Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
16:49:52 (308995): wrapper (7.7.26015): starting
16:49:52 (308995): wrapper: running run_atlas (--nthreads 3)
[2025-05-17 16:49:52] Arguments: --nthreads 3
[2025-05-17 16:49:52] Threads: 3
[2025-05-17 16:49:52] Checking for CVMFS
[2025-05-17 16:49:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 16:49:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 16:49:52] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 16:49:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 16:49:53] 2.9.2.0 7515 1209 73004 146104 0 56 2391112 36864001 0 130560 0 771285 99.182 958153 5290 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-05-17 16:49:53] CVMFS is ok
[2025-05-17 16:49:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-17 16:49:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-17 16:49:53] Further information can be found at the LHC@home message board.
[2025-05-17 16:49:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 16:49:53] Checking for apptainer binary...
[2025-05-17 16:49:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 16:49:53] Running /usr/bin/apptainer --version
[2025-05-17 16:49:53] apptainer version 1.3.6-6.1
[2025-05-17 16:49:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 16:49:53] pclinst
[2025-05-17 16:49:53] apptainer works
[2025-05-17 16:49:53] Set ATHENA_PROC_NUMBER=3
[2025-05-17 16:49:53] Set ATHENA_CORE_NUMBER=3
[2025-05-17 16:49:53] Starting ATLAS job with PandaID=6653397598
[2025-05-17 16:49:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 18:39:14]  *** The last 200 lines of the pilot log: ***
[2025-05-17 18:39:14] 2025-05-17 16:38:54,646 | INFO     | extracted standard info from prmon json
[2025-05-17 18:39:14] 2025-05-17 16:38:54,646 | INFO     | extracted standard memory fields from prmon json
[2025-05-17 18:39:14] 2025-05-17 16:38:54,647 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-17 18:39:14] 2025-05-17 16:38:54,647 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-17 18:39:14] 2025-05-17 16:38:54,647 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-17 18:39:14] 2025-05-17 16:38:54,647 | INFO     | fitting pss+swap vs Time
[2025-05-17 18:39:14] 2025-05-17 16:38:54,648 | INFO     | sum of square deviations: 379832238.0
[2025-05-17 18:39:14] 2025-05-17 16:38:54,648 | INFO     | sum of deviations: 24859176341.0
[2025-05-17 18:39:14] 2025-05-17 16:38:54,648 | INFO     | mean x: 1747496650.0
[2025-05-17 18:39:14] 2025-05-17 16:38:54,648 | INFO     | mean y: 2294123.429906542
[2025-05-17 18:39:14] 2025-05-17 16:38:54,648 | INFO     | -- intersect: -114367480296.97293
[2025-05-17 18:39:14] 2025-05-17 16:38:54,648 | INFO     | intersect: -114367480296.97293
[2025-05-17 18:39:14] 2025-05-17 16:38:54,648 | INFO     | chi2: 2.8687380035374495
[2025-05-17 18:39:14] 2025-05-17 16:38:54,648 | INFO     | sum of square deviations: 329031285.5
[2025-05-17 18:39:14] 2025-05-17 16:38:54,648 | INFO     | sum of deviations: 23928333116.0
[2025-05-17 18:39:14] 2025-05-17 16:38:54,648 | INFO     | mean x: 1747496497.5
[2025-05-17 18:39:14] 2025-05-17 16:38:54,648 | INFO     | mean y: 2291327.588235294
[2025-05-17 18:39:14] 2025-05-17 16:38:54,648 | INFO     | -- intersect: -127081910552.12408
[2025-05-17 18:39:14] 2025-05-17 16:38:54,648 | INFO     | intersect: -127081910552.12408
[2025-05-17 18:39:14] 2025-05-17 16:38:54,648 | INFO     | chi2: 2.870055586339699
[2025-05-17 18:39:14] 2025-05-17 16:38:54,648 | INFO     | current chi2=2.870055586339699 (change=-0.04592900434353526 %)
[2025-05-17 18:39:14] 2025-05-17 16:38:54,648 | INFO     | right removable region: 101
[2025-05-17 18:39:14] 2025-05-17 16:38:54,648 | INFO     | sum of square deviations: 329031285.5
[2025-05-17 18:39:14] 2025-05-17 16:38:54,649 | INFO     | sum of deviations: 4543155193.999998
[2025-05-17 18:39:14] 2025-05-17 16:38:54,649 | INFO     | mean x: 1747496802.5
[2025-05-17 18:39:14] 2025-05-17 16:38:54,649 | INFO     | mean y: 2354595.7843137253
[2025-05-17 18:39:14] 2025-05-17 16:38:54,649 | INFO     | -- intersect: -24126503432.751896
[2025-05-17 18:39:14] 2025-05-17 16:38:54,649 | INFO     | intersect: -24126503432.751896
[2025-05-17 18:39:14] 2025-05-17 16:38:54,649 | INFO     | chi2: 0.9360353897190565
[2025-05-17 18:39:14] 2025-05-17 16:38:54,649 | INFO     | current chi2=0.9360353897190565 (change=67.37117894471965 %)
[2025-05-17 18:39:14] 2025-05-17 16:38:54,649 | INFO     | sum of square deviations: 282974608.0
[2025-05-17 18:39:14] 2025-05-17 16:38:54,649 | INFO     | sum of deviations: -9522129158.0
[2025-05-17 18:39:14] 2025-05-17 16:38:54,649 | INFO     | mean x: 1747496955.0
[2025-05-17 18:39:14] 2025-05-17 16:38:54,649 | INFO     | mean y: 2401189.1649484537
[2025-05-17 18:39:14] 2025-05-17 16:38:54,649 | INFO     | -- intersect: 58805881212.79206
[2025-05-17 18:39:14] 2025-05-17 16:38:54,649 | INFO     | intersect: 58805881212.79206
[2025-05-17 18:39:14] 2025-05-17 16:38:54,649 | INFO     | chi2: 0.07769949529039107
[2025-05-17 18:39:14] 2025-05-17 16:38:54,649 | INFO     | current chi2=0.07769949529039107 (change=91.69908572434296 %)
[2025-05-17 18:39:14] 2025-05-17 16:38:54,649 | INFO     | sum of square deviations: 241429643.0
[2025-05-17 18:39:14] 2025-05-17 16:38:54,649 | INFO     | sum of deviations: -6164829366.500003
[2025-05-17 18:39:14] 2025-05-17 16:38:54,649 | INFO     | mean x: 1747497107.5
[2025-05-17 18:39:14] 2025-05-17 16:38:54,650 | INFO     | mean y: 2388890.9891304346
[2025-05-17 18:39:14] 2025-05-17 16:38:54,650 | INFO     | -- intersect: 44624173326.09187
[2025-05-17 18:39:14] 2025-05-17 16:38:54,650 | INFO     | intersect: 44624173326.09187
[2025-05-17 18:39:14] 2025-05-17 16:38:54,650 | INFO     | chi2: 0.058593924046749075
[2025-05-17 18:39:14] 2025-05-17 16:38:54,650 | INFO     | current chi2=0.058593924046749075 (change=24.589054500595626 %)
[2025-05-17 18:39:14] 2025-05-17 16:38:54,650 | INFO     | left removable region: 30
[2025-05-17 18:39:14] 2025-05-17 16:38:54,650 | INFO     | sum of square deviations: 110960220.0
[2025-05-17 18:39:14] 2025-05-17 16:38:54,650 | INFO     | sum of deviations: 217709914.99999994
[2025-05-17 18:39:14] 2025-05-17 16:38:54,650 | INFO     | mean x: 1747497382.0
[2025-05-17 18:39:14] 2025-05-17 16:38:54,650 | INFO     | mean y: 2361668.1971830986
[2025-05-17 18:39:14] 2025-05-17 16:38:54,650 | INFO     | -- intersect: -3426322111.430709
[2025-05-17 18:39:14] 2025-05-17 16:38:54,650 | INFO     | intersect: -3426322111.430709
[2025-05-17 18:39:14] 2025-05-17 16:38:54,650 | INFO     | chi2: 0.0030940550722154793
[2025-05-17 18:39:14] 2025-05-17 16:38:54,650 | INFO     | -- intersect: -3426322111.430709
[2025-05-17 18:39:14] 2025-05-17 16:38:54,650 | INFO     | current memory leak: 1.96 B/s (using 71 data points, chi2=0.00)
[2025-05-17 18:39:14] 2025-05-17 16:38:54,650 | INFO     | ..............................
[2025-05-17 18:39:14] 2025-05-17 16:38:54,650 | INFO     | . Timing measurements:
[2025-05-17 18:39:14] 2025-05-17 16:38:54,650 | INFO     | . get job = 0 s
[2025-05-17 18:39:14] 2025-05-17 16:38:54,650 | INFO     | . initial setup = 1 s
[2025-05-17 18:39:14] 2025-05-17 16:38:54,650 | INFO     | . payload setup = 2 s
[2025-05-17 18:39:14] 2025-05-17 16:38:54,650 | INFO     | . stage-in = 0 s
[2025-05-17 18:39:14] 2025-05-17 16:38:54,650 | INFO     | . payload execution = 6510 s
[2025-05-17 18:39:14] 2025-05-17 16:38:54,650 | INFO     | . stage-out = 0 s
[2025-05-17 18:39:14] 2025-05-17 16:38:54,650 | INFO     | . log creation = 0 s
[2025-05-17 18:39:14] 2025-05-17 16:38:54,650 | INFO     | ..............................
[2025-05-17 18:39:14] 2025-05-17 16:38:54,680 | INFO     | 
[2025-05-17 18:39:14] 2025-05-17 16:38:54,680 | INFO     | job summary report
[2025-05-17 18:39:14] 2025-05-17 16:38:54,680 | INFO     | --------------------------------------------------
[2025-05-17 18:39:14] 2025-05-17 16:38:54,680 | INFO     | PanDA job id: 6653397598
[2025-05-17 18:39:14] 2025-05-17 16:38:54,680 | INFO     | task id: 44638099
[2025-05-17 18:39:14] 2025-05-17 16:38:54,680 | INFO     | errors: (none)
[2025-05-17 18:39:14] 2025-05-17 16:38:54,680 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 18:39:14] 2025-05-17 16:38:54,680 | INFO     | pilot state: finished 
[2025-05-17 18:39:14] 2025-05-17 16:38:54,680 | INFO     | transexitcode: 0
[2025-05-17 18:39:14] 2025-05-17 16:38:54,680 | INFO     | exeerrorcode: 0
[2025-05-17 18:39:14] 2025-05-17 16:38:54,680 | INFO     | exeerrordiag: 
[2025-05-17 18:39:14] 2025-05-17 16:38:54,680 | INFO     | exitcode: 0
[2025-05-17 18:39:14] 2025-05-17 16:38:54,680 | INFO     | exitmsg: OK
[2025-05-17 18:39:14] 2025-05-17 16:38:54,680 | INFO     | cpuconsumptiontime: 17660 s
[2025-05-17 18:39:14] 2025-05-17 16:38:54,680 | INFO     | nevents: 400
[2025-05-17 18:39:14] 2025-05-17 16:38:54,680 | INFO     | neventsw: 0
[2025-05-17 18:39:14] 2025-05-17 16:38:54,680 | INFO     | pid: 319070
[2025-05-17 18:39:14] 2025-05-17 16:38:54,680 | INFO     | pgrp: 319070
[2025-05-17 18:39:14] 2025-05-17 16:38:54,681 | INFO     | corecount: 3
[2025-05-17 18:39:14] 2025-05-17 16:38:54,681 | INFO     | event service: False
[2025-05-17 18:39:14] 2025-05-17 16:38:54,681 | INFO     | sizes: {0: 2393663, 2: 2393869, 11: 2393897, 6517: 2420990, 6518: 2429993, 6523: 2430107}
[2025-05-17 18:39:14] 2025-05-17 16:38:54,681 | INFO     | --------------------------------------------------
[2025-05-17 18:39:14] 2025-05-17 16:38:54,681 | INFO     | 
[2025-05-17 18:39:14] 2025-05-17 16:38:54,681 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-05-17 18:39:14] 2025-05-17 16:38:54,692 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 18:39:14] 2025-05-17 16:38:54,693 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 18:39:14] 2025-05-17 16:38:54,693 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 18:39:14] 2025-05-17 16:38:54,693 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 18:39:14] 2025-05-17 16:38:54,693 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 18:39:14] 2025-05-17 16:38:54,693 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 18:39:14] 2025-05-17 16:38:54,693 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 18:39:14] 2025-05-17 16:38:54,693 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 18:39:14] 2025-05-17 16:38:54,693 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 18:39:14] 2025-05-17 16:38:54,693 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 18:39:14] 2025-05-17 16:38:54,693 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 18:39:14] 2025-05-17 16:38:54,693 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 18:39:14] 2025-05-17 16:38:54,693 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 18:39:14] 2025-05-17 16:38:54,693 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 18:39:14] 2025-05-17 16:38:54,693 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 18:39:14] 2025-05-17 16:38:54,693 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 18:39:14] 2025-05-17 16:38:54,693 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 18:39:14] 2025-05-17 16:38:54,693 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 18:39:14] 2025-05-17 16:38:54,693 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 18:39:14] 2025-05-17 16:38:54,693 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 18:39:14] 2025-05-17 16:38:54,693 | INFO     | job 6653397598 has completed (purged errors)
[2025-05-17 18:39:14] 2025-05-17 16:38:54,693 | INFO     | overall cleanup function is called
[2025-05-17 18:39:14] 2025-05-17 16:38:55,700 | INFO     | --- collectZombieJob: --- 10, [319070]
[2025-05-17 18:39:14] 2025-05-17 16:38:55,700 | INFO     | zombie collector waiting for pid 319070
[2025-05-17 18:39:14] 2025-05-17 16:38:55,700 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 18:39:14] 2025-05-17 16:38:55,700 | INFO     | collected zombie processes
[2025-05-17 18:39:14] 2025-05-17 16:38:55,700 | INFO     | will attempt to kill all subprocesses of pid=319070
[2025-05-17 18:39:14] 2025-05-17 16:38:55,742 | INFO     | process IDs to be killed: [319070] (in reverse order)
[2025-05-17 18:39:14] 2025-05-17 16:38:55,765 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 18:39:14] 2025-05-17 16:38:55,765 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 18:39:14] 2025-05-17 16:38:55,766 | INFO     | did not find any defunct processes belonging to 319070
[2025-05-17 18:39:14] 2025-05-17 16:38:55,767 | INFO     | did not find any defunct processes belonging to 319070
[2025-05-17 18:39:14] 2025-05-17 16:38:55,767 | INFO     | ready for new job
[2025-05-17 18:39:14] 2025-05-17 16:38:55,767 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 18:39:14] 2025-05-17 16:38:55,768 | INFO     | **************************************
[2025-05-17 18:39:14] 2025-05-17 16:38:55,768 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 18:39:14] 2025-05-17 16:38:55,768 | INFO     | **************************************
[2025-05-17 18:39:14] 2025-05-17 16:38:55,768 | INFO     | 
[2025-05-17 18:39:14] 2025-05-17 16:38:55,768 | INFO     | architecture information:
[2025-05-17 18:39:14] 2025-05-17 16:38:55,768 | INFO     | executing command: cat /etc/os-release
[2025-05-17 18:39:14] 2025-05-17 16:38:55,777 | INFO     | cat /etc/os-release:
[2025-05-17 18:39:14] NAME="CentOS Linux"
[2025-05-17 18:39:14] VERSION="7 (Core)"
[2025-05-17 18:39:14] ID="centos"
[2025-05-17 18:39:14] ID_LIKE="rhel fedora"
[2025-05-17 18:39:14] VERSION_ID="7"
[2025-05-17 18:39:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 18:39:14] ANSI_COLOR="0;31"
[2025-05-17 18:39:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 18:39:14] HOME_URL="https://www.centos.org/"
[2025-05-17 18:39:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 18:39:14] 
[2025-05-17 18:39:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 18:39:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 18:39:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 18:39:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 18:39:14] 
[2025-05-17 18:39:14] 2025-05-17 16:38:55,777 | INFO     | **************************************
[2025-05-17 18:39:14] 2025-05-17 16:38:56,280 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-05-17 18:39:14] 2025-05-17 16:38:56,293 | INFO     | sufficient remaining disk space (359727628288 B)
[2025-05-17 18:39:14] 2025-05-17 16:38:56,293 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 18:39:14] 2025-05-17 16:38:56,293 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 18:39:14] 2025-05-17 16:38:56,293 | INFO     | update_server=False
[2025-05-17 18:39:14] 2025-05-17 16:38:56,293 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 18:39:14] 2025-05-17 16:38:56,293 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 18:39:14] 2025-05-17 16:38:56,294 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-17 18:39:14] 2025-05-17 16:38:56,294 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 18:39:14] 2025-05-17 16:38:56,294 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 18:39:14] 2025-05-17 16:38:56,294 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 18:39:14] 2025-05-17 16:38:56,294 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 18:39:14] 2025-05-17 16:38:56,764 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 18:39:14] 2025-05-17 16:38:56,764 | INFO     | aborting loop
[2025-05-17 18:39:14] 2025-05-17 16:38:57,018 | INFO     | all job control threads have been joined
[2025-05-17 18:39:14] 2025-05-17 16:38:57,152 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 18:39:14] 2025-05-17 16:38:57,210 | INFO     | all data control threads have been joined
[2025-05-17 18:39:14] 2025-05-17 16:38:57,299 | INFO     | [job] retrieve thread has finished
[2025-05-17 18:39:14] 2025-05-17 16:38:57,299 | INFO     | [job] queue monitor thread has finished
[2025-05-17 18:39:14] 2025-05-17 16:38:57,345 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 18:39:14] 2025-05-17 16:38:57,364 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 18:39:14] 2025-05-17 16:38:57,532 | INFO     | all payload control threads have been joined
[2025-05-17 18:39:14] 2025-05-17 16:38:57,770 | INFO     | [job] job monitor thread has finished
[2025-05-17 18:39:14] 2025-05-17 16:38:57,950 | INFO     | [payload] failed_post thread has finished
[2025-05-17 18:39:14] 2025-05-17 16:38:58,024 | INFO     | [job] control thread has finished
[2025-05-17 18:39:14] 2025-05-17 16:38:58,103 | INFO     | [data] copytool_in thread has finished
[2025-05-17 18:39:14] 2025-05-17 16:38:58,192 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 18:39:14] 2025-05-17 16:38:58,216 | INFO     | [data] control thread has finished
[2025-05-17 18:39:14] 2025-05-17 16:38:58,537 | INFO     | [payload] control thread has finished
[2025-05-17 18:39:14] 2025-05-17 16:38:58,737 | INFO     | [job] validate thread has finished
[2025-05-17 18:39:14] 2025-05-17 16:38:58,822 | INFO     | [payload] validate_post thread has finished
[2025-05-17 18:39:14] 2025-05-17 16:38:59,159 | INFO     | [data] copytool_out thread has finished
[2025-05-17 18:39:14] 2025-05-17 16:39:00,300 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 18:39:14] 2025-05-17 16:39:07,206 | INFO     | job.realtimelogging is not enabled
[2025-05-17 18:39:14] 2025-05-17 16:39:08,212 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 18:39:14] 2025-05-17 16:39:08,999 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140086490408768)>', '<ExcThread(monitor, started 140086209382144)>']
[2025-05-17 18:39:14] 2025-05-17 16:39:09,363 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 18:39:14] 2025-05-17 16:39:09,363 | INFO     | [monitor] control thread has ended
[2025-05-17 18:39:14] 2025-05-17 16:39:14,025 | INFO     | all workflow threads have been joined
[2025-05-17 18:39:14] 2025-05-17 16:39:14,025 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 18:39:14] 2025-05-17 16:39:14,025 | INFO     | traces error code: 0
[2025-05-17 18:39:14] 2025-05-17 16:39:14,026 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 18:39:14] 2025-05-17 16:39:14,076 [wrapper] ==== pilot stdout END ====
[2025-05-17 18:39:14] 2025-05-17 16:39:14,079 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 18:39:14] 2025-05-17 16:39:14,082 [wrapper] pilotpid: 312644
[2025-05-17 18:39:14] 2025-05-17 16:39:14,084 [wrapper] Pilot exit status: 0
[2025-05-17 18:39:14] 2025-05-17 16:39:14,091 [wrapper] pandaids: 6653397598
[2025-05-17 18:39:14] 2025-05-17 16:39:14,106 [wrapper] cleanup supervisor_pilot  333538 312645
[2025-05-17 18:39:14] 2025-05-17 16:39:14,108 [wrapper] Test setup, not cleaning
[2025-05-17 18:39:14] 2025-05-17 16:39:14,110 [wrapper] apfmon messages muted
[2025-05-17 18:39:14] 2025-05-17 16:39:14,113 [wrapper] ==== wrapper stdout END ====
[2025-05-17 18:39:14] 2025-05-17 16:39:14,115 [wrapper] ==== wrapper stderr END ====
[2025-05-17 18:39:14]  *** Error codes and diagnostics ***
[2025-05-17 18:39:14]     "exeErrorCode": 0,
[2025-05-17 18:39:14]     "exeErrorDiag": "",
[2025-05-17 18:39:14]     "pilotErrorCode": 0,
[2025-05-17 18:39:14]     "pilotErrorDiag": "",
[2025-05-17 18:39:14]  *** Listing of results directory ***
[2025-05-17 18:39:14] total 414488
[2025-05-17 18:39:14] -rw-r--r-- 1 boinc boinc    495897 May 17 10:55 pilot3.tar.gz
[2025-05-17 18:39:14] -rwx------ 1 boinc boinc     37140 May 17 11:04 runpilot2-wrapper.sh
[2025-05-17 18:39:14] -rw-r--r-- 1 boinc boinc      5111 May 17 11:04 queuedata.json
[2025-05-17 18:39:14] -rw-r--r-- 1 boinc boinc       100 May 17 16:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 18:39:14] -rwxr-xr-x 1 boinc boinc      7986 May 17 16:49 run_atlas
[2025-05-17 18:39:14] -rw-r--r-- 1 boinc boinc       105 May 17 16:49 job.xml
[2025-05-17 18:39:14] -rw-r--r-- 2 boinc boinc 221260551 May 17 16:49 EVNT.44638096._002131.pool.root.1
[2025-05-17 18:39:14] -rw-r--r-- 1 boinc boinc      6915 May 17 16:49 init_data.xml
[2025-05-17 18:39:14] drwxrwx--x 2 boinc boinc      4096 May 17 16:49 shared
[2025-05-17 18:39:14] -rw-r--r-- 2 boinc boinc    508880 May 17 16:49 input.tar.gz
[2025-05-17 18:39:14] -rw-r--r-- 2 boinc boinc     17569 May 17 16:49 start_atlas.sh
[2025-05-17 18:39:14] -rw-r--r-- 1 boinc boinc         0 May 17 16:49 boinc_lockfile
[2025-05-17 18:39:14] -rw-r--r-- 1 boinc boinc      2538 May 17 16:49 pandaJob.out
[2025-05-17 18:39:14] -rw------- 1 boinc boinc       424 May 17 16:49 setup.sh.local
[2025-05-17 18:39:14] -rw------- 1 boinc boinc    994619 May 17 16:49 agis_schedconf.cvmfs.json
[2025-05-17 18:39:14] -rw------- 1 boinc boinc   1596741 May 17 16:49 agis_ddmendpoints.agis.ALL.json
[2025-05-17 18:39:14] drwx------ 4 boinc boinc      4096 May 17 16:49 pilot3
[2025-05-17 18:39:14] -rw------- 1 boinc boinc        95 May 17 18:38 pilot_heartbeat.json
[2025-05-17 18:39:14] -rw------- 1 boinc boinc 197633901 May 17 18:38 HITS.44638099._053281.pool.root.1
[2025-05-17 18:39:14] -rw-r--r-- 1 boinc boinc       529 May 17 18:38 boinc_task_state.xml
[2025-05-17 18:39:14] -rw------- 1 boinc boinc      1021 May 17 18:38 memory_monitor_summary.json
[2025-05-17 18:39:14] -rw------- 1 boinc boinc    229159 May 17 18:38 log.44638099._053281.job.log.tgz.1
[2025-05-17 18:39:14] -rw------- 1 boinc boinc      7659 May 17 18:38 heartbeat.json
[2025-05-17 18:39:14] -rw-r--r-- 1 boinc boinc      8192 May 17 18:38 boinc_mmap_file
[2025-05-17 18:39:14] -rw-r--r-- 1 boinc boinc        27 May 17 18:38 wrapper_checkpoint.txt
[2025-05-17 18:39:14] -rw------- 1 boinc boinc      4552 May 17 18:39 pilotlog.txt
[2025-05-17 18:39:14] -rw------- 1 boinc boinc    621087 May 17 18:39 log.44638099._053281.job.log.1
[2025-05-17 18:39:14] -rw------- 1 boinc boinc       357 May 17 18:39 output.list
[2025-05-17 18:39:14] -rw-r--r-- 1 boinc boinc       620 May 17 18:39 runtime_log
[2025-05-17 18:39:14] -rw------- 1 boinc boinc    870400 May 17 18:39 result.tar.gz
[2025-05-17 18:39:14] -rw------- 1 boinc boinc       660 May 17 18:39 xj6MDmWeSa7n9Rq4apOajLDm4fhM0noT9bVof3QYDmQIKKDmA2u7nn.diag
[2025-05-17 18:39:14] -rw-r--r-- 1 boinc boinc     11104 May 17 18:39 runtime_log.err
[2025-05-17 18:39:14] -rw-r--r-- 1 boinc boinc     20734 May 17 18:39 stderr.txt
[2025-05-17 18:39:14] HITS file was successfully produced:
[2025-05-17 18:39:14] -rw------- 1 boinc boinc 197633901 May 17 18:38 shared/HITS.pool.root.1
[2025-05-17 18:39:14]  *** Contents of shared directory: ***
[2025-05-17 18:39:14] total 410456
[2025-05-17 18:39:14] -rw-r--r-- 2 boinc boinc 221260551 May 17 16:49 ATLAS.root_0
[2025-05-17 18:39:14] -rw-r--r-- 2 boinc boinc    508880 May 17 16:49 input.tar.gz
[2025-05-17 18:39:14] -rw-r--r-- 2 boinc boinc     17569 May 17 16:49 start_atlas.sh
[2025-05-17 18:39:14] -rw------- 1 boinc boinc 197633901 May 17 18:38 HITS.pool.root.1
[2025-05-17 18:39:14] -rw------- 1 boinc boinc    870400 May 17 18:39 result.tar.gz
18:39:15 (308995): run_atlas exited; CPU time 17684.666144
18:39:15 (308995): called boinc_finish(0)

</stderr_txt>
]]>

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