Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:05:28 (15368): wrapper (7.7.26015): starting
06:05:28 (15368): wrapper: running run_atlas (--nthreads 8)
[2025-05-18 06:05:28] Arguments: --nthreads 8
[2025-05-18 06:05:28] Threads: 8
[2025-05-18 06:05:28] Checking for CVMFS
[2025-05-18 06:05:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-18 06:05:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-18 06:05:29] Running cvmfs_config stat atlas.cern.ch
[2025-05-18 06:05:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-18 06:05:30] 2.11.2.0 4026 8422 98560 146123 0 60 22235045 25165824 4251 130560 0 6845431 99.692 7957878 1130 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-18 06:05:30] CVMFS is ok
[2025-05-18 06:05:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-18 06:05:30] Checking for apptainer binary...
[2025-05-18 06:05:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-18 06:05:30] Running /usr/bin/apptainer --version
[2025-05-18 06:05:30] apptainer version 1.3.2-1.el7
[2025-05-18 06:05:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-18 06:35:55] cg-vwn218.simple-grid.lan
[2025-05-18 06:35:55] apptainer works
[2025-05-18 06:35:55] Set ATHENA_PROC_NUMBER=8
[2025-05-18 06:35:55] Set ATHENA_CORE_NUMBER=8
[2025-05-18 06:35:55] Starting ATLAS job with PandaID=6655467697
[2025-05-18 06:35:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/26 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-18 12:45:09]  *** The last 200 lines of the pilot log: ***
[2025-05-18 12:45:09] 2025-05-18 09:59:38,300 | INFO     | mean y: 2427804.00990099
[2025-05-18 12:45:09] 2025-05-18 09:59:38,300 | INFO     | -- intersect: -43221988684.66735
[2025-05-18 12:45:09] 2025-05-18 09:59:38,301 | INFO     | intersect: -43221988684.66735
[2025-05-18 12:45:09] 2025-05-18 09:59:38,301 | INFO     | chi2: 8.425650163012405
[2025-05-18 12:45:09] 2025-05-18 09:59:38,301 | INFO     | current chi2=8.425650163012405 (change=7.835923432130601 %)
[2025-05-18 12:45:09] 2025-05-18 09:59:38,301 | INFO     | right removable region: 302
[2025-05-18 12:45:09] 2025-05-18 09:59:38,302 | INFO     | sum of square deviations: 8625843592.0
[2025-05-18 12:45:09] 2025-05-18 09:59:38,305 | INFO     | sum of deviations: 93682693399.0
[2025-05-18 12:45:09] 2025-05-18 09:59:38,305 | INFO     | mean x: 1747553118.0
[2025-05-18 12:45:09] 2025-05-18 09:59:38,305 | INFO     | mean y: 2458021.597359736
[2025-05-18 12:45:09] 2025-05-18 09:59:38,305 | INFO     | -- intersect: -18977190891.106976
[2025-05-18 12:45:09] 2025-05-18 09:59:38,305 | INFO     | intersect: -18977190891.106976
[2025-05-18 12:45:09] 2025-05-18 09:59:38,306 | INFO     | chi2: 4.527452786820364
[2025-05-18 12:45:09] 2025-05-18 09:59:38,306 | INFO     | current chi2=4.527452786820364 (change=50.47640274293793 %)
[2025-05-18 12:45:09] 2025-05-18 09:59:38,306 | INFO     | sum of square deviations: 8205826414.5
[2025-05-18 12:45:09] 2025-05-18 09:59:38,309 | INFO     | sum of deviations: 25283016602.000027
[2025-05-18 12:45:09] 2025-05-18 09:59:38,309 | INFO     | mean x: 1747553270.5
[2025-05-18 12:45:09] 2025-05-18 09:59:38,310 | INFO     | mean y: 2482827.0201342283
[2025-05-18 12:45:09] 2025-05-18 09:59:38,310 | INFO     | -- intersect: -5381913103.273639
[2025-05-18 12:45:09] 2025-05-18 09:59:38,310 | INFO     | intersect: -5381913103.273639
[2025-05-18 12:45:09] 2025-05-18 09:59:38,310 | INFO     | chi2: 2.5626307751529254
[2025-05-18 12:45:09] 2025-05-18 09:59:38,310 | INFO     | current chi2=2.5626307751529254 (change=43.397956956881615 %)
[2025-05-18 12:45:09] 2025-05-18 09:59:38,311 | INFO     | sum of square deviations: 7799669962.0
[2025-05-18 12:45:09] 2025-05-18 09:59:38,313 | INFO     | sum of deviations: -30050339171.00002
[2025-05-18 12:45:09] 2025-05-18 09:59:38,314 | INFO     | mean x: 1747553423.0
[2025-05-18 12:45:09] 2025-05-18 09:59:38,314 | INFO     | mean y: 2503603.624573379
[2025-05-18 12:45:09] 2025-05-18 09:59:38,314 | INFO     | -- intersect: 6735426065.27271
[2025-05-18 12:45:09] 2025-05-18 09:59:38,314 | INFO     | intersect: 6735426065.27271
[2025-05-18 12:45:09] 2025-05-18 09:59:38,314 | INFO     | chi2: 1.2997507299310507
[2025-05-18 12:45:09] 2025-05-18 09:59:38,315 | INFO     | current chi2=1.2997507299310507 (change=49.28060871923744 %)
[2025-05-18 12:45:09] 2025-05-18 09:59:38,315 | INFO     | sum of square deviations: 7407141672.0
[2025-05-18 12:45:09] 2025-05-18 09:59:38,318 | INFO     | sum of deviations: -51522539311.999954
[2025-05-18 12:45:09] 2025-05-18 09:59:38,318 | INFO     | mean x: 1747553575.5
[2025-05-18 12:45:09] 2025-05-18 09:59:38,319 | INFO     | mean y: 2511884.7291666665
[2025-05-18 12:45:09] 2025-05-18 09:59:38,319 | INFO     | -- intersect: 12158131660.962444
[2025-05-18 12:45:09] 2025-05-18 09:59:38,319 | INFO     | intersect: 12158131660.962444
[2025-05-18 12:45:09] 2025-05-18 09:59:38,319 | INFO     | chi2: 0.9662223887014096
[2025-05-18 12:45:09] 2025-05-18 09:59:38,319 | INFO     | current chi2=0.9662223887014096 (change=25.660946637616743 %)
[2025-05-18 12:45:09] 2025-05-18 09:59:38,320 | INFO     | sum of square deviations: 7028008982.0
[2025-05-18 12:45:09] 2025-05-18 09:59:38,323 | INFO     | sum of deviations: -45686616241.999985
[2025-05-18 12:45:09] 2025-05-18 09:59:38,323 | INFO     | mean x: 1747553728.0
[2025-05-18 12:45:09] 2025-05-18 09:59:38,323 | INFO     | mean y: 2509521.7526501766
[2025-05-18 12:45:09] 2025-05-18 09:59:38,323 | INFO     | -- intersect: 11362742090.876652
[2025-05-18 12:45:09] 2025-05-18 09:59:38,323 | INFO     | intersect: 11362742090.876652
[2025-05-18 12:45:09] 2025-05-18 09:59:38,324 | INFO     | chi2: 0.9505918687417034
[2025-05-18 12:45:09] 2025-05-18 09:59:38,324 | INFO     | current chi2=0.9505918687417034 (change=1.6176938293381329 %)
[2025-05-18 12:45:09] 2025-05-18 09:59:38,324 | INFO     | left removable region: 50
[2025-05-18 12:45:09] 2025-05-18 09:59:38,325 | INFO     | sum of square deviations: 4962187923.0
[2025-05-18 12:45:09] 2025-05-18 09:59:38,327 | INFO     | sum of deviations: 9220600851.0
[2025-05-18 12:45:09] 2025-05-18 09:59:38,327 | INFO     | mean x: 1747554307.5
[2025-05-18 12:45:09] 2025-05-18 09:59:38,327 | INFO     | mean y: 2501298.3174603176
[2025-05-18 12:45:09] 2025-05-18 09:59:38,327 | INFO     | -- intersect: -3244755956.938089
[2025-05-18 12:45:09] 2025-05-18 09:59:38,327 | INFO     | intersect: -3244755956.938089
[2025-05-18 12:45:09] 2025-05-18 09:59:38,328 | INFO     | chi2: 0.0001475160715060659
[2025-05-18 12:45:09] 2025-05-18 09:59:38,328 | INFO     | -- intersect: -3244755956.938089
[2025-05-18 12:45:09] 2025-05-18 09:59:38,328 | INFO     | current memory leak: 1.86 B/s (using 252 data points, chi2=0.00)
[2025-05-18 12:45:09] 2025-05-18 09:59:38,329 | INFO     | ..............................
[2025-05-18 12:45:09] 2025-05-18 09:59:38,329 | INFO     | . Timing measurements:
[2025-05-18 12:45:09] 2025-05-18 09:59:38,330 | INFO     | . get job = 0 s
[2025-05-18 12:45:09] 2025-05-18 09:59:38,330 | INFO     | . initial setup = 5 s
[2025-05-18 12:45:09] 2025-05-18 09:59:38,330 | INFO     | . payload setup = 120 s
[2025-05-18 12:45:09] 2025-05-18 09:59:38,330 | INFO     | . stage-in = 0 s
[2025-05-18 12:45:09] 2025-05-18 09:59:38,330 | INFO     | . payload execution = 18882 s
[2025-05-18 12:45:09] 2025-05-18 09:59:38,330 | INFO     | . stage-out = 2 s
[2025-05-18 12:45:09] 2025-05-18 09:59:38,330 | INFO     | . log creation = 0 s
[2025-05-18 12:45:09] 2025-05-18 09:59:38,330 | INFO     | ..............................
[2025-05-18 12:45:09] 2025-05-18 09:59:38,743 | INFO     | 
[2025-05-18 12:45:09] 2025-05-18 09:59:38,743 | INFO     | job summary report
[2025-05-18 12:45:09] 2025-05-18 09:59:38,743 | INFO     | --------------------------------------------------
[2025-05-18 12:45:09] 2025-05-18 09:59:38,743 | INFO     | PanDA job id: 6655467697
[2025-05-18 12:45:09] 2025-05-18 09:59:38,743 | INFO     | task id: 44638099
[2025-05-18 12:45:09] 2025-05-18 09:59:38,743 | INFO     | errors: (none)
[2025-05-18 12:45:09] 2025-05-18 09:59:38,744 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-18 12:45:09] 2025-05-18 09:59:38,744 | INFO     | pilot state: finished 
[2025-05-18 12:45:09] 2025-05-18 09:59:38,744 | INFO     | transexitcode: 0
[2025-05-18 12:45:09] 2025-05-18 09:59:38,744 | INFO     | exeerrorcode: 0
[2025-05-18 12:45:09] 2025-05-18 09:59:38,744 | INFO     | exeerrordiag: 
[2025-05-18 12:45:09] 2025-05-18 09:59:38,744 | INFO     | exitcode: 0
[2025-05-18 12:45:09] 2025-05-18 09:59:38,744 | INFO     | exitmsg: OK
[2025-05-18 12:45:09] 2025-05-18 09:59:38,744 | INFO     | cpuconsumptiontime: 68545 s
[2025-05-18 12:45:09] 2025-05-18 09:59:38,744 | INFO     | nevents: 400
[2025-05-18 12:45:09] 2025-05-18 09:59:38,744 | INFO     | neventsw: 0
[2025-05-18 12:45:09] 2025-05-18 09:59:38,744 | INFO     | pid: 13847
[2025-05-18 12:45:09] 2025-05-18 09:59:38,745 | INFO     | pgrp: 13847
[2025-05-18 12:45:09] 2025-05-18 09:59:38,745 | INFO     | corecount: 8
[2025-05-18 12:45:09] 2025-05-18 09:59:38,745 | INFO     | event service: False
[2025-05-18 12:45:09] 2025-05-18 09:59:38,745 | INFO     | sizes: {0: 2393480, 1: 2393735, 2: 2393735, 12: 2393763, 23: 2393791, 34: 2393819, 45: 2393975, 55: 2394003, 66: 2394031, 77: 2394059, 84: 2394321, 88: 2394629, 19
[2025-05-18 12:45:09] 2025-05-18 09:59:38,745 | INFO     | --------------------------------------------------
[2025-05-18 12:45:09] 2025-05-18 09:59:38,745 | INFO     | 
[2025-05-18 12:45:09] 2025-05-18 09:59:38,745 | INFO     | executing command: ls -lF /var/lib/boinc/slots/26
[2025-05-18 12:45:09] 2025-05-18 09:59:39,168 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-18 12:45:09] 2025-05-18 09:59:39,169 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-18 12:45:09] 2025-05-18 09:59:39,169 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-18 12:45:09] 2025-05-18 09:59:39,169 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-18 12:45:09] 2025-05-18 09:59:39,169 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-18 12:45:09] 2025-05-18 09:59:39,169 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-18 12:45:09] 2025-05-18 09:59:39,169 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-18 12:45:09] 2025-05-18 09:59:39,169 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-18 12:45:09] 2025-05-18 09:59:39,169 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-18 12:45:09] 2025-05-18 09:59:39,170 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-18 12:45:09] 2025-05-18 09:59:39,170 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-18 12:45:09] 2025-05-18 09:59:39,170 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-18 12:45:09] 2025-05-18 09:59:39,170 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-18 12:45:09] 2025-05-18 09:59:39,170 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-18 12:45:09] 2025-05-18 09:59:39,170 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-18 12:45:09] 2025-05-18 09:59:39,170 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-18 12:45:09] 2025-05-18 09:59:39,170 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-18 12:45:09] 2025-05-18 09:59:39,170 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-18 12:45:09] 2025-05-18 09:59:39,170 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-18 12:45:09] 2025-05-18 09:59:39,170 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-18 12:45:09] 2025-05-18 09:59:39,171 | INFO     | job 6655467697 has completed (purged errors)
[2025-05-18 12:45:09] 2025-05-18 09:59:39,171 | INFO     | overall cleanup function is called
[2025-05-18 12:45:09] 2025-05-18 09:59:40,180 | INFO     | --- collectZombieJob: --- 10, [13847]
[2025-05-18 12:45:09] 2025-05-18 09:59:40,180 | INFO     | zombie collector waiting for pid 13847
[2025-05-18 12:45:09] 2025-05-18 09:59:40,180 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-18 12:45:09] 2025-05-18 09:59:40,180 | INFO     | collected zombie processes
[2025-05-18 12:45:09] 2025-05-18 09:59:40,181 | INFO     | will attempt to kill all subprocesses of pid=13847
[2025-05-18 12:45:09] 2025-05-18 09:59:40,332 | INFO     | process IDs to be killed: [13847] (in reverse order)
[2025-05-18 12:45:09] 2025-05-18 09:59:40,403 | WARNING  | found no corresponding commands to process id(s)
[2025-05-18 12:45:09] 2025-05-18 09:59:40,404 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-18 12:45:09] 2025-05-18 09:59:40,408 | INFO     | did not find any defunct processes belonging to 13847
[2025-05-18 12:45:09] 2025-05-18 09:59:40,412 | INFO     | did not find any defunct processes belonging to 13847
[2025-05-18 12:45:09] 2025-05-18 09:59:40,412 | INFO     | ready for new job
[2025-05-18 12:45:09] 2025-05-18 09:59:40,412 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-18 12:45:09] 2025-05-18 09:59:40,415 | INFO     | **************************************
[2025-05-18 12:45:09] 2025-05-18 09:59:40,415 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-18 12:45:09] 2025-05-18 09:59:40,415 | INFO     | **************************************
[2025-05-18 12:45:09] 2025-05-18 09:59:40,415 | INFO     | 
[2025-05-18 12:45:09] 2025-05-18 09:59:40,416 | INFO     | pilot is running in a VM
[2025-05-18 12:45:09] 2025-05-18 09:59:40,416 | INFO     | architecture information:
[2025-05-18 12:45:09] 2025-05-18 09:59:40,416 | INFO     | executing command: cat /etc/os-release
[2025-05-18 12:45:09] 2025-05-18 09:59:40,440 | INFO     | cat /etc/os-release:
[2025-05-18 12:45:09] NAME="CentOS Linux"
[2025-05-18 12:45:09] VERSION="7 (Core)"
[2025-05-18 12:45:09] ID="centos"
[2025-05-18 12:45:09] ID_LIKE="rhel fedora"
[2025-05-18 12:45:09] VERSION_ID="7"
[2025-05-18 12:45:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-18 12:45:09] ANSI_COLOR="0;31"
[2025-05-18 12:45:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-18 12:45:09] HOME_URL="https://www.centos.org/"
[2025-05-18 12:45:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-18 12:45:09] 
[2025-05-18 12:45:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-18 12:45:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-18 12:45:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-18 12:45:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-18 12:45:09] 
[2025-05-18 12:45:09] 2025-05-18 09:59:40,441 | INFO     | **************************************
[2025-05-18 12:45:09] 2025-05-18 09:59:40,947 | INFO     | executing command: df -mP /var/lib/boinc/slots/26
[2025-05-18 12:45:09] 2025-05-18 09:59:41,108 | INFO     | sufficient remaining disk space (497037606912 B)
[2025-05-18 12:45:09] 2025-05-18 09:59:41,108 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-18 12:45:09] 2025-05-18 09:59:41,108 | INFO     | current server update state: UPDATING_FINAL
[2025-05-18 12:45:09] 2025-05-18 09:59:41,108 | INFO     | update_server=False
[2025-05-18 12:45:09] 2025-05-18 09:59:41,109 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-18 12:45:09] 2025-05-18 09:59:41,112 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-18 12:45:09] 2025-05-18 09:59:41,112 | INFO     | aborting loop
[2025-05-18 12:45:09] 2025-05-18 09:59:41,113 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-18 12:45:09] 2025-05-18 09:59:41,113 | INFO     | found 0 job(s) in 20 queues
[2025-05-18 12:45:09] 2025-05-18 09:59:41,114 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-18 12:45:09] 2025-05-18 09:59:41,114 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-18 12:45:09] 2025-05-18 09:59:41,205 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-18 12:45:09] 2025-05-18 09:59:41,292 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-18 12:45:09] 2025-05-18 09:59:41,447 | INFO     | all payload control threads have been joined
[2025-05-18 12:45:09] 2025-05-18 09:59:41,728 | INFO     | all data control threads have been joined
[2025-05-18 12:45:09] 2025-05-18 09:59:42,115 | INFO     | [job] retrieve thread has finished
[2025-05-18 12:45:09] 2025-05-18 09:59:42,118 | INFO     | [job] job monitor thread has finished
[2025-05-18 12:45:09] 2025-05-18 09:59:42,151 | INFO     | [job] create_data_payload thread has finished
[2025-05-18 12:45:09] 2025-05-18 09:59:42,281 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-18 12:45:09] 2025-05-18 09:59:42,453 | INFO     | [payload] control thread has finished
[2025-05-18 12:45:09] 2025-05-18 09:59:42,570 | INFO     | [payload] validate_pre thread has finished
[2025-05-18 12:45:09] 2025-05-18 09:59:42,600 | INFO     | [payload] validate_post thread has finished
[2025-05-18 12:45:09] 2025-05-18 09:59:42,650 | INFO     | all job control threads have been joined
[2025-05-18 12:45:09] 2025-05-18 09:59:42,734 | INFO     | [data] control thread has finished
[2025-05-18 12:45:09] 2025-05-18 09:59:42,941 | INFO     | [data] copytool_in thread has finished
[2025-05-18 12:45:09] 2025-05-18 09:59:43,108 | INFO     | [payload] execute_payloads thread has finished
[2025-05-18 12:45:09] 2025-05-18 09:59:43,167 | INFO     | [job] validate thread has finished
[2025-05-18 12:45:09] 2025-05-18 09:59:43,212 | INFO     | [data] copytool_out thread has finished
[2025-05-18 12:45:09] 2025-05-18 09:59:43,513 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-18 12:45:09] 2025-05-18 09:59:43,572 | INFO     | [payload] failed_post thread has finished
[2025-05-18 12:45:09] 2025-05-18 09:59:43,656 | INFO     | [job] control thread has finished
[2025-05-18 12:45:09] 2025-05-18 09:59:44,519 | INFO     | [job] queue monitor thread has finished
[2025-05-18 12:45:09] 2025-05-18 09:59:45,304 | INFO     | [data] queue_monitor thread has finished
[2025-05-18 12:45:09] 2025-05-18 09:59:46,307 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140636243904320)>', '<ExcThread(monitor, started 140635667420928)>']
[2025-05-18 12:45:09] 2025-05-18 09:59:47,149 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-18 12:45:09] 2025-05-18 09:59:47,149 | INFO     | [monitor] control thread has ended
[2025-05-18 12:45:09] 2025-05-18 09:59:51,332 | INFO     | all workflow threads have been joined
[2025-05-18 12:45:09] 2025-05-18 09:59:51,332 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-18 12:45:09] 2025-05-18 09:59:51,332 | INFO     | traces error code: 0
[2025-05-18 12:45:09] 2025-05-18 09:59:51,333 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-18 12:45:09] 2025-05-18 09:59:51,683 [wrapper] ==== pilot stdout END ====
[2025-05-18 12:45:09] 2025-05-18 09:59:51,742 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-18 12:45:09] 2025-05-18 09:59:51,821 [wrapper] pilotpid: 3256
[2025-05-18 12:45:09] 2025-05-18 09:59:51,899 [wrapper] Pilot exit status: 0
[2025-05-18 12:45:09] 2025-05-18 09:59:52,232 [wrapper] pandaids: 6655467697
[2025-05-18 12:45:09] 2025-05-18 09:59:53,097 [wrapper] cleanup supervisor_pilot  2064 3257
[2025-05-18 12:45:09] 2025-05-18 09:59:53,195 [wrapper] Test setup, not cleaning
[2025-05-18 12:45:09] 2025-05-18 09:59:53,285 [wrapper] apfmon messages muted
[2025-05-18 12:45:09] 2025-05-18 09:59:53,346 [wrapper] ==== wrapper stdout END ====
[2025-05-18 12:45:09] 2025-05-18 09:59:53,441 [wrapper] ==== wrapper stderr END ====
[2025-05-18 12:45:09]  *** Error codes and diagnostics ***
[2025-05-18 12:45:09]     "exeErrorCode": 0,
[2025-05-18 12:45:09]     "exeErrorDiag": "",
[2025-05-18 12:45:09]     "pilotErrorCode": 0,
[2025-05-18 12:45:09]     "pilotErrorDiag": "",
[2025-05-18 12:45:09]  *** Listing of results directory ***
[2025-05-18 12:45:09] total 419128
[2025-05-18 12:45:09] -rw-r--r--. 1 boinc boinc    495897 May 17 16:09 pilot3.tar.gz
[2025-05-18 12:45:09] -rw-r--r--. 1 boinc boinc      5111 May 17 16:11 queuedata.json
[2025-05-18 12:45:09] -rwx------. 1 boinc boinc     37140 May 17 16:12 runpilot2-wrapper.sh
[2025-05-18 12:45:09] -rw-r--r--. 1 boinc boinc       100 May 18 06:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-18 12:45:09] -rwxr-xr-x. 1 boinc boinc      7986 May 18 06:05 run_atlas
[2025-05-18 12:45:09] -rw-r--r--. 1 boinc boinc       105 May 18 06:05 job.xml
[2025-05-18 12:45:09] -rw-r--r--. 1 boinc boinc      6373 May 18 06:05 init_data.xml
[2025-05-18 12:45:09] -rw-r--r--. 2 boinc boinc 221180471 May 18 06:05 EVNT.44638096._000553.pool.root.1
[2025-05-18 12:45:09] -rw-r--r--. 2 boinc boinc     17569 May 18 06:05 start_atlas.sh
[2025-05-18 12:45:09] drwxrwx--x. 2 boinc boinc        68 May 18 06:05 shared
[2025-05-18 12:45:09] -rw-r--r--. 2 boinc boinc    508883 May 18 06:05 input.tar.gz
[2025-05-18 12:45:09] -rw-r--r--. 1 boinc boinc         0 May 18 06:05 boinc_lockfile
[2025-05-18 12:45:09] -rw-r--r--. 1 boinc boinc      2536 May 18 06:35 pandaJob.out
[2025-05-18 12:45:09] -rw-------. 1 boinc boinc       424 May 18 06:36 setup.sh.local
[2025-05-18 12:45:09] -rw-------. 1 boinc boinc    994627 May 18 06:39 agis_schedconf.cvmfs.json
[2025-05-18 12:45:09] drwx------. 4 boinc boinc      4096 May 18 06:39 pilot3
[2025-05-18 12:45:09] -rw-------. 1 boinc boinc 200036489 May 18 11:58 HITS.44638099._056896.pool.root.1
[2025-05-18 12:45:09] -rw-r--r--. 1 boinc boinc       531 May 18 11:58 boinc_task_state.xml
[2025-05-18 12:45:09] -rw-------. 1 boinc boinc        95 May 18 11:58 pilot_heartbeat.json
[2025-05-18 12:45:09] -rw-------. 1 boinc boinc      1018 May 18 11:59 memory_monitor_summary.json
[2025-05-18 12:45:09] -rw-------. 1 boinc boinc   1596741 May 18 11:59 agis_ddmendpoints.agis.ALL.json
[2025-05-18 12:45:09] -rw-------. 1 boinc boinc    424894 May 18 11:59 log.44638099._056896.job.log.tgz.1
[2025-05-18 12:45:09] -rw-------. 1 boinc boinc      7687 May 18 11:59 heartbeat.json
[2025-05-18 12:45:09] -rw-------. 1 boinc boinc      4540 May 18 11:59 pilotlog.txt
[2025-05-18 12:45:09] -rw-------. 1 boinc boinc   1643812 May 18 11:59 log.44638099._056896.job.log.1
[2025-05-18 12:45:09] -rw-------. 1 boinc boinc       357 May 18 11:59 output.list
[2025-05-18 12:45:09] -rw-r--r--. 1 boinc boinc       620 May 18 11:59 runtime_log
[2025-05-18 12:45:09] -rw-------. 1 boinc boinc   2088960 May 18 11:59 result.tar.gz
[2025-05-18 12:45:09] -rw-------. 1 boinc boinc       657 May 18 11:59 Vr1NDmXSXa7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjiOKDmufXwyn.diag
[2025-05-18 12:45:09] -rw-r--r--. 1 boinc boinc     11031 May 18 11:59 runtime_log.err
[2025-05-18 12:45:09] -rw-r--r--. 1 boinc boinc      8192 May 18 12:45 boinc_mmap_file
[2025-05-18 12:45:09] -rw-r--r--. 1 boinc boinc        28 May 18 12:45 wrapper_checkpoint.txt
[2025-05-18 12:45:09] -rw-r--r--. 1 boinc boinc     20510 May 18 12:45 stderr.txt
[2025-05-18 12:45:09] HITS file was successfully produced:
[2025-05-18 12:45:09] -rw-------. 1 boinc boinc 200036489 May 18 11:58 shared/HITS.pool.root.1
[2025-05-18 12:45:09]  *** Contents of shared directory: ***
[2025-05-18 12:45:09] total 413912
[2025-05-18 12:45:09] -rw-r--r--. 2 boinc boinc 221180471 May 18 06:05 ATLAS.root_0
[2025-05-18 12:45:09] -rw-r--r--. 2 boinc boinc     17569 May 18 06:05 start_atlas.sh
[2025-05-18 12:45:09] -rw-r--r--. 2 boinc boinc    508883 May 18 06:05 input.tar.gz
[2025-05-18 12:45:09] -rw-------. 1 boinc boinc 200036489 May 18 11:58 HITS.pool.root.1
[2025-05-18 12:45:09] -rw-------. 1 boinc boinc   2088960 May 18 11:59 result.tar.gz
12:45:11 (15368): run_atlas exited; CPU time 68811.674245
12:45:11 (15368): called boinc_finish(0)

</stderr_txt>
]]>

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