Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:08:51 (4102165): wrapper (7.7.26015): starting
11:08:51 (4102165): wrapper: running run_atlas (--nthreads 8)
[2025-05-17 11:08:51] Arguments: --nthreads 8
[2025-05-17 11:08:51] Threads: 8
[2025-05-17 11:08:51] Checking for CVMFS
[2025-05-17 11:08:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 11:08:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 11:08:52] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 11:08:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 11:08:52] 2.12.6.0 872076 7040 281064 146104 3 195 24890594 40960000 20542 16776704 1 23995583 99.578 28870356 26819 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-17 11:08:52] CVMFS is ok
[2025-05-17 11:08:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-17 11:08:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-17 11:08:52] Further information can be found at the LHC@home message board.
[2025-05-17 11:08:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 11:08:52] Checking for apptainer binary...
[2025-05-17 11:08:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 11:08:52] Running /usr/bin/apptainer --version
[2025-05-17 11:08:53] apptainer version 1.4.0-1.el9
[2025-05-17 11:08:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 11:08:53] c7-11-12.aglt2.org
[2025-05-17 11:08:53] apptainer works
[2025-05-17 11:08:53] Set ATHENA_PROC_NUMBER=8
[2025-05-17 11:08:53] Set ATHENA_CORE_NUMBER=8
[2025-05-17 11:08:53] Starting ATLAS job with PandaID=6653404492
[2025-05-17 11:08:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 14:46:39]  *** The last 200 lines of the pilot log: ***
[2025-05-17 14:46:39] 2025-05-17 18:46:17,123 | INFO     | mean x: 1747501069.7547169
[2025-05-17 14:46:39] 2025-05-17 18:46:17,123 | INFO     | mean y: 2006228.2877358492
[2025-05-17 14:46:39] 2025-05-17 18:46:17,123 | INFO     | -- intersect: -61479557789.376595
[2025-05-17 14:46:39] 2025-05-17 18:46:17,123 | INFO     | intersect: -61479557789.376595
[2025-05-17 14:46:39] 2025-05-17 18:46:17,123 | INFO     | chi2: 6.662377152181066
[2025-05-17 14:46:39] 2025-05-17 18:46:17,124 | INFO     | sum of square deviations: 2750614862.434795
[2025-05-17 14:46:39] 2025-05-17 18:46:17,125 | INFO     | sum of deviations: 125053867085.37682
[2025-05-17 14:46:39] 2025-05-17 18:46:17,157 | INFO     | mean x: 1747500917.2463768
[2025-05-17 14:46:39] 2025-05-17 18:46:17,157 | INFO     | mean y: 2021740.8357487922
[2025-05-17 14:46:39] 2025-05-17 18:46:17,157 | INFO     | -- intersect: -79446304675.70302
[2025-05-17 14:46:39] 2025-05-17 18:46:17,157 | INFO     | intersect: -79446304675.70302
[2025-05-17 14:46:39] 2025-05-17 18:46:17,158 | INFO     | chi2: 5.095035641884486
[2025-05-17 14:46:39] 2025-05-17 18:46:17,158 | INFO     | current chi2=5.095035641884486 (change=23.525259445624126 %)
[2025-05-17 14:46:39] 2025-05-17 18:46:17,158 | INFO     | right removable region: 206
[2025-05-17 14:46:39] 2025-05-17 18:46:17,158 | INFO     | sum of square deviations: 2750620353.913057
[2025-05-17 14:46:39] 2025-05-17 18:46:17,159 | INFO     | sum of deviations: 59762064483.56526
[2025-05-17 14:46:39] 2025-05-17 18:46:17,159 | INFO     | mean x: 1747501222.2608695
[2025-05-17 14:46:39] 2025-05-17 18:46:17,159 | INFO     | mean y: 2039155.9710144927
[2025-05-17 14:46:39] 2025-05-17 18:46:17,159 | INFO     | -- intersect: -37965498087.507195
[2025-05-17 14:46:39] 2025-05-17 18:46:17,159 | INFO     | intersect: -37965498087.507195
[2025-05-17 14:46:39] 2025-05-17 18:46:17,159 | INFO     | chi2: 4.12450726322868
[2025-05-17 14:46:39] 2025-05-17 18:46:17,159 | INFO     | current chi2=4.12450726322868 (change=38.092558121264005 %)
[2025-05-17 14:46:39] 2025-05-17 18:46:17,160 | INFO     | sum of square deviations: 2556079306.0643473
[2025-05-17 14:46:39] 2025-05-17 18:46:17,161 | INFO     | sum of deviations: 24915552381.43068
[2025-05-17 14:46:39] 2025-05-17 18:46:17,203 | INFO     | mean x: 1747501374.7673268
[2025-05-17 14:46:39] 2025-05-17 18:46:17,203 | INFO     | mean y: 2066486.5198019801
[2025-05-17 14:46:39] 2025-05-17 18:46:17,203 | INFO     | -- intersect: -17031818939.62408
[2025-05-17 14:46:39] 2025-05-17 18:46:17,203 | INFO     | intersect: -17031818939.62408
[2025-05-17 14:46:39] 2025-05-17 18:46:17,204 | INFO     | chi2: 2.6956517608130324
[2025-05-17 14:46:39] 2025-05-17 18:46:17,204 | INFO     | current chi2=2.6956517608130324 (change=34.64305943050114 %)
[2025-05-17 14:46:39] 2025-05-17 18:46:17,204 | INFO     | sum of square deviations: 2370933783.1979537
[2025-05-17 14:46:39] 2025-05-17 18:46:17,205 | INFO     | sum of deviations: -2321904021.050762
[2025-05-17 14:46:39] 2025-05-17 18:46:17,205 | INFO     | mean x: 1747501527.2741117
[2025-05-17 14:46:39] 2025-05-17 18:46:17,205 | INFO     | mean y: 2088830.8527918782
[2025-05-17 14:46:39] 2025-05-17 18:46:17,205 | INFO     | -- intersect: 1713452873.039261
[2025-05-17 14:46:39] 2025-05-17 18:46:17,205 | INFO     | intersect: 1713452873.039261
[2025-05-17 14:46:39] 2025-05-17 18:46:17,205 | INFO     | chi2: 1.736840688014266
[2025-05-17 14:46:39] 2025-05-17 18:46:17,206 | INFO     | current chi2=1.736840688014266 (change=35.568803312694236 %)
[2025-05-17 14:46:39] 2025-05-17 18:46:17,206 | INFO     | sum of square deviations: 2194951222.8125
[2025-05-17 14:46:39] 2025-05-17 18:46:17,207 | INFO     | sum of deviations: -7586949053.21874
[2025-05-17 14:46:39] 2025-05-17 18:46:17,207 | INFO     | mean x: 1747501679.78125
[2025-05-17 14:46:39] 2025-05-17 18:46:17,240 | INFO     | mean y: 2093350.6614583333
[2025-05-17 14:46:39] 2025-05-17 18:46:17,240 | INFO     | -- intersect: 6042412642.097062
[2025-05-17 14:46:39] 2025-05-17 18:46:17,240 | INFO     | intersect: 6042412642.097062
[2025-05-17 14:46:39] 2025-05-17 18:46:17,240 | INFO     | chi2: 1.6852022449148256
[2025-05-17 14:46:39] 2025-05-17 18:46:17,241 | INFO     | current chi2=1.6852022449148256 (change=2.973124907528432 %)
[2025-05-17 14:46:39] 2025-05-17 18:46:17,241 | INFO     | left removable region: 40
[2025-05-17 14:46:39] 2025-05-17 18:46:17,241 | INFO     | sum of square deviations: 1418585460.1927729
[2025-05-17 14:46:39] 2025-05-17 18:46:17,242 | INFO     | sum of deviations: 8674100793.686749
[2025-05-17 14:46:39] 2025-05-17 18:46:17,242 | INFO     | mean x: 1747502106.7831326
[2025-05-17 14:46:39] 2025-05-17 18:46:17,242 | INFO     | mean y: 2118607.6024096385
[2025-05-17 14:46:39] 2025-05-17 18:46:17,242 | INFO     | -- intersect: -10683180119.029823
[2025-05-17 14:46:39] 2025-05-17 18:46:17,242 | INFO     | intersect: -10683180119.029823
[2025-05-17 14:46:39] 2025-05-17 18:46:17,242 | INFO     | chi2: 0.058347695018202056
[2025-05-17 14:46:39] 2025-05-17 18:46:17,242 | INFO     | -- intersect: -10683180119.029823
[2025-05-17 14:46:39] 2025-05-17 18:46:17,242 | INFO     | current memory leak: 6.11 B/s (using 166 data points, chi2=0.06)
[2025-05-17 14:46:39] 2025-05-17 18:46:17,243 | INFO     | ..............................
[2025-05-17 14:46:39] 2025-05-17 18:46:17,243 | INFO     | . Timing measurements:
[2025-05-17 14:46:39] 2025-05-17 18:46:17,243 | INFO     | . get job = 0 s
[2025-05-17 14:46:39] 2025-05-17 18:46:17,243 | INFO     | . initial setup = 4 s
[2025-05-17 14:46:39] 2025-05-17 18:46:17,243 | INFO     | . payload setup = 20 s
[2025-05-17 14:46:39] 2025-05-17 18:46:17,243 | INFO     | . stage-in = 0 s
[2025-05-17 14:46:39] 2025-05-17 18:46:17,243 | INFO     | . payload execution = 12907 s
[2025-05-17 14:46:39] 2025-05-17 18:46:17,243 | INFO     | . stage-out = 7 s
[2025-05-17 14:46:39] 2025-05-17 18:46:17,243 | INFO     | . log creation = 1 s
[2025-05-17 14:46:39] 2025-05-17 18:46:17,243 | INFO     | ..............................
[2025-05-17 14:46:39] 2025-05-17 18:46:17,943 | INFO     | 
[2025-05-17 14:46:39] 2025-05-17 18:46:17,943 | INFO     | job summary report
[2025-05-17 14:46:39] 2025-05-17 18:46:17,943 | INFO     | --------------------------------------------------
[2025-05-17 14:46:39] 2025-05-17 18:46:17,943 | INFO     | PanDA job id: 6653404492
[2025-05-17 14:46:39] 2025-05-17 18:46:17,943 | INFO     | task id: 44638099
[2025-05-17 14:46:39] 2025-05-17 18:46:17,943 | INFO     | errors: (none)
[2025-05-17 14:46:39] 2025-05-17 18:46:17,943 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 14:46:39] 2025-05-17 18:46:17,944 | INFO     | pilot state: finished 
[2025-05-17 14:46:39] 2025-05-17 18:46:17,944 | INFO     | transexitcode: 0
[2025-05-17 14:46:39] 2025-05-17 18:46:17,944 | INFO     | exeerrorcode: 0
[2025-05-17 14:46:39] 2025-05-17 18:46:17,944 | INFO     | exeerrordiag: 
[2025-05-17 14:46:39] 2025-05-17 18:46:17,944 | INFO     | exitcode: 0
[2025-05-17 14:46:39] 2025-05-17 18:46:17,944 | INFO     | exitmsg: OK
[2025-05-17 14:46:39] 2025-05-17 18:46:17,944 | INFO     | cpuconsumptiontime: 43445 s
[2025-05-17 14:46:39] 2025-05-17 18:46:17,944 | INFO     | nevents: 400
[2025-05-17 14:46:39] 2025-05-17 18:46:17,944 | INFO     | neventsw: 0
[2025-05-17 14:46:39] 2025-05-17 18:46:17,944 | INFO     | pid: 4115325
[2025-05-17 14:46:39] 2025-05-17 18:46:17,944 | INFO     | pgrp: 4115325
[2025-05-17 14:46:39] 2025-05-17 18:46:17,944 | INFO     | corecount: 8
[2025-05-17 14:46:39] 2025-05-17 18:46:17,944 | INFO     | event service: False
[2025-05-17 14:46:39] 2025-05-17 18:46:17,944 | INFO     | sizes: {0: 2393712, 11: 2393712, 16: 2393946, 22: 2393974, 12932: 2423728, 12933: 2423727, 12940: 2432908, 12979: 2433022}
[2025-05-17 14:46:39] 2025-05-17 18:46:17,944 | INFO     | --------------------------------------------------
[2025-05-17 14:46:39] 2025-05-17 18:46:17,944 | INFO     | 
[2025-05-17 14:46:39] 2025-05-17 18:46:17,944 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-05-17 14:46:39] 2025-05-17 18:46:18,238 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 14:46:39] 2025-05-17 18:46:18,239 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 14:46:39] 2025-05-17 18:46:18,239 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 14:46:39] 2025-05-17 18:46:18,239 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 14:46:39] 2025-05-17 18:46:18,239 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 14:46:39] 2025-05-17 18:46:18,239 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 14:46:39] 2025-05-17 18:46:18,239 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 14:46:39] 2025-05-17 18:46:18,239 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 14:46:39] 2025-05-17 18:46:18,239 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 14:46:39] 2025-05-17 18:46:18,239 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 14:46:39] 2025-05-17 18:46:18,239 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 14:46:39] 2025-05-17 18:46:18,239 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 14:46:39] 2025-05-17 18:46:18,239 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 14:46:39] 2025-05-17 18:46:18,240 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 14:46:39] 2025-05-17 18:46:18,240 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 14:46:39] 2025-05-17 18:46:18,240 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 14:46:39] 2025-05-17 18:46:18,240 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 14:46:39] 2025-05-17 18:46:18,240 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 14:46:39] 2025-05-17 18:46:18,240 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 14:46:39] 2025-05-17 18:46:18,240 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 14:46:39] 2025-05-17 18:46:18,240 | INFO     | job 6653404492 has completed (purged errors)
[2025-05-17 14:46:39] 2025-05-17 18:46:18,240 | INFO     | overall cleanup function is called
[2025-05-17 14:46:39] 2025-05-17 18:46:19,266 | INFO     | --- collectZombieJob: --- 10, [4115325]
[2025-05-17 14:46:39] 2025-05-17 18:46:19,266 | INFO     | zombie collector waiting for pid 4115325
[2025-05-17 14:46:39] 2025-05-17 18:46:19,266 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 14:46:39] 2025-05-17 18:46:19,266 | INFO     | collected zombie processes
[2025-05-17 14:46:39] 2025-05-17 18:46:19,266 | INFO     | will attempt to kill all subprocesses of pid=4115325
[2025-05-17 14:46:39] 2025-05-17 18:46:22,124 | INFO     | process IDs to be killed: [4115325] (in reverse order)
[2025-05-17 14:46:39] 2025-05-17 18:46:23,888 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 14:46:39] 2025-05-17 18:46:23,888 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 14:46:39] 2025-05-17 18:46:24,021 | INFO     | did not find any defunct processes belonging to 4115325
[2025-05-17 14:46:39] 2025-05-17 18:46:24,206 | INFO     | did not find any defunct processes belonging to 4115325
[2025-05-17 14:46:39] 2025-05-17 18:46:24,207 | INFO     | ready for new job
[2025-05-17 14:46:39] 2025-05-17 18:46:24,207 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 14:46:39] 2025-05-17 18:46:24,209 | INFO     | **************************************
[2025-05-17 14:46:39] 2025-05-17 18:46:24,223 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 14:46:39] 2025-05-17 18:46:24,223 | INFO     | **************************************
[2025-05-17 14:46:39] 2025-05-17 18:46:24,223 | INFO     | 
[2025-05-17 14:46:39] 2025-05-17 18:46:24,239 | INFO     | architecture information:
[2025-05-17 14:46:39] 2025-05-17 18:46:24,278 | INFO     | executing command: cat /etc/os-release
[2025-05-17 14:46:39] 2025-05-17 18:46:24,475 | INFO     | cat /etc/os-release:
[2025-05-17 14:46:39] NAME="CentOS Linux"
[2025-05-17 14:46:39] VERSION="7 (Core)"
[2025-05-17 14:46:39] ID="centos"
[2025-05-17 14:46:39] ID_LIKE="rhel fedora"
[2025-05-17 14:46:39] VERSION_ID="7"
[2025-05-17 14:46:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 14:46:39] ANSI_COLOR="0;31"
[2025-05-17 14:46:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 14:46:39] HOME_URL="https://www.centos.org/"
[2025-05-17 14:46:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 14:46:39] 
[2025-05-17 14:46:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 14:46:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 14:46:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 14:46:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 14:46:39] 
[2025-05-17 14:46:39] 2025-05-17 18:46:24,475 | INFO     | **************************************
[2025-05-17 14:46:39] 2025-05-17 18:46:24,978 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-05-17 14:46:39] 2025-05-17 18:46:25,199 | INFO     | sufficient remaining disk space (84880130048 B)
[2025-05-17 14:46:39] 2025-05-17 18:46:25,200 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 14:46:39] 2025-05-17 18:46:25,200 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 14:46:39] 2025-05-17 18:46:25,200 | INFO     | update_server=False
[2025-05-17 14:46:39] 2025-05-17 18:46:25,200 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 14:46:39] 2025-05-17 18:46:25,212 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 14:46:39] 2025-05-17 18:46:25,545 | INFO     | all data control threads have been joined
[2025-05-17 14:46:39] 2025-05-17 18:46:25,955 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 14:46:39] 2025-05-17 18:46:25,959 | INFO     | aborting loop
[2025-05-17 14:46:39] 2025-05-17 18:46:26,123 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 14:46:39] 2025-05-17 18:46:26,206 | INFO     | [job] retrieve thread has finished
[2025-05-17 14:46:39] 2025-05-17 18:46:26,256 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 14:46:39] 2025-05-17 18:46:26,464 | INFO     | [payload] validate_post thread has finished
[2025-05-17 14:46:39] 2025-05-17 18:46:26,533 | INFO     | all payload control threads have been joined
[2025-05-17 14:46:39] 2025-05-17 18:46:26,533 | INFO     | all job control threads have been joined
[2025-05-17 14:46:39] 2025-05-17 18:46:26,568 | INFO     | [data] control thread has finished
[2025-05-17 14:46:39] 2025-05-17 18:46:26,616 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 14:46:39] 2025-05-17 18:46:26,617 | INFO     | [data] copytool_in thread has finished
[2025-05-17 14:46:39] 2025-05-17 18:46:26,834 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 14:46:39] 2025-05-17 18:46:27,004 | INFO     | [job] job monitor thread has finished
[2025-05-17 14:46:39] 2025-05-17 18:46:27,126 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 14:46:39] 2025-05-17 18:46:27,269 | INFO     | [data] copytool_out thread has finished
[2025-05-17 14:46:39] 2025-05-17 18:46:27,461 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 14:46:39] 2025-05-17 18:46:27,461 | INFO     | [job] validate thread has finished
[2025-05-17 14:46:39] 2025-05-17 18:46:27,565 | INFO     | [payload] control thread has finished
[2025-05-17 14:46:39] 2025-05-17 18:46:27,565 | INFO     | [job] control thread has finished
[2025-05-17 14:46:39] 2025-05-17 18:46:27,693 | INFO     | [payload] failed_post thread has finished
[2025-05-17 14:46:39] 2025-05-17 18:46:28,074 | INFO     | PID=4105842 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-17 14:46:39] 2025-05-17 18:46:28,074 | INFO     | .. there are 33 such processes running
[2025-05-17 14:46:39] 2025-05-17 18:46:28,074 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 14:46:39] 2025-05-17 18:46:28,074 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 14:46:39] 2025-05-17 18:46:28,074 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 14:46:39] 2025-05-17 18:46:28,132 | INFO     | [job] queue monitor thread has finished
[2025-05-17 14:46:39] 2025-05-17 18:46:30,140 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 14:46:39] 2025-05-17 18:46:30,812 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139744381069120)>', '<ExcThread(monitor, started 139744033875712)>']
[2025-05-17 14:46:39] 2025-05-17 18:46:31,095 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 14:46:39] 2025-05-17 18:46:31,099 | INFO     | [monitor] control thread has ended
[2025-05-17 14:46:39] 2025-05-17 18:46:35,838 | INFO     | all workflow threads have been joined
[2025-05-17 14:46:39] 2025-05-17 18:46:35,838 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 14:46:39] 2025-05-17 18:46:35,838 | INFO     | traces error code: 0
[2025-05-17 14:46:39] 2025-05-17 18:46:35,839 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 14:46:39] 2025-05-17 18:46:36,677 [wrapper] ==== pilot stdout END ====
[2025-05-17 14:46:39] 2025-05-17 18:46:36,717 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 14:46:39] 2025-05-17 18:46:36,758 [wrapper] pilotpid: 4105842
[2025-05-17 14:46:39] 2025-05-17 18:46:36,810 [wrapper] Pilot exit status: 0
[2025-05-17 14:46:39] 2025-05-17 18:46:37,024 [wrapper] pandaids: 6653404492
[2025-05-17 14:46:39] 2025-05-17 18:46:37,883 [wrapper] cleanup supervisor_pilot  894833 4105843
[2025-05-17 14:46:39] 2025-05-17 18:46:37,918 [wrapper] Test setup, not cleaning
[2025-05-17 14:46:39] 2025-05-17 18:46:37,973 [wrapper] apfmon messages muted
[2025-05-17 14:46:39] 2025-05-17 18:46:38,024 [wrapper] ==== wrapper stdout END ====
[2025-05-17 14:46:39] 2025-05-17 18:46:38,087 [wrapper] ==== wrapper stderr END ====
[2025-05-17 14:46:39]  *** Error codes and diagnostics ***
[2025-05-17 14:46:39]     "exeErrorCode": 0,
[2025-05-17 14:46:39]     "exeErrorDiag": "",
[2025-05-17 14:46:39]     "pilotErrorCode": 0,
[2025-05-17 14:46:39]     "pilotErrorDiag": "",
[2025-05-17 14:46:39]  *** Listing of results directory ***
[2025-05-17 14:46:39] total 423600
[2025-05-17 14:46:39] -rw-r--r--. 1 boincer umatlas    495897 May 17 08:25 pilot3.tar.gz
[2025-05-17 14:46:39] -rw-r--r--. 1 boincer umatlas      5111 May 17 08:35 queuedata.json
[2025-05-17 14:46:39] -rwx------. 1 boincer umatlas     37140 May 17 08:35 runpilot2-wrapper.sh
[2025-05-17 14:46:39] -rw-r--r--. 1 boincer umatlas       100 May 17 11:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 14:46:39] -rwxr-xr-x. 1 boincer umatlas      7986 May 17 11:08 run_atlas
[2025-05-17 14:46:39] -rw-r--r--. 1 boincer umatlas       105 May 17 11:08 job.xml
[2025-05-17 14:46:39] -rw-r--r--. 2 boincer umatlas 222182644 May 17 11:08 EVNT.44638096._002246.pool.root.1
[2025-05-17 14:46:39] -rw-r--r--. 2 boincer umatlas     17569 May 17 11:08 start_atlas.sh
[2025-05-17 14:46:39] drwxrwx--x. 2 boincer umatlas      4096 May 17 11:08 shared
[2025-05-17 14:46:39] -rw-r--r--. 2 boincer umatlas    508882 May 17 11:08 input.tar.gz
[2025-05-17 14:46:39] -rw-r--r--. 1 boincer umatlas         0 May 17 11:08 boinc_lockfile
[2025-05-17 14:46:39] -rw-r--r--. 1 boincer umatlas      2539 May 17 11:08 pandaJob.out
[2025-05-17 14:46:39] -rw-------. 1 boincer umatlas       467 May 17 11:08 setup.sh.local
[2025-05-17 14:46:39] -rw-------. 1 boincer umatlas    994619 May 17 11:09 agis_schedconf.cvmfs.json
[2025-05-17 14:46:39] drwx------. 4 boincer umatlas      4096 May 17 11:09 pilot3
[2025-05-17 14:46:39] -rw-r--r--. 1 boincer umatlas      6897 May 17 14:36 init_data.xml
[2025-05-17 14:46:39] -rw-------. 1 boincer umatlas 204701926 May 17 14:42 HITS.44638099._055758.pool.root.1
[2025-05-17 14:46:39] -rw-r--r--. 1 boincer umatlas       530 May 17 14:43 boinc_task_state.xml
[2025-05-17 14:46:39] -rw-------. 1 boincer umatlas      1031 May 17 14:45 memory_monitor_summary.json
[2025-05-17 14:46:39] -rw-------. 1 boincer umatlas        95 May 17 14:45 pilot_heartbeat.json
[2025-05-17 14:46:39] -rw-------. 1 boincer umatlas   1596741 May 17 14:45 agis_ddmendpoints.agis.ALL.json
[2025-05-17 14:46:39] -rw-------. 1 boincer umatlas    375501 May 17 14:45 log.44638099._055758.job.log.tgz.1
[2025-05-17 14:46:39] -rw-------. 1 boincer umatlas      7692 May 17 14:46 heartbeat.json
[2025-05-17 14:46:39] -rw-------. 1 boincer umatlas      4748 May 17 14:46 pilotlog.txt
[2025-05-17 14:46:39] -rw-r--r--. 1 boincer umatlas      8192 May 17 14:46 boinc_mmap_file
[2025-05-17 14:46:39] -rw-------. 1 boincer umatlas   1144906 May 17 14:46 log.44638099._055758.job.log.1
[2025-05-17 14:46:39] -rw-r--r--. 1 boincer umatlas        28 May 17 14:46 wrapper_checkpoint.txt
[2025-05-17 14:46:39] -rw-------. 1 boincer umatlas       357 May 17 14:46 output.list
[2025-05-17 14:46:39] -rw-r--r--. 1 boincer umatlas       620 May 17 14:46 runtime_log
[2025-05-17 14:46:39] -rw-------. 1 boincer umatlas   1536000 May 17 14:46 result.tar.gz
[2025-05-17 14:46:39] -rw-r--r--. 1 boincer umatlas     11419 May 17 14:46 runtime_log.err
[2025-05-17 14:46:39] -rw-------. 1 boincer umatlas       655 May 17 14:46 QrDMDmSwVa7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCWOKDmNZISbn.diag
[2025-05-17 14:46:39] -rw-r--r--. 1 boincer umatlas     20928 May 17 14:46 stderr.txt
[2025-05-17 14:46:39] HITS file was successfully produced:
[2025-05-17 14:46:39] -rw-------. 1 boincer umatlas 204701926 May 17 14:42 shared/HITS.pool.root.1
[2025-05-17 14:46:39]  *** Contents of shared directory: ***
[2025-05-17 14:46:39] total 418912
[2025-05-17 14:46:39] -rw-r--r--. 2 boincer umatlas 222182644 May 17 11:08 ATLAS.root_0
[2025-05-17 14:46:39] -rw-r--r--. 2 boincer umatlas     17569 May 17 11:08 start_atlas.sh
[2025-05-17 14:46:39] -rw-r--r--. 2 boincer umatlas    508882 May 17 11:08 input.tar.gz
[2025-05-17 14:46:39] -rw-------. 1 boincer umatlas 204701926 May 17 14:42 HITS.pool.root.1
[2025-05-17 14:46:39] -rw-------. 1 boincer umatlas   1536000 May 17 14:46 result.tar.gz
14:46:40 (4102165): run_atlas exited; CPU time 43631.485334
14:46:40 (4102165): called boinc_finish(0)

</stderr_txt>
]]>

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