Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:52:55 (942793): wrapper (7.7.26015): starting
14:52:55 (942793): wrapper: running run_atlas (--nthreads 8)
[2025-05-17 14:52:55] Arguments: --nthreads 8
[2025-05-17 14:52:55] Threads: 8
[2025-05-17 14:52:55] Checking for CVMFS
[2025-05-17 14:52:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 14:52:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 14:52:56] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 14:52:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 14:52:58] 2.12.6.0 213643 6683 258016 146110 3 657 23494684 40960000 32375 16776704 0 77589520 99.771 49110402 24420 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-17 14:52:58] CVMFS is ok
[2025-05-17 14:52:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-17 14:52:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-17 14:52:58] Further information can be found at the LHC@home message board.
[2025-05-17 14:52:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 14:52:58] Checking for apptainer binary...
[2025-05-17 14:52:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 14:52:58] Running /usr/bin/apptainer --version
[2025-05-17 14:52:58] apptainer version 1.4.0-1.el9
[2025-05-17 14:52:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 14:52:59] c7-2-17.aglt2.org
[2025-05-17 14:52:59] apptainer works
[2025-05-17 14:52:59] Set ATHENA_PROC_NUMBER=8
[2025-05-17 14:52:59] Set ATHENA_CORE_NUMBER=8
[2025-05-17 14:52:59] Starting ATLAS job with PandaID=6656303071
[2025-05-17 14:52:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 18:10:55]  *** The last 200 lines of the pilot log: ***
[2025-05-17 18:10:55] 2025-05-17 22:10:39,813 | INFO     | sum of deviations: 77806259941.13368
[2025-05-17 18:10:55] 2025-05-17 22:10:39,813 | INFO     | mean x: 1747514107.0427806
[2025-05-17 18:10:55] 2025-05-17 22:10:39,813 | INFO     | mean y: 2215983.35828877
[2025-05-17 18:10:55] 2025-05-17 22:10:39,813 | INFO     | -- intersect: -67056570913.333466
[2025-05-17 18:10:55] 2025-05-17 22:10:39,813 | INFO     | intersect: -67056570913.333466
[2025-05-17 18:10:55] 2025-05-17 22:10:39,813 | INFO     | chi2: 3.0083260342205143
[2025-05-17 18:10:55] 2025-05-17 22:10:39,813 | INFO     | current chi2=3.0083260342205143 (change=51.05964605477514 %)
[2025-05-17 18:10:55] 2025-05-17 22:10:39,813 | INFO     | sum of square deviations: 1869246891.1483533
[2025-05-17 18:10:55] 2025-05-17 22:10:39,814 | INFO     | sum of deviations: 42718319892.13185
[2025-05-17 18:10:55] 2025-05-17 22:10:39,814 | INFO     | mean x: 1747514259.543956
[2025-05-17 18:10:55] 2025-05-17 22:10:39,814 | INFO     | mean y: 2249746.4835164836
[2025-05-17 18:10:55] 2025-05-17 22:10:39,814 | INFO     | -- intersect: -39934086918.70661
[2025-05-17 18:10:55] 2025-05-17 22:10:39,814 | INFO     | intersect: -39934086918.70661
[2025-05-17 18:10:55] 2025-05-17 22:10:39,814 | INFO     | chi2: 1.4512484896232662
[2025-05-17 18:10:55] 2025-05-17 22:10:39,814 | INFO     | current chi2=1.4512484896232662 (change=51.75893592931996 %)
[2025-05-17 18:10:55] 2025-05-17 22:10:39,814 | INFO     | sum of square deviations: 1719371873.6384225
[2025-05-17 18:10:55] 2025-05-17 22:10:39,815 | INFO     | sum of deviations: 11785857944.728811
[2025-05-17 18:10:55] 2025-05-17 22:10:39,815 | INFO     | mean x: 1747514412.0451977
[2025-05-17 18:10:55] 2025-05-17 22:10:39,815 | INFO     | mean y: 2281170.033898305
[2025-05-17 18:10:55] 2025-05-17 22:10:39,815 | INFO     | -- intersect: -11976486734.984331
[2025-05-17 18:10:55] 2025-05-17 22:10:39,815 | INFO     | intersect: -11976486734.984331
[2025-05-17 18:10:55] 2025-05-17 22:10:39,815 | INFO     | chi2: 0.17924594332778596
[2025-05-17 18:10:55] 2025-05-17 22:10:39,815 | INFO     | current chi2=0.17924594332778596 (change=87.64884548652884 %)
[2025-05-17 18:10:55] 2025-05-17 22:10:39,815 | INFO     | sum of square deviations: 1577740242.7151165
[2025-05-17 18:10:55] 2025-05-17 22:10:39,816 | INFO     | sum of deviations: 1933870671.715116
[2025-05-17 18:10:55] 2025-05-17 22:10:39,816 | INFO     | mean x: 1747514564.5406976
[2025-05-17 18:10:55] 2025-05-17 22:10:39,816 | INFO     | mean y: 2291777.5406976743
[2025-05-17 18:10:55] 2025-05-17 22:10:39,816 | INFO     | -- intersect: -2139674988.1320713
[2025-05-17 18:10:55] 2025-05-17 22:10:39,816 | INFO     | intersect: -2139674988.1320713
[2025-05-17 18:10:55] 2025-05-17 22:10:39,816 | INFO     | chi2: 0.04868841160371661
[2025-05-17 18:10:55] 2025-05-17 22:10:39,816 | INFO     | current chi2=0.04868841160371661 (change=72.8370914845864 %)
[2025-05-17 18:10:55] 2025-05-17 22:10:39,816 | INFO     | sum of square deviations: 1444098392.7065794
[2025-05-17 18:10:55] 2025-05-17 22:10:39,816 | INFO     | sum of deviations: -559318905.7185656
[2025-05-17 18:10:55] 2025-05-17 22:10:39,816 | INFO     | mean x: 1747514717.0419161
[2025-05-17 18:10:55] 2025-05-17 22:10:39,816 | INFO     | mean y: 2294564.245508982
[2025-05-17 18:10:55] 2025-05-17 22:10:39,817 | INFO     | -- intersect: 679130730.1185715
[2025-05-17 18:10:55] 2025-05-17 22:10:39,817 | INFO     | intersect: 679130730.1185715
[2025-05-17 18:10:55] 2025-05-17 22:10:39,817 | INFO     | chi2: 0.01864962197627174
[2025-05-17 18:10:55] 2025-05-17 22:10:39,817 | INFO     | current chi2=0.01864962197627174 (change=61.695973719446364 %)
[2025-05-17 18:10:55] 2025-05-17 22:10:39,817 | INFO     | sum of square deviations: 1318244746.3456802
[2025-05-17 18:10:55] 2025-05-17 22:10:39,817 | INFO     | sum of deviations: -254826099.96296287
[2025-05-17 18:10:55] 2025-05-17 22:10:39,817 | INFO     | mean x: 1747514869.5308642
[2025-05-17 18:10:55] 2025-05-17 22:10:39,817 | INFO     | mean y: 2294192.092592593
[2025-05-17 18:10:55] 2025-05-17 22:10:39,817 | INFO     | -- intersect: 340101264.7657749
[2025-05-17 18:10:55] 2025-05-17 22:10:39,817 | INFO     | intersect: 340101264.7657749
[2025-05-17 18:10:55] 2025-05-17 22:10:39,818 | INFO     | chi2: 0.01831851314822646
[2025-05-17 18:10:55] 2025-05-17 22:10:39,818 | INFO     | current chi2=0.01831851314822646 (change=1.7754184426180553 %)
[2025-05-17 18:10:55] 2025-05-17 22:10:39,818 | INFO     | left removable region: 60
[2025-05-17 18:10:55] 2025-05-17 22:10:39,818 | INFO     | sum of square deviations: 620248641.4920647
[2025-05-17 18:10:55] 2025-05-17 22:10:39,818 | INFO     | sum of deviations: 2271420212.36508
[2025-05-17 18:10:55] 2025-05-17 22:10:39,818 | INFO     | mean x: 1747515601.5079365
[2025-05-17 18:10:55] 2025-05-17 22:10:39,818 | INFO     | mean y: 2289007.134920635
[2025-05-17 18:10:55] 2025-05-17 22:10:39,818 | INFO     | -- intersect: -6397309465.406402
[2025-05-17 18:10:55] 2025-05-17 22:10:39,818 | INFO     | intersect: -6397309465.406402
[2025-05-17 18:10:55] 2025-05-17 22:10:39,818 | INFO     | chi2: 0.010046940143231339
[2025-05-17 18:10:55] 2025-05-17 22:10:39,818 | INFO     | -- intersect: -6397309465.406402
[2025-05-17 18:10:55] 2025-05-17 22:10:39,818 | INFO     | current memory leak: 3.66 B/s (using 126 data points, chi2=0.01)
[2025-05-17 18:10:55] 2025-05-17 22:10:39,819 | INFO     | ..............................
[2025-05-17 18:10:55] 2025-05-17 22:10:39,819 | INFO     | . Timing measurements:
[2025-05-17 18:10:55] 2025-05-17 22:10:39,819 | INFO     | . get job = 0 s
[2025-05-17 18:10:55] 2025-05-17 22:10:39,819 | INFO     | . initial setup = 6 s
[2025-05-17 18:10:55] 2025-05-17 22:10:39,819 | INFO     | . payload setup = 26 s
[2025-05-17 18:10:55] 2025-05-17 22:10:39,819 | INFO     | . stage-in = 0 s
[2025-05-17 18:10:55] 2025-05-17 22:10:39,819 | INFO     | . payload execution = 11714 s
[2025-05-17 18:10:55] 2025-05-17 22:10:39,819 | INFO     | . stage-out = 2 s
[2025-05-17 18:10:55] 2025-05-17 22:10:39,819 | INFO     | . log creation = 0 s
[2025-05-17 18:10:55] 2025-05-17 22:10:39,819 | INFO     | ..............................
[2025-05-17 18:10:55] 2025-05-17 22:10:39,861 | INFO     | 
[2025-05-17 18:10:55] 2025-05-17 22:10:39,861 | INFO     | job summary report
[2025-05-17 18:10:55] 2025-05-17 22:10:39,861 | INFO     | --------------------------------------------------
[2025-05-17 18:10:55] 2025-05-17 22:10:39,861 | INFO     | PanDA job id: 6656303071
[2025-05-17 18:10:55] 2025-05-17 22:10:39,861 | INFO     | task id: 44638099
[2025-05-17 18:10:55] 2025-05-17 22:10:39,861 | INFO     | errors: (none)
[2025-05-17 18:10:55] 2025-05-17 22:10:39,861 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 18:10:55] 2025-05-17 22:10:39,861 | INFO     | pilot state: finished 
[2025-05-17 18:10:55] 2025-05-17 22:10:39,861 | INFO     | transexitcode: 0
[2025-05-17 18:10:55] 2025-05-17 22:10:39,861 | INFO     | exeerrorcode: 0
[2025-05-17 18:10:55] 2025-05-17 22:10:39,861 | INFO     | exeerrordiag: 
[2025-05-17 18:10:55] 2025-05-17 22:10:39,862 | INFO     | exitcode: 0
[2025-05-17 18:10:55] 2025-05-17 22:10:39,862 | INFO     | exitmsg: OK
[2025-05-17 18:10:55] 2025-05-17 22:10:39,862 | INFO     | cpuconsumptiontime: 40914 s
[2025-05-17 18:10:55] 2025-05-17 22:10:39,862 | INFO     | nevents: 400
[2025-05-17 18:10:55] 2025-05-17 22:10:39,862 | INFO     | neventsw: 0
[2025-05-17 18:10:55] 2025-05-17 22:10:39,862 | INFO     | pid: 987063
[2025-05-17 18:10:55] 2025-05-17 22:10:39,862 | INFO     | pgrp: 987063
[2025-05-17 18:10:55] 2025-05-17 22:10:39,862 | INFO     | corecount: 8
[2025-05-17 18:10:55] 2025-05-17 22:10:39,862 | INFO     | event service: False
[2025-05-17 18:10:55] 2025-05-17 22:10:39,862 | INFO     | sizes: {0: 2393383, 1: 2393467, 2: 2393638, 13: 2393666, 24: 2393722, 25: 2393956, 35: 2394112, 11744: 2423249, 11747: 2432246, 11752: 2432360}
[2025-05-17 18:10:55] 2025-05-17 22:10:39,862 | INFO     | --------------------------------------------------
[2025-05-17 18:10:55] 2025-05-17 22:10:39,862 | INFO     | 
[2025-05-17 18:10:55] 2025-05-17 22:10:39,862 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-05-17 18:10:55] 2025-05-17 22:10:39,879 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 18:10:55] 2025-05-17 22:10:39,879 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 18:10:55] 2025-05-17 22:10:39,880 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 18:10:55] 2025-05-17 22:10:39,880 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 18:10:55] 2025-05-17 22:10:39,880 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 18:10:55] 2025-05-17 22:10:39,880 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 18:10:55] 2025-05-17 22:10:39,880 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 18:10:55] 2025-05-17 22:10:39,880 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 18:10:55] 2025-05-17 22:10:39,880 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 18:10:55] 2025-05-17 22:10:39,880 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 18:10:55] 2025-05-17 22:10:39,880 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 18:10:55] 2025-05-17 22:10:39,880 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 18:10:55] 2025-05-17 22:10:39,880 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 18:10:55] 2025-05-17 22:10:39,880 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 18:10:55] 2025-05-17 22:10:39,880 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 18:10:55] 2025-05-17 22:10:39,880 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 18:10:55] 2025-05-17 22:10:39,881 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 18:10:55] 2025-05-17 22:10:39,881 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 18:10:55] 2025-05-17 22:10:39,881 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 18:10:55] 2025-05-17 22:10:39,881 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 18:10:55] 2025-05-17 22:10:39,881 | INFO     | job 6656303071 has completed (purged errors)
[2025-05-17 18:10:55] 2025-05-17 22:10:39,881 | INFO     | overall cleanup function is called
[2025-05-17 18:10:55] 2025-05-17 22:10:40,890 | INFO     | --- collectZombieJob: --- 10, [987063]
[2025-05-17 18:10:55] 2025-05-17 22:10:40,890 | INFO     | zombie collector waiting for pid 987063
[2025-05-17 18:10:55] 2025-05-17 22:10:40,890 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 18:10:55] 2025-05-17 22:10:40,890 | INFO     | collected zombie processes
[2025-05-17 18:10:55] 2025-05-17 22:10:40,890 | INFO     | will attempt to kill all subprocesses of pid=987063
[2025-05-17 18:10:55] 2025-05-17 22:10:41,460 | INFO     | process IDs to be killed: [987063] (in reverse order)
[2025-05-17 18:10:55] 2025-05-17 22:10:41,567 | INFO     | 11810s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-05-17 18:10:55] 2025-05-17 22:10:41,649 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 18:10:55] 2025-05-17 22:10:41,649 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 18:10:55] 2025-05-17 22:10:41,673 | INFO     | did not find any defunct processes belonging to 987063
[2025-05-17 18:10:55] 2025-05-17 22:10:41,697 | INFO     | did not find any defunct processes belonging to 987063
[2025-05-17 18:10:55] 2025-05-17 22:10:41,697 | INFO     | ready for new job
[2025-05-17 18:10:55] 2025-05-17 22:10:41,698 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 18:10:55] 2025-05-17 22:10:41,700 | INFO     | **************************************
[2025-05-17 18:10:55] 2025-05-17 22:10:41,700 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 18:10:55] 2025-05-17 22:10:41,700 | INFO     | **************************************
[2025-05-17 18:10:55] 2025-05-17 22:10:41,700 | INFO     | 
[2025-05-17 18:10:55] 2025-05-17 22:10:41,717 | INFO     | architecture information:
[2025-05-17 18:10:55] 2025-05-17 22:10:41,718 | INFO     | executing command: cat /etc/os-release
[2025-05-17 18:10:55] 2025-05-17 22:10:41,734 | INFO     | cat /etc/os-release:
[2025-05-17 18:10:55] NAME="CentOS Linux"
[2025-05-17 18:10:55] VERSION="7 (Core)"
[2025-05-17 18:10:55] ID="centos"
[2025-05-17 18:10:55] ID_LIKE="rhel fedora"
[2025-05-17 18:10:55] VERSION_ID="7"
[2025-05-17 18:10:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 18:10:55] ANSI_COLOR="0;31"
[2025-05-17 18:10:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 18:10:55] HOME_URL="https://www.centos.org/"
[2025-05-17 18:10:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 18:10:55] 
[2025-05-17 18:10:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 18:10:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 18:10:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 18:10:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 18:10:55] 
[2025-05-17 18:10:55] 2025-05-17 22:10:41,734 | INFO     | **************************************
[2025-05-17 18:10:55] 2025-05-17 22:10:42,237 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-05-17 18:10:55] 2025-05-17 22:10:42,259 | INFO     | sufficient remaining disk space (129419444224 B)
[2025-05-17 18:10:55] 2025-05-17 22:10:42,259 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 18:10:55] 2025-05-17 22:10:42,259 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 18:10:55] 2025-05-17 22:10:42,259 | INFO     | update_server=False
[2025-05-17 18:10:55] 2025-05-17 22:10:42,259 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 18:10:55] 2025-05-17 22:10:42,547 | INFO     | all payload control threads have been joined
[2025-05-17 18:10:55] 2025-05-17 22:10:42,572 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 18:10:55] 2025-05-17 22:10:42,572 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 18:10:55] 2025-05-17 22:10:42,572 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 18:10:55] 2025-05-17 22:10:42,712 | INFO     | all data control threads have been joined
[2025-05-17 18:10:55] 2025-05-17 22:10:42,800 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 18:10:55] 2025-05-17 22:10:43,226 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 18:10:55] 2025-05-17 22:10:43,226 | INFO     | aborting loop
[2025-05-17 18:10:55] 2025-05-17 22:10:43,264 | INFO     | all job control threads have been joined
[2025-05-17 18:10:55] 2025-05-17 22:10:43,264 | INFO     | [job] retrieve thread has finished
[2025-05-17 18:10:55] 2025-05-17 22:10:43,552 | INFO     | [payload] control thread has finished
[2025-05-17 18:10:55] 2025-05-17 22:10:43,707 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 18:10:55] 2025-05-17 22:10:43,710 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 18:10:55] 2025-05-17 22:10:43,717 | INFO     | [data] control thread has finished
[2025-05-17 18:10:55] 2025-05-17 22:10:43,854 | INFO     | [data] copytool_in thread has finished
[2025-05-17 18:10:55] 2025-05-17 22:10:43,887 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 18:10:55] 2025-05-17 22:10:43,965 | INFO     | [job] validate thread has finished
[2025-05-17 18:10:55] 2025-05-17 22:10:44,232 | INFO     | [job] job monitor thread has finished
[2025-05-17 18:10:55] 2025-05-17 22:10:44,268 | INFO     | [job] control thread has finished
[2025-05-17 18:10:55] 2025-05-17 22:10:44,296 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 18:10:55] 2025-05-17 22:10:44,520 | INFO     | [payload] failed_post thread has finished
[2025-05-17 18:10:55] 2025-05-17 22:10:44,774 | INFO     | [payload] validate_post thread has finished
[2025-05-17 18:10:55] 2025-05-17 22:10:44,805 | INFO     | [data] copytool_out thread has finished
[2025-05-17 18:10:55] 2025-05-17 22:10:44,876 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 18:10:55] 2025-05-17 22:10:45,384 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 18:10:55] 2025-05-17 22:10:45,881 | INFO     | [job] queue monitor thread has finished
[2025-05-17 18:10:55] 2025-05-17 22:10:49,392 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 18:10:55] 2025-05-17 22:10:50,105 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139824809916224)>', '<ExcThread(monitor, started 139824329647872)>']
[2025-05-17 18:10:55] 2025-05-17 22:10:50,613 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 18:10:55] 2025-05-17 22:10:50,613 | INFO     | [monitor] control thread has ended
[2025-05-17 18:10:55] 2025-05-17 22:10:55,130 | INFO     | all workflow threads have been joined
[2025-05-17 18:10:55] 2025-05-17 22:10:55,130 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 18:10:55] 2025-05-17 22:10:55,130 | INFO     | traces error code: 0
[2025-05-17 18:10:55] 2025-05-17 22:10:55,131 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 18:10:55] 2025-05-17 22:10:55,280 [wrapper] ==== pilot stdout END ====
[2025-05-17 18:10:55] 2025-05-17 22:10:55,284 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 18:10:55] 2025-05-17 22:10:55,287 [wrapper] pilotpid: 955656
[2025-05-17 18:10:55] 2025-05-17 22:10:55,290 [wrapper] Pilot exit status: 0
[2025-05-17 18:10:55] 2025-05-17 22:10:55,303 [wrapper] pandaids: 6656303071
[2025-05-17 18:10:55] 2025-05-17 22:10:55,446 [wrapper] cleanup supervisor_pilot 3846439 955657
[2025-05-17 18:10:55] 2025-05-17 22:10:55,449 [wrapper] Test setup, not cleaning
[2025-05-17 18:10:55] 2025-05-17 22:10:55,451 [wrapper] apfmon messages muted
[2025-05-17 18:10:55] 2025-05-17 22:10:55,454 [wrapper] ==== wrapper stdout END ====
[2025-05-17 18:10:55] 2025-05-17 22:10:55,457 [wrapper] ==== wrapper stderr END ====
[2025-05-17 18:10:55]  *** Error codes and diagnostics ***
[2025-05-17 18:10:55]     "exeErrorCode": 0,
[2025-05-17 18:10:55]     "exeErrorDiag": "",
[2025-05-17 18:10:55]     "pilotErrorCode": 0,
[2025-05-17 18:10:55]     "pilotErrorDiag": "",
[2025-05-17 18:10:55]  *** Listing of results directory ***
[2025-05-17 18:10:55] total 422044
[2025-05-17 18:10:55] -rw-r--r--. 1 boincer umatlas    495897 May 17 14:44 pilot3.tar.gz
[2025-05-17 18:10:55] -rwx------. 1 boincer umatlas     37140 May 17 14:52 runpilot2-wrapper.sh
[2025-05-17 18:10:55] -rw-r--r--. 1 boincer umatlas      5111 May 17 14:52 queuedata.json
[2025-05-17 18:10:55] -rw-r--r--. 1 boincer umatlas       100 May 17 14:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 18:10:55] -rwxr-xr-x. 1 boincer umatlas      7986 May 17 14:52 run_atlas
[2025-05-17 18:10:55] -rw-r--r--. 1 boincer umatlas       105 May 17 14:52 job.xml
[2025-05-17 18:10:55] -rw-r--r--. 2 boincer umatlas 223086849 May 17 14:52 EVNT.44638096._002218.pool.root.1
[2025-05-17 18:10:55] drwxrwx--x. 2 boincer umatlas      4096 May 17 14:52 shared
[2025-05-17 18:10:55] -rw-r--r--. 2 boincer umatlas    508876 May 17 14:52 input.tar.gz
[2025-05-17 18:10:55] -rw-r--r--. 2 boincer umatlas     17569 May 17 14:52 start_atlas.sh
[2025-05-17 18:10:55] -rw-r--r--. 1 boincer umatlas         0 May 17 14:52 boinc_lockfile
[2025-05-17 18:10:55] -rw-r--r--. 1 boincer umatlas      2538 May 17 14:52 pandaJob.out
[2025-05-17 18:10:55] -rw-------. 1 boincer umatlas       467 May 17 14:53 setup.sh.local
[2025-05-17 18:10:55] -rw-------. 1 boincer umatlas    994635 May 17 14:53 agis_schedconf.cvmfs.json
[2025-05-17 18:10:55] drwx------. 4 boincer umatlas      4096 May 17 14:53 pilot3
[2025-05-17 18:10:55] -rw-r--r--. 1 boincer umatlas      6932 May 17 18:02 init_data.xml
[2025-05-17 18:10:55] -rw-------. 1 boincer umatlas 202599170 May 17 18:10 HITS.44638099._057268.pool.root.1
[2025-05-17 18:10:55] -rw-r--r--. 1 boincer umatlas       530 May 17 18:10 boinc_task_state.xml
[2025-05-17 18:10:55] -rw-------. 1 boincer umatlas        95 May 17 18:10 pilot_heartbeat.json
[2025-05-17 18:10:55] -rw-------. 1 boincer umatlas      1034 May 17 18:10 memory_monitor_summary.json
[2025-05-17 18:10:55] -rw-------. 1 boincer umatlas   1596741 May 17 18:10 agis_ddmendpoints.agis.ALL.json
[2025-05-17 18:10:55] -rw-------. 1 boincer umatlas    356987 May 17 18:10 log.44638099._057268.job.log.tgz.1
[2025-05-17 18:10:55] -rw-------. 1 boincer umatlas      7689 May 17 18:10 heartbeat.json
[2025-05-17 18:10:55] -rw-r--r--. 1 boincer umatlas      8192 May 17 18:10 boinc_mmap_file
[2025-05-17 18:10:55] -rw-r--r--. 1 boincer umatlas        28 May 17 18:10 wrapper_checkpoint.txt
[2025-05-17 18:10:55] -rw-------. 1 boincer umatlas      4354 May 17 18:10 pilotlog.txt
[2025-05-17 18:10:55] -rw-------. 1 boincer umatlas    962027 May 17 18:10 log.44638099._057268.job.log.1
[2025-05-17 18:10:55] -rw-------. 1 boincer umatlas       357 May 17 18:10 output.list
[2025-05-17 18:10:55] -rw-r--r--. 1 boincer umatlas       620 May 17 18:10 runtime_log
[2025-05-17 18:10:55] -rw-------. 1 boincer umatlas   1341440 May 17 18:10 result.tar.gz
[2025-05-17 18:10:55] -rw-r--r--. 1 boincer umatlas     11414 May 17 18:10 runtime_log.err
[2025-05-17 18:10:55] -rw-------. 1 boincer umatlas       656 May 17 18:10 imGNDm7oba7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhmOKDmIpDiqm.diag
[2025-05-17 18:10:55] -rw-r--r--. 1 boincer umatlas     20897 May 17 18:10 stderr.txt
[2025-05-17 18:10:55] HITS file was successfully produced:
[2025-05-17 18:10:55] -rw-------. 1 boincer umatlas 202599170 May 17 18:10 shared/HITS.pool.root.1
[2025-05-17 18:10:55]  *** Contents of shared directory: ***
[2025-05-17 18:10:55] total 417552
[2025-05-17 18:10:55] -rw-r--r--. 2 boincer umatlas 223086849 May 17 14:52 ATLAS.root_0
[2025-05-17 18:10:55] -rw-r--r--. 2 boincer umatlas    508876 May 17 14:52 input.tar.gz
[2025-05-17 18:10:55] -rw-r--r--. 2 boincer umatlas     17569 May 17 14:52 start_atlas.sh
[2025-05-17 18:10:55] -rw-------. 1 boincer umatlas 202599170 May 17 18:10 HITS.pool.root.1
[2025-05-17 18:10:55] -rw-------. 1 boincer umatlas   1341440 May 17 18:10 result.tar.gz
18:10:56 (942793): run_atlas exited; CPU time 41461.739664
18:10:56 (942793): called boinc_finish(0)

</stderr_txt>
]]>

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