Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:18:15 (3077871): wrapper (7.7.26015): starting
13:18:15 (3077871): wrapper: running run_atlas (--nthreads 8)
[2025-05-17 13:18:15] Arguments: --nthreads 8
[2025-05-17 13:18:15] Threads: 8
[2025-05-17 13:18:15] Checking for CVMFS
[2025-05-17 13:18:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 13:18:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 13:18:16] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 13:18:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 13:18:17] 2.12.6.0 10250 5773 260928 146108 1 64 31295190 32935937 27987 16776704 1 26773011 99.616 27151272 27409 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-17 13:18:17] CVMFS is ok
[2025-05-17 13:18:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-17 13:18:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-17 13:18:17] Further information can be found at the LHC@home message board.
[2025-05-17 13:18:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 13:18:17] Checking for apptainer binary...
[2025-05-17 13:18:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 13:18:17] Running /usr/bin/apptainer --version
[2025-05-17 13:18:17] apptainer version 1.4.0-1.el9
[2025-05-17 13:18:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 13:18:18] c6-12-29-2.aglt2.org
[2025-05-17 13:18:18] apptainer works
[2025-05-17 13:18:18] Set ATHENA_PROC_NUMBER=8
[2025-05-17 13:18:18] Set ATHENA_CORE_NUMBER=8
[2025-05-17 13:18:18] Starting ATLAS job with PandaID=6646756418
[2025-05-17 13:18:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 16:18:13]  *** The last 200 lines of the pilot log: ***
[2025-05-17 16:18:13] 2025-05-17 20:17:59,341 | INFO     | mean x: 1747507753.5287356
[2025-05-17 16:18:13] 2025-05-17 20:17:59,342 | INFO     | mean y: 2096157.3620689656
[2025-05-17 16:18:13] 2025-05-17 20:17:59,342 | INFO     | -- intersect: -48737468827.96364
[2025-05-17 16:18:13] 2025-05-17 20:17:59,342 | INFO     | intersect: -48737468827.96364
[2025-05-17 16:18:13] 2025-05-17 20:17:59,342 | INFO     | chi2: 4.62170892348247
[2025-05-17 16:18:13] 2025-05-17 20:17:59,342 | INFO     | sum of square deviations: 1496660258.8520725
[2025-05-17 16:18:13] 2025-05-17 20:17:59,343 | INFO     | sum of deviations: 46153624572.544395
[2025-05-17 16:18:13] 2025-05-17 20:17:59,343 | INFO     | mean x: 1747507601.0295858
[2025-05-17 16:18:13] 2025-05-17 20:17:59,343 | INFO     | mean y: 2096769.4911242602
[2025-05-17 16:18:13] 2025-05-17 20:17:59,344 | INFO     | -- intersect: -53887093698.79063
[2025-05-17 16:18:13] 2025-05-17 20:17:59,344 | INFO     | intersect: -53887093698.79063
[2025-05-17 16:18:13] 2025-05-17 20:17:59,344 | INFO     | chi2: 4.605475090535918
[2025-05-17 16:18:13] 2025-05-17 20:17:59,344 | INFO     | current chi2=4.605475090535918 (change=0.35125173859543074 %)
[2025-05-17 16:18:13] 2025-05-17 20:17:59,344 | INFO     | right removable region: 168
[2025-05-17 16:18:13] 2025-05-17 20:17:59,344 | INFO     | sum of square deviations: 1496657208.8520725
[2025-05-17 16:18:13] 2025-05-17 20:17:59,345 | INFO     | sum of deviations: 9937258892.142017
[2025-05-17 16:18:13] 2025-05-17 20:17:59,345 | INFO     | mean x: 1747507906.0295858
[2025-05-17 16:18:13] 2025-05-17 20:17:59,345 | INFO     | mean y: 2135697.171597633
[2025-05-17 16:18:13] 2025-05-17 20:17:59,346 | INFO     | -- intersect: -11600680482.49333
[2025-05-17 16:18:13] 2025-05-17 20:17:59,346 | INFO     | intersect: -11600680482.49333
[2025-05-17 16:18:13] 2025-05-17 20:17:59,346 | INFO     | chi2: 2.0515860407200943
[2025-05-17 16:18:13] 2025-05-17 20:17:59,346 | INFO     | current chi2=2.0515860407200943 (change=55.609795539131035 %)
[2025-05-17 16:18:13] 2025-05-17 20:17:59,346 | INFO     | sum of square deviations: 1367704428.8475583
[2025-05-17 16:18:13] 2025-05-17 20:17:59,347 | INFO     | sum of deviations: -11961431458.713404
[2025-05-17 16:18:13] 2025-05-17 20:17:59,347 | INFO     | mean x: 1747508058.5304878
[2025-05-17 16:18:13] 2025-05-17 20:17:59,347 | INFO     | mean y: 2161589.0426829266
[2025-05-17 16:18:13] 2025-05-17 20:17:59,347 | INFO     | -- intersect: 15285213559.031979
[2025-05-17 16:18:13] 2025-05-17 20:17:59,347 | INFO     | intersect: 15285213559.031979
[2025-05-17 16:18:13] 2025-05-17 20:17:59,348 | INFO     | chi2: 1.108728075720443
[2025-05-17 16:18:13] 2025-05-17 20:17:59,348 | INFO     | current chi2=1.108728075720443 (change=45.95751512662437 %)
[2025-05-17 16:18:13] 2025-05-17 20:17:59,348 | INFO     | sum of square deviations: 1246379698.8427641
[2025-05-17 16:18:13] 2025-05-17 20:17:59,349 | INFO     | sum of deviations: -30322423191.496845
[2025-05-17 16:18:13] 2025-05-17 20:17:59,349 | INFO     | mean x: 1747508211.0314465
[2025-05-17 16:18:13] 2025-05-17 20:17:59,349 | INFO     | mean y: 2184597.8993710694
[2025-05-17 16:18:13] 2025-05-17 20:17:59,349 | INFO     | -- intersect: 42516262414.402565
[2025-05-17 16:18:13] 2025-05-17 20:17:59,349 | INFO     | intersect: 42516262414.402565
[2025-05-17 16:18:13] 2025-05-17 20:17:59,350 | INFO     | chi2: 0.36636676309492294
[2025-05-17 16:18:13] 2025-05-17 20:17:59,350 | INFO     | current chi2=0.36636676309492294 (change=66.95612106179772 %)
[2025-05-17 16:18:13] 2025-05-17 20:17:59,350 | INFO     | sum of square deviations: 1132450456.337665
[2025-05-17 16:18:13] 2025-05-17 20:17:59,351 | INFO     | sum of deviations: -29246923373.896107
[2025-05-17 16:18:13] 2025-05-17 20:17:59,351 | INFO     | mean x: 1747508363.5324676
[2025-05-17 16:18:13] 2025-05-17 20:17:59,351 | INFO     | mean y: 2183041.7792207794
[2025-05-17 16:18:13] 2025-05-17 20:17:59,351 | INFO     | -- intersect: 45133731991.62336
[2025-05-17 16:18:13] 2025-05-17 20:17:59,351 | INFO     | intersect: 45133731991.62336
[2025-05-17 16:18:13] 2025-05-17 20:17:59,351 | INFO     | chi2: 0.3142098694729234
[2025-05-17 16:18:13] 2025-05-17 20:17:59,351 | INFO     | current chi2=0.3142098694729234 (change=14.23625144961255 %)
[2025-05-17 16:18:13] 2025-05-17 20:17:59,351 | INFO     | left removable region: 40
[2025-05-17 16:18:13] 2025-05-17 20:17:59,352 | INFO     | sum of square deviations: 650247803.875
[2025-05-17 16:18:13] 2025-05-17 20:17:59,352 | INFO     | sum of deviations: -1861650913.84375
[2025-05-17 16:18:13] 2025-05-17 20:17:59,352 | INFO     | mean x: 1747508790.53125
[2025-05-17 16:18:13] 2025-05-17 20:17:59,352 | INFO     | mean y: 2143826.5859375
[2025-05-17 16:18:13] 2025-05-17 20:17:59,353 | INFO     | -- intersect: 5005238519.802117
[2025-05-17 16:18:13] 2025-05-17 20:17:59,353 | INFO     | intersect: 5005238519.802117
[2025-05-17 16:18:13] 2025-05-17 20:17:59,353 | INFO     | chi2: 0.08856519526971046
[2025-05-17 16:18:13] 2025-05-17 20:17:59,353 | INFO     | -- intersect: 5005238519.802117
[2025-05-17 16:18:13] 2025-05-17 20:17:59,353 | INFO     | current memory leak: -2.86 B/s (using 128 data points, chi2=0.09)
[2025-05-17 16:18:13] 2025-05-17 20:17:59,354 | INFO     | ..............................
[2025-05-17 16:18:13] 2025-05-17 20:17:59,354 | INFO     | . Timing measurements:
[2025-05-17 16:18:13] 2025-05-17 20:17:59,354 | INFO     | . get job = 0 s
[2025-05-17 16:18:13] 2025-05-17 20:17:59,354 | INFO     | . initial setup = 5 s
[2025-05-17 16:18:13] 2025-05-17 20:17:59,354 | INFO     | . payload setup = 36 s
[2025-05-17 16:18:13] 2025-05-17 20:17:59,354 | INFO     | . stage-in = 0 s
[2025-05-17 16:18:13] 2025-05-17 20:17:59,354 | INFO     | . payload execution = 10614 s
[2025-05-17 16:18:13] 2025-05-17 20:17:59,354 | INFO     | . stage-out = 0 s
[2025-05-17 16:18:13] 2025-05-17 20:17:59,354 | INFO     | . log creation = 0 s
[2025-05-17 16:18:13] 2025-05-17 20:17:59,354 | INFO     | ..............................
[2025-05-17 16:18:13] 2025-05-17 20:17:59,441 | INFO     | 
[2025-05-17 16:18:13] 2025-05-17 20:17:59,442 | INFO     | job summary report
[2025-05-17 16:18:13] 2025-05-17 20:17:59,442 | INFO     | --------------------------------------------------
[2025-05-17 16:18:13] 2025-05-17 20:17:59,442 | INFO     | PanDA job id: 6646756418
[2025-05-17 16:18:13] 2025-05-17 20:17:59,442 | INFO     | task id: 44638099
[2025-05-17 16:18:13] 2025-05-17 20:17:59,442 | INFO     | errors: (none)
[2025-05-17 16:18:13] 2025-05-17 20:17:59,442 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 16:18:13] 2025-05-17 20:17:59,442 | INFO     | pilot state: finished 
[2025-05-17 16:18:13] 2025-05-17 20:17:59,442 | INFO     | transexitcode: 0
[2025-05-17 16:18:13] 2025-05-17 20:17:59,442 | INFO     | exeerrorcode: 0
[2025-05-17 16:18:13] 2025-05-17 20:17:59,442 | INFO     | exeerrordiag: 
[2025-05-17 16:18:13] 2025-05-17 20:17:59,442 | INFO     | exitcode: 0
[2025-05-17 16:18:13] 2025-05-17 20:17:59,442 | INFO     | exitmsg: OK
[2025-05-17 16:18:13] 2025-05-17 20:17:59,442 | INFO     | cpuconsumptiontime: 53925 s
[2025-05-17 16:18:13] 2025-05-17 20:17:59,442 | INFO     | nevents: 400
[2025-05-17 16:18:13] 2025-05-17 20:17:59,443 | INFO     | neventsw: 0
[2025-05-17 16:18:13] 2025-05-17 20:17:59,443 | INFO     | pid: 3098425
[2025-05-17 16:18:13] 2025-05-17 20:17:59,443 | INFO     | pgrp: 3098425
[2025-05-17 16:18:13] 2025-05-17 20:17:59,443 | INFO     | corecount: 8
[2025-05-17 16:18:13] 2025-05-17 20:17:59,443 | INFO     | event service: False
[2025-05-17 16:18:13] 2025-05-17 20:17:59,443 | INFO     | sizes: {0: 2393473, 1: 2393728, 2: 2393728, 12: 2393756, 23: 2393784, 28: 2394018, 34: 2394174, 10655: 2423000, 10657: 2431941, 10660: 2431997, 10666: 2432167}
[2025-05-17 16:18:13] 2025-05-17 20:17:59,443 | INFO     | --------------------------------------------------
[2025-05-17 16:18:13] 2025-05-17 20:17:59,443 | INFO     | 
[2025-05-17 16:18:13] 2025-05-17 20:17:59,443 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-05-17 16:18:13] 2025-05-17 20:17:59,465 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 16:18:13] 2025-05-17 20:17:59,465 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 16:18:13] 2025-05-17 20:17:59,465 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 16:18:13] 2025-05-17 20:17:59,465 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 16:18:13] 2025-05-17 20:17:59,466 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 16:18:13] 2025-05-17 20:17:59,466 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 16:18:13] 2025-05-17 20:17:59,466 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 16:18:13] 2025-05-17 20:17:59,466 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 16:18:13] 2025-05-17 20:17:59,466 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 16:18:13] 2025-05-17 20:17:59,466 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 16:18:13] 2025-05-17 20:17:59,466 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 16:18:13] 2025-05-17 20:17:59,466 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 16:18:13] 2025-05-17 20:17:59,466 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 16:18:13] 2025-05-17 20:17:59,466 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 16:18:13] 2025-05-17 20:17:59,466 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 16:18:13] 2025-05-17 20:17:59,466 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 16:18:13] 2025-05-17 20:17:59,467 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 16:18:13] 2025-05-17 20:17:59,467 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 16:18:13] 2025-05-17 20:17:59,467 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 16:18:13] 2025-05-17 20:17:59,467 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 16:18:13] 2025-05-17 20:17:59,467 | INFO     | job 6646756418 has completed (purged errors)
[2025-05-17 16:18:13] 2025-05-17 20:17:59,467 | INFO     | overall cleanup function is called
[2025-05-17 16:18:13] 2025-05-17 20:18:00,475 | INFO     | --- collectZombieJob: --- 10, [3098425]
[2025-05-17 16:18:13] 2025-05-17 20:18:00,476 | INFO     | zombie collector waiting for pid 3098425
[2025-05-17 16:18:13] 2025-05-17 20:18:00,476 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 16:18:13] 2025-05-17 20:18:00,476 | INFO     | collected zombie processes
[2025-05-17 16:18:13] 2025-05-17 20:18:00,476 | INFO     | will attempt to kill all subprocesses of pid=3098425
[2025-05-17 16:18:13] 2025-05-17 20:18:00,625 | INFO     | PID=3085126 has CPU usage=11.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-05-17 16:18:13] 2025-05-17 20:18:00,626 | INFO     | .. there are 34 such processes running
[2025-05-17 16:18:13] 2025-05-17 20:18:00,928 | INFO     | process IDs to be killed: [3098425] (in reverse order)
[2025-05-17 16:18:13] 2025-05-17 20:18:01,041 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 16:18:13] 2025-05-17 20:18:01,041 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 16:18:13] 2025-05-17 20:18:01,057 | INFO     | did not find any defunct processes belonging to 3098425
[2025-05-17 16:18:13] 2025-05-17 20:18:01,072 | INFO     | did not find any defunct processes belonging to 3098425
[2025-05-17 16:18:13] 2025-05-17 20:18:01,073 | INFO     | ready for new job
[2025-05-17 16:18:13] 2025-05-17 20:18:01,073 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 16:18:13] 2025-05-17 20:18:01,074 | INFO     | **************************************
[2025-05-17 16:18:13] 2025-05-17 20:18:01,074 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 16:18:13] 2025-05-17 20:18:01,075 | INFO     | **************************************
[2025-05-17 16:18:13] 2025-05-17 20:18:01,075 | INFO     | 
[2025-05-17 16:18:13] 2025-05-17 20:18:01,091 | INFO     | architecture information:
[2025-05-17 16:18:13] 2025-05-17 20:18:01,092 | INFO     | executing command: cat /etc/os-release
[2025-05-17 16:18:13] 2025-05-17 20:18:01,109 | INFO     | cat /etc/os-release:
[2025-05-17 16:18:13] NAME="CentOS Linux"
[2025-05-17 16:18:13] VERSION="7 (Core)"
[2025-05-17 16:18:13] ID="centos"
[2025-05-17 16:18:13] ID_LIKE="rhel fedora"
[2025-05-17 16:18:13] VERSION_ID="7"
[2025-05-17 16:18:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 16:18:13] ANSI_COLOR="0;31"
[2025-05-17 16:18:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 16:18:13] HOME_URL="https://www.centos.org/"
[2025-05-17 16:18:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 16:18:13] 
[2025-05-17 16:18:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 16:18:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 16:18:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 16:18:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 16:18:13] 
[2025-05-17 16:18:13] 2025-05-17 20:18:01,110 | INFO     | **************************************
[2025-05-17 16:18:13] 2025-05-17 20:18:01,612 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-05-17 16:18:13] 2025-05-17 20:18:01,627 | INFO     | sufficient remaining disk space (94715772928 B)
[2025-05-17 16:18:13] 2025-05-17 20:18:01,628 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 16:18:13] 2025-05-17 20:18:01,628 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 16:18:13] 2025-05-17 20:18:01,628 | INFO     | update_server=False
[2025-05-17 16:18:13] 2025-05-17 20:18:01,628 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 16:18:13] 2025-05-17 20:18:01,628 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 16:18:13] 2025-05-17 20:18:02,193 | INFO     | all job control threads have been joined
[2025-05-17 16:18:13] 2025-05-17 20:18:02,286 | INFO     | all data control threads have been joined
[2025-05-17 16:18:13] 2025-05-17 20:18:02,447 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 16:18:13] 2025-05-17 20:18:02,447 | INFO     | aborting loop
[2025-05-17 16:18:13] 2025-05-17 20:18:02,631 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 16:18:13] 2025-05-17 20:18:02,632 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 16:18:13] 2025-05-17 20:18:02,632 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 16:18:13] 2025-05-17 20:18:02,633 | INFO     | [job] retrieve thread has finished
[2025-05-17 16:18:13] 2025-05-17 20:18:02,754 | INFO     | [payload] validate_post thread has finished
[2025-05-17 16:18:13] 2025-05-17 20:18:02,878 | INFO     | all payload control threads have been joined
[2025-05-17 16:18:13] 2025-05-17 20:18:02,966 | INFO     | [data] copytool_in thread has finished
[2025-05-17 16:18:13] 2025-05-17 20:18:02,999 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 16:18:13] 2025-05-17 20:18:03,009 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 16:18:13] 2025-05-17 20:18:03,198 | INFO     | [job] control thread has finished
[2025-05-17 16:18:13] 2025-05-17 20:18:03,291 | INFO     | [data] control thread has finished
[2025-05-17 16:18:13] 2025-05-17 20:18:03,448 | INFO     | [job] job monitor thread has finished
[2025-05-17 16:18:13] 2025-05-17 20:18:03,630 | INFO     | [data] copytool_out thread has finished
[2025-05-17 16:18:13] 2025-05-17 20:18:03,679 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 16:18:13] 2025-05-17 20:18:03,753 | INFO     | [payload] failed_post thread has finished
[2025-05-17 16:18:13] 2025-05-17 20:18:03,882 | INFO     | [payload] control thread has finished
[2025-05-17 16:18:13] 2025-05-17 20:18:03,941 | INFO     | [job] validate thread has finished
[2025-05-17 16:18:13] 2025-05-17 20:18:04,105 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 16:18:13] 2025-05-17 20:18:04,218 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 16:18:13] 2025-05-17 20:18:04,452 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 16:18:13] 2025-05-17 20:18:05,458 | INFO     | [job] queue monitor thread has finished
[2025-05-17 16:18:13] 2025-05-17 20:18:08,226 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 16:18:13] 2025-05-17 20:18:08,624 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140505505236800)>', '<ExcThread(monitor, started 140504998070016)>']
[2025-05-17 16:18:13] 2025-05-17 20:18:08,657 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 16:18:13] 2025-05-17 20:18:08,658 | INFO     | [monitor] control thread has ended
[2025-05-17 16:18:13] 2025-05-17 20:18:13,649 | INFO     | all workflow threads have been joined
[2025-05-17 16:18:13] 2025-05-17 20:18:13,650 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 16:18:13] 2025-05-17 20:18:13,650 | INFO     | traces error code: 0
[2025-05-17 16:18:13] 2025-05-17 20:18:13,650 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 16:18:13] 2025-05-17 20:18:13,817 [wrapper] ==== pilot stdout END ====
[2025-05-17 16:18:13] 2025-05-17 20:18:13,820 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 16:18:13] 2025-05-17 20:18:13,822 [wrapper] pilotpid: 3085126
[2025-05-17 16:18:13] 2025-05-17 20:18:13,825 [wrapper] Pilot exit status: 0
[2025-05-17 16:18:13] 2025-05-17 20:18:13,833 [wrapper] pandaids: 6646756418
[2025-05-17 16:18:13] 2025-05-17 20:18:13,907 [wrapper] cleanup supervisor_pilot 3996997 3085127
[2025-05-17 16:18:13] 2025-05-17 20:18:13,910 [wrapper] Test setup, not cleaning
[2025-05-17 16:18:13] 2025-05-17 20:18:13,912 [wrapper] apfmon messages muted
[2025-05-17 16:18:13] 2025-05-17 20:18:13,914 [wrapper] ==== wrapper stdout END ====
[2025-05-17 16:18:13] 2025-05-17 20:18:13,916 [wrapper] ==== wrapper stderr END ====
[2025-05-17 16:18:13]  *** Error codes and diagnostics ***
[2025-05-17 16:18:13]     "exeErrorCode": 0,
[2025-05-17 16:18:13]     "exeErrorDiag": "",
[2025-05-17 16:18:13]     "pilotErrorCode": 0,
[2025-05-17 16:18:13]     "pilotErrorDiag": "",
[2025-05-17 16:18:13]  *** Listing of results directory ***
[2025-05-17 16:18:13] total 417048
[2025-05-17 16:18:13] -rw-r--r--. 1 boincer umatlas    495897 May 12 17:56 pilot3.tar.gz
[2025-05-17 16:18:13] -rwx------. 1 boincer umatlas     37140 May 12 18:05 runpilot2-wrapper.sh
[2025-05-17 16:18:13] -rw-r--r--. 1 boincer umatlas      5111 May 12 18:05 queuedata.json
[2025-05-17 16:18:13] -rw-r--r--. 1 boincer umatlas       100 May 17 13:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 16:18:13] -rwxr-xr-x. 1 boincer umatlas      7986 May 17 13:18 run_atlas
[2025-05-17 16:18:13] -rw-r--r--. 1 boincer umatlas       105 May 17 13:18 job.xml
[2025-05-17 16:18:13] -rw-r--r--. 2 boincer umatlas 221321875 May 17 13:18 EVNT.44638096._000012.pool.root.1
[2025-05-17 16:18:13] -rw-r--r--. 2 boincer umatlas     17569 May 17 13:18 start_atlas.sh
[2025-05-17 16:18:13] drwxrwx--x. 2 boincer umatlas      4096 May 17 13:18 shared
[2025-05-17 16:18:13] -rw-r--r--. 2 boincer umatlas    508865 May 17 13:18 input.tar.gz
[2025-05-17 16:18:13] -rw-r--r--. 1 boincer umatlas         0 May 17 13:18 boinc_lockfile
[2025-05-17 16:18:13] -rw-r--r--. 1 boincer umatlas      2533 May 17 13:18 pandaJob.out
[2025-05-17 16:18:13] -rw-------. 1 boincer umatlas       467 May 17 13:18 setup.sh.local
[2025-05-17 16:18:13] -rw-------. 1 boincer umatlas    994635 May 17 13:19 agis_schedconf.cvmfs.json
[2025-05-17 16:18:13] -rw-------. 1 boincer umatlas   1596741 May 17 13:19 agis_ddmendpoints.agis.ALL.json
[2025-05-17 16:18:13] drwx------. 4 boincer umatlas      4096 May 17 13:19 pilot3
[2025-05-17 16:18:13] -rw-r--r--. 1 boincer umatlas      6858 May 17 16:12 init_data.xml
[2025-05-17 16:18:13] -rw-------. 1 boincer umatlas 199265330 May 17 16:17 HITS.44638099._000255.pool.root.1
[2025-05-17 16:18:13] -rw-r--r--. 1 boincer umatlas       531 May 17 16:17 boinc_task_state.xml
[2025-05-17 16:18:13] -rw-------. 1 boincer umatlas        95 May 17 16:17 pilot_heartbeat.json
[2025-05-17 16:18:13] -rw-------. 1 boincer umatlas      1042 May 17 16:17 memory_monitor_summary.json
[2025-05-17 16:18:13] -rw-------. 1 boincer umatlas    353025 May 17 16:17 log.44638099._000255.job.log.tgz.1
[2025-05-17 16:18:13] -rw-------. 1 boincer umatlas      7723 May 17 16:17 heartbeat.json
[2025-05-17 16:18:13] -rw-r--r--. 1 boincer umatlas      8192 May 17 16:18 boinc_mmap_file
[2025-05-17 16:18:13] -rw-r--r--. 1 boincer umatlas        28 May 17 16:18 wrapper_checkpoint.txt
[2025-05-17 16:18:13] -rw-------. 1 boincer umatlas      4353 May 17 16:18 pilotlog.txt
[2025-05-17 16:18:13] -rw-------. 1 boincer umatlas    960829 May 17 16:18 log.44638099._000255.job.log.1
[2025-05-17 16:18:13] -rw-------. 1 boincer umatlas       357 May 17 16:18 output.list
[2025-05-17 16:18:13] -rw-r--r--. 1 boincer umatlas       620 May 17 16:18 runtime_log
[2025-05-17 16:18:13] -rw-------. 1 boincer umatlas   1331200 May 17 16:18 result.tar.gz
[2025-05-17 16:18:13] -rw-r--r--. 1 boincer umatlas     11429 May 17 16:18 runtime_log.err
[2025-05-17 16:18:13] -rw-------. 1 boincer umatlas       658 May 17 16:18 goWNDm6RqY7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4JFKDmyAJgRn.diag
[2025-05-17 16:18:13] -rw-r--r--. 1 boincer umatlas     20962 May 17 16:18 stderr.txt
[2025-05-17 16:18:13] HITS file was successfully produced:
[2025-05-17 16:18:14] -rw-------. 1 boincer umatlas 199265330 May 17 16:17 shared/HITS.pool.root.1
[2025-05-17 16:18:14]  *** Contents of shared directory: ***
[2025-05-17 16:18:14] total 412560
[2025-05-17 16:18:14] -rw-r--r--. 2 boincer umatlas 221321875 May 17 13:18 ATLAS.root_0
[2025-05-17 16:18:14] -rw-r--r--. 2 boincer umatlas     17569 May 17 13:18 start_atlas.sh
[2025-05-17 16:18:14] -rw-r--r--. 2 boincer umatlas    508865 May 17 13:18 input.tar.gz
[2025-05-17 16:18:14] -rw-------. 1 boincer umatlas 199265330 May 17 16:17 HITS.pool.root.1
[2025-05-17 16:18:14] -rw-------. 1 boincer umatlas   1331200 May 17 16:18 result.tar.gz
16:18:15 (3077871): run_atlas exited; CPU time 54404.857587
16:18:15 (3077871): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN