Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:03:34 (16916): wrapper (7.7.26015): starting
14:03:34 (16916): wrapper: running run_atlas (--nthreads 8)
[2025-05-17 14:03:34] Arguments: --nthreads 8
[2025-05-17 14:03:34] Threads: 8
[2025-05-17 14:03:34] Checking for CVMFS
[2025-05-17 14:03:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 14:03:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 14:03:35] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 14:03:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 14:03:35] 2.11.2.0 2909 10110 76160 146108 0 55 19706044 20275201 1 130560 0 3217347 99.983 1878171 49049 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-05-17 14:03:35] CVMFS is ok
[2025-05-17 14:03:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-17 14:03:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-17 14:03:35] Further information can be found at the LHC@home message board.
[2025-05-17 14:03:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 14:03:35] Checking for apptainer binary...
[2025-05-17 14:03:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 14:03:35] Running /usr/bin/apptainer --version
[2025-05-17 14:03:35] apptainer version 1.3.2-1.el7
[2025-05-17 14:03:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 14:03:37] c-115-7.aglt2.org
[2025-05-17 14:03:37] apptainer works
[2025-05-17 14:03:37] Set ATHENA_PROC_NUMBER=8
[2025-05-17 14:03:37] Set ATHENA_CORE_NUMBER=8
[2025-05-17 14:03:37] Starting ATLAS job with PandaID=6653705567
[2025-05-17 14:03:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 16:32:24]  *** The last 200 lines of the pilot log: ***
[2025-05-17 16:32:24] 2025-05-17 20:32:04,554 | INFO     | -- intersect: -158721642415.42883
[2025-05-17 16:32:24] 2025-05-17 20:32:04,554 | INFO     | intersect: -158721642415.42883
[2025-05-17 16:32:24] 2025-05-17 20:32:04,555 | INFO     | chi2: 4.630365525893771
[2025-05-17 16:32:24] 2025-05-17 20:32:04,555 | INFO     | current chi2=4.630365525893771 (change=14.549393128093715 %)
[2025-05-17 16:32:24] 2025-05-17 20:32:04,555 | INFO     | right removable region: 140
[2025-05-17 16:32:24] 2025-05-17 20:32:04,555 | INFO     | sum of square deviations: 869188390.0
[2025-05-17 16:32:24] 2025-05-17 20:32:04,556 | INFO     | sum of deviations: 34401058458.0
[2025-05-17 16:32:24] 2025-05-17 20:32:04,556 | INFO     | mean x: 1747509638.0
[2025-05-17 16:32:24] 2025-05-17 20:32:04,557 | INFO     | mean y: 2514109.780141844
[2025-05-17 16:32:24] 2025-05-17 20:32:04,557 | INFO     | -- intersect: -69161066426.2604
[2025-05-17 16:32:24] 2025-05-17 20:32:04,557 | INFO     | intersect: -69161066426.2604
[2025-05-17 16:32:24] 2025-05-17 20:32:04,557 | INFO     | chi2: 2.8120181532208512
[2025-05-17 16:32:24] 2025-05-17 20:32:04,557 | INFO     | current chi2=2.8120181532208512 (change=48.10589868471399 %)
[2025-05-17 16:32:24] 2025-05-17 20:32:04,558 | INFO     | sum of square deviations: 779958810.0
[2025-05-17 16:32:24] 2025-05-17 20:32:04,558 | INFO     | sum of deviations: 7758010134.000002
[2025-05-17 16:32:24] 2025-05-17 20:32:04,558 | INFO     | mean x: 1747509790.5
[2025-05-17 16:32:24] 2025-05-17 20:32:04,559 | INFO     | mean y: 2559656.8529411764
[2025-05-17 16:32:24] 2025-05-17 20:32:04,559 | INFO     | -- intersect: -17379382171.54082
[2025-05-17 16:32:24] 2025-05-17 20:32:04,559 | INFO     | intersect: -17379382171.54082
[2025-05-17 16:32:24] 2025-05-17 20:32:04,559 | INFO     | chi2: 1.5848608820446004
[2025-05-17 16:32:24] 2025-05-17 20:32:04,559 | INFO     | current chi2=1.5848608820446004 (change=43.63973503409571 %)
[2025-05-17 16:32:24] 2025-05-17 20:32:04,560 | INFO     | sum of square deviations: 697054930.0
[2025-05-17 16:32:24] 2025-05-17 20:32:04,560 | INFO     | sum of deviations: -10465788056.0
[2025-05-17 16:32:24] 2025-05-17 20:32:04,560 | INFO     | mean x: 1747509943.0
[2025-05-17 16:32:24] 2025-05-17 20:32:04,561 | INFO     | sufficient remaining disk space (18300796928 B)
[2025-05-17 16:32:24] 2025-05-17 20:32:04,561 | INFO     | mean y: 2592914.099236641
[2025-05-17 16:32:24] 2025-05-17 20:32:04,561 | INFO     | -- intersect: 26240221976.11683
[2025-05-17 16:32:24] 2025-05-17 20:32:04,561 | INFO     | intersect: 26240221976.11683
[2025-05-17 16:32:24] 2025-05-17 20:32:04,562 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-05-17 16:32:24] 2025-05-17 20:32:04,562 | INFO     | chi2: 0.8830027072794564
[2025-05-17 16:32:24] 2025-05-17 20:32:04,562 | INFO     | current chi2=0.8830027072794564 (change=44.285159834324986 %)
[2025-05-17 16:32:24] 2025-05-17 20:32:04,562 | INFO     | sum of square deviations: 620244187.5
[2025-05-17 16:32:24] 2025-05-17 20:32:04,563 | INFO     | sum of deviations: -15207583162.0
[2025-05-17 16:32:24] 2025-05-17 20:32:04,563 | INFO     | mean x: 1747510095.5
[2025-05-17 16:32:24] 2025-05-17 20:32:04,563 | INFO     | mean y: 2602208.9682539683
[2025-05-17 16:32:24] 2025-05-17 20:32:04,563 | INFO     | -- intersect: 42849283627.89056
[2025-05-17 16:32:24] 2025-05-17 20:32:04,564 | INFO     | intersect: 42849283627.89056
[2025-05-17 16:32:24] 2025-05-17 20:32:04,564 | INFO     | chi2: 0.8065610070880146
[2025-05-17 16:32:24] 2025-05-17 20:32:04,564 | INFO     | current chi2=0.8065610070880146 (change=8.657017646860874 %)
[2025-05-17 16:32:24] 2025-05-17 20:32:04,564 | INFO     | left removable region: 40
[2025-05-17 16:32:24] 2025-05-17 20:32:04,564 | INFO     | sum of square deviations: 310052325.0
[2025-05-17 16:32:24] 2025-05-17 20:32:04,565 | INFO     | sum of deviations: -5053574340.999999
[2025-05-17 16:32:24] 2025-05-17 20:32:04,565 | INFO     | mean x: 1747510522.5
[2025-05-17 16:32:24] 2025-05-17 20:32:04,565 | INFO     | mean y: 2618384.22
[2025-05-17 16:32:24] 2025-05-17 20:32:04,565 | INFO     | -- intersect: 28485469906.56708
[2025-05-17 16:32:24] 2025-05-17 20:32:04,565 | INFO     | intersect: 28485469906.56708
[2025-05-17 16:32:24] 2025-05-17 20:32:04,566 | INFO     | chi2: 0.007897348332936314
[2025-05-17 16:32:24] 2025-05-17 20:32:04,566 | INFO     | -- intersect: 28485469906.56708
[2025-05-17 16:32:24] 2025-05-17 20:32:04,566 | INFO     | current memory leak: -16.30 B/s (using 100 data points, chi2=0.01)
[2025-05-17 16:32:24] 2025-05-17 20:32:04,567 | INFO     | ..............................
[2025-05-17 16:32:24] 2025-05-17 20:32:04,567 | INFO     | . Timing measurements:
[2025-05-17 16:32:24] 2025-05-17 20:32:04,567 | INFO     | . get job = 0 s
[2025-05-17 16:32:24] 2025-05-17 20:32:04,567 | INFO     | . initial setup = 2 s
[2025-05-17 16:32:24] 2025-05-17 20:32:04,567 | INFO     | . payload setup = 8 s
[2025-05-17 16:32:24] 2025-05-17 20:32:04,568 | INFO     | . stage-in = 0 s
[2025-05-17 16:32:24] 2025-05-17 20:32:04,568 | INFO     | . payload execution = 8855 s
[2025-05-17 16:32:24] 2025-05-17 20:32:04,568 | INFO     | . stage-out = 0 s
[2025-05-17 16:32:24] 2025-05-17 20:32:04,568 | INFO     | . log creation = 0 s
[2025-05-17 16:32:24] 2025-05-17 20:32:04,568 | INFO     | ..............................
[2025-05-17 16:32:24] 2025-05-17 20:32:04,656 | INFO     | 
[2025-05-17 16:32:24] 2025-05-17 20:32:04,656 | INFO     | job summary report
[2025-05-17 16:32:24] 2025-05-17 20:32:04,656 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6653705567: 3837175 B (within 2537553920 B limit)
[2025-05-17 16:32:24] 2025-05-17 20:32:04,656 | INFO     | --------------------------------------------------
[2025-05-17 16:32:24] 2025-05-17 20:32:04,657 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6653705567/HITS.44669162._000057.pool.root.1 does not exist (skip from workdir size calculation)
[2025-05-17 16:32:24] 2025-05-17 20:32:04,657 | INFO     | PanDA job id: 6653705567
[2025-05-17 16:32:24] 2025-05-17 20:32:04,657 | INFO     | total size of present files: 0 B (workdir size: 3837175 B)
[2025-05-17 16:32:24] 2025-05-17 20:32:04,657 | INFO     | task id: 44669162
[2025-05-17 16:32:24] 2025-05-17 20:32:04,658 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6653705567/HITS.44669162._000057.pool.root.1 since it does not exist
[2025-05-17 16:32:24] 2025-05-17 20:32:04,658 | INFO     | errors: (none)
[2025-05-17 16:32:24] 2025-05-17 20:32:04,659 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 16:32:24] 2025-05-17 20:32:04,659 | INFO     | pilot state: finished 
[2025-05-17 16:32:24] 2025-05-17 20:32:04,659 | INFO     | transexitcode: 0
[2025-05-17 16:32:24] 2025-05-17 20:32:04,659 | INFO     | exeerrorcode: 0
[2025-05-17 16:32:24] 2025-05-17 20:32:04,659 | INFO     | exeerrordiag: 
[2025-05-17 16:32:24] 2025-05-17 20:32:04,659 | INFO     | exitcode: 0
[2025-05-17 16:32:24] 2025-05-17 20:32:04,659 | INFO     | exitmsg: OK
[2025-05-17 16:32:24] 2025-05-17 20:32:04,659 | INFO     | cpuconsumptiontime: 61088 s
[2025-05-17 16:32:24] 2025-05-17 20:32:04,660 | INFO     | nevents: 400
[2025-05-17 16:32:24] 2025-05-17 20:32:04,660 | INFO     | neventsw: 0
[2025-05-17 16:32:24] 2025-05-17 20:32:04,660 | INFO     | pid: 26984
[2025-05-17 16:32:24] 2025-05-17 20:32:04,660 | INFO     | pgrp: 26984
[2025-05-17 16:32:24] 2025-05-17 20:32:04,660 | INFO     | corecount: 8
[2025-05-17 16:32:24] 2025-05-17 20:32:04,660 | INFO     | event service: False
[2025-05-17 16:32:24] 2025-05-17 20:32:04,660 | INFO     | sizes: {0: 2393561, 1: 2393760, 6: 2393966, 12: 2393994, 8867: 2421974, 8868: 2421973, 8869: 2431098, 8870: 2431154, 8876: 2431324}
[2025-05-17 16:32:24] 2025-05-17 20:32:04,661 | INFO     | --------------------------------------------------
[2025-05-17 16:32:24] 2025-05-17 20:32:04,661 | INFO     | 
[2025-05-17 16:32:24] 2025-05-17 20:32:04,661 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-17 16:32:24] 2025-05-17 20:32:04,689 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 16:32:24] 2025-05-17 20:32:04,690 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 16:32:24] 2025-05-17 20:32:04,690 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 16:32:24] 2025-05-17 20:32:04,690 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 16:32:24] 2025-05-17 20:32:04,691 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 16:32:24] 2025-05-17 20:32:04,691 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 16:32:24] 2025-05-17 20:32:04,691 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 16:32:24] 2025-05-17 20:32:04,691 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 16:32:24] 2025-05-17 20:32:04,691 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 16:32:24] 2025-05-17 20:32:04,691 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 16:32:24] 2025-05-17 20:32:04,692 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 16:32:24] 2025-05-17 20:32:04,692 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 16:32:24] 2025-05-17 20:32:04,692 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 16:32:24] 2025-05-17 20:32:04,692 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 16:32:24] 2025-05-17 20:32:04,692 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 16:32:24] 2025-05-17 20:32:04,693 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 16:32:24] 2025-05-17 20:32:04,693 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 16:32:24] 2025-05-17 20:32:04,693 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 16:32:24] 2025-05-17 20:32:04,693 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 16:32:24] 2025-05-17 20:32:04,693 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 16:32:24] 2025-05-17 20:32:04,694 | INFO     | job 6653705567 has completed (purged errors)
[2025-05-17 16:32:24] 2025-05-17 20:32:04,694 | INFO     | overall cleanup function is called
[2025-05-17 16:32:24] 2025-05-17 20:32:04,758 | INFO     | number of running child processes to parent process 26984: 1
[2025-05-17 16:32:24] 2025-05-17 20:32:04,758 | INFO     | maximum number of monitored processes: 6
[2025-05-17 16:32:24] 2025-05-17 20:32:04,758 | INFO     | aborting job monitoring since job object (job id=6653705567) has expired
[2025-05-17 16:32:24] 2025-05-17 20:32:05,703 | INFO     | --- collectZombieJob: --- 10, [26984]
[2025-05-17 16:32:24] 2025-05-17 20:32:05,703 | INFO     | zombie collector waiting for pid 26984
[2025-05-17 16:32:24] 2025-05-17 20:32:05,703 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 16:32:24] 2025-05-17 20:32:05,704 | INFO     | collected zombie processes
[2025-05-17 16:32:24] 2025-05-17 20:32:05,704 | INFO     | will attempt to kill all subprocesses of pid=26984
[2025-05-17 16:32:24] 2025-05-17 20:32:05,782 | INFO     | process IDs to be killed: [26984] (in reverse order)
[2025-05-17 16:32:24] 2025-05-17 20:32:05,835 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 16:32:24] 2025-05-17 20:32:05,836 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 16:32:24] 2025-05-17 20:32:05,839 | INFO     | did not find any defunct processes belonging to 26984
[2025-05-17 16:32:24] 2025-05-17 20:32:05,841 | INFO     | did not find any defunct processes belonging to 26984
[2025-05-17 16:32:24] 2025-05-17 20:32:05,842 | INFO     | ready for new job
[2025-05-17 16:32:24] 2025-05-17 20:32:05,842 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 16:32:24] 2025-05-17 20:32:05,843 | INFO     | **************************************
[2025-05-17 16:32:24] 2025-05-17 20:32:05,843 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 16:32:24] 2025-05-17 20:32:05,843 | INFO     | **************************************
[2025-05-17 16:32:24] 2025-05-17 20:32:05,843 | INFO     | 
[2025-05-17 16:32:24] 2025-05-17 20:32:05,844 | INFO     | architecture information:
[2025-05-17 16:32:24] 2025-05-17 20:32:05,844 | INFO     | executing command: cat /etc/os-release
[2025-05-17 16:32:24] 2025-05-17 20:32:05,864 | INFO     | cat /etc/os-release:
[2025-05-17 16:32:24] NAME="CentOS Linux"
[2025-05-17 16:32:24] VERSION="7 (Core)"
[2025-05-17 16:32:24] ID="centos"
[2025-05-17 16:32:24] ID_LIKE="rhel fedora"
[2025-05-17 16:32:24] VERSION_ID="7"
[2025-05-17 16:32:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 16:32:24] ANSI_COLOR="0;31"
[2025-05-17 16:32:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 16:32:24] HOME_URL="https://www.centos.org/"
[2025-05-17 16:32:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 16:32:24] 
[2025-05-17 16:32:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 16:32:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 16:32:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 16:32:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 16:32:24] 
[2025-05-17 16:32:24] 2025-05-17 20:32:05,864 | INFO     | **************************************
[2025-05-17 16:32:24] 2025-05-17 20:32:06,367 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-17 16:32:24] 2025-05-17 20:32:06,388 | INFO     | sufficient remaining disk space (18304991232 B)
[2025-05-17 16:32:24] 2025-05-17 20:32:06,388 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 16:32:24] 2025-05-17 20:32:06,389 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 16:32:24] 2025-05-17 20:32:06,389 | INFO     | update_server=False
[2025-05-17 16:32:24] 2025-05-17 20:32:06,389 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 16:32:24] 2025-05-17 20:32:06,390 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 16:32:24] 2025-05-17 20:32:06,390 | INFO     | aborting loop
[2025-05-17 16:32:24] 2025-05-17 20:32:06,390 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 16:32:24] 2025-05-17 20:32:06,391 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-17 16:32:24] 2025-05-17 20:32:06,391 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 16:32:24] 2025-05-17 20:32:06,391 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 16:32:24] 2025-05-17 20:32:06,392 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 16:32:24] 2025-05-17 20:32:06,392 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 16:32:24] 2025-05-17 20:32:06,555 | INFO     | all data control threads have been joined
[2025-05-17 16:32:24] 2025-05-17 20:32:06,997 | INFO     | all payload control threads have been joined
[2025-05-17 16:32:24] 2025-05-17 20:32:07,395 | INFO     | [job] retrieve thread has finished
[2025-05-17 16:32:24] 2025-05-17 20:32:07,395 | INFO     | [job] job monitor thread has finished
[2025-05-17 16:32:24] 2025-05-17 20:32:07,397 | INFO     | [job] queue monitor thread has finished
[2025-05-17 16:32:24] 2025-05-17 20:32:07,485 | INFO     | [payload] validate_post thread has finished
[2025-05-17 16:32:24] 2025-05-17 20:32:07,561 | INFO     | [data] control thread has finished
[2025-05-17 16:32:24] 2025-05-17 20:32:07,607 | INFO     | all job control threads have been joined
[2025-05-17 16:32:24] 2025-05-17 20:32:07,763 | INFO     | [payload] failed_post thread has finished
[2025-05-17 16:32:24] 2025-05-17 20:32:07,781 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 16:32:24] 2025-05-17 20:32:08,003 | INFO     | [payload] control thread has finished
[2025-05-17 16:32:24] 2025-05-17 20:32:08,196 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 16:32:24] 2025-05-17 20:32:08,238 | INFO     | [data] copytool_in thread has finished
[2025-05-17 16:32:24] 2025-05-17 20:32:08,396 | INFO     | [data] copytool_out thread has finished
[2025-05-17 16:32:24] 2025-05-17 20:32:08,613 | INFO     | [job] control thread has finished
[2025-05-17 16:32:24] 2025-05-17 20:32:08,679 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 16:32:24] 2025-05-17 20:32:08,680 | INFO     | [job] validate thread has finished
[2025-05-17 16:32:24] 2025-05-17 20:32:09,200 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 16:32:24] 2025-05-17 20:32:13,206 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 16:32:24] 2025-05-17 20:32:17,054 | INFO     | job.realtimelogging is not enabled
[2025-05-17 16:32:24] 2025-05-17 20:32:18,059 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 16:32:24] 2025-05-17 20:32:19,525 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140577414022976)>', '<ExcThread(monitor, started 140577114920704)>']
[2025-05-17 16:32:24] 2025-05-17 20:32:20,461 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 16:32:24] 2025-05-17 20:32:20,462 | INFO     | [monitor] control thread has ended
[2025-05-17 16:32:24] 2025-05-17 20:32:24,552 | INFO     | all workflow threads have been joined
[2025-05-17 16:32:24] 2025-05-17 20:32:24,556 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 16:32:24] 2025-05-17 20:32:24,556 | INFO     | traces error code: 0
[2025-05-17 16:32:24] 2025-05-17 20:32:24,557 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 16:32:24] 2025-05-17 20:32:24,667 [wrapper] ==== pilot stdout END ====
[2025-05-17 16:32:24] 2025-05-17 20:32:24,671 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 16:32:24] 2025-05-17 20:32:24,676 [wrapper] pilotpid: 20508
[2025-05-17 16:32:24] 2025-05-17 20:32:24,681 [wrapper] Pilot exit status: 0
[2025-05-17 16:32:24] 2025-05-17 20:32:24,701 [wrapper] pandaids: 6653705567
[2025-05-17 16:32:24] 2025-05-17 20:32:24,742 [wrapper] cleanup supervisor_pilot 11140 20509
[2025-05-17 16:32:24] 2025-05-17 20:32:24,747 [wrapper] Test setup, not cleaning
[2025-05-17 16:32:24] 2025-05-17 20:32:24,752 [wrapper] apfmon messages muted
[2025-05-17 16:32:24] 2025-05-17 20:32:24,757 [wrapper] ==== wrapper stdout END ====
[2025-05-17 16:32:24] 2025-05-17 20:32:24,762 [wrapper] ==== wrapper stderr END ====
[2025-05-17 16:32:24]  *** Error codes and diagnostics ***
[2025-05-17 16:32:24]     "exeErrorCode": 0,
[2025-05-17 16:32:24]     "exeErrorDiag": "",
[2025-05-17 16:32:24]     "pilotErrorCode": 0,
[2025-05-17 16:32:24]     "pilotErrorDiag": "",
[2025-05-17 16:32:24]  *** Listing of results directory ***
[2025-05-17 16:32:24] total 587284
[2025-05-17 16:32:24] -rwx------ 1 boincer umatlas     37140 May 17 10:09 runpilot2-wrapper.sh
[2025-05-17 16:32:24] -rw-r--r-- 1 boincer umatlas      5111 May 17 10:09 queuedata.json
[2025-05-17 16:32:24] -rw-r--r-- 1 boincer umatlas    495897 May 17 10:09 pilot3.tar.gz
[2025-05-17 16:32:24] -rw-r--r-- 1 boincer umatlas       100 May 17 14:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 16:32:24] -rwxr-xr-x 1 boincer umatlas      7986 May 17 14:03 run_atlas
[2025-05-17 16:32:24] -rw-r--r-- 1 boincer umatlas       105 May 17 14:03 job.xml
[2025-05-17 16:32:24] -rw-r--r-- 2 boincer umatlas 356752628 May 17 14:03 EVNT.44669160._000003.pool.root.1
[2025-05-17 16:32:24] -rw-r--r-- 2 boincer umatlas     17569 May 17 14:03 start_atlas.sh
[2025-05-17 16:32:24] drwxrwx--x 2 boincer umatlas      4096 May 17 14:03 shared
[2025-05-17 16:32:24] -rw-r--r-- 2 boincer umatlas    508874 May 17 14:03 input.tar.gz
[2025-05-17 16:32:24] -rw-r--r-- 1 boincer umatlas         0 May 17 14:03 boinc_lockfile
[2025-05-17 16:32:24] -rw-r--r-- 1 boincer umatlas      2592 May 17 14:03 pandaJob.out
[2025-05-17 16:32:24] -rw------- 1 boincer umatlas       424 May 17 14:03 setup.sh.local
[2025-05-17 16:32:24] -rw------- 1 boincer umatlas    994635 May 17 14:03 agis_schedconf.cvmfs.json
[2025-05-17 16:32:24] -rw------- 1 boincer umatlas   1596741 May 17 14:03 agis_ddmendpoints.agis.ALL.json
[2025-05-17 16:32:24] drwx------ 4 boincer umatlas      4096 May 17 14:03 pilot3
[2025-05-17 16:32:24] -rw-r--r-- 1 boincer umatlas      5823 May 17 16:29 init_data.xml
[2025-05-17 16:32:24] -rw------- 1 boincer umatlas 238366625 May 17 16:31 HITS.44669162._000057.pool.root.1
[2025-05-17 16:32:24] -rw-r--r-- 1 boincer umatlas       529 May 17 16:31 boinc_task_state.xml
[2025-05-17 16:32:24] -rw------- 1 boincer umatlas        95 May 17 16:31 pilot_heartbeat.json
[2025-05-17 16:32:24] -rw------- 1 boincer umatlas      1051 May 17 16:31 memory_monitor_summary.json
[2025-05-17 16:32:24] -rw------- 1 boincer umatlas    403534 May 17 16:31 log.44669162._000057.job.log.tgz.1
[2025-05-17 16:32:24] -rw------- 1 boincer umatlas      7738 May 17 16:32 heartbeat.json
[2025-05-17 16:32:24] -rw-r--r-- 1 boincer umatlas        27 May 17 16:32 wrapper_checkpoint.txt
[2025-05-17 16:32:24] -rw-r--r-- 1 boincer umatlas      8192 May 17 16:32 boinc_mmap_file
[2025-05-17 16:32:24] -rw------- 1 boincer umatlas      4548 May 17 16:32 pilotlog.txt
[2025-05-17 16:32:24] -rw------- 1 boincer umatlas    810957 May 17 16:32 log.44669162._000057.job.log.1
[2025-05-17 16:32:24] -rw------- 1 boincer umatlas       357 May 17 16:32 output.list
[2025-05-17 16:32:24] -rw-r--r-- 1 boincer umatlas       620 May 17 16:32 runtime_log
[2025-05-17 16:32:24] -rw------- 1 boincer umatlas   1228800 May 17 16:32 result.tar.gz
[2025-05-17 16:32:24] -rw------- 1 boincer umatlas       660 May 17 16:32 UweKDmcPXa7n9Rq4apOajLDm4fhM0noT9bVof3QYDm8hKKDmLmd3on.diag
[2025-05-17 16:32:24] -rw-r--r-- 1 boincer umatlas     11008 May 17 16:32 runtime_log.err
[2025-05-17 16:32:24] -rw-r--r-- 1 boincer umatlas     21223 May 17 16:32 stderr.txt
[2025-05-17 16:32:24] HITS file was successfully produced:
[2025-05-17 16:32:24] -rw------- 1 boincer umatlas 238366625 May 17 16:31 shared/HITS.pool.root.1
[2025-05-17 16:32:24]  *** Contents of shared directory: ***
[2025-05-17 16:32:24] total 582896
[2025-05-17 16:32:24] -rw-r--r-- 2 boincer umatlas 356752628 May 17 14:03 ATLAS.root_0
[2025-05-17 16:32:24] -rw-r--r-- 2 boincer umatlas     17569 May 17 14:03 start_atlas.sh
[2025-05-17 16:32:24] -rw-r--r-- 2 boincer umatlas    508874 May 17 14:03 input.tar.gz
[2025-05-17 16:32:24] -rw------- 1 boincer umatlas 238366625 May 17 16:31 HITS.pool.root.1
[2025-05-17 16:32:24] -rw------- 1 boincer umatlas   1228800 May 17 16:32 result.tar.gz
16:32:26 (16916): run_atlas exited; CPU time 61113.878904
16:32:26 (16916): called boinc_finish(0)

</stderr_txt>
]]>

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