Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:02:36 (2458726): wrapper (7.7.26015): starting
12:02:36 (2458726): wrapper: running run_atlas (--nthreads 8)
[2025-05-17 12:02:36] Arguments: --nthreads 8
[2025-05-17 12:02:36] Threads: 8
[2025-05-17 12:02:36] Checking for CVMFS
[2025-05-17 12:02:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 12:02:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 12:02:37] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 12:02:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 12:02:38] 2.12.6.0 9719 11348 276432 146106 3 68 23152545 32935936 21658 16776704 0 39102482 99.474 55081047 26725 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-17 12:02:38] CVMFS is ok
[2025-05-17 12:02:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-17 12:02:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-17 12:02:38] Further information can be found at the LHC@home message board.
[2025-05-17 12:02:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 12:02:38] Checking for apptainer binary...
[2025-05-17 12:02:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 12:02:38] Running /usr/bin/apptainer --version
[2025-05-17 12:02:38] apptainer version 1.4.0-1.el9
[2025-05-17 12:02:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 12:02:38] c7-13-32.aglt2.org
[2025-05-17 12:02:38] apptainer works
[2025-05-17 12:02:38] Set ATHENA_PROC_NUMBER=8
[2025-05-17 12:02:38] Set ATHENA_CORE_NUMBER=8
[2025-05-17 12:02:39] Starting ATLAS job with PandaID=6654082477
[2025-05-17 12:02:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 15:45:42]  *** The last 200 lines of the pilot log: ***
[2025-05-17 15:45:42] 2025-05-17 19:45:26,121 | INFO     | mean y: 2056738.0779816513
[2025-05-17 15:45:42] 2025-05-17 19:45:26,121 | INFO     | -- intersect: -48270618020.53462
[2025-05-17 15:45:42] 2025-05-17 19:45:26,122 | INFO     | intersect: -48270618020.53462
[2025-05-17 15:45:42] 2025-05-17 19:45:26,122 | INFO     | chi2: 4.967412604719639
[2025-05-17 15:45:42] 2025-05-17 19:45:26,122 | INFO     | sum of square deviations: 2996360302.910806
[2025-05-17 15:45:42] 2025-05-17 19:45:26,123 | INFO     | sum of deviations: 98773994397.97179
[2025-05-17 15:45:42] 2025-05-17 19:45:26,123 | INFO     | mean x: 1747504327.2065728
[2025-05-17 15:45:42] 2025-05-17 19:45:26,123 | INFO     | mean y: 2063667.5915492957
[2025-05-17 15:45:42] 2025-05-17 19:45:26,123 | INFO     | -- intersect: -57603819863.25549
[2025-05-17 15:45:42] 2025-05-17 19:45:26,123 | INFO     | intersect: -57603819863.25549
[2025-05-17 15:45:42] 2025-05-17 19:45:26,124 | INFO     | chi2: 4.296810122075687
[2025-05-17 15:45:42] 2025-05-17 19:45:26,124 | INFO     | current chi2=4.296810122075687 (change=13.500035853812486 %)
[2025-05-17 15:45:42] 2025-05-17 19:45:26,124 | INFO     | right removable region: 212
[2025-05-17 15:45:42] 2025-05-17 19:45:26,124 | INFO     | sum of square deviations: 2996333462.910806
[2025-05-17 15:45:42] 2025-05-17 19:45:26,125 | INFO     | sum of deviations: 45845904288.17376
[2025-05-17 15:45:42] 2025-05-17 19:45:26,125 | INFO     | mean x: 1747504632.2065728
[2025-05-17 15:45:42] 2025-05-17 19:45:26,125 | INFO     | mean y: 2086916.0187793428
[2025-05-17 15:45:42] 2025-05-17 19:45:26,125 | INFO     | -- intersect: -26735901730.09597
[2025-05-17 15:45:42] 2025-05-17 19:45:26,126 | INFO     | intersect: -26735901730.09597
[2025-05-17 15:45:42] 2025-05-17 19:45:26,126 | INFO     | chi2: 2.706686114616615
[2025-05-17 15:45:42] 2025-05-17 19:45:26,126 | INFO     | current chi2=2.706686114616615 (change=45.51114775436738 %)
[2025-05-17 15:45:42] 2025-05-17 19:45:26,126 | INFO     | sum of square deviations: 2790213852.692305
[2025-05-17 15:45:42] 2025-05-17 19:45:26,127 | INFO     | sum of deviations: 18044453676.67306
[2025-05-17 15:45:42] 2025-05-17 19:45:26,127 | INFO     | mean x: 1747504784.7115386
[2025-05-17 15:45:42] 2025-05-17 19:45:26,127 | INFO     | mean y: 2107488.1778846155
[2025-05-17 15:45:42] 2025-05-17 19:45:26,128 | INFO     | -- intersect: -11299094069.210129
[2025-05-17 15:45:42] 2025-05-17 19:45:26,128 | INFO     | intersect: -11299094069.210129
[2025-05-17 15:45:42] 2025-05-17 19:45:26,128 | INFO     | chi2: 1.8611249143586308
[2025-05-17 15:45:42] 2025-05-17 19:45:26,128 | INFO     | current chi2=1.8611249143586308 (change=31.239721358593975 %)
[2025-05-17 15:45:42] 2025-05-17 19:45:26,128 | INFO     | sum of square deviations: 2593768842.463039
[2025-05-17 15:45:42] 2025-05-17 19:45:26,129 | INFO     | sum of deviations: -9850680812.985224
[2025-05-17 15:45:42] 2025-05-17 19:45:26,129 | INFO     | mean x: 1747504937.2167487
[2025-05-17 15:45:42] 2025-05-17 19:45:26,129 | INFO     | mean y: 2129038.1133004925
[2025-05-17 15:45:42] 2025-05-17 19:45:26,130 | INFO     | -- intersect: 6638847420.192205
[2025-05-17 15:45:42] 2025-05-17 19:45:26,130 | INFO     | intersect: 6638847420.192205
[2025-05-17 15:45:42] 2025-05-17 19:45:26,130 | INFO     | chi2: 0.8471119710545902
[2025-05-17 15:45:42] 2025-05-17 19:45:26,130 | INFO     | current chi2=0.8471119710545902 (change=54.48387346173824 %)
[2025-05-17 15:45:42] 2025-05-17 19:45:26,130 | INFO     | sum of square deviations: 2406765869.7222123
[2025-05-17 15:45:42] 2025-05-17 19:45:26,131 | INFO     | sum of deviations: -12061173497.777777
[2025-05-17 15:45:42] 2025-05-17 19:45:26,131 | INFO     | mean x: 1747505089.7222223
[2025-05-17 15:45:42] 2025-05-17 19:45:26,131 | INFO     | mean y: 2130802.9494949495
[2025-05-17 15:45:42] 2025-05-17 19:45:26,131 | INFO     | -- intersect: 8759510297.375404
[2025-05-17 15:45:42] 2025-05-17 19:45:26,131 | INFO     | intersect: 8759510297.375404
[2025-05-17 15:45:42] 2025-05-17 19:45:26,132 | INFO     | chi2: 0.8052663523070165
[2025-05-17 15:45:42] 2025-05-17 19:45:26,132 | INFO     | current chi2=0.8052663523070165 (change=4.939797828081585 %)
[2025-05-17 15:45:42] 2025-05-17 19:45:26,132 | INFO     | left removable region: 40
[2025-05-17 15:45:42] 2025-05-17 19:45:26,132 | INFO     | sum of square deviations: 1577694395.877904
[2025-05-17 15:45:42] 2025-05-17 19:45:26,133 | INFO     | sum of deviations: 642433907.1395346
[2025-05-17 15:45:42] 2025-05-17 19:45:26,133 | INFO     | mean x: 1747505516.7034883
[2025-05-17 15:45:42] 2025-05-17 19:45:26,133 | INFO     | mean y: 2138337.7674418604
[2025-05-17 15:45:42] 2025-05-17 19:45:26,133 | INFO     | -- intersect: -709442307.8740189
[2025-05-17 15:45:42] 2025-05-17 19:45:26,133 | INFO     | intersect: -709442307.8740189
[2025-05-17 15:45:42] 2025-05-17 19:45:26,134 | INFO     | chi2: 0.10226553729661683
[2025-05-17 15:45:42] 2025-05-17 19:45:26,134 | INFO     | -- intersect: -709442307.8740189
[2025-05-17 15:45:42] 2025-05-17 19:45:26,134 | INFO     | current memory leak: 0.41 B/s (using 172 data points, chi2=0.10)
[2025-05-17 15:45:42] 2025-05-17 19:45:26,135 | INFO     | ..............................
[2025-05-17 15:45:42] 2025-05-17 19:45:26,135 | INFO     | . Timing measurements:
[2025-05-17 15:45:42] 2025-05-17 19:45:26,135 | INFO     | . get job = 0 s
[2025-05-17 15:45:42] 2025-05-17 19:45:26,135 | INFO     | . initial setup = 3 s
[2025-05-17 15:45:42] 2025-05-17 19:45:26,135 | INFO     | . payload setup = 17 s
[2025-05-17 15:45:42] 2025-05-17 19:45:26,135 | INFO     | . stage-in = 0 s
[2025-05-17 15:45:42] 2025-05-17 19:45:26,135 | INFO     | . payload execution = 13261 s
[2025-05-17 15:45:42] 2025-05-17 19:45:26,135 | INFO     | . stage-out = 2 s
[2025-05-17 15:45:42] 2025-05-17 19:45:26,135 | INFO     | . log creation = 0 s
[2025-05-17 15:45:42] 2025-05-17 19:45:26,135 | INFO     | ..............................
[2025-05-17 15:45:42] 2025-05-17 19:45:26,215 | INFO     | 
[2025-05-17 15:45:42] 2025-05-17 19:45:26,215 | INFO     | job summary report
[2025-05-17 15:45:42] 2025-05-17 19:45:26,215 | INFO     | --------------------------------------------------
[2025-05-17 15:45:42] 2025-05-17 19:45:26,215 | INFO     | PanDA job id: 6654082477
[2025-05-17 15:45:42] 2025-05-17 19:45:26,215 | INFO     | task id: 44638099
[2025-05-17 15:45:42] 2025-05-17 19:45:26,216 | INFO     | errors: (none)
[2025-05-17 15:45:42] 2025-05-17 19:45:26,216 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 15:45:42] 2025-05-17 19:45:26,216 | INFO     | pilot state: finished 
[2025-05-17 15:45:42] 2025-05-17 19:45:26,216 | INFO     | transexitcode: 0
[2025-05-17 15:45:42] 2025-05-17 19:45:26,216 | INFO     | exeerrorcode: 0
[2025-05-17 15:45:42] 2025-05-17 19:45:26,216 | INFO     | exeerrordiag: 
[2025-05-17 15:45:42] 2025-05-17 19:45:26,216 | INFO     | exitcode: 0
[2025-05-17 15:45:42] 2025-05-17 19:45:26,216 | INFO     | exitmsg: OK
[2025-05-17 15:45:42] 2025-05-17 19:45:26,216 | INFO     | cpuconsumptiontime: 39559 s
[2025-05-17 15:45:42] 2025-05-17 19:45:26,216 | INFO     | nevents: 400
[2025-05-17 15:45:42] 2025-05-17 19:45:26,216 | INFO     | neventsw: 0
[2025-05-17 15:45:42] 2025-05-17 19:45:26,216 | INFO     | pid: 2470189
[2025-05-17 15:45:42] 2025-05-17 19:45:26,216 | INFO     | pgrp: 2470189
[2025-05-17 15:45:42] 2025-05-17 19:45:26,216 | INFO     | corecount: 8
[2025-05-17 15:45:42] 2025-05-17 19:45:26,216 | INFO     | event service: False
[2025-05-17 15:45:42] 2025-05-17 19:45:26,216 | INFO     | sizes: {0: 2393655, 11: 2393655, 18: 2393889, 22: 2393917, 13282: 2423835, 13283: 2423834, 13286: 2432959, 13289: 2433015, 13294: 2433185}
[2025-05-17 15:45:42] 2025-05-17 19:45:26,216 | INFO     | --------------------------------------------------
[2025-05-17 15:45:42] 2025-05-17 19:45:26,216 | INFO     | 
[2025-05-17 15:45:42] 2025-05-17 19:45:26,217 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-17 15:45:42] 2025-05-17 19:45:26,239 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 15:45:42] 2025-05-17 19:45:26,239 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 15:45:42] 2025-05-17 19:45:26,239 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 15:45:42] 2025-05-17 19:45:26,240 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 15:45:42] 2025-05-17 19:45:26,240 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 15:45:42] 2025-05-17 19:45:26,240 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 15:45:42] 2025-05-17 19:45:26,240 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 15:45:42] 2025-05-17 19:45:26,240 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 15:45:42] 2025-05-17 19:45:26,241 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 15:45:42] 2025-05-17 19:45:26,241 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 15:45:42] 2025-05-17 19:45:26,241 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 15:45:42] 2025-05-17 19:45:26,241 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 15:45:42] 2025-05-17 19:45:26,241 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 15:45:42] 2025-05-17 19:45:26,241 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 15:45:42] 2025-05-17 19:45:26,241 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 15:45:42] 2025-05-17 19:45:26,241 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 15:45:42] 2025-05-17 19:45:26,241 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 15:45:42] 2025-05-17 19:45:26,241 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 15:45:42] 2025-05-17 19:45:26,241 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 15:45:42] 2025-05-17 19:45:26,241 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 15:45:42] 2025-05-17 19:45:26,242 | INFO     | job 6654082477 has completed (purged errors)
[2025-05-17 15:45:42] 2025-05-17 19:45:26,242 | INFO     | overall cleanup function is called
[2025-05-17 15:45:42] 2025-05-17 19:45:27,250 | INFO     | --- collectZombieJob: --- 10, [2470189]
[2025-05-17 15:45:42] 2025-05-17 19:45:27,250 | INFO     | zombie collector waiting for pid 2470189
[2025-05-17 15:45:42] 2025-05-17 19:45:27,251 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 15:45:42] 2025-05-17 19:45:27,251 | INFO     | collected zombie processes
[2025-05-17 15:45:42] 2025-05-17 19:45:27,251 | INFO     | will attempt to kill all subprocesses of pid=2470189
[2025-05-17 15:45:42] 2025-05-17 19:45:27,560 | INFO     | 13337s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-05-17 15:45:42] 2025-05-17 19:45:27,615 | INFO     | process IDs to be killed: [2470189] (in reverse order)
[2025-05-17 15:45:42] 2025-05-17 19:45:27,737 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 15:45:42] 2025-05-17 19:45:27,737 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 15:45:42] 2025-05-17 19:45:27,754 | INFO     | did not find any defunct processes belonging to 2470189
[2025-05-17 15:45:42] 2025-05-17 19:45:27,770 | INFO     | did not find any defunct processes belonging to 2470189
[2025-05-17 15:45:42] 2025-05-17 19:45:27,771 | INFO     | ready for new job
[2025-05-17 15:45:42] 2025-05-17 19:45:27,771 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 15:45:42] 2025-05-17 19:45:27,772 | INFO     | **************************************
[2025-05-17 15:45:42] 2025-05-17 19:45:27,773 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 15:45:42] 2025-05-17 19:45:27,773 | INFO     | **************************************
[2025-05-17 15:45:42] 2025-05-17 19:45:27,773 | INFO     | 
[2025-05-17 15:45:42] 2025-05-17 19:45:27,789 | INFO     | architecture information:
[2025-05-17 15:45:42] 2025-05-17 19:45:27,789 | INFO     | executing command: cat /etc/os-release
[2025-05-17 15:45:42] 2025-05-17 19:45:27,807 | INFO     | cat /etc/os-release:
[2025-05-17 15:45:42] NAME="CentOS Linux"
[2025-05-17 15:45:42] VERSION="7 (Core)"
[2025-05-17 15:45:42] ID="centos"
[2025-05-17 15:45:42] ID_LIKE="rhel fedora"
[2025-05-17 15:45:42] VERSION_ID="7"
[2025-05-17 15:45:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 15:45:42] ANSI_COLOR="0;31"
[2025-05-17 15:45:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 15:45:42] HOME_URL="https://www.centos.org/"
[2025-05-17 15:45:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 15:45:42] 
[2025-05-17 15:45:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 15:45:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 15:45:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 15:45:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 15:45:42] 
[2025-05-17 15:45:42] 2025-05-17 19:45:27,807 | INFO     | **************************************
[2025-05-17 15:45:42] 2025-05-17 19:45:28,309 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-17 15:45:42] 2025-05-17 19:45:28,328 | INFO     | sufficient remaining disk space (95593431040 B)
[2025-05-17 15:45:42] 2025-05-17 19:45:28,328 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 15:45:42] 2025-05-17 19:45:28,329 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 15:45:42] 2025-05-17 19:45:28,329 | INFO     | update_server=False
[2025-05-17 15:45:42] 2025-05-17 19:45:28,329 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 15:45:42] 2025-05-17 19:45:28,329 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 15:45:42] 2025-05-17 19:45:28,535 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 15:45:42] 2025-05-17 19:45:28,535 | INFO     | aborting loop
[2025-05-17 15:45:42] 2025-05-17 19:45:28,987 | INFO     | PID=2463115 has CPU usage=11.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-05-17 15:45:42] 2025-05-17 19:45:28,987 | INFO     | .. there are 30 such processes running
[2025-05-17 15:45:42] 2025-05-17 19:45:28,987 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 15:45:42] 2025-05-17 19:45:28,988 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 15:45:42] 2025-05-17 19:45:28,988 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 15:45:42] 2025-05-17 19:45:29,102 | INFO     | all data control threads have been joined
[2025-05-17 15:45:42] 2025-05-17 19:45:29,328 | INFO     | all payload control threads have been joined
[2025-05-17 15:45:42] 2025-05-17 19:45:29,335 | INFO     | [job] retrieve thread has finished
[2025-05-17 15:45:42] 2025-05-17 19:45:29,504 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 15:45:42] 2025-05-17 19:45:29,540 | INFO     | [job] job monitor thread has finished
[2025-05-17 15:45:42] 2025-05-17 19:45:29,659 | INFO     | all job control threads have been joined
[2025-05-17 15:45:42] 2025-05-17 19:45:29,938 | INFO     | [data] copytool_in thread has finished
[2025-05-17 15:45:42] 2025-05-17 19:45:30,039 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 15:45:42] 2025-05-17 19:45:30,069 | INFO     | [payload] validate_post thread has finished
[2025-05-17 15:45:42] 2025-05-17 19:45:30,108 | INFO     | [data] control thread has finished
[2025-05-17 15:45:42] 2025-05-17 19:45:30,149 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 15:45:42] 2025-05-17 19:45:30,194 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 15:45:42] 2025-05-17 19:45:30,333 | INFO     | [payload] control thread has finished
[2025-05-17 15:45:42] 2025-05-17 19:45:30,336 | INFO     | [data] copytool_out thread has finished
[2025-05-17 15:45:42] 2025-05-17 19:45:30,525 | INFO     | [job] validate thread has finished
[2025-05-17 15:45:42] 2025-05-17 19:45:30,621 | INFO     | [payload] failed_post thread has finished
[2025-05-17 15:45:42] 2025-05-17 19:45:30,664 | INFO     | [job] control thread has finished
[2025-05-17 15:45:42] 2025-05-17 19:45:31,229 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 15:45:42] 2025-05-17 19:45:31,518 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 15:45:42] 2025-05-17 19:45:32,234 | INFO     | [job] queue monitor thread has finished
[2025-05-17 15:45:42] 2025-05-17 19:45:35,526 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 15:45:42] 2025-05-17 19:45:37,421 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139879349249856)>', '<ExcThread(monitor, started 139878998193920)>']
[2025-05-17 15:45:42] 2025-05-17 19:45:38,035 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 15:45:42] 2025-05-17 19:45:38,035 | INFO     | [monitor] control thread has ended
[2025-05-17 15:45:42] 2025-05-17 19:45:42,445 | INFO     | all workflow threads have been joined
[2025-05-17 15:45:42] 2025-05-17 19:45:42,445 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 15:45:42] 2025-05-17 19:45:42,446 | INFO     | traces error code: 0
[2025-05-17 15:45:42] 2025-05-17 19:45:42,446 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 15:45:42] 2025-05-17 19:45:42,586 [wrapper] ==== pilot stdout END ====
[2025-05-17 15:45:42] 2025-05-17 19:45:42,589 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 15:45:42] 2025-05-17 19:45:42,593 [wrapper] pilotpid: 2463115
[2025-05-17 15:45:42] 2025-05-17 19:45:42,599 [wrapper] Pilot exit status: 0
[2025-05-17 15:45:42] 2025-05-17 19:45:42,611 [wrapper] pandaids: 6654082477
[2025-05-17 15:45:42] 2025-05-17 19:45:42,700 [wrapper] cleanup supervisor_pilot 3588290 2463116
[2025-05-17 15:45:42] 2025-05-17 19:45:42,752 [wrapper] Test setup, not cleaning
[2025-05-17 15:45:42] 2025-05-17 19:45:42,772 [wrapper] apfmon messages muted
[2025-05-17 15:45:42] 2025-05-17 19:45:42,795 [wrapper] ==== wrapper stdout END ====
[2025-05-17 15:45:42] 2025-05-17 19:45:42,816 [wrapper] ==== wrapper stderr END ====
[2025-05-17 15:45:42]  *** Error codes and diagnostics ***
[2025-05-17 15:45:42]     "exeErrorCode": 0,
[2025-05-17 15:45:42]     "exeErrorDiag": "",
[2025-05-17 15:45:42]     "pilotErrorCode": 0,
[2025-05-17 15:45:42]     "pilotErrorDiag": "",
[2025-05-17 15:45:42]  *** Listing of results directory ***
[2025-05-17 15:45:42] total 412004
[2025-05-17 15:45:42] -rw-r--r--. 1 boincer umatlas    495897 May 17 09:14 pilot3.tar.gz
[2025-05-17 15:45:42] -rw-r--r--. 1 boincer umatlas      5111 May 17 09:23 queuedata.json
[2025-05-17 15:45:42] -rwx------. 1 boincer umatlas     37140 May 17 09:24 runpilot2-wrapper.sh
[2025-05-17 15:45:42] -rw-r--r--. 1 boincer umatlas       100 May 17 12:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 15:45:42] -rwxr-xr-x. 1 boincer umatlas      7986 May 17 12:02 run_atlas
[2025-05-17 15:45:42] -rw-r--r--. 1 boincer umatlas       105 May 17 12:02 job.xml
[2025-05-17 15:45:42] -rw-r--r--. 2 boincer umatlas 225180884 May 17 12:02 EVNT.44638096._001502.pool.root.1
[2025-05-17 15:45:42] -rw-r--r--. 2 boincer umatlas    508884 May 17 12:02 input.tar.gz
[2025-05-17 15:45:42] -rw-r--r--. 2 boincer umatlas     17569 May 17 12:02 start_atlas.sh
[2025-05-17 15:45:42] drwxrwx--x. 2 boincer umatlas      4096 May 17 12:02 shared
[2025-05-17 15:45:42] -rw-r--r--. 1 boincer umatlas         0 May 17 12:02 boinc_lockfile
[2025-05-17 15:45:42] -rw-r--r--. 1 boincer umatlas      2536 May 17 12:02 pandaJob.out
[2025-05-17 15:45:42] -rw-------. 1 boincer umatlas       467 May 17 12:02 setup.sh.local
[2025-05-17 15:45:42] -rw-------. 1 boincer umatlas    994619 May 17 12:03 agis_schedconf.cvmfs.json
[2025-05-17 15:45:42] drwx------. 4 boincer umatlas      4096 May 17 12:03 pilot3
[2025-05-17 15:45:42] -rw-r--r--. 1 boincer umatlas      6897 May 17 15:40 init_data.xml
[2025-05-17 15:45:42] -rw-------. 1 boincer umatlas 189813617 May 17 15:44 HITS.44638099._056319.pool.root.1
[2025-05-17 15:45:42] -rw-r--r--. 1 boincer umatlas       531 May 17 15:44 boinc_task_state.xml
[2025-05-17 15:45:42] -rw-------. 1 boincer umatlas        95 May 17 15:44 pilot_heartbeat.json
[2025-05-17 15:45:42] -rw-------. 1 boincer umatlas      1031 May 17 15:45 memory_monitor_summary.json
[2025-05-17 15:45:42] -rw-------. 1 boincer umatlas   1596741 May 17 15:45 agis_ddmendpoints.agis.ALL.json
[2025-05-17 15:45:42] -rw-------. 1 boincer umatlas    369189 May 17 15:45 log.44638099._056319.job.log.tgz.1
[2025-05-17 15:45:42] -rw-------. 1 boincer umatlas      7680 May 17 15:45 heartbeat.json
[2025-05-17 15:45:42] -rw-r--r--. 1 boincer umatlas      8192 May 17 15:45 boinc_mmap_file
[2025-05-17 15:45:42] -rw-r--r--. 1 boincer umatlas        28 May 17 15:45 wrapper_checkpoint.txt
[2025-05-17 15:45:42] -rw-------. 1 boincer umatlas      4749 May 17 15:45 pilotlog.txt
[2025-05-17 15:45:42] -rw-------. 1 boincer umatlas   1153079 May 17 15:45 log.44638099._056319.job.log.1
[2025-05-17 15:45:42] -rw-------. 1 boincer umatlas       357 May 17 15:45 output.list
[2025-05-17 15:45:42] -rw-r--r--. 1 boincer umatlas       620 May 17 15:45 runtime_log
[2025-05-17 15:45:42] -rw-------. 1 boincer umatlas   1546240 May 17 15:45 result.tar.gz
[2025-05-17 15:45:42] -rw-r--r--. 1 boincer umatlas     11419 May 17 15:45 runtime_log.err
[2025-05-17 15:45:42] -rw-------. 1 boincer umatlas       656 May 17 15:45 LIZLDmHiWa7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9cOKDmgKreMo.diag
[2025-05-17 15:45:42] -rw-r--r--. 1 boincer umatlas     20994 May 17 15:45 stderr.txt
[2025-05-17 15:45:42] HITS file was successfully produced:
[2025-05-17 15:45:42] -rw-------. 1 boincer umatlas 189813617 May 17 15:44 shared/HITS.pool.root.1
[2025-05-17 15:45:42]  *** Contents of shared directory: ***
[2025-05-17 15:45:42] total 407312
[2025-05-17 15:45:42] -rw-r--r--. 2 boincer umatlas 225180884 May 17 12:02 ATLAS.root_0
[2025-05-17 15:45:42] -rw-r--r--. 2 boincer umatlas    508884 May 17 12:02 input.tar.gz
[2025-05-17 15:45:42] -rw-r--r--. 2 boincer umatlas     17569 May 17 12:02 start_atlas.sh
[2025-05-17 15:45:42] -rw-------. 1 boincer umatlas 189813617 May 17 15:44 HITS.pool.root.1
[2025-05-17 15:45:42] -rw-------. 1 boincer umatlas   1546240 May 17 15:45 result.tar.gz
15:45:44 (2458726): run_atlas exited; CPU time 39830.860464
15:45:44 (2458726): called boinc_finish(0)

</stderr_txt>
]]>

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