Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:08:14 (4164011): wrapper (7.7.26015): starting
13:08:14 (4164011): wrapper: running run_atlas (--nthreads 8)
[2025-05-17 13:08:14] Arguments: --nthreads 8
[2025-05-17 13:08:14] Threads: 8
[2025-05-17 13:08:14] Checking for CVMFS
[2025-05-17 13:08:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 13:08:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 13:08:15] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 13:08:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 13:08:16] 2.12.6.0 8763 7147 325160 146107 0 906 30317140 32935937 44351 16776704 0 100486086 99.603 101446706 36810 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-17 13:08:16] CVMFS is ok
[2025-05-17 13:08:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-17 13:08:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-17 13:08:16] Further information can be found at the LHC@home message board.
[2025-05-17 13:08:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 13:08:16] Checking for apptainer binary...
[2025-05-17 13:08:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 13:08:16] Running /usr/bin/apptainer --version
[2025-05-17 13:08:16] apptainer version 1.4.0-1.el9
[2025-05-17 13:08:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 13:08:17] c7-9-14.aglt2.org
[2025-05-17 13:08:17] apptainer works
[2025-05-17 13:08:17] Set ATHENA_PROC_NUMBER=8
[2025-05-17 13:08:17] Set ATHENA_CORE_NUMBER=8
[2025-05-17 13:08:17] Starting ATLAS job with PandaID=6655036890
[2025-05-17 13:08:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 14:46:15]  *** The last 200 lines of the pilot log: ***
[2025-05-17 14:46:15] 2025-05-17 18:45:25,435 | INFO     | preparing for final server update for job 6655036890 in state='finished'
[2025-05-17 14:46:15] 2025-05-17 18:45:25,611 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-05-17 14:46:15] 2025-05-17 18:45:25,612 | INFO     | this job has now completed (state=finished)
[2025-05-17 14:46:15] 2025-05-17 18:45:25,612 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-17 14:46:15] 2025-05-17 18:45:25,612 | INFO     | log transfer has been attempted: DONE
[2025-05-17 14:46:15] 2025-05-17 18:45:25,612 | INFO     | job 6655036890 has finished - writing final server update
[2025-05-17 14:46:15] 2025-05-17 18:45:25,612 | INFO     | total number of processed events: 400 (read)
[2025-05-17 14:46:15] 2025-05-17 18:45:25,764 | INFO     | executing command: lscpu
[2025-05-17 14:46:15] 2025-05-17 18:45:26,014 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-17 14:46:15] 2025-05-17 18:45:26,851 | INFO     | PID=24506 has CPU usage=10.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-05-17 14:46:15] 2025-05-17 18:45:26,851 | INFO     | .. there are 81 such processes running
[2025-05-17 14:46:15] 2025-05-17 18:45:27,013 | WARNING  | process 107184 can no longer be monitored (due to stat problems) - aborting
[2025-05-17 14:46:15] 2025-05-17 18:45:27,013 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6655036890/memory_monitor_summary.json (trf name=prmon)
[2025-05-17 14:46:15] 2025-05-17 18:45:29,036 | INFO     | number of running child processes to parent process 107184: 1
[2025-05-17 14:46:15] 2025-05-17 18:45:29,036 | INFO     | maximum number of monitored processes: 6
[2025-05-17 14:46:15] 2025-05-17 18:45:31,541 | INFO     | monitor loop #381: job 0:6655036890 is in state 'finished'
[2025-05-17 14:46:15] 2025-05-17 18:45:31,541 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 14:46:15] 2025-05-17 18:45:34,054 | INFO     | monitor loop #382: job 0:6655036890 is in state 'finished'
[2025-05-17 14:46:15] 2025-05-17 18:45:34,055 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 14:46:15] 2025-05-17 18:45:36,561 | INFO     | monitor loop #383: job 0:6655036890 is in state 'finished'
[2025-05-17 14:46:15] 2025-05-17 18:45:36,562 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 14:46:15] 2025-05-17 18:45:39,077 | INFO     | monitor loop #384: job 0:6655036890 is in state 'finished'
[2025-05-17 14:46:15] 2025-05-17 18:45:39,078 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 14:46:15] 2025-05-17 18:45:41,588 | INFO     | monitor loop #385: job 0:6655036890 is in state 'finished'
[2025-05-17 14:46:15] 2025-05-17 18:45:41,589 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 14:46:15] 2025-05-17 18:45:44,107 | INFO     | monitor loop #386: job 0:6655036890 is in state 'finished'
[2025-05-17 14:46:15] 2025-05-17 18:45:44,108 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 14:46:15] 2025-05-17 18:45:46,615 | INFO     | monitor loop #387: job 0:6655036890 is in state 'finished'
[2025-05-17 14:46:15] 2025-05-17 18:45:46,615 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 14:46:15] 2025-05-17 18:45:49,122 | INFO     | monitor loop #388: job 0:6655036890 is in state 'finished'
[2025-05-17 14:46:15] 2025-05-17 18:45:49,123 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 14:46:15] 2025-05-17 18:45:50,356 | INFO     | PID=24506 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-05-17 14:46:15] 2025-05-17 18:45:50,356 | INFO     | .. there are 81 such processes running
[2025-05-17 14:46:15] 2025-05-17 18:45:51,629 | INFO     | monitor loop #389: job 0:6655036890 is in state 'finished'
[2025-05-17 14:46:15] 2025-05-17 18:45:51,630 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 14:46:15] 2025-05-17 18:45:53,364 | INFO     | 5786s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-05-17 14:46:15] 2025-05-17 18:45:54,134 | INFO     | monitor loop #390: job 0:6655036890 is in state 'finished'
[2025-05-17 14:46:15] 2025-05-17 18:45:54,135 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 14:46:15] 2025-05-17 18:45:56,641 | INFO     | monitor loop #391: job 0:6655036890 is in state 'finished'
[2025-05-17 14:46:15] 2025-05-17 18:45:56,642 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 14:46:15] 2025-05-17 18:45:57,496 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-17 14:46:15] 2025-05-17 18:45:57,496 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6655036890/memory_monitor_summary.json (trf name=prmon)
[2025-05-17 14:46:15] 2025-05-17 18:45:57,496 | INFO     | extracted standard info from prmon json
[2025-05-17 14:46:15] 2025-05-17 18:45:57,497 | INFO     | extracted standard memory fields from prmon json
[2025-05-17 14:46:15] 2025-05-17 18:45:57,497 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-17 14:46:15] 2025-05-17 18:45:57,500 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-17 14:46:15] 2025-05-17 18:45:57,500 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-17 14:46:15] 2025-05-17 18:45:57,501 | INFO     | fitting pss+swap vs Time
[2025-05-17 14:46:15] 2025-05-17 18:45:57,501 | INFO     | sum of square deviations: 190405644.98823565
[2025-05-17 14:46:15] 2025-05-17 18:45:57,502 | INFO     | sum of deviations: 27917756829.85881
[2025-05-17 14:46:15] 2025-05-17 18:45:57,502 | INFO     | mean x: 1747504800.0117648
[2025-05-17 14:46:15] 2025-05-17 18:45:57,502 | INFO     | mean y: 2031017.1411764706
[2025-05-17 14:46:15] 2025-05-17 18:45:57,502 | INFO     | -- intersect: -256221538765.95953
[2025-05-17 14:46:15] 2025-05-17 18:45:57,502 | INFO     | intersect: -256221538765.95953
[2025-05-17 14:46:15] 2025-05-17 18:45:57,502 | INFO     | chi2: 2.5904656493220988
[2025-05-17 14:46:15] 2025-05-17 18:45:57,502 | INFO     | -- intersect: -256221538765.95953
[2025-05-17 14:46:15] 2025-05-17 18:45:57,502 | INFO     | current memory leak: 146.62 B/s (using 85 data points, chi2=2.59)
[2025-05-17 14:46:15] 2025-05-17 18:45:57,502 | INFO     | ..............................
[2025-05-17 14:46:15] 2025-05-17 18:45:57,502 | INFO     | . Timing measurements:
[2025-05-17 14:46:15] 2025-05-17 18:45:57,502 | INFO     | . get job = 0 s
[2025-05-17 14:46:15] 2025-05-17 18:45:57,503 | INFO     | . initial setup = 5 s
[2025-05-17 14:46:15] 2025-05-17 18:45:57,503 | INFO     | . payload setup = 46 s
[2025-05-17 14:46:15] 2025-05-17 18:45:57,503 | INFO     | . stage-in = 0 s
[2025-05-17 14:46:15] 2025-05-17 18:45:57,503 | INFO     | . payload execution = 5617 s
[2025-05-17 14:46:15] 2025-05-17 18:45:57,503 | INFO     | . stage-out = 2 s
[2025-05-17 14:46:15] 2025-05-17 18:45:57,503 | INFO     | . log creation = 0 s
[2025-05-17 14:46:15] 2025-05-17 18:45:57,503 | INFO     | ..............................
[2025-05-17 14:46:15] 2025-05-17 18:45:57,992 | INFO     | 
[2025-05-17 14:46:15] 2025-05-17 18:45:57,993 | INFO     | job summary report
[2025-05-17 14:46:15] 2025-05-17 18:45:57,993 | INFO     | --------------------------------------------------
[2025-05-17 14:46:15] 2025-05-17 18:45:57,993 | INFO     | PanDA job id: 6655036890
[2025-05-17 14:46:15] 2025-05-17 18:45:57,993 | INFO     | task id: 44638099
[2025-05-17 14:46:15] 2025-05-17 18:45:57,993 | INFO     | errors: (none)
[2025-05-17 14:46:15] 2025-05-17 18:45:57,993 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 14:46:15] 2025-05-17 18:45:57,993 | INFO     | pilot state: finished 
[2025-05-17 14:46:15] 2025-05-17 18:45:57,993 | INFO     | transexitcode: 0
[2025-05-17 14:46:15] 2025-05-17 18:45:57,993 | INFO     | exeerrorcode: 0
[2025-05-17 14:46:15] 2025-05-17 18:45:57,993 | INFO     | exeerrordiag: 
[2025-05-17 14:46:15] 2025-05-17 18:45:57,993 | INFO     | exitcode: 0
[2025-05-17 14:46:15] 2025-05-17 18:45:57,993 | INFO     | exitmsg: OK
[2025-05-17 14:46:15] 2025-05-17 18:45:57,993 | INFO     | cpuconsumptiontime: 28183 s
[2025-05-17 14:46:15] 2025-05-17 18:45:57,993 | INFO     | nevents: 400
[2025-05-17 14:46:15] 2025-05-17 18:45:57,993 | INFO     | neventsw: 0
[2025-05-17 14:46:15] 2025-05-17 18:45:57,993 | INFO     | pid: 107184
[2025-05-17 14:46:15] 2025-05-17 18:45:57,993 | INFO     | pgrp: 107184
[2025-05-17 14:46:15] 2025-05-17 18:45:57,993 | INFO     | corecount: 8
[2025-05-17 14:46:15] 2025-05-17 18:45:57,993 | INFO     | event service: False
[2025-05-17 14:46:15] 2025-05-17 18:45:57,993 | INFO     | sizes: {0: 2393433, 1: 2393688, 12: 2393688, 23: 2393716, 34: 2393744, 42: 2393978, 44: 2394162, 5669: 2420653, 5670: 2420652, 5673: 2429649, 5675: 2429705, 5709: 
[2025-05-17 14:46:15] 2025-05-17 18:45:57,993 | INFO     | --------------------------------------------------
[2025-05-17 14:46:15] 2025-05-17 18:45:57,993 | INFO     | 
[2025-05-17 14:46:15] 2025-05-17 18:45:57,993 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-05-17 14:46:15] 2025-05-17 18:45:58,176 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 14:46:15] 2025-05-17 18:45:58,176 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 14:46:15] 2025-05-17 18:45:58,176 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 14:46:15] 2025-05-17 18:45:58,176 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 14:46:15] 2025-05-17 18:45:58,176 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 14:46:15] 2025-05-17 18:45:58,176 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 14:46:15] 2025-05-17 18:45:58,176 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 14:46:15] 2025-05-17 18:45:58,176 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 14:46:15] 2025-05-17 18:45:58,176 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 14:46:15] 2025-05-17 18:45:58,176 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 14:46:15] 2025-05-17 18:45:58,176 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 14:46:15] 2025-05-17 18:45:58,176 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 14:46:15] 2025-05-17 18:45:58,176 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 14:46:15] 2025-05-17 18:45:58,177 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 14:46:15] 2025-05-17 18:45:58,177 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 14:46:15] 2025-05-17 18:45:58,177 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 14:46:15] 2025-05-17 18:45:58,177 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 14:46:15] 2025-05-17 18:45:58,177 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 14:46:15] 2025-05-17 18:45:58,177 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 14:46:15] 2025-05-17 18:45:58,177 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 14:46:15] 2025-05-17 18:45:58,177 | INFO     | job 6655036890 has completed (purged errors)
[2025-05-17 14:46:15] 2025-05-17 18:45:58,177 | INFO     | overall cleanup function is called
[2025-05-17 14:46:15] 2025-05-17 18:45:59,187 | INFO     | --- collectZombieJob: --- 10, [107184]
[2025-05-17 14:46:15] 2025-05-17 18:45:59,188 | INFO     | zombie collector waiting for pid 107184
[2025-05-17 14:46:15] 2025-05-17 18:45:59,188 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 14:46:15] 2025-05-17 18:45:59,188 | INFO     | collected zombie processes
[2025-05-17 14:46:15] 2025-05-17 18:45:59,188 | INFO     | will attempt to kill all subprocesses of pid=107184
[2025-05-17 14:46:15] 2025-05-17 18:46:01,460 | INFO     | process IDs to be killed: [107184] (in reverse order)
[2025-05-17 14:46:15] 2025-05-17 18:46:01,921 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 14:46:15] 2025-05-17 18:46:01,922 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 14:46:15] 2025-05-17 18:46:01,976 | INFO     | did not find any defunct processes belonging to 107184
[2025-05-17 14:46:15] 2025-05-17 18:46:02,050 | INFO     | did not find any defunct processes belonging to 107184
[2025-05-17 14:46:15] 2025-05-17 18:46:02,050 | INFO     | ready for new job
[2025-05-17 14:46:15] 2025-05-17 18:46:02,050 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 14:46:15] 2025-05-17 18:46:02,052 | INFO     | **************************************
[2025-05-17 14:46:15] 2025-05-17 18:46:02,052 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 14:46:15] 2025-05-17 18:46:02,052 | INFO     | **************************************
[2025-05-17 14:46:15] 2025-05-17 18:46:02,052 | INFO     | 
[2025-05-17 14:46:15] 2025-05-17 18:46:02,084 | INFO     | architecture information:
[2025-05-17 14:46:15] 2025-05-17 18:46:02,087 | INFO     | executing command: cat /etc/os-release
[2025-05-17 14:46:15] 2025-05-17 18:46:02,180 | INFO     | cat /etc/os-release:
[2025-05-17 14:46:15] NAME="CentOS Linux"
[2025-05-17 14:46:15] VERSION="7 (Core)"
[2025-05-17 14:46:15] ID="centos"
[2025-05-17 14:46:15] ID_LIKE="rhel fedora"
[2025-05-17 14:46:15] VERSION_ID="7"
[2025-05-17 14:46:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 14:46:15] ANSI_COLOR="0;31"
[2025-05-17 14:46:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 14:46:15] HOME_URL="https://www.centos.org/"
[2025-05-17 14:46:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 14:46:15] 
[2025-05-17 14:46:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 14:46:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 14:46:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 14:46:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 14:46:15] 
[2025-05-17 14:46:15] 2025-05-17 18:46:02,181 | INFO     | **************************************
[2025-05-17 14:46:15] 2025-05-17 18:46:02,684 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-05-17 14:46:15] 2025-05-17 18:46:02,786 | INFO     | sufficient remaining disk space (72842477568 B)
[2025-05-17 14:46:15] 2025-05-17 18:46:02,786 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 14:46:15] 2025-05-17 18:46:02,786 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 14:46:15] 2025-05-17 18:46:02,786 | INFO     | update_server=False
[2025-05-17 14:46:15] 2025-05-17 18:46:02,786 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 14:46:15] 2025-05-17 18:46:02,786 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 14:46:15] 2025-05-17 18:46:02,787 | INFO     | aborting loop
[2025-05-17 14:46:15] 2025-05-17 18:46:02,790 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 14:46:15] 2025-05-17 18:46:02,795 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-17 14:46:15] 2025-05-17 18:46:02,796 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 14:46:15] 2025-05-17 18:46:02,796 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 14:46:15] 2025-05-17 18:46:02,796 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 14:46:15] 2025-05-17 18:46:02,851 | INFO     | all data control threads have been joined
[2025-05-17 14:46:15] 2025-05-17 18:46:03,035 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 14:46:15] 2025-05-17 18:46:03,109 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 14:46:15] 2025-05-17 18:46:03,263 | INFO     | all job control threads have been joined
[2025-05-17 14:46:15] 2025-05-17 18:46:03,792 | INFO     | [job] retrieve thread has finished
[2025-05-17 14:46:15] 2025-05-17 18:46:03,792 | INFO     | [job] job monitor thread has finished
[2025-05-17 14:46:15] 2025-05-17 18:46:03,835 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 14:46:15] 2025-05-17 18:46:03,847 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 14:46:15] 2025-05-17 18:46:03,862 | INFO     | [data] control thread has finished
[2025-05-17 14:46:15] 2025-05-17 18:46:03,917 | INFO     | [payload] failed_post thread has finished
[2025-05-17 14:46:15] 2025-05-17 18:46:03,924 | INFO     | [payload] validate_post thread has finished
[2025-05-17 14:46:15] 2025-05-17 18:46:04,125 | INFO     | [job] queue monitor thread has finished
[2025-05-17 14:46:15] 2025-05-17 18:46:04,270 | INFO     | [job] control thread has finished
[2025-05-17 14:46:15] 2025-05-17 18:46:04,299 | INFO     | all payload control threads have been joined
[2025-05-17 14:46:15] 2025-05-17 18:46:04,454 | INFO     | [data] copytool_in thread has finished
[2025-05-17 14:46:15] 2025-05-17 18:46:04,454 | INFO     | [job] validate thread has finished
[2025-05-17 14:46:15] 2025-05-17 18:46:04,662 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 14:46:15] 2025-05-17 18:46:04,783 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 14:46:15] 2025-05-17 18:46:05,041 | INFO     | [data] copytool_out thread has finished
[2025-05-17 14:46:15] 2025-05-17 18:46:05,312 | INFO     | [payload] control thread has finished
[2025-05-17 14:46:15] 2025-05-17 18:46:06,799 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 14:46:15] 2025-05-17 18:46:08,820 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139913006815040)>', '<ExcThread(monitor, started 139912384870144)>']
[2025-05-17 14:46:15] 2025-05-17 18:46:08,850 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 14:46:15] 2025-05-17 18:46:08,851 | INFO     | [monitor] control thread has ended
[2025-05-17 14:46:15] 2025-05-17 18:46:13,846 | INFO     | all workflow threads have been joined
[2025-05-17 14:46:15] 2025-05-17 18:46:13,847 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 14:46:15] 2025-05-17 18:46:13,847 | INFO     | traces error code: 0
[2025-05-17 14:46:15] 2025-05-17 18:46:13,847 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 14:46:15] 2025-05-17 18:46:14,311 [wrapper] ==== pilot stdout END ====
[2025-05-17 14:46:15] 2025-05-17 18:46:14,360 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 14:46:15] 2025-05-17 18:46:14,402 [wrapper] pilotpid: 24506
[2025-05-17 14:46:15] 2025-05-17 18:46:14,443 [wrapper] Pilot exit status: 0
[2025-05-17 14:46:15] 2025-05-17 18:46:14,536 [wrapper] pandaids: 6655036890
[2025-05-17 14:46:15] 2025-05-17 18:46:14,777 [wrapper] cleanup supervisor_pilot 2343474 24507
[2025-05-17 14:46:15] 2025-05-17 18:46:14,787 [wrapper] Test setup, not cleaning
[2025-05-17 14:46:15] 2025-05-17 18:46:14,812 [wrapper] apfmon messages muted
[2025-05-17 14:46:15] 2025-05-17 18:46:14,829 [wrapper] ==== wrapper stdout END ====
[2025-05-17 14:46:15] 2025-05-17 18:46:14,873 [wrapper] ==== wrapper stderr END ====
[2025-05-17 14:46:15]  *** Error codes and diagnostics ***
[2025-05-17 14:46:15]     "exeErrorCode": 0,
[2025-05-17 14:46:15]     "exeErrorDiag": "",
[2025-05-17 14:46:15]     "pilotErrorCode": 0,
[2025-05-17 14:46:15]     "pilotErrorDiag": "",
[2025-05-17 14:46:15]  *** Listing of results directory ***
[2025-05-17 14:46:15] total 414824
[2025-05-17 14:46:15] -rw-r--r--. 1 boincer umatlas    495897 May 17 09:42 pilot3.tar.gz
[2025-05-17 14:46:15] -rwx------. 1 boincer umatlas     37140 May 17 10:03 runpilot2-wrapper.sh
[2025-05-17 14:46:15] -rw-r--r--. 1 boincer umatlas      5111 May 17 10:03 queuedata.json
[2025-05-17 14:46:15] -rw-r--r--. 1 boincer umatlas       100 May 17 13:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 14:46:15] -rwxr-xr-x. 1 boincer umatlas      7986 May 17 13:08 run_atlas
[2025-05-17 14:46:15] -rw-r--r--. 1 boincer umatlas       105 May 17 13:08 job.xml
[2025-05-17 14:46:15] -rw-r--r--. 2 boincer umatlas 219586562 May 17 13:08 EVNT.44638096._000487.pool.root.1
[2025-05-17 14:46:15] -rw-r--r--. 2 boincer umatlas     17569 May 17 13:08 start_atlas.sh
[2025-05-17 14:46:15] drwxrwx--x. 2 boincer umatlas      4096 May 17 13:08 shared
[2025-05-17 14:46:15] -rw-r--r--. 2 boincer umatlas    508879 May 17 13:08 input.tar.gz
[2025-05-17 14:46:15] -rw-r--r--. 1 boincer umatlas         0 May 17 13:08 boinc_lockfile
[2025-05-17 14:46:15] -rw-r--r--. 1 boincer umatlas      2538 May 17 13:08 pandaJob.out
[2025-05-17 14:46:15] -rw-------. 1 boincer umatlas       467 May 17 13:08 setup.sh.local
[2025-05-17 14:46:15] -rw-------. 1 boincer umatlas    994627 May 17 13:09 agis_schedconf.cvmfs.json
[2025-05-17 14:46:15] -rw-------. 1 boincer umatlas   1596741 May 17 13:09 agis_ddmendpoints.agis.ALL.json
[2025-05-17 14:46:15] drwx------. 4 boincer umatlas      4096 May 17 13:09 pilot3
[2025-05-17 14:46:15] -rw-r--r--. 1 boincer umatlas      7159 May 17 14:40 init_data.xml
[2025-05-17 14:46:15] -rw-------. 1 boincer umatlas 199681135 May 17 14:44 HITS.44638099._056777.pool.root.1
[2025-05-17 14:46:15] -rw-r--r--. 1 boincer umatlas       530 May 17 14:44 boinc_task_state.xml
[2025-05-17 14:46:15] -rw-------. 1 boincer umatlas      1036 May 17 14:45 memory_monitor_summary.json
[2025-05-17 14:46:15] -rw-------. 1 boincer umatlas    319075 May 17 14:45 log.44638099._056777.job.log.tgz.1
[2025-05-17 14:46:15] -rw-------. 1 boincer umatlas        95 May 17 14:45 pilot_heartbeat.json
[2025-05-17 14:46:15] -rw-------. 1 boincer umatlas      7695 May 17 14:45 heartbeat.json
[2025-05-17 14:46:15] -rw-r--r--. 1 boincer umatlas      8192 May 17 14:46 boinc_mmap_file
[2025-05-17 14:46:15] -rw-r--r--. 1 boincer umatlas        27 May 17 14:46 wrapper_checkpoint.txt
[2025-05-17 14:46:15] -rw-------. 1 boincer umatlas      4476 May 17 14:46 pilotlog.txt
[2025-05-17 14:46:15] -rw-------. 1 boincer umatlas    512854 May 17 14:46 log.44638099._056777.job.log.1
[2025-05-17 14:46:15] -rw-------. 1 boincer umatlas       357 May 17 14:46 output.list
[2025-05-17 14:46:15] -rw-r--r--. 1 boincer umatlas       620 May 17 14:46 runtime_log
[2025-05-17 14:46:15] -rw-------. 1 boincer umatlas    849920 May 17 14:46 result.tar.gz
[2025-05-17 14:46:15] -rw-r--r--. 1 boincer umatlas     11413 May 17 14:46 runtime_log.err
[2025-05-17 14:46:15] -rw-------. 1 boincer umatlas       651 May 17 14:46 ftIKDmVJXa7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmphOKDm0TwM3m.diag
[2025-05-17 14:46:15] -rw-r--r--. 1 boincer umatlas     22485 May 17 14:46 stderr.txt
[2025-05-17 14:46:15] HITS file was successfully produced:
[2025-05-17 14:46:15] -rw-------. 1 boincer umatlas 199681135 May 17 14:44 shared/HITS.pool.root.1
[2025-05-17 14:46:15]  *** Contents of shared directory: ***
[2025-05-17 14:46:15] total 410808
[2025-05-17 14:46:15] -rw-r--r--. 2 boincer umatlas 219586562 May 17 13:08 ATLAS.root_0
[2025-05-17 14:46:15] -rw-r--r--. 2 boincer umatlas     17569 May 17 13:08 start_atlas.sh
[2025-05-17 14:46:15] -rw-r--r--. 2 boincer umatlas    508879 May 17 13:08 input.tar.gz
[2025-05-17 14:46:15] -rw-------. 1 boincer umatlas 199681135 May 17 14:44 HITS.pool.root.1
[2025-05-17 14:46:15] -rw-------. 1 boincer umatlas    849920 May 17 14:46 result.tar.gz
14:46:16 (4164011): run_atlas exited; CPU time 28372.789814
14:46:16 (4164011): called boinc_finish(0)

</stderr_txt>
]]>

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