Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:57:06 (2331376): wrapper (7.7.26015): starting
11:57:06 (2331376): wrapper: running run_atlas (--nthreads 8)
[2025-05-17 11:57:06] Arguments: --nthreads 8
[2025-05-17 11:57:06] Threads: 8
[2025-05-17 11:57:06] Checking for CVMFS
[2025-05-17 11:57:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 11:57:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 11:57:07] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 11:57:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 11:57:08] 2.12.6.0 8763 7075 314484 146106 3 658 26056498 32935937 41522 16776704 0 99614697 99.600 101290381 36803 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-17 11:57:08] CVMFS is ok
[2025-05-17 11:57:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-17 11:57:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-17 11:57:08] Further information can be found at the LHC@home message board.
[2025-05-17 11:57:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 11:57:08] Checking for apptainer binary...
[2025-05-17 11:57:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 11:57:08] Running /usr/bin/apptainer --version
[2025-05-17 11:57:08] apptainer version 1.4.0-1.el9
[2025-05-17 11:57:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 11:57:08] c7-9-14.aglt2.org
[2025-05-17 11:57:08] apptainer works
[2025-05-17 11:57:08] Set ATHENA_PROC_NUMBER=8
[2025-05-17 11:57:08] Set ATHENA_CORE_NUMBER=8
[2025-05-17 11:57:08] Starting ATLAS job with PandaID=6653702553
[2025-05-17 11:57:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 13:32:44]  *** The last 200 lines of the pilot log: ***
[2025-05-17 13:32:44] 2025-05-17 17:31:43,847 | INFO     | .. there are 81 such processes running
[2025-05-17 13:32:44] 2025-05-17 17:31:44,828 | INFO     | monitor loop #381: job 0:6653702553 is in state 'finished'
[2025-05-17 13:32:44] 2025-05-17 17:31:44,829 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 13:32:44] 2025-05-17 17:31:47,338 | INFO     | monitor loop #382: job 0:6653702553 is in state 'finished'
[2025-05-17 13:32:44] 2025-05-17 17:31:47,339 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 13:32:44] 2025-05-17 17:31:49,845 | INFO     | monitor loop #383: job 0:6653702553 is in state 'finished'
[2025-05-17 13:32:44] 2025-05-17 17:31:49,846 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 13:32:44] 2025-05-17 17:31:52,371 | INFO     | monitor loop #384: job 0:6653702553 is in state 'finished'
[2025-05-17 13:32:44] 2025-05-17 17:31:52,372 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 13:32:44] 2025-05-17 17:31:54,876 | INFO     | monitor loop #385: job 0:6653702553 is in state 'finished'
[2025-05-17 13:32:44] 2025-05-17 17:31:54,877 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 13:32:44] 2025-05-17 17:31:57,381 | INFO     | monitor loop #386: job 0:6653702553 is in state 'finished'
[2025-05-17 13:32:44] 2025-05-17 17:31:57,382 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 13:32:44] 2025-05-17 17:31:59,907 | INFO     | monitor loop #387: job 0:6653702553 is in state 'finished'
[2025-05-17 13:32:44] 2025-05-17 17:31:59,908 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 13:32:44] 2025-05-17 17:32:02,415 | INFO     | monitor loop #388: job 0:6653702553 is in state 'finished'
[2025-05-17 13:32:44] 2025-05-17 17:32:02,416 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 13:32:44] 2025-05-17 17:32:04,926 | INFO     | monitor loop #389: job 0:6653702553 is in state 'finished'
[2025-05-17 13:32:44] 2025-05-17 17:32:04,927 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 13:32:44] 2025-05-17 17:32:07,481 | INFO     | monitor loop #390: job 0:6653702553 is in state 'finished'
[2025-05-17 13:32:44] 2025-05-17 17:32:07,481 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 13:32:44] 2025-05-17 17:32:08,214 | INFO     | PID=2344018 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-17 13:32:44] 2025-05-17 17:32:08,214 | INFO     | .. there are 81 such processes running
[2025-05-17 13:32:44] 2025-05-17 17:32:09,985 | INFO     | monitor loop #391: job 0:6653702553 is in state 'finished'
[2025-05-17 13:32:44] 2025-05-17 17:32:09,986 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 13:32:44] 2025-05-17 17:32:12,497 | INFO     | monitor loop #392: job 0:6653702553 is in state 'finished'
[2025-05-17 13:32:44] 2025-05-17 17:32:12,498 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 13:32:44] 2025-05-17 17:32:15,002 | INFO     | monitor loop #393: job 0:6653702553 is in state 'finished'
[2025-05-17 13:32:44] 2025-05-17 17:32:15,003 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 13:32:44] 2025-05-17 17:32:17,507 | INFO     | monitor loop #394: job 0:6653702553 is in state 'finished'
[2025-05-17 13:32:44] 2025-05-17 17:32:17,508 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 13:32:44] 2025-05-17 17:32:20,012 | INFO     | monitor loop #395: job 0:6653702553 is in state 'finished'
[2025-05-17 13:32:44] 2025-05-17 17:32:20,013 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 13:32:44] 2025-05-17 17:32:22,517 | INFO     | monitor loop #396: job 0:6653702553 is in state 'finished'
[2025-05-17 13:32:44] 2025-05-17 17:32:22,518 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 13:32:44] 2025-05-17 17:32:25,023 | INFO     | monitor loop #397: job 0:6653702553 is in state 'finished'
[2025-05-17 13:32:44] 2025-05-17 17:32:25,024 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 13:32:44] 2025-05-17 17:32:27,547 | INFO     | monitor loop #398: job 0:6653702553 is in state 'finished'
[2025-05-17 13:32:44] 2025-05-17 17:32:27,548 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 13:32:44] 2025-05-17 17:32:27,730 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-17 13:32:44] 2025-05-17 17:32:27,730 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6653702553/memory_monitor_summary.json (trf name=prmon)
[2025-05-17 13:32:44] 2025-05-17 17:32:27,735 | INFO     | extracted standard info from prmon json
[2025-05-17 13:32:44] 2025-05-17 17:32:27,735 | INFO     | extracted standard memory fields from prmon json
[2025-05-17 13:32:44] 2025-05-17 17:32:27,735 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-17 13:32:44] 2025-05-17 17:32:27,735 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-17 13:32:44] 2025-05-17 17:32:27,735 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-17 13:32:44] 2025-05-17 17:32:27,736 | INFO     | fitting pss+swap vs Time
[2025-05-17 13:32:44] 2025-05-17 17:32:27,737 | INFO     | sum of square deviations: 177275882.0
[2025-05-17 13:32:44] 2025-05-17 17:32:27,737 | INFO     | sum of deviations: 24631980194.000004
[2025-05-17 13:32:44] 2025-05-17 17:32:27,737 | INFO     | mean x: 1747500407.0
[2025-05-17 13:32:44] 2025-05-17 17:32:27,737 | INFO     | mean y: 2017094.9518072288
[2025-05-17 13:32:44] 2025-05-17 17:32:27,737 | INFO     | -- intersect: -242808200113.44965
[2025-05-17 13:32:44] 2025-05-17 17:32:27,737 | INFO     | intersect: -242808200113.44965
[2025-05-17 13:32:44] 2025-05-17 17:32:27,737 | INFO     | chi2: 2.7453947771732663
[2025-05-17 13:32:44] 2025-05-17 17:32:27,737 | INFO     | -- intersect: -242808200113.44965
[2025-05-17 13:32:44] 2025-05-17 17:32:27,737 | INFO     | current memory leak: 138.95 B/s (using 83 data points, chi2=2.75)
[2025-05-17 13:32:44] 2025-05-17 17:32:27,738 | INFO     | ..............................
[2025-05-17 13:32:44] 2025-05-17 17:32:27,738 | INFO     | . Timing measurements:
[2025-05-17 13:32:44] 2025-05-17 17:32:27,738 | INFO     | . get job = 0 s
[2025-05-17 13:32:44] 2025-05-17 17:32:27,738 | INFO     | . initial setup = 4 s
[2025-05-17 13:32:44] 2025-05-17 17:32:27,738 | INFO     | . payload setup = 34 s
[2025-05-17 13:32:44] 2025-05-17 17:32:27,738 | INFO     | . stage-in = 0 s
[2025-05-17 13:32:44] 2025-05-17 17:32:27,738 | INFO     | . payload execution = 5505 s
[2025-05-17 13:32:44] 2025-05-17 17:32:27,738 | INFO     | . stage-out = 2 s
[2025-05-17 13:32:44] 2025-05-17 17:32:27,738 | INFO     | . log creation = 0 s
[2025-05-17 13:32:44] 2025-05-17 17:32:27,738 | INFO     | ..............................
[2025-05-17 13:32:44] 2025-05-17 17:32:27,928 | INFO     | 
[2025-05-17 13:32:44] 2025-05-17 17:32:27,928 | INFO     | job summary report
[2025-05-17 13:32:44] 2025-05-17 17:32:27,928 | INFO     | --------------------------------------------------
[2025-05-17 13:32:44] 2025-05-17 17:32:27,928 | INFO     | PanDA job id: 6653702553
[2025-05-17 13:32:44] 2025-05-17 17:32:27,928 | INFO     | task id: 44638099
[2025-05-17 13:32:44] 2025-05-17 17:32:27,928 | INFO     | errors: (none)
[2025-05-17 13:32:44] 2025-05-17 17:32:27,928 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 13:32:44] 2025-05-17 17:32:27,928 | INFO     | pilot state: finished 
[2025-05-17 13:32:44] 2025-05-17 17:32:27,928 | INFO     | transexitcode: 0
[2025-05-17 13:32:44] 2025-05-17 17:32:27,928 | INFO     | exeerrorcode: 0
[2025-05-17 13:32:44] 2025-05-17 17:32:27,928 | INFO     | exeerrordiag: 
[2025-05-17 13:32:44] 2025-05-17 17:32:27,928 | INFO     | exitcode: 0
[2025-05-17 13:32:44] 2025-05-17 17:32:27,928 | INFO     | exitmsg: OK
[2025-05-17 13:32:44] 2025-05-17 17:32:27,928 | INFO     | cpuconsumptiontime: 27284 s
[2025-05-17 13:32:44] 2025-05-17 17:32:27,928 | INFO     | nevents: 400
[2025-05-17 13:32:44] 2025-05-17 17:32:27,928 | INFO     | neventsw: 0
[2025-05-17 13:32:44] 2025-05-17 17:32:27,928 | INFO     | pid: 2374365
[2025-05-17 13:32:44] 2025-05-17 17:32:27,928 | INFO     | pgrp: 2374365
[2025-05-17 13:32:44] 2025-05-17 17:32:27,928 | INFO     | corecount: 8
[2025-05-17 13:32:44] 2025-05-17 17:32:27,928 | INFO     | event service: False
[2025-05-17 13:32:44] 2025-05-17 17:32:27,928 | INFO     | sizes: {0: 2393489, 1: 2393688, 12: 2393688, 22: 2393716, 26: 2393950, 33: 2393978, 5544: 2420541, 5548: 2429510, 5551: 2429566, 5607: 2429736}
[2025-05-17 13:32:44] 2025-05-17 17:32:27,928 | INFO     | --------------------------------------------------
[2025-05-17 13:32:44] 2025-05-17 17:32:27,928 | INFO     | 
[2025-05-17 13:32:44] 2025-05-17 17:32:27,929 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-05-17 13:32:44] 2025-05-17 17:32:28,183 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 13:32:44] 2025-05-17 17:32:28,183 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 13:32:44] 2025-05-17 17:32:28,183 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 13:32:44] 2025-05-17 17:32:28,183 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 13:32:44] 2025-05-17 17:32:28,183 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 13:32:44] 2025-05-17 17:32:28,183 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 13:32:44] 2025-05-17 17:32:28,183 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 13:32:44] 2025-05-17 17:32:28,183 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 13:32:44] 2025-05-17 17:32:28,183 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 13:32:44] 2025-05-17 17:32:28,183 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 13:32:44] 2025-05-17 17:32:28,183 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 13:32:44] 2025-05-17 17:32:28,183 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 13:32:44] 2025-05-17 17:32:28,183 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 13:32:44] 2025-05-17 17:32:28,183 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 13:32:44] 2025-05-17 17:32:28,183 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 13:32:44] 2025-05-17 17:32:28,183 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 13:32:44] 2025-05-17 17:32:28,183 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 13:32:44] 2025-05-17 17:32:28,184 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 13:32:44] 2025-05-17 17:32:28,184 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 13:32:44] 2025-05-17 17:32:28,184 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 13:32:44] 2025-05-17 17:32:28,184 | INFO     | job 6653702553 has completed (purged errors)
[2025-05-17 13:32:44] 2025-05-17 17:32:28,184 | INFO     | overall cleanup function is called
[2025-05-17 13:32:44] 2025-05-17 17:32:29,191 | INFO     | --- collectZombieJob: --- 10, [2374365]
[2025-05-17 13:32:44] 2025-05-17 17:32:29,192 | INFO     | zombie collector waiting for pid 2374365
[2025-05-17 13:32:44] 2025-05-17 17:32:29,192 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 13:32:44] 2025-05-17 17:32:29,192 | INFO     | collected zombie processes
[2025-05-17 13:32:44] 2025-05-17 17:32:29,192 | INFO     | will attempt to kill all subprocesses of pid=2374365
[2025-05-17 13:32:44] 2025-05-17 17:32:30,482 | INFO     | process IDs to be killed: [2374365] (in reverse order)
[2025-05-17 13:32:44] 2025-05-17 17:32:30,808 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 13:32:44] 2025-05-17 17:32:30,808 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 13:32:44] 2025-05-17 17:32:30,841 | INFO     | did not find any defunct processes belonging to 2374365
[2025-05-17 13:32:44] 2025-05-17 17:32:30,898 | INFO     | did not find any defunct processes belonging to 2374365
[2025-05-17 13:32:44] 2025-05-17 17:32:30,899 | INFO     | ready for new job
[2025-05-17 13:32:44] 2025-05-17 17:32:30,899 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 13:32:44] 2025-05-17 17:32:30,900 | INFO     | **************************************
[2025-05-17 13:32:44] 2025-05-17 17:32:30,915 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 13:32:44] 2025-05-17 17:32:30,916 | INFO     | **************************************
[2025-05-17 13:32:44] 2025-05-17 17:32:30,916 | INFO     | 
[2025-05-17 13:32:44] 2025-05-17 17:32:30,928 | INFO     | architecture information:
[2025-05-17 13:32:44] 2025-05-17 17:32:30,971 | INFO     | executing command: cat /etc/os-release
[2025-05-17 13:32:44] 2025-05-17 17:32:31,137 | INFO     | cat /etc/os-release:
[2025-05-17 13:32:44] NAME="CentOS Linux"
[2025-05-17 13:32:44] VERSION="7 (Core)"
[2025-05-17 13:32:44] ID="centos"
[2025-05-17 13:32:44] ID_LIKE="rhel fedora"
[2025-05-17 13:32:44] VERSION_ID="7"
[2025-05-17 13:32:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 13:32:44] ANSI_COLOR="0;31"
[2025-05-17 13:32:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 13:32:44] HOME_URL="https://www.centos.org/"
[2025-05-17 13:32:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 13:32:44] 
[2025-05-17 13:32:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 13:32:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 13:32:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 13:32:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 13:32:44] 
[2025-05-17 13:32:44] 2025-05-17 17:32:31,137 | INFO     | **************************************
[2025-05-17 13:32:44] 2025-05-17 17:32:31,658 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-05-17 13:32:44] 2025-05-17 17:32:31,747 | INFO     | sufficient remaining disk space (72480718848 B)
[2025-05-17 13:32:44] 2025-05-17 17:32:31,747 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 13:32:44] 2025-05-17 17:32:31,748 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 13:32:44] 2025-05-17 17:32:31,748 | INFO     | update_server=False
[2025-05-17 13:32:44] 2025-05-17 17:32:31,748 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 13:32:44] 2025-05-17 17:32:31,749 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 13:32:44] 2025-05-17 17:32:31,750 | INFO     | aborting loop
[2025-05-17 13:32:44] 2025-05-17 17:32:31,765 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 13:32:44] 2025-05-17 17:32:31,779 | INFO     | all job control threads have been joined
[2025-05-17 13:32:44] 2025-05-17 17:32:32,289 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 13:32:44] 2025-05-17 17:32:32,381 | INFO     | all data control threads have been joined
[2025-05-17 13:32:44] 2025-05-17 17:32:32,440 | INFO     | PID=2344018 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-17 13:32:44] 2025-05-17 17:32:32,471 | INFO     | .. there are 81 such processes running
[2025-05-17 13:32:44] 2025-05-17 17:32:32,471 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 13:32:44] 2025-05-17 17:32:32,471 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 13:32:44] 2025-05-17 17:32:32,471 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 13:32:44] 2025-05-17 17:32:32,754 | INFO     | [job] retrieve thread has finished
[2025-05-17 13:32:44] 2025-05-17 17:32:32,766 | INFO     | [job] job monitor thread has finished
[2025-05-17 13:32:44] 2025-05-17 17:32:32,786 | INFO     | [job] control thread has finished
[2025-05-17 13:32:44] 2025-05-17 17:32:32,850 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 13:32:44] 2025-05-17 17:32:32,862 | INFO     | [job] validate thread has finished
[2025-05-17 13:32:44] 2025-05-17 17:32:32,865 | INFO     | [data] copytool_in thread has finished
[2025-05-17 13:32:44] 2025-05-17 17:32:32,975 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 13:32:44] 2025-05-17 17:32:33,074 | INFO     | all payload control threads have been joined
[2025-05-17 13:32:44] 2025-05-17 17:32:33,374 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 13:32:44] 2025-05-17 17:32:33,386 | INFO     | [data] control thread has finished
[2025-05-17 13:32:44] 2025-05-17 17:32:33,438 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 13:32:44] 2025-05-17 17:32:33,497 | INFO     | [payload] failed_post thread has finished
[2025-05-17 13:32:44] 2025-05-17 17:32:33,778 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 13:32:44] 2025-05-17 17:32:33,981 | INFO     | [job] queue monitor thread has finished
[2025-05-17 13:32:44] 2025-05-17 17:32:34,059 | INFO     | [payload] validate_post thread has finished
[2025-05-17 13:32:44] 2025-05-17 17:32:34,089 | INFO     | [payload] control thread has finished
[2025-05-17 13:32:44] 2025-05-17 17:32:34,296 | INFO     | [data] copytool_out thread has finished
[2025-05-17 13:32:44] 2025-05-17 17:32:35,780 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 13:32:44] 2025-05-17 17:32:37,357 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139741135062848)>', '<ExcThread(monitor, started 139740477105920)>']
[2025-05-17 13:32:44] 2025-05-17 17:32:37,499 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 13:32:44] 2025-05-17 17:32:37,500 | INFO     | [monitor] control thread has ended
[2025-05-17 13:32:44] 2025-05-17 17:32:42,383 | INFO     | all workflow threads have been joined
[2025-05-17 13:32:44] 2025-05-17 17:32:42,384 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 13:32:44] 2025-05-17 17:32:42,384 | INFO     | traces error code: 0
[2025-05-17 13:32:44] 2025-05-17 17:32:42,384 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 13:32:44] 2025-05-17 17:32:42,652 [wrapper] ==== pilot stdout END ====
[2025-05-17 13:32:44] 2025-05-17 17:32:42,693 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 13:32:44] 2025-05-17 17:32:42,733 [wrapper] pilotpid: 2344018
[2025-05-17 13:32:44] 2025-05-17 17:32:42,768 [wrapper] Pilot exit status: 0
[2025-05-17 13:32:44] 2025-05-17 17:32:42,947 [wrapper] pandaids: 6653702553
[2025-05-17 13:32:44] 2025-05-17 17:32:43,220 [wrapper] cleanup supervisor_pilot  516966 2344019
[2025-05-17 13:32:44] 2025-05-17 17:32:43,227 [wrapper] Test setup, not cleaning
[2025-05-17 13:32:44] 2025-05-17 17:32:43,246 [wrapper] apfmon messages muted
[2025-05-17 13:32:44] 2025-05-17 17:32:43,310 [wrapper] ==== wrapper stdout END ====
[2025-05-17 13:32:44] 2025-05-17 17:32:43,317 [wrapper] ==== wrapper stderr END ====
[2025-05-17 13:32:44]  *** Error codes and diagnostics ***
[2025-05-17 13:32:44]     "exeErrorCode": 0,
[2025-05-17 13:32:44]     "exeErrorDiag": "",
[2025-05-17 13:32:44]     "pilotErrorCode": 0,
[2025-05-17 13:32:44]     "pilotErrorDiag": "",
[2025-05-17 13:32:44]  *** Listing of results directory ***
[2025-05-17 13:32:44] total 407388
[2025-05-17 13:32:44] -rw-r--r--. 1 boincer umatlas    495897 May 17 09:14 pilot3.tar.gz
[2025-05-17 13:32:44] -rwx------. 1 boincer umatlas     37140 May 17 09:17 runpilot2-wrapper.sh
[2025-05-17 13:32:44] -rw-r--r--. 1 boincer umatlas      5111 May 17 09:17 queuedata.json
[2025-05-17 13:32:44] -rw-r--r--. 1 boincer umatlas       100 May 17 11:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 13:32:44] -rwxr-xr-x. 1 boincer umatlas      7986 May 17 11:57 run_atlas
[2025-05-17 13:32:44] -rw-r--r--. 1 boincer umatlas       105 May 17 11:57 job.xml
[2025-05-17 13:32:44] -rw-r--r--. 2 boincer umatlas 220347912 May 17 11:57 EVNT.44638096._000831.pool.root.1
[2025-05-17 13:32:44] -rw-r--r--. 2 boincer umatlas     17569 May 17 11:57 start_atlas.sh
[2025-05-17 13:32:44] drwxrwx--x. 2 boincer umatlas      4096 May 17 11:57 shared
[2025-05-17 13:32:44] -rw-r--r--. 2 boincer umatlas    508884 May 17 11:57 input.tar.gz
[2025-05-17 13:32:44] -rw-r--r--. 1 boincer umatlas         0 May 17 11:57 boinc_lockfile
[2025-05-17 13:32:44] -rw-r--r--. 1 boincer umatlas      2538 May 17 11:57 pandaJob.out
[2025-05-17 13:32:44] -rw-------. 1 boincer umatlas       467 May 17 11:57 setup.sh.local
[2025-05-17 13:32:44] -rw-------. 1 boincer umatlas    994619 May 17 11:57 agis_schedconf.cvmfs.json
[2025-05-17 13:32:44] -rw-------. 1 boincer umatlas   1596741 May 17 11:57 agis_ddmendpoints.agis.ALL.json
[2025-05-17 13:32:44] drwx------. 4 boincer umatlas      4096 May 17 11:58 pilot3
[2025-05-17 13:32:44] -rw-r--r--. 1 boincer umatlas      7159 May 17 13:27 init_data.xml
[2025-05-17 13:32:44] -rw-------. 1 boincer umatlas 191330422 May 17 13:30 HITS.44638099._056242.pool.root.1
[2025-05-17 13:32:44] -rw-r--r--. 1 boincer umatlas       530 May 17 13:30 boinc_task_state.xml
[2025-05-17 13:32:44] -rw-------. 1 boincer umatlas      1032 May 17 13:31 memory_monitor_summary.json
[2025-05-17 13:32:44] -rw-------. 1 boincer umatlas    307281 May 17 13:31 log.44638099._056242.job.log.tgz.1
[2025-05-17 13:32:44] -rw-------. 1 boincer umatlas        95 May 17 13:31 pilot_heartbeat.json
[2025-05-17 13:32:44] -rw-------. 1 boincer umatlas      7693 May 17 13:32 heartbeat.json
[2025-05-17 13:32:44] -rw-r--r--. 1 boincer umatlas        27 May 17 13:32 wrapper_checkpoint.txt
[2025-05-17 13:32:44] -rw-r--r--. 1 boincer umatlas      8192 May 17 13:32 boinc_mmap_file
[2025-05-17 13:32:44] -rw-------. 1 boincer umatlas      4748 May 17 13:32 pilotlog.txt
[2025-05-17 13:32:44] -rw-------. 1 boincer umatlas    515133 May 17 13:32 log.44638099._056242.job.log.1
[2025-05-17 13:32:44] -rw-------. 1 boincer umatlas       357 May 17 13:32 output.list
[2025-05-17 13:32:44] -rw-r--r--. 1 boincer umatlas       620 May 17 13:32 runtime_log
[2025-05-17 13:32:44] -rw-------. 1 boincer umatlas    839680 May 17 13:32 result.tar.gz
[2025-05-17 13:32:44] -rw-------. 1 boincer umatlas       651 May 17 13:32 vZVMDmIbWa7n9Rq4apOajLDm4fhM0noT9bVof3QYDm1dKKDmdNY4xn.diag
[2025-05-17 13:32:44] -rw-r--r--. 1 boincer umatlas     11413 May 17 13:32 runtime_log.err
[2025-05-17 13:32:44] -rw-r--r--. 1 boincer umatlas     22444 May 17 13:32 stderr.txt
[2025-05-17 13:32:44] HITS file was successfully produced:
[2025-05-17 13:32:44] -rw-------. 1 boincer umatlas 191330422 May 17 13:30 shared/HITS.pool.root.1
[2025-05-17 13:32:44]  *** Contents of shared directory: ***
[2025-05-17 13:32:44] total 403380
[2025-05-17 13:32:44] -rw-r--r--. 2 boincer umatlas 220347912 May 17 11:57 ATLAS.root_0
[2025-05-17 13:32:44] -rw-r--r--. 2 boincer umatlas     17569 May 17 11:57 start_atlas.sh
[2025-05-17 13:32:44] -rw-r--r--. 2 boincer umatlas    508884 May 17 11:57 input.tar.gz
[2025-05-17 13:32:44] -rw-------. 1 boincer umatlas 191330422 May 17 13:30 HITS.pool.root.1
[2025-05-17 13:32:44] -rw-------. 1 boincer umatlas    839680 May 17 13:32 result.tar.gz
13:32:45 (2331376): run_atlas exited; CPU time 27473.819542
13:32:45 (2331376): called boinc_finish(0)

</stderr_txt>
]]>

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