58:15,974 | INFO     | total size of present files: 0 B (workdir size: 3315749 B)
[2025-05-17 16:58:35] 2025-05-17 20:58:15,974 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6656345434/HITS.44638099._057284.pool.root.1 since it does not exist
[2025-05-17 16:58:35] 2025-05-17 20:58:16,335 | INFO     | job 6656345434 has state=finished
[2025-05-17 16:58:35] 2025-05-17 20:58:16,335 | INFO     | preparing for final server update for job 6656345434 in state='finished'
[2025-05-17 16:58:35] 2025-05-17 20:58:16,336 | INFO     | this job has now completed (state=finished)
[2025-05-17 16:58:35] 2025-05-17 20:58:16,336 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-17 16:58:35] 2025-05-17 20:58:16,336 | INFO     | log transfer has been attempted: DONE
[2025-05-17 16:58:35] 2025-05-17 20:58:16,336 | INFO     | job 6656345434 has finished - writing final server update
[2025-05-17 16:58:35] 2025-05-17 20:58:16,336 | INFO     | total number of processed events: 400 (read)
[2025-05-17 16:58:35] 2025-05-17 20:58:16,354 | INFO     | executing command: lscpu
[2025-05-17 16:58:35] 2025-05-17 20:58:16,407 | INFO     | number of running child processes to parent process 3531790: 1
[2025-05-17 16:58:35] 2025-05-17 20:58:16,407 | INFO     | maximum number of monitored processes: 6
[2025-05-17 16:58:35] 2025-05-17 20:58:16,440 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-17 16:58:35] 2025-05-17 20:58:18,908 | INFO     | monitor loop #350: job 0:6656345434 is in state 'finished'
[2025-05-17 16:58:35] 2025-05-17 20:58:18,908 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 16:58:35] 2025-05-17 20:58:20,017 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-17 16:58:35] 2025-05-17 20:58:20,017 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6656345434/memory_monitor_summary.json (trf name=prmon)
[2025-05-17 16:58:35] 2025-05-17 20:58:20,018 | INFO     | extracted standard info from prmon json
[2025-05-17 16:58:35] 2025-05-17 20:58:20,018 | INFO     | extracted standard memory fields from prmon json
[2025-05-17 16:58:35] 2025-05-17 20:58:20,018 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-17 16:58:35] 2025-05-17 20:58:20,018 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-17 16:58:35] 2025-05-17 20:58:20,018 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-17 16:58:35] 2025-05-17 20:58:20,019 | INFO     | fitting pss+swap vs Time
[2025-05-17 16:58:35] 2025-05-17 20:58:20,020 | INFO     | sum of square deviations: 97479037.0
[2025-05-17 16:58:35] 2025-05-17 20:58:20,020 | INFO     | sum of deviations: 17309860017.000004
[2025-05-17 16:58:35] 2025-05-17 20:58:20,020 | INFO     | mean x: 1747513263.5
[2025-05-17 16:58:35] 2025-05-17 20:58:20,020 | INFO     | mean y: 2067938.0882352942
[2025-05-17 16:58:35] 2025-05-17 20:58:20,020 | INFO     | -- intersect: -310312958758.73724
[2025-05-17 16:58:35] 2025-05-17 20:58:20,020 | INFO     | intersect: -310312958758.73724
[2025-05-17 16:58:35] 2025-05-17 20:58:20,020 | INFO     | chi2: 2.1347603679058698
[2025-05-17 16:58:35] 2025-05-17 20:58:20,020 | INFO     | -- intersect: -310312958758.73724
[2025-05-17 16:58:35] 2025-05-17 20:58:20,020 | INFO     | current memory leak: 177.58 B/s (using 68 data points, chi2=2.13)
[2025-05-17 16:58:35] 2025-05-17 20:58:20,021 | INFO     | ..............................
[2025-05-17 16:58:35] 2025-05-17 20:58:20,021 | INFO     | . Timing measurements:
[2025-05-17 16:58:35] 2025-05-17 20:58:20,021 | INFO     | . get job = 0 s
[2025-05-17 16:58:35] 2025-05-17 20:58:20,021 | INFO     | . initial setup = 4 s
[2025-05-17 16:58:35] 2025-05-17 20:58:20,021 | INFO     | . payload setup = 29 s
[2025-05-17 16:58:35] 2025-05-17 20:58:20,021 | INFO     | . stage-in = 0 s
[2025-05-17 16:58:35] 2025-05-17 20:58:20,021 | INFO     | . payload execution = 4588 s
[2025-05-17 16:58:35] 2025-05-17 20:58:20,021 | INFO     | . stage-out = 0 s
[2025-05-17 16:58:35] 2025-05-17 20:58:20,021 | INFO     | . log creation = 0 s
[2025-05-17 16:58:35] 2025-05-17 20:58:20,021 | INFO     | ..............................
[2025-05-17 16:58:35] 2025-05-17 20:58:20,404 | INFO     | 
[2025-05-17 16:58:35] 2025-05-17 20:58:20,405 | INFO     | job summary report
[2025-05-17 16:58:35] 2025-05-17 20:58:20,405 | INFO     | --------------------------------------------------
[2025-05-17 16:58:35] 2025-05-17 20:58:20,405 | INFO     | PanDA job id: 6656345434
[2025-05-17 16:58:35] 2025-05-17 20:58:20,405 | INFO     | task id: 44638099
[2025-05-17 16:58:35] 2025-05-17 20:58:20,405 | INFO     | errors: (none)
[2025-05-17 16:58:35] 2025-05-17 20:58:20,405 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 16:58:35] 2025-05-17 20:58:20,405 | INFO     | pilot state: finished 
[2025-05-17 16:58:35] 2025-05-17 20:58:20,405 | INFO     | transexitcode: 0
[2025-05-17 16:58:35] 2025-05-17 20:58:20,405 | INFO     | exeerrorcode: 0
[2025-05-17 16:58:35] 2025-05-17 20:58:20,405 | INFO     | exeerrordiag: 
[2025-05-17 16:58:35] 2025-05-17 20:58:20,405 | INFO     | exitcode: 0
[2025-05-17 16:58:35] 2025-05-17 20:58:20,405 | INFO     | exitmsg: OK
[2025-05-17 16:58:35] 2025-05-17 20:58:20,405 | INFO     | cpuconsumptiontime: 29010 s
[2025-05-17 16:58:35] 2025-05-17 20:58:20,405 | INFO     | nevents: 400
[2025-05-17 16:58:35] 2025-05-17 20:58:20,405 | INFO     | neventsw: 0
[2025-05-17 16:58:35] 2025-05-17 20:58:20,405 | INFO     | pid: 3531790
[2025-05-17 16:58:35] 2025-05-17 20:58:20,405 | INFO     | pgrp: 3531790
[2025-05-17 16:58:35] 2025-05-17 20:58:20,405 | INFO     | corecount: 8
[2025-05-17 16:58:35] 2025-05-17 20:58:20,405 | INFO     | event service: False
[2025-05-17 16:58:35] 2025-05-17 20:58:20,405 | INFO     | sizes: {0: 2393439, 1: 2393638, 2: 2393638, 12: 2393666, 23: 2393694, 25: 2393928, 34: 2394084, 4623: 2420087, 4624: 2429028, 4628: 2429084, 4632: 2429282}
[2025-05-17 16:58:35] 2025-05-17 20:58:20,405 | INFO     | --------------------------------------------------
[2025-05-17 16:58:35] 2025-05-17 20:58:20,406 | INFO     | 
[2025-05-17 16:58:35] 2025-05-17 20:58:20,406 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-17 16:58:35] 2025-05-17 20:58:20,423 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 16:58:35] 2025-05-17 20:58:20,424 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 16:58:35] 2025-05-17 20:58:20,424 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 16:58:35] 2025-05-17 20:58:20,424 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 16:58:35] 2025-05-17 20:58:20,424 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 16:58:35] 2025-05-17 20:58:20,424 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 16:58:35] 2025-05-17 20:58:20,424 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 16:58:35] 2025-05-17 20:58:20,424 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 16:58:35] 2025-05-17 20:58:20,424 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 16:58:35] 2025-05-17 20:58:20,424 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 16:58:35] 2025-05-17 20:58:20,424 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 16:58:35] 2025-05-17 20:58:20,424 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 16:58:35] 2025-05-17 20:58:20,424 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 16:58:35] 2025-05-17 20:58:20,424 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 16:58:35] 2025-05-17 20:58:20,424 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 16:58:35] 2025-05-17 20:58:20,424 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 16:58:35] 2025-05-17 20:58:20,424 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 16:58:35] 2025-05-17 20:58:20,424 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 16:58:35] 2025-05-17 20:58:20,424 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 16:58:35] 2025-05-17 20:58:20,424 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 16:58:35] 2025-05-17 20:58:20,424 | INFO     | job 6656345434 has completed (purged errors)
[2025-05-17 16:58:35] 2025-05-17 20:58:20,425 | INFO     | overall cleanup function is called
[2025-05-17 16:58:35] 2025-05-17 20:58:21,428 | INFO     | --- collectZombieJob: --- 10, [3531790]
[2025-05-17 16:58:35] 2025-05-17 20:58:21,428 | INFO     | zombie collector waiting for pid 3531790
[2025-05-17 16:58:35] 2025-05-17 20:58:21,428 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 16:58:35] 2025-05-17 20:58:21,428 | INFO     | collected zombie processes
[2025-05-17 16:58:35] 2025-05-17 20:58:21,428 | INFO     | will attempt to kill all subprocesses of pid=3531790
[2025-05-17 16:58:35] 2025-05-17 20:58:21,913 | INFO     | process IDs to be killed: [3531790] (in reverse order)
[2025-05-17 16:58:35] 2025-05-17 20:58:22,066 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 16:58:35] 2025-05-17 20:58:22,066 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 16:58:35] 2025-05-17 20:58:22,093 | INFO     | did not find any defunct processes belonging to 3531790
[2025-05-17 16:58:35] 2025-05-17 20:58:22,118 | INFO     | did not find any defunct processes belonging to 3531790
[2025-05-17 16:58:35] 2025-05-17 20:58:22,118 | INFO     | ready for new job
[2025-05-17 16:58:35] 2025-05-17 20:58:22,118 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 16:58:35] 2025-05-17 20:58:22,119 | INFO     | **************************************
[2025-05-17 16:58:35] 2025-05-17 20:58:22,120 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 16:58:35] 2025-05-17 20:58:22,120 | INFO     | **************************************
[2025-05-17 16:58:35] 2025-05-17 20:58:22,120 | INFO     | 
[2025-05-17 16:58:35] 2025-05-17 20:58:22,137 | INFO     | architecture information:
[2025-05-17 16:58:35] 2025-05-17 20:58:22,138 | INFO     | executing command: cat /etc/os-release
[2025-05-17 16:58:35] 2025-05-17 20:58:22,150 | INFO     | cat /etc/os-release:
[2025-05-17 16:58:35] NAME="CentOS Linux"
[2025-05-17 16:58:35] VERSION="7 (Core)"
[2025-05-17 16:58:35] ID="centos"
[2025-05-17 16:58:35] ID_LIKE="rhel fedora"
[2025-05-17 16:58:35] VERSION_ID="7"
[2025-05-17 16:58:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 16:58:35] ANSI_COLOR="0;31"
[2025-05-17 16:58:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 16:58:35] HOME_URL="https://www.centos.org/"
[2025-05-17 16:58:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 16:58:35] 
[2025-05-17 16:58:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 16:58:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 16:58:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 16:58:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 16:58:35] 
[2025-05-17 16:58:35] 2025-05-17 20:58:22,150 | INFO     | **************************************
[2025-05-17 16:58:35] 2025-05-17 20:58:22,653 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-17 16:58:35] 2025-05-17 20:58:22,669 | INFO     | sufficient remaining disk space (76207357952 B)
[2025-05-17 16:58:35] 2025-05-17 20:58:22,669 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 16:58:35] 2025-05-17 20:58:22,669 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 16:58:35] 2025-05-17 20:58:22,669 | INFO     | update_server=False
[2025-05-17 16:58:35] 2025-05-17 20:58:22,669 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 16:58:35] 2025-05-17 20:58:22,669 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 16:58:35] 2025-05-17 20:58:22,670 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 16:58:35] 2025-05-17 20:58:22,670 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-17 16:58:35] 2025-05-17 20:58:22,670 | INFO     | aborting loop
[2025-05-17 16:58:35] 2025-05-17 20:58:22,670 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 16:58:35] 2025-05-17 20:58:22,671 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 16:58:35] 2025-05-17 20:58:22,671 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 16:58:35] 2025-05-17 20:58:22,725 | INFO     | all data control threads have been joined
[2025-05-17 16:58:35] 2025-05-17 20:58:23,326 | INFO     | all job control threads have been joined
[2025-05-17 16:58:35] 2025-05-17 20:58:23,529 | INFO     | all payload control threads have been joined
[2025-05-17 16:58:35] 2025-05-17 20:58:23,671 | INFO     | [job] retrieve thread has finished
[2025-05-17 16:58:35] 2025-05-17 20:58:23,676 | INFO     | [job] job monitor thread has finished
[2025-05-17 16:58:35] 2025-05-17 20:58:23,730 | INFO     | [data] control thread has finished
[2025-05-17 16:58:35] 2025-05-17 20:58:24,295 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 16:58:35] 2025-05-17 20:58:24,332 | INFO     | [job] control thread has finished
[2025-05-17 16:58:35] 2025-05-17 20:58:24,534 | INFO     | [payload] control thread has finished
[2025-05-17 16:58:35] 2025-05-17 20:58:24,608 | INFO     | [payload] failed_post thread has finished
[2025-05-17 16:58:35] 2025-05-17 20:58:24,676 | INFO     | [data] copytool_out thread has finished
[2025-05-17 16:58:35] 2025-05-17 20:58:24,869 | INFO     | [data] copytool_in thread has finished
[2025-05-17 16:58:35] 2025-05-17 20:58:24,920 | INFO     | [payload] validate_post thread has finished
[2025-05-17 16:58:35] 2025-05-17 20:58:24,998 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 16:58:35] 2025-05-17 20:58:25,002 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 16:58:35] 2025-05-17 20:58:25,085 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 16:58:35] 2025-05-17 20:58:25,135 | INFO     | [job] validate thread has finished
[2025-05-17 16:58:35] 2025-05-17 20:58:25,137 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 16:58:35] 2025-05-17 20:58:26,036 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 16:58:35] 2025-05-17 20:58:26,089 | INFO     | [job] queue monitor thread has finished
[2025-05-17 16:58:35] 2025-05-17 20:58:30,043 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 16:58:35] 2025-05-17 20:58:30,493 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140424036276032)>', '<ExcThread(monitor, started 140423502731008)>']
[2025-05-17 16:58:35] 2025-05-17 20:58:30,710 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 16:58:35] 2025-05-17 20:58:30,710 | INFO     | [monitor] control thread has ended
[2025-05-17 16:58:35] 2025-05-17 20:58:35,506 | INFO     | all workflow threads have been joined
[2025-05-17 16:58:35] 2025-05-17 20:58:35,507 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 16:58:35] 2025-05-17 20:58:35,507 | INFO     | traces error code: 0
[2025-05-17 16:58:35] 2025-05-17 20:58:35,507 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 16:58:35] 2025-05-17 20:58:35,618 [wrapper] ==== pilot stdout END ====
[2025-05-17 16:58:35] 2025-05-17 20:58:35,621 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 16:58:35] 2025-05-17 20:58:35,623 [wrapper] pilotpid: 3501661
[2025-05-17 16:58:35] 2025-05-17 20:58:35,625 [wrapper] Pilot exit status: 0
[2025-05-17 16:58:35] 2025-05-17 20:58:35,632 [wrapper] pandaids: 6656345434
[2025-05-17 16:58:35] 2025-05-17 20:58:35,751 [wrapper] cleanup supervisor_pilot 1344798 3501662
[2025-05-17 16:58:35] 2025-05-17 20:58:35,754 [wrapper] Test setup, not cleaning
[2025-05-17 16:58:35] 2025-05-17 20:58:35,756 [wrapper] apfmon messages muted
[2025-05-17 16:58:35] 2025-05-17 20:58:35,757 [wrapper] ==== wrapper stdout END ====
[2025-05-17 16:58:35] 2025-05-17 20:58:35,759 [wrapper] ==== wrapper stderr END ====
[2025-05-17 16:58:35]  *** Error codes and diagnostics ***
[2025-05-17 16:58:35]     "exeErrorCode": 0,
[2025-05-17 16:58:35]     "exeErrorDiag": "",
[2025-05-17 16:58:35]     "pilotErrorCode": 0,
[2025-05-17 16:58:35]     "pilotErrorDiag": "",
[2025-05-17 16:58:35]  *** Listing of results directory ***
[2025-05-17 16:58:35] total 418048
[2025-05-17 16:58:35] -rw-r--r--. 1 boincer umatlas    495897 May 17 15:15 pilot3.tar.gz
[2025-05-17 16:58:35] -rwx------. 1 boincer umatlas     37140 May 17 15:38 runpilot2-wrapper.sh
[2025-05-17 16:58:35] -rw-r--r--. 1 boincer umatlas      5111 May 17 15:38 queuedata.json
[2025-05-17 16:58:35] -rw-r--r--. 1 boincer umatlas       100 May 17 15:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 16:58:35] -rwxr-xr-x. 1 boincer umatlas      7986 May 17 15:39 run_atlas
[2025-05-17 16:58:35] -rw-r--r--. 1 boincer umatlas       105 May 17 15:39 job.xml
[2025-05-17 16:58:35] -rw-r--r--. 2 boincer umatlas 219657176 May 17 15:39 EVNT.44638096._001000.pool.root.1
[2025-05-17 16:58:35] -rw-r--r--. 2 boincer umatlas     17569 May 17 15:39 start_atlas.sh
[2025-05-17 16:58:35] drwxrwx--x. 2 boincer umatlas      4096 May 17 15:39 shared
[2025-05-17 16:58:35] -rw-r--r--. 2 boincer umatlas    508880 May 17 15:39 input.tar.gz
[2025-05-17 16:58:35] -rw-r--r--. 1 boincer umatlas         0 May 17 15:39 boinc_lockfile
[2025-05-17 16:58:35] -rw-r--r--. 1 boincer umatlas      2538 May 17 15:39 pandaJob.out
[2025-05-17 16:58:35] -rw-------. 1 boincer umatlas       467 May 17 15:39 setup.sh.local
[2025-05-17 16:58:35] -rw-------. 1 boincer umatlas    994635 May 17 15:40 agis_schedconf.cvmfs.json
[2025-05-17 16:58:35] -rw-------. 1 boincer umatlas   1596741 May 17 15:40 agis_ddmendpoints.agis.ALL.json
[2025-05-17 16:58:35] drwx------. 4 boincer umatlas      4096 May 17 15:40 pilot3
[2025-05-17 16:58:35] -rw-r--r--. 1 boincer umatlas      7159 May 17 16:56 init_data.xml
[2025-05-17 16:58:35] -rw-------. 1 boincer umatlas 203061083 May 17 16:57 HITS.44638099._057284.pool.root.1
[2025-05-17 16:58:35] -rw-r--r--. 1 boincer umatlas       529 May 17 16:57 boinc_task_state.xml
[2025-05-17 16:58:35] -rw-------. 1 boincer umatlas      1034 May 17 16:58 memory_monitor_summary.json
[2025-05-17 16:58:35] -rw-------. 1 boincer umatlas        95 May 17 16:58 pilot_heartbeat.json
[2025-05-17 16:58:35] -rw-------. 1 boincer umatlas    296430 May 17 16:58 log.44638099._057284.job.log.tgz.1
[2025-05-17 16:58:35] -rw-------. 1 boincer umatlas      7694 May 17 16:58 heartbeat.json
[2025-05-17 16:58:35] -rw-r--r--. 1 boincer umatlas      8192 May 17 16:58 boinc_mmap_file
[2025-05-17 16:58:35] -rw-r--r--. 1 boincer umatlas        27 May 17 16:58 wrapper_checkpoint.txt
[2025-05-17 16:58:35] -rw-------. 1 boincer umatlas      4476 May 17 16:58 pilotlog.txt
[2025-05-17 16:58:35] -rw-------. 1 boincer umatlas    459375 May 17 16:58 log.44638099._057284.job.log.1
[2025-05-17 16:58:35] -rw-------. 1 boincer umatlas       357 May 17 16:58 output.list
[2025-05-17 16:58:35] -rw-r--r--. 1 boincer umatlas       620 May 17 16:58 runtime_log
[2025-05-17 16:58:35] -rw-------. 1 boincer umatlas    778240 May 17 16:58 result.tar.gz
[2025-05-17 16:58:35] -rw-r--r--. 1 boincer umatlas     11413 May 17 16:58 runtime_log.err
[2025-05-17 16:58:35] -rw-------. 1 boincer umatlas       651 May 17 16:58 CuOMDmzXca7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsmOKDmg5Ph4n.diag
[2025-05-17 16:58:35] -rw-r--r--. 1 boincer umatlas     22309 May 17 16:58 stderr.txt
[2025-05-17 16:58:35] HITS file was successfully produced:
[2025-05-17 16:58:35] -rw-------. 1 boincer umatlas 203061083 May 17 16:57 shared/HITS.pool.root.1
[2025-05-17 16:58:35]  *** Contents of shared directory: ***
[2025-05-17 16:58:35] total 414104
[2025-05-17 16:58:35] -rw-r--r--. 2 boincer umatlas 219657176 May 17 15:39 ATLAS.root_0
[2025-05-17 16:58:35] -rw-r--r--. 2 boincer umatlas     17569 May 17 15:39 start_atlas.sh
[2025-05-17 16:58:35] -rw-r--r--. 2 boincer umatlas    508880 May 17 15:39 input.tar.gz
[2025-05-17 16:58:35] -rw-------. 1 boincer umatlas 203061083 May 17 16:57 HITS.pool.root.1
[2025-05-17 16:58:35] -rw-------. 1 boincer umatlas    778240 May 17 16:58 result.tar.gz
16:58:37 (3485350): run_atlas exited; CPU time 29158.638592
16:58:37 (3485350): called boinc_finish(0)

</stderr_txt>
]]>

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