Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:48:30 (1085581): wrapper (7.7.26015): starting
13:48:30 (1085581): wrapper: running run_atlas (--nthreads 8)
[2025-05-17 13:48:30] Arguments: --nthreads 8
[2025-05-17 13:48:30] Threads: 8
[2025-05-17 13:48:30] Checking for CVMFS
[2025-05-17 13:48:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 13:48:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 13:48:30] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 13:48:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 13:48:30] 2.12.6.0 8763 7187 319492 146108 0 712 31368892 32935937 45512 16776704 0 101688335 99.606 101892545 36831 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-17 13:48:30] CVMFS is ok
[2025-05-17 13:48:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-17 13:48:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-17 13:48:30] Further information can be found at the LHC@home message board.
[2025-05-17 13:48:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 13:48:30] Checking for apptainer binary...
[2025-05-17 13:48:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 13:48:30] Running /usr/bin/apptainer --version
[2025-05-17 13:48:30] apptainer version 1.4.0-1.el9
[2025-05-17 13:48:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 13:48:30] c7-9-14.aglt2.org
[2025-05-17 13:48:30] apptainer works
[2025-05-17 13:48:30] Set ATHENA_PROC_NUMBER=8
[2025-05-17 13:48:30] Set ATHENA_CORE_NUMBER=8
[2025-05-17 13:48:30] Starting ATLAS job with PandaID=6656126861
[2025-05-17 13:48:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 15:51:37]  *** The last 200 lines of the pilot log: ***
[2025-05-17 15:51:37] 2025-05-17 19:50:52,645 | INFO     | mean x: 1747507789.5
[2025-05-17 15:51:37] 2025-05-17 19:50:52,645 | INFO     | mean y: 1988847.1416666666
[2025-05-17 15:51:37] 2025-05-17 19:50:52,645 | INFO     | -- intersect: -183616974177.83783
[2025-05-17 15:51:37] 2025-05-17 19:50:52,645 | INFO     | intersect: -183616974177.83783
[2025-05-17 15:51:37] 2025-05-17 19:50:52,645 | INFO     | chi2: 4.509656727666515
[2025-05-17 15:51:37] 2025-05-17 19:50:52,645 | INFO     | sum of square deviations: 471562330.0
[2025-05-17 15:51:37] 2025-05-17 19:50:52,646 | INFO     | sum of deviations: 53915554672.0
[2025-05-17 15:51:37] 2025-05-17 19:50:52,646 | INFO     | mean x: 1747507637.0
[2025-05-17 15:51:37] 2025-05-17 19:50:52,646 | INFO     | mean y: 1983123.0
[2025-05-17 15:51:37] 2025-05-17 19:50:52,646 | INFO     | -- intersect: -199797359505.6002
[2025-05-17 15:51:37] 2025-05-17 19:50:52,646 | INFO     | intersect: -199797359505.6002
[2025-05-17 15:51:37] 2025-05-17 19:50:52,646 | INFO     | chi2: 4.46522101198415
[2025-05-17 15:51:37] 2025-05-17 19:50:52,646 | INFO     | current chi2=4.46522101198415 (change=0.9853458559218946 %)
[2025-05-17 15:51:37] 2025-05-17 19:50:52,646 | INFO     | right removable region: 114
[2025-05-17 15:51:37] 2025-05-17 19:50:52,646 | INFO     | sum of square deviations: 471562330.0
[2025-05-17 15:51:37] 2025-05-17 19:50:52,646 | INFO     | sum of deviations: 31469702787.0
[2025-05-17 15:51:37] 2025-05-17 19:50:52,646 | INFO     | mean x: 1747507942.0
[2025-05-17 15:51:37] 2025-05-17 19:50:52,646 | INFO     | mean y: 2047583.756521739
[2025-05-17 15:51:37] 2025-05-17 19:50:52,646 | INFO     | -- intersect: -116617860441.25903
[2025-05-17 15:51:37] 2025-05-17 19:50:52,646 | INFO     | intersect: -116617860441.25903
[2025-05-17 15:51:37] 2025-05-17 19:50:52,647 | INFO     | chi2: 1.979724908439543
[2025-05-17 15:51:37] 2025-05-17 19:50:52,647 | INFO     | current chi2=1.979724908439543 (change=56.10031920403096 %)
[2025-05-17 15:51:37] 2025-05-17 19:50:52,647 | INFO     | sum of square deviations: 412686807.5
[2025-05-17 15:51:37] 2025-05-17 19:50:52,647 | INFO     | sum of deviations: 12407555977.0
[2025-05-17 15:51:37] 2025-05-17 19:50:52,647 | INFO     | mean x: 1747508094.5
[2025-05-17 15:51:37] 2025-05-17 19:50:52,647 | INFO     | mean y: 2096993.9090909092
[2025-05-17 15:51:37] 2025-05-17 19:50:52,647 | INFO     | -- intersect: -52537272108.09293
[2025-05-17 15:51:37] 2025-05-17 19:50:52,647 | INFO     | intersect: -52537272108.09293
[2025-05-17 15:51:37] 2025-05-17 19:50:52,647 | INFO     | chi2: 0.6009422648662458
[2025-05-17 15:51:37] 2025-05-17 19:50:52,647 | INFO     | current chi2=0.6009422648662458 (change=69.64516320906827 %)
[2025-05-17 15:51:37] 2025-05-17 19:50:52,647 | INFO     | sum of square deviations: 358927660.0
[2025-05-17 15:51:37] 2025-05-17 19:50:52,648 | INFO     | sum of deviations: 2113255574.0000007
[2025-05-17 15:51:37] 2025-05-17 19:50:52,648 | INFO     | mean x: 1747508247.0
[2025-05-17 15:51:37] 2025-05-17 19:50:52,648 | INFO     | mean y: 2125767.685714286
[2025-05-17 15:51:37] 2025-05-17 19:50:52,648 | INFO     | -- intersect: -10286664858.212885
[2025-05-17 15:51:37] 2025-05-17 19:50:52,648 | INFO     | intersect: -10286664858.212885
[2025-05-17 15:51:37] 2025-05-17 19:50:52,648 | INFO     | chi2: 0.037578751291895265
[2025-05-17 15:51:37] 2025-05-17 19:50:52,648 | INFO     | current chi2=0.037578751291895265 (change=93.74669523364956 %)
[2025-05-17 15:51:37] 2025-05-17 19:50:52,648 | INFO     | sum of square deviations: 310052325.0
[2025-05-17 15:51:37] 2025-05-17 19:50:52,648 | INFO     | sum of deviations: 1272001158.0000002
[2025-05-17 15:51:37] 2025-05-17 19:50:52,648 | INFO     | mean x: 1747508399.5
[2025-05-17 15:51:37] 2025-05-17 19:50:52,648 | INFO     | mean y: 2128399.28
[2025-05-17 15:51:37] 2025-05-17 19:50:52,648 | INFO     | -- intersect: -7167089595.710771
[2025-05-17 15:51:37] 2025-05-17 19:50:52,648 | INFO     | intersect: -7167089595.710771
[2025-05-17 15:51:37] 2025-05-17 19:50:52,648 | INFO     | chi2: 0.035787117240068125
[2025-05-17 15:51:37] 2025-05-17 19:50:52,648 | INFO     | current chi2=0.035787117240068125 (change=4.767678515740218 %)
[2025-05-17 15:51:37] 2025-05-17 19:50:52,648 | INFO     | left removable region: 40
[2025-05-17 15:51:37] 2025-05-17 19:50:52,648 | INFO     | sum of square deviations: 125630262.5
[2025-05-17 15:51:37] 2025-05-17 19:50:52,649 | INFO     | sum of deviations: 412371803.5
[2025-05-17 15:51:37] 2025-05-17 19:50:52,649 | INFO     | mean x: 1747508826.5
[2025-05-17 15:51:37] 2025-05-17 19:50:52,649 | INFO     | mean y: 2131607.310810811
[2025-05-17 15:51:37] 2025-05-17 19:50:52,649 | INFO     | -- intersect: -5733933510.088538
[2025-05-17 15:51:37] 2025-05-17 19:50:52,649 | INFO     | intersect: -5733933510.088538
[2025-05-17 15:51:37] 2025-05-17 19:50:52,649 | INFO     | chi2: 0.01761071502110221
[2025-05-17 15:51:37] 2025-05-17 19:50:52,649 | INFO     | -- intersect: -5733933510.088538
[2025-05-17 15:51:37] 2025-05-17 19:50:52,649 | INFO     | current memory leak: 3.28 B/s (using 74 data points, chi2=0.02)
[2025-05-17 15:51:37] 2025-05-17 19:50:52,649 | INFO     | ..............................
[2025-05-17 15:51:37] 2025-05-17 19:50:52,649 | INFO     | . Timing measurements:
[2025-05-17 15:51:37] 2025-05-17 19:50:52,649 | INFO     | . get job = 0 s
[2025-05-17 15:51:37] 2025-05-17 19:50:52,649 | INFO     | . initial setup = 2 s
[2025-05-17 15:51:37] 2025-05-17 19:50:52,649 | INFO     | . payload setup = 8 s
[2025-05-17 15:51:37] 2025-05-17 19:50:52,649 | INFO     | . stage-in = 0 s
[2025-05-17 15:51:37] 2025-05-17 19:50:52,649 | INFO     | . payload execution = 7287 s
[2025-05-17 15:51:37] 2025-05-17 19:50:52,649 | INFO     | . stage-out = 0 s
[2025-05-17 15:51:37] 2025-05-17 19:50:52,649 | INFO     | . log creation = 0 s
[2025-05-17 15:51:37] 2025-05-17 19:50:52,649 | INFO     | ..............................
[2025-05-17 15:51:37] 2025-05-17 19:50:52,700 | INFO     | 
[2025-05-17 15:51:37] 2025-05-17 19:50:52,700 | INFO     | job summary report
[2025-05-17 15:51:37] 2025-05-17 19:50:52,700 | INFO     | --------------------------------------------------
[2025-05-17 15:51:37] 2025-05-17 19:50:52,700 | INFO     | PanDA job id: 6656126861
[2025-05-17 15:51:37] 2025-05-17 19:50:52,700 | INFO     | task id: 44638099
[2025-05-17 15:51:37] 2025-05-17 19:50:52,700 | INFO     | errors: (none)
[2025-05-17 15:51:37] 2025-05-17 19:50:52,700 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 15:51:37] 2025-05-17 19:50:52,700 | INFO     | pilot state: finished 
[2025-05-17 15:51:37] 2025-05-17 19:50:52,700 | INFO     | transexitcode: 0
[2025-05-17 15:51:37] 2025-05-17 19:50:52,700 | INFO     | exeerrorcode: 0
[2025-05-17 15:51:37] 2025-05-17 19:50:52,700 | INFO     | exeerrordiag: 
[2025-05-17 15:51:37] 2025-05-17 19:50:52,700 | INFO     | exitcode: 0
[2025-05-17 15:51:37] 2025-05-17 19:50:52,700 | INFO     | exitmsg: OK
[2025-05-17 15:51:37] 2025-05-17 19:50:52,700 | INFO     | cpuconsumptiontime: 29334 s
[2025-05-17 15:51:37] 2025-05-17 19:50:52,700 | INFO     | nevents: 400
[2025-05-17 15:51:37] 2025-05-17 19:50:52,701 | INFO     | neventsw: 0
[2025-05-17 15:51:37] 2025-05-17 19:50:52,701 | INFO     | pid: 1141325
[2025-05-17 15:51:37] 2025-05-17 19:50:52,701 | INFO     | pgrp: 1141325
[2025-05-17 15:51:37] 2025-05-17 19:50:52,701 | INFO     | corecount: 8
[2025-05-17 15:51:37] 2025-05-17 19:50:52,701 | INFO     | event service: False
[2025-05-17 15:51:37] 2025-05-17 19:50:52,701 | INFO     | sizes: {0: 2393435, 1: 2393634, 8: 2393840, 11: 2393868, 7299: 2420989, 7300: 2429930, 7301: 2430114, 7308: 2430284}
[2025-05-17 15:51:37] 2025-05-17 19:50:52,701 | INFO     | --------------------------------------------------
[2025-05-17 15:51:37] 2025-05-17 19:50:52,701 | INFO     | 
[2025-05-17 15:51:37] 2025-05-17 19:50:52,701 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-05-17 15:51:37] 2025-05-17 19:50:52,721 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 15:51:37] 2025-05-17 19:50:52,722 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 15:51:37] 2025-05-17 19:50:52,722 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 15:51:37] 2025-05-17 19:50:52,722 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 15:51:37] 2025-05-17 19:50:52,722 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 15:51:37] 2025-05-17 19:50:52,722 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 15:51:37] 2025-05-17 19:50:52,722 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 15:51:37] 2025-05-17 19:50:52,722 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 15:51:37] 2025-05-17 19:50:52,722 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 15:51:37] 2025-05-17 19:50:52,722 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 15:51:37] 2025-05-17 19:50:52,722 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 15:51:37] 2025-05-17 19:50:52,722 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 15:51:37] 2025-05-17 19:50:52,722 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 15:51:37] 2025-05-17 19:50:52,722 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 15:51:37] 2025-05-17 19:50:52,722 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 15:51:37] 2025-05-17 19:50:52,722 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 15:51:37] 2025-05-17 19:50:52,722 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 15:51:37] 2025-05-17 19:50:52,722 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 15:51:37] 2025-05-17 19:50:52,723 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 15:51:37] 2025-05-17 19:50:52,723 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 15:51:37] 2025-05-17 19:50:52,723 | INFO     | job 6656126861 has completed (purged errors)
[2025-05-17 15:51:37] 2025-05-17 19:50:52,723 | INFO     | overall cleanup function is called
[2025-05-17 15:51:37] 2025-05-17 19:50:53,730 | INFO     | --- collectZombieJob: --- 10, [1141325]
[2025-05-17 15:51:37] 2025-05-17 19:50:53,730 | INFO     | zombie collector waiting for pid 1141325
[2025-05-17 15:51:37] 2025-05-17 19:50:53,730 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 15:51:37] 2025-05-17 19:50:53,730 | INFO     | collected zombie processes
[2025-05-17 15:51:37] 2025-05-17 19:50:53,730 | INFO     | will attempt to kill all subprocesses of pid=1141325
[2025-05-17 15:51:37] 2025-05-17 19:50:54,255 | INFO     | process IDs to be killed: [1141325] (in reverse order)
[2025-05-17 15:51:37] 2025-05-17 19:50:54,446 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 15:51:37] 2025-05-17 19:50:54,447 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 15:51:37] 2025-05-17 19:50:54,475 | INFO     | did not find any defunct processes belonging to 1141325
[2025-05-17 15:51:37] 2025-05-17 19:50:54,501 | INFO     | did not find any defunct processes belonging to 1141325
[2025-05-17 15:51:37] 2025-05-17 19:50:54,502 | INFO     | ready for new job
[2025-05-17 15:51:37] 2025-05-17 19:50:54,502 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 15:51:37] 2025-05-17 19:50:54,503 | INFO     | **************************************
[2025-05-17 15:51:37] 2025-05-17 19:50:54,503 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 15:51:37] 2025-05-17 19:50:54,503 | INFO     | **************************************
[2025-05-17 15:51:37] 2025-05-17 19:50:54,503 | INFO     | 
[2025-05-17 15:51:37] 2025-05-17 19:50:54,508 | INFO     | architecture information:
[2025-05-17 15:51:37] 2025-05-17 19:50:54,508 | INFO     | executing command: cat /etc/os-release
[2025-05-17 15:51:37] 2025-05-17 19:50:54,529 | INFO     | cat /etc/os-release:
[2025-05-17 15:51:37] NAME="CentOS Linux"
[2025-05-17 15:51:37] VERSION="7 (Core)"
[2025-05-17 15:51:37] ID="centos"
[2025-05-17 15:51:37] ID_LIKE="rhel fedora"
[2025-05-17 15:51:37] VERSION_ID="7"
[2025-05-17 15:51:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 15:51:37] ANSI_COLOR="0;31"
[2025-05-17 15:51:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 15:51:37] HOME_URL="https://www.centos.org/"
[2025-05-17 15:51:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 15:51:37] 
[2025-05-17 15:51:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 15:51:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 15:51:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 15:51:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 15:51:37] 
[2025-05-17 15:51:37] 2025-05-17 19:50:54,530 | INFO     | **************************************
[2025-05-17 15:51:37] 2025-05-17 19:50:55,033 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-05-17 15:51:37] 2025-05-17 19:50:55,067 | INFO     | sufficient remaining disk space (72854011904 B)
[2025-05-17 15:51:37] 2025-05-17 19:50:55,068 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 15:51:37] 2025-05-17 19:50:55,068 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 15:51:37] 2025-05-17 19:50:55,068 | INFO     | update_server=False
[2025-05-17 15:51:37] 2025-05-17 19:50:55,068 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 15:51:37] 2025-05-17 19:50:55,299 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 15:51:37] 2025-05-17 19:50:55,467 | INFO     | all job control threads have been joined
[2025-05-17 15:51:37] 2025-05-17 19:50:55,552 | INFO     | all data control threads have been joined
[2025-05-17 15:51:37] 2025-05-17 19:50:55,814 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 15:51:37] 2025-05-17 19:50:55,814 | INFO     | aborting loop
[2025-05-17 15:51:37] 2025-05-17 19:50:55,969 | INFO     | all payload control threads have been joined
[2025-05-17 15:51:37] 2025-05-17 19:50:56,075 | INFO     | [job] retrieve thread has finished
[2025-05-17 15:51:37] 2025-05-17 19:50:56,255 | INFO     | [data] copytool_in thread has finished
[2025-05-17 15:51:37] 2025-05-17 19:50:56,392 | INFO     | [payload] validate_post thread has finished
[2025-05-17 15:51:37] 2025-05-17 19:50:56,407 | INFO     | [payload] failed_post thread has finished
[2025-05-17 15:51:37] 2025-05-17 19:50:56,473 | INFO     | [job] control thread has finished
[2025-05-17 15:51:37] 2025-05-17 19:50:56,558 | INFO     | [data] control thread has finished
[2025-05-17 15:51:37] 2025-05-17 19:50:56,673 | INFO     | PID=1105273 has CPU usage=13.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-05-17 15:51:37] 2025-05-17 19:50:56,673 | INFO     | .. there are 79 such processes running
[2025-05-17 15:51:37] 2025-05-17 19:50:56,673 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 15:51:37] 2025-05-17 19:50:56,673 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 15:51:37] 2025-05-17 19:50:56,673 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 15:51:37] 2025-05-17 19:50:56,753 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 15:51:37] 2025-05-17 19:50:56,819 | INFO     | [job] job monitor thread has finished
[2025-05-17 15:51:37] 2025-05-17 19:50:56,885 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 15:51:37] 2025-05-17 19:50:56,974 | INFO     | [payload] control thread has finished
[2025-05-17 15:51:37] 2025-05-17 19:50:57,133 | INFO     | [job] validate thread has finished
[2025-05-17 15:51:37] 2025-05-17 19:50:57,142 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 15:51:37] 2025-05-17 19:50:57,308 | INFO     | [data] copytool_out thread has finished
[2025-05-17 15:51:37] 2025-05-17 19:50:57,391 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 15:51:37] 2025-05-17 19:50:57,458 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 15:51:37] 2025-05-17 19:50:57,712 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 15:51:37] 2025-05-17 19:50:58,717 | INFO     | [job] queue monitor thread has finished
[2025-05-17 15:51:37] 2025-05-17 19:51:00,891 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 15:51:37] 2025-05-17 19:51:02,756 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139861530539840)>', '<ExcThread(monitor, started 139860912371456)>']
[2025-05-17 15:51:37] 2025-05-17 19:51:03,710 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 15:51:37] 2025-05-17 19:51:03,711 | INFO     | [monitor] control thread has ended
[2025-05-17 15:51:37] 2025-05-17 19:51:07,783 | INFO     | all workflow threads have been joined
[2025-05-17 15:51:37] 2025-05-17 19:51:07,784 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 15:51:37] 2025-05-17 19:51:07,784 | INFO     | traces error code: 0
[2025-05-17 15:51:37] 2025-05-17 19:51:07,784 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 15:51:37] 2025-05-17 19:51:07,933 [wrapper] ==== pilot stdout END ====
[2025-05-17 15:51:37] 2025-05-17 19:51:07,936 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 15:51:37] 2025-05-17 19:51:07,945 [wrapper] pilotpid: 1105273
[2025-05-17 15:51:37] 2025-05-17 19:51:07,952 [wrapper] Pilot exit status: 0
[2025-05-17 15:51:37] 2025-05-17 19:51:08,025 [wrapper] pandaids: 6656126861
[2025-05-17 15:51:37] 2025-05-17 19:51:08,168 [wrapper] cleanup supervisor_pilot 3672319 1105274
[2025-05-17 15:51:37] 2025-05-17 19:51:08,177 [wrapper] Test setup, not cleaning
[2025-05-17 15:51:37] 2025-05-17 19:51:08,179 [wrapper] apfmon messages muted
[2025-05-17 15:51:37] 2025-05-17 19:51:08,181 [wrapper] ==== wrapper stdout END ====
[2025-05-17 15:51:37] 2025-05-17 19:51:08,183 [wrapper] ==== wrapper stderr END ====
[2025-05-17 15:51:37]  *** Error codes and diagnostics ***
[2025-05-17 15:51:37]     "exeErrorCode": 0,
[2025-05-17 15:51:37]     "exeErrorDiag": "",
[2025-05-17 15:51:37]     "pilotErrorCode": 0,
[2025-05-17 15:51:37]     "pilotErrorDiag": "",
[2025-05-17 15:51:37]  *** Listing of results directory ***
[2025-05-17 15:51:37] total 418864
[2025-05-17 15:51:37] -rw-r--r--. 1 boincer umatlas    495897 May 17 11:57 pilot3.tar.gz
[2025-05-17 15:51:37] -rwx------. 1 boincer umatlas     37140 May 17 11:58 runpilot2-wrapper.sh
[2025-05-17 15:51:37] -rw-r--r--. 1 boincer umatlas      5111 May 17 11:58 queuedata.json
[2025-05-17 15:51:37] -rw-r--r--. 1 boincer umatlas       100 May 17 13:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 15:51:37] -rwxr-xr-x. 1 boincer umatlas      7986 May 17 13:48 run_atlas
[2025-05-17 15:51:37] -rw-r--r--. 1 boincer umatlas       105 May 17 13:48 job.xml
[2025-05-17 15:51:37] -rw-r--r--. 2 boincer umatlas 222805870 May 17 13:48 EVNT.44638096._001935.pool.root.1
[2025-05-17 15:51:37] -rw-r--r--. 2 boincer umatlas     17569 May 17 13:48 start_atlas.sh
[2025-05-17 15:51:37] drwxrwx--x. 2 boincer umatlas      4096 May 17 13:48 shared
[2025-05-17 15:51:37] -rw-r--r--. 2 boincer umatlas    508882 May 17 13:48 input.tar.gz
[2025-05-17 15:51:37] -rw-r--r--. 1 boincer umatlas         0 May 17 13:48 boinc_lockfile
[2025-05-17 15:51:37] -rw-r--r--. 1 boincer umatlas      2536 May 17 13:48 pandaJob.out
[2025-05-17 15:51:37] -rw-------. 1 boincer umatlas       467 May 17 13:48 setup.sh.local
[2025-05-17 15:51:37] -rw-------. 1 boincer umatlas    994635 May 17 13:48 agis_schedconf.cvmfs.json
[2025-05-17 15:51:37] -rw-------. 1 boincer umatlas   1596741 May 17 13:48 agis_ddmendpoints.agis.ALL.json
[2025-05-17 15:51:37] drwx------. 4 boincer umatlas      4096 May 17 13:48 pilot3
[2025-05-17 15:51:37] -rw-r--r--. 1 boincer umatlas      7159 May 17 15:49 init_data.xml
[2025-05-17 15:51:37] -rw-------. 1 boincer umatlas        95 May 17 15:50 pilot_heartbeat.json
[2025-05-17 15:51:37] -rw-------. 1 boincer umatlas 200360735 May 17 15:50 HITS.44638099._057180.pool.root.1
[2025-05-17 15:51:37] -rw-r--r--. 1 boincer umatlas       530 May 17 15:50 boinc_task_state.xml
[2025-05-17 15:51:37] -rw-------. 1 boincer umatlas      1036 May 17 15:50 memory_monitor_summary.json
[2025-05-17 15:51:37] -rw-------. 1 boincer umatlas    314116 May 17 15:50 log.44638099._057180.job.log.tgz.1
[2025-05-17 15:51:37] -rw-------. 1 boincer umatlas      7688 May 17 15:50 heartbeat.json
[2025-05-17 15:51:37] -rw-------. 1 boincer umatlas      4749 May 17 15:51 pilotlog.txt
[2025-05-17 15:51:37] -rw-------. 1 boincer umatlas    635952 May 17 15:51 log.44638099._057180.job.log.1
[2025-05-17 15:51:37] -rw-------. 1 boincer umatlas       357 May 17 15:51 output.list
[2025-05-17 15:51:37] -rw-r--r--. 1 boincer umatlas       620 May 17 15:51 runtime_log
[2025-05-17 15:51:37] -rw-------. 1 boincer umatlas    972800 May 17 15:51 result.tar.gz
[2025-05-17 15:51:37] -rw-r--r--. 1 boincer umatlas     11413 May 17 15:51 runtime_log.err
[2025-05-17 15:51:37] -rw-------. 1 boincer umatlas       651 May 17 15:51 1WYKDmU6Ya7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnlOKDmMnco6n.diag
[2025-05-17 15:51:37] -rw-r--r--. 1 boincer umatlas        27 May 17 15:51 wrapper_checkpoint.txt
[2025-05-17 15:51:37] -rw-r--r--. 1 boincer umatlas      8192 May 17 15:51 boinc_mmap_file
[2025-05-17 15:51:37] -rw-r--r--. 1 boincer umatlas     20813 May 17 15:51 stderr.txt
[2025-05-17 15:51:37] HITS file was successfully produced:
[2025-05-17 15:51:37] -rw-------. 1 boincer umatlas 200360735 May 17 15:50 shared/HITS.pool.root.1
[2025-05-17 15:51:37]  *** Contents of shared directory: ***
[2025-05-17 15:51:37] total 414732
[2025-05-17 15:51:37] -rw-r--r--. 2 boincer umatlas 222805870 May 17 13:48 ATLAS.root_0
[2025-05-17 15:51:37] -rw-r--r--. 2 boincer umatlas     17569 May 17 13:48 start_atlas.sh
[2025-05-17 15:51:37] -rw-r--r--. 2 boincer umatlas    508882 May 17 13:48 input.tar.gz
[2025-05-17 15:51:37] -rw-------. 1 boincer umatlas 200360735 May 17 15:50 HITS.pool.root.1
[2025-05-17 15:51:37] -rw-------. 1 boincer umatlas    972800 May 17 15:51 result.tar.gz
15:51:39 (1085581): run_atlas exited; CPU time 29518.864420
15:51:39 (1085581): called boinc_finish(0)

</stderr_txt>
]]>

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