Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:43:14 (2239533): wrapper (7.7.26015): starting
10:43:14 (2239533): wrapper: running run_atlas (--nthreads 8)
[2025-05-17 10:43:14] Arguments: --nthreads 8
[2025-05-17 10:43:14] Threads: 8
[2025-05-17 10:43:14] Checking for CVMFS
[2025-05-17 10:43:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 10:43:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 10:43:15] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 10:43:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 10:43:16] 2.12.6.0 10250 5618 259328 146104 0 195 31074142 32935937 27348 16776704 1 26132545 99.607 27052011 27396 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-17 10:43:16] CVMFS is ok
[2025-05-17 10:43:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-17 10:43:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-17 10:43:16] Further information can be found at the LHC@home message board.
[2025-05-17 10:43:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 10:43:16] Checking for apptainer binary...
[2025-05-17 10:43:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 10:43:16] Running /usr/bin/apptainer --version
[2025-05-17 10:43:16] apptainer version 1.4.0-1.el9
[2025-05-17 10:43:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 10:43:16] c6-12-29-2.aglt2.org
[2025-05-17 10:43:16] apptainer works
[2025-05-17 10:43:16] Set ATHENA_PROC_NUMBER=8
[2025-05-17 10:43:16] Set ATHENA_CORE_NUMBER=8
[2025-05-17 10:43:17] Starting ATLAS job with PandaID=6653403048
[2025-05-17 10:43:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 14:08:43]  *** The last 200 lines of the pilot log: ***
[2025-05-17 14:08:43] 2025-05-17 18:08:29,968 | INFO     | mean x: 1747499090.6649485
[2025-05-17 14:08:43] 2025-05-17 18:08:29,968 | INFO     | mean y: 2057911.8917525774
[2025-05-17 14:08:43] 2025-05-17 18:08:29,968 | INFO     | -- intersect: -101734438942.5975
[2025-05-17 14:08:43] 2025-05-17 18:08:29,969 | INFO     | intersect: -101734438942.5975
[2025-05-17 14:08:43] 2025-05-17 18:08:29,969 | INFO     | chi2: 6.015242800184158
[2025-05-17 14:08:43] 2025-05-17 18:08:29,969 | INFO     | current chi2=6.015242800184158 (change=11.683294740571066 %)
[2025-05-17 14:08:43] 2025-05-17 18:08:29,969 | INFO     | right removable region: 193
[2025-05-17 14:08:43] 2025-05-17 18:08:29,969 | INFO     | sum of square deviations: 2263932523.5464005
[2025-05-17 14:08:43] 2025-05-17 18:08:29,971 | INFO     | sum of deviations: 76149355678.27827
[2025-05-17 14:08:43] 2025-05-17 18:08:29,971 | INFO     | mean x: 1747499395.6597939
[2025-05-17 14:08:43] 2025-05-17 18:08:29,971 | INFO     | mean y: 2090781.9587628867
[2025-05-17 14:08:43] 2025-05-17 18:08:29,971 | INFO     | -- intersect: -58776583778.19167
[2025-05-17 14:08:43] 2025-05-17 18:08:29,971 | INFO     | intersect: -58776583778.19167
[2025-05-17 14:08:43] 2025-05-17 18:08:29,971 | INFO     | chi2: 3.631544394293037
[2025-05-17 14:08:43] 2025-05-17 18:08:29,972 | INFO     | current chi2=3.631544394293037 (change=46.68111553244527 %)
[2025-05-17 14:08:43] 2025-05-17 18:08:29,972 | INFO     | sum of square deviations: 2093343125.9153342
[2025-05-17 14:08:43] 2025-05-17 18:08:29,973 | INFO     | sum of deviations: 43996951647.40208
[2025-05-17 14:08:43] 2025-05-17 18:08:29,973 | INFO     | mean x: 1747499548.1640213
[2025-05-17 14:08:43] 2025-05-17 18:08:29,973 | INFO     | mean y: 2119502.470899471
[2025-05-17 14:08:43] 2025-05-17 18:08:29,973 | INFO     | -- intersect: -36726046163.54282
[2025-05-17 14:08:43] 2025-05-17 18:08:29,974 | INFO     | intersect: -36726046163.54282
[2025-05-17 14:08:43] 2025-05-17 18:08:29,974 | INFO     | chi2: 2.333089684637707
[2025-05-17 14:08:43] 2025-05-17 18:08:29,974 | INFO     | current chi2=2.333089684637707 (change=35.75489017002927 %)
[2025-05-17 14:08:43] 2025-05-17 18:08:29,974 | INFO     | sum of square deviations: 1931544590.7771742
[2025-05-17 14:08:43] 2025-05-17 18:08:29,975 | INFO     | sum of deviations: 13851254635.26631
[2025-05-17 14:08:43] 2025-05-17 18:08:29,976 | INFO     | mean x: 1747499700.6684783
[2025-05-17 14:08:43] 2025-05-17 18:08:29,976 | INFO     | mean y: 2147920.2010869565
[2025-05-17 14:08:43] 2025-05-17 18:08:29,976 | INFO     | -- intersect: -12529306670.382103
[2025-05-17 14:08:43] 2025-05-17 18:08:29,976 | INFO     | intersect: -12529306670.382103
[2025-05-17 14:08:43] 2025-05-17 18:08:29,976 | INFO     | chi2: 1.1538405146585045
[2025-05-17 14:08:43] 2025-05-17 18:08:29,976 | INFO     | current chi2=1.1538405146585045 (change=50.54452804553554 %)
[2025-05-17 14:08:43] 2025-05-17 18:08:29,977 | INFO     | sum of square deviations: 1778304355.6312823
[2025-05-17 14:08:43] 2025-05-17 18:08:29,978 | INFO     | sum of deviations: 979678843.6815643
[2025-05-17 14:08:43] 2025-05-17 18:08:29,978 | INFO     | mean x: 1747499853.1731844
[2025-05-17 14:08:43] 2025-05-17 18:08:29,978 | INFO     | mean y: 2160611.558659218
[2025-05-17 14:08:43] 2025-05-17 18:08:29,978 | INFO     | -- intersect: -960547841.6198565
[2025-05-17 14:08:43] 2025-05-17 18:08:29,978 | INFO     | intersect: -960547841.6198565
[2025-05-17 14:08:43] 2025-05-17 18:08:29,978 | INFO     | chi2: 0.860925080506203
[2025-05-17 14:08:43] 2025-05-17 18:08:29,979 | INFO     | current chi2=0.860925080506203 (change=25.386128362722122 %)
[2025-05-17 14:08:43] 2025-05-17 18:08:29,979 | INFO     | sum of square deviations: 1633411328.6666677
[2025-05-17 14:08:43] 2025-05-17 18:08:29,980 | INFO     | sum of deviations: 311832218.33332825
[2025-05-17 14:08:43] 2025-05-17 18:08:29,980 | INFO     | mean x: 1747500005.6666667
[2025-05-17 14:08:43] 2025-05-17 18:08:29,980 | INFO     | mean y: 2161307.8505747127
[2025-05-17 14:08:43] 2025-05-17 18:08:29,981 | INFO     | -- intersect: -331451416.4773243
[2025-05-17 14:08:43] 2025-05-17 18:08:29,981 | INFO     | intersect: -331451416.4773243
[2025-05-17 14:08:43] 2025-05-17 18:08:29,981 | INFO     | chi2: 0.8609926317263509
[2025-05-17 14:08:43] 2025-05-17 18:08:29,981 | INFO     | current chi2=0.8609926317263509 (change=-0.007846352914725224 %)
[2025-05-17 14:08:43] 2025-05-17 18:08:29,981 | INFO     | left removable region: 50
[2025-05-17 14:08:43] 2025-05-17 18:08:29,981 | INFO     | sum of square deviations: 906672787.3006989
[2025-05-17 14:08:43] 2025-05-17 18:08:29,982 | INFO     | sum of deviations: 5873557877.447553
[2025-05-17 14:08:43] 2025-05-17 18:08:29,982 | INFO     | mean x: 1747500585.160839
[2025-05-17 14:08:43] 2025-05-17 18:08:29,982 | INFO     | mean y: 2178805.937062937
[2025-05-17 14:08:43] 2025-05-17 18:08:29,982 | INFO     | -- intersect: -11318383553.029573
[2025-05-17 14:08:43] 2025-05-17 18:08:29,982 | INFO     | intersect: -11318383553.029573
[2025-05-17 14:08:43] 2025-05-17 18:08:29,983 | INFO     | chi2: 0.0361301105725765
[2025-05-17 14:08:43] 2025-05-17 18:08:29,983 | INFO     | -- intersect: -11318383553.029573
[2025-05-17 14:08:43] 2025-05-17 18:08:29,983 | INFO     | current memory leak: 6.48 B/s (using 143 data points, chi2=0.04)
[2025-05-17 14:08:43] 2025-05-17 18:08:29,984 | INFO     | ..............................
[2025-05-17 14:08:43] 2025-05-17 18:08:29,984 | INFO     | . Timing measurements:
[2025-05-17 14:08:43] 2025-05-17 18:08:29,984 | INFO     | . get job = 0 s
[2025-05-17 14:08:43] 2025-05-17 18:08:29,984 | INFO     | . initial setup = 6 s
[2025-05-17 14:08:43] 2025-05-17 18:08:29,984 | INFO     | . payload setup = 45 s
[2025-05-17 14:08:43] 2025-05-17 18:08:29,984 | INFO     | . stage-in = 0 s
[2025-05-17 14:08:43] 2025-05-17 18:08:29,984 | INFO     | . payload execution = 12123 s
[2025-05-17 14:08:43] 2025-05-17 18:08:29,984 | INFO     | . stage-out = 2 s
[2025-05-17 14:08:43] 2025-05-17 18:08:29,984 | INFO     | . log creation = 0 s
[2025-05-17 14:08:43] 2025-05-17 18:08:29,984 | INFO     | ..............................
[2025-05-17 14:08:43] 2025-05-17 18:08:30,087 | INFO     | 
[2025-05-17 14:08:43] 2025-05-17 18:08:30,088 | INFO     | job summary report
[2025-05-17 14:08:43] 2025-05-17 18:08:30,088 | INFO     | --------------------------------------------------
[2025-05-17 14:08:43] 2025-05-17 18:08:30,088 | INFO     | PanDA job id: 6653403048
[2025-05-17 14:08:43] 2025-05-17 18:08:30,088 | INFO     | task id: 44638099
[2025-05-17 14:08:43] 2025-05-17 18:08:30,088 | INFO     | errors: (none)
[2025-05-17 14:08:43] 2025-05-17 18:08:30,088 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 14:08:43] 2025-05-17 18:08:30,088 | INFO     | pilot state: finished 
[2025-05-17 14:08:43] 2025-05-17 18:08:30,088 | INFO     | transexitcode: 0
[2025-05-17 14:08:43] 2025-05-17 18:08:30,088 | INFO     | exeerrorcode: 0
[2025-05-17 14:08:43] 2025-05-17 18:08:30,088 | INFO     | exeerrordiag: 
[2025-05-17 14:08:43] 2025-05-17 18:08:30,089 | INFO     | exitcode: 0
[2025-05-17 14:08:43] 2025-05-17 18:08:30,089 | INFO     | exitmsg: OK
[2025-05-17 14:08:43] 2025-05-17 18:08:30,089 | INFO     | cpuconsumptiontime: 56386 s
[2025-05-17 14:08:43] 2025-05-17 18:08:30,089 | INFO     | nevents: 400
[2025-05-17 14:08:43] 2025-05-17 18:08:30,089 | INFO     | neventsw: 0
[2025-05-17 14:08:43] 2025-05-17 18:08:30,089 | INFO     | pid: 2256519
[2025-05-17 14:08:43] 2025-05-17 18:08:30,089 | INFO     | pgrp: 2256519
[2025-05-17 14:08:43] 2025-05-17 18:08:30,089 | INFO     | corecount: 8
[2025-05-17 14:08:43] 2025-05-17 18:08:30,089 | INFO     | event service: False
[2025-05-17 14:08:43] 2025-05-17 18:08:30,089 | INFO     | sizes: {0: 2393541, 1: 2393569, 2: 2393569, 3: 2393740, 14: 2393768, 24: 2393796, 30: 2394158, 35: 2394186, 12172: 2423826, 12175: 2432795, 12176: 2432851, 12180: 
[2025-05-17 14:08:43] 2025-05-17 18:08:30,089 | INFO     | --------------------------------------------------
[2025-05-17 14:08:43] 2025-05-17 18:08:30,089 | INFO     | 
[2025-05-17 14:08:43] 2025-05-17 18:08:30,089 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-05-17 14:08:43] 2025-05-17 18:08:30,111 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 14:08:43] 2025-05-17 18:08:30,111 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 14:08:43] 2025-05-17 18:08:30,111 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 14:08:43] 2025-05-17 18:08:30,111 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 14:08:43] 2025-05-17 18:08:30,111 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 14:08:43] 2025-05-17 18:08:30,111 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 14:08:43] 2025-05-17 18:08:30,112 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 14:08:43] 2025-05-17 18:08:30,112 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 14:08:43] 2025-05-17 18:08:30,112 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 14:08:43] 2025-05-17 18:08:30,112 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 14:08:43] 2025-05-17 18:08:30,112 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 14:08:43] 2025-05-17 18:08:30,112 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 14:08:43] 2025-05-17 18:08:30,112 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 14:08:43] 2025-05-17 18:08:30,112 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 14:08:43] 2025-05-17 18:08:30,112 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 14:08:43] 2025-05-17 18:08:30,112 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 14:08:43] 2025-05-17 18:08:30,112 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 14:08:43] 2025-05-17 18:08:30,112 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 14:08:43] 2025-05-17 18:08:30,113 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 14:08:43] 2025-05-17 18:08:30,113 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 14:08:43] 2025-05-17 18:08:30,113 | INFO     | job 6653403048 has completed (purged errors)
[2025-05-17 14:08:43] 2025-05-17 18:08:30,113 | INFO     | overall cleanup function is called
[2025-05-17 14:08:43] 2025-05-17 18:08:31,121 | INFO     | --- collectZombieJob: --- 10, [2256519]
[2025-05-17 14:08:43] 2025-05-17 18:08:31,122 | INFO     | zombie collector waiting for pid 2256519
[2025-05-17 14:08:43] 2025-05-17 18:08:31,122 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 14:08:43] 2025-05-17 18:08:31,123 | INFO     | collected zombie processes
[2025-05-17 14:08:43] 2025-05-17 18:08:31,123 | INFO     | will attempt to kill all subprocesses of pid=2256519
[2025-05-17 14:08:43] 2025-05-17 18:08:31,606 | INFO     | process IDs to be killed: [2256519] (in reverse order)
[2025-05-17 14:08:43] 2025-05-17 18:08:31,728 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 14:08:43] 2025-05-17 18:08:31,729 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 14:08:43] 2025-05-17 18:08:31,746 | INFO     | did not find any defunct processes belonging to 2256519
[2025-05-17 14:08:43] 2025-05-17 18:08:31,762 | INFO     | did not find any defunct processes belonging to 2256519
[2025-05-17 14:08:43] 2025-05-17 18:08:31,763 | INFO     | ready for new job
[2025-05-17 14:08:43] 2025-05-17 18:08:31,763 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 14:08:43] 2025-05-17 18:08:31,764 | INFO     | **************************************
[2025-05-17 14:08:43] 2025-05-17 18:08:31,765 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 14:08:43] 2025-05-17 18:08:31,765 | INFO     | **************************************
[2025-05-17 14:08:43] 2025-05-17 18:08:31,765 | INFO     | 
[2025-05-17 14:08:43] 2025-05-17 18:08:31,782 | INFO     | architecture information:
[2025-05-17 14:08:43] 2025-05-17 18:08:31,782 | INFO     | executing command: cat /etc/os-release
[2025-05-17 14:08:43] 2025-05-17 18:08:31,797 | INFO     | cat /etc/os-release:
[2025-05-17 14:08:43] NAME="CentOS Linux"
[2025-05-17 14:08:43] VERSION="7 (Core)"
[2025-05-17 14:08:43] ID="centos"
[2025-05-17 14:08:43] ID_LIKE="rhel fedora"
[2025-05-17 14:08:43] VERSION_ID="7"
[2025-05-17 14:08:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 14:08:43] ANSI_COLOR="0;31"
[2025-05-17 14:08:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 14:08:43] HOME_URL="https://www.centos.org/"
[2025-05-17 14:08:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 14:08:43] 
[2025-05-17 14:08:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 14:08:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 14:08:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 14:08:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 14:08:43] 
[2025-05-17 14:08:43] 2025-05-17 18:08:31,797 | INFO     | **************************************
[2025-05-17 14:08:43] 2025-05-17 18:08:32,300 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-05-17 14:08:43] 2025-05-17 18:08:32,318 | INFO     | sufficient remaining disk space (93548707840 B)
[2025-05-17 14:08:43] 2025-05-17 18:08:32,318 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 14:08:43] 2025-05-17 18:08:32,318 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 14:08:43] 2025-05-17 18:08:32,318 | INFO     | update_server=False
[2025-05-17 14:08:43] 2025-05-17 18:08:32,318 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 14:08:43] 2025-05-17 18:08:32,319 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-17 14:08:43] 2025-05-17 18:08:32,319 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 14:08:43] 2025-05-17 18:08:32,319 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 14:08:43] 2025-05-17 18:08:32,319 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 14:08:43] 2025-05-17 18:08:32,320 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 14:08:43] 2025-05-17 18:08:32,491 | INFO     | all data control threads have been joined
[2025-05-17 14:08:43] 2025-05-17 18:08:32,601 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 14:08:43] 2025-05-17 18:08:32,733 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 14:08:43] 2025-05-17 18:08:32,733 | INFO     | aborting loop
[2025-05-17 14:08:43] 2025-05-17 18:08:33,324 | INFO     | [job] retrieve thread has finished
[2025-05-17 14:08:43] 2025-05-17 18:08:33,413 | INFO     | [data] copytool_in thread has finished
[2025-05-17 14:08:43] 2025-05-17 18:08:33,489 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 14:08:43] 2025-05-17 18:08:33,495 | INFO     | all payload control threads have been joined
[2025-05-17 14:08:43] 2025-05-17 18:08:33,496 | INFO     | [data] control thread has finished
[2025-05-17 14:08:43] 2025-05-17 18:08:33,502 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 14:08:43] 2025-05-17 18:08:33,514 | INFO     | all job control threads have been joined
[2025-05-17 14:08:43] 2025-05-17 18:08:33,738 | INFO     | [job] job monitor thread has finished
[2025-05-17 14:08:43] 2025-05-17 18:08:33,958 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 14:08:43] 2025-05-17 18:08:34,233 | INFO     | [payload] validate_post thread has finished
[2025-05-17 14:08:43] 2025-05-17 18:08:34,500 | INFO     | [payload] control thread has finished
[2025-05-17 14:08:43] 2025-05-17 18:08:34,519 | INFO     | [job] control thread has finished
[2025-05-17 14:08:43] 2025-05-17 18:08:34,573 | INFO     | [payload] failed_post thread has finished
[2025-05-17 14:08:43] 2025-05-17 18:08:34,604 | INFO     | [data] copytool_out thread has finished
[2025-05-17 14:08:43] 2025-05-17 18:08:34,696 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 14:08:43] 2025-05-17 18:08:34,820 | INFO     | [job] validate thread has finished
[2025-05-17 14:08:43] 2025-05-17 18:08:35,094 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 14:08:43] 2025-05-17 18:08:36,099 | INFO     | [job] queue monitor thread has finished
[2025-05-17 14:08:43] 2025-05-17 18:08:36,329 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 14:08:43] 2025-05-17 18:08:37,741 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140016380663616)>', '<ExcThread(monitor, started 140016026101504)>']
[2025-05-17 14:08:43] 2025-05-17 18:08:38,352 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 14:08:43] 2025-05-17 18:08:38,352 | INFO     | [monitor] control thread has ended
[2025-05-17 14:08:43] 2025-05-17 18:08:42,767 | INFO     | all workflow threads have been joined
[2025-05-17 14:08:43] 2025-05-17 18:08:42,767 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 14:08:43] 2025-05-17 18:08:42,767 | INFO     | traces error code: 0
[2025-05-17 14:08:43] 2025-05-17 18:08:42,767 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 14:08:43] 2025-05-17 18:08:42,919 [wrapper] ==== pilot stdout END ====
[2025-05-17 14:08:43] 2025-05-17 18:08:42,922 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 14:08:43] 2025-05-17 18:08:42,924 [wrapper] pilotpid: 2244753
[2025-05-17 14:08:43] 2025-05-17 18:08:42,926 [wrapper] Pilot exit status: 0
[2025-05-17 14:08:43] 2025-05-17 18:08:42,936 [wrapper] pandaids: 6653403048
[2025-05-17 14:08:43] 2025-05-17 18:08:43,014 [wrapper] cleanup supervisor_pilot 3317077 2244754
[2025-05-17 14:08:43] 2025-05-17 18:08:43,017 [wrapper] Test setup, not cleaning
[2025-05-17 14:08:43] 2025-05-17 18:08:43,019 [wrapper] apfmon messages muted
[2025-05-17 14:08:43] 2025-05-17 18:08:43,022 [wrapper] ==== wrapper stdout END ====
[2025-05-17 14:08:43] 2025-05-17 18:08:43,024 [wrapper] ==== wrapper stderr END ====
[2025-05-17 14:08:43]  *** Error codes and diagnostics ***
[2025-05-17 14:08:43]     "exeErrorCode": 0,
[2025-05-17 14:08:43]     "exeErrorDiag": "",
[2025-05-17 14:08:43]     "pilotErrorCode": 0,
[2025-05-17 14:08:43]     "pilotErrorDiag": "",
[2025-05-17 14:08:43]  *** Listing of results directory ***
[2025-05-17 14:08:43] total 415508
[2025-05-17 14:08:43] -rw-r--r--. 1 boincer umatlas    495897 May 17 07:48 pilot3.tar.gz
[2025-05-17 14:08:43] -rw-r--r--. 1 boincer umatlas      5111 May 17 07:56 queuedata.json
[2025-05-17 14:08:43] -rwx------. 1 boincer umatlas     37140 May 17 07:57 runpilot2-wrapper.sh
[2025-05-17 14:08:43] -rw-r--r--. 1 boincer umatlas       100 May 17 10:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 14:08:43] -rwxr-xr-x. 1 boincer umatlas      7986 May 17 10:43 run_atlas
[2025-05-17 14:08:43] -rw-r--r--. 1 boincer umatlas       105 May 17 10:43 job.xml
[2025-05-17 14:08:43] -rw-r--r--. 2 boincer umatlas 219611519 May 17 10:43 EVNT.44638096._002190.pool.root.1
[2025-05-17 14:08:43] -rw-r--r--. 2 boincer umatlas     17569 May 17 10:43 start_atlas.sh
[2025-05-17 14:08:43] drwxrwx--x. 2 boincer umatlas      4096 May 17 10:43 shared
[2025-05-17 14:08:43] -rw-r--r--. 2 boincer umatlas    508878 May 17 10:43 input.tar.gz
[2025-05-17 14:08:43] -rw-r--r--. 1 boincer umatlas         0 May 17 10:43 boinc_lockfile
[2025-05-17 14:08:43] -rw-r--r--. 1 boincer umatlas      2539 May 17 10:43 pandaJob.out
[2025-05-17 14:08:43] -rw-------. 1 boincer umatlas       467 May 17 10:43 setup.sh.local
[2025-05-17 14:08:43] -rw-------. 1 boincer umatlas    994619 May 17 10:44 agis_schedconf.cvmfs.json
[2025-05-17 14:08:43] drwx------. 4 boincer umatlas      4096 May 17 10:44 pilot3
[2025-05-17 14:08:43] -rw-r--r--. 1 boincer umatlas      6858 May 17 14:00 init_data.xml
[2025-05-17 14:08:43] -rw-------. 1 boincer umatlas 199151062 May 17 14:07 HITS.44638099._055308.pool.root.1
[2025-05-17 14:08:43] -rw-r--r--. 1 boincer umatlas       530 May 17 14:07 boinc_task_state.xml
[2025-05-17 14:08:43] -rw-------. 1 boincer umatlas        95 May 17 14:08 pilot_heartbeat.json
[2025-05-17 14:08:43] -rw-------. 1 boincer umatlas      1042 May 17 14:08 memory_monitor_summary.json
[2025-05-17 14:08:43] -rw-------. 1 boincer umatlas   1596741 May 17 14:08 agis_ddmendpoints.agis.ALL.json
[2025-05-17 14:08:43] -rw-------. 1 boincer umatlas    367238 May 17 14:08 log.44638099._055308.job.log.tgz.1
[2025-05-17 14:08:43] -rw-------. 1 boincer umatlas      7728 May 17 14:08 heartbeat.json
[2025-05-17 14:08:43] -rw-r--r--. 1 boincer umatlas        28 May 17 14:08 wrapper_checkpoint.txt
[2025-05-17 14:08:43] -rw-r--r--. 1 boincer umatlas      8192 May 17 14:08 boinc_mmap_file
[2025-05-17 14:08:43] -rw-------. 1 boincer umatlas      4476 May 17 14:08 pilotlog.txt
[2025-05-17 14:08:43] -rw-------. 1 boincer umatlas   1071399 May 17 14:08 log.44638099._055308.job.log.1
[2025-05-17 14:08:43] -rw-------. 1 boincer umatlas       357 May 17 14:08 output.list
[2025-05-17 14:08:43] -rw-r--r--. 1 boincer umatlas       620 May 17 14:08 runtime_log
[2025-05-17 14:08:43] -rw-------. 1 boincer umatlas   1454080 May 17 14:08 result.tar.gz
[2025-05-17 14:08:43] -rw-r--r--. 1 boincer umatlas     11429 May 17 14:08 runtime_log.err
[2025-05-17 14:08:43] -rw-------. 1 boincer umatlas       656 May 17 14:08 JQuLDmQLVa7n9Rq4apOajLDm4fhM0noT9bVof3QYDmXZKKDmoo9MNm.diag
[2025-05-17 14:08:43] -rw-r--r--. 1 boincer umatlas     20919 May 17 14:08 stderr.txt
[2025-05-17 14:08:43] HITS file was successfully produced:
[2025-05-17 14:08:43] -rw-------. 1 boincer umatlas 199151062 May 17 14:07 shared/HITS.pool.root.1
[2025-05-17 14:08:43]  *** Contents of shared directory: ***
[2025-05-17 14:08:43] total 410900
[2025-05-17 14:08:43] -rw-r--r--. 2 boincer umatlas 219611519 May 17 10:43 ATLAS.root_0
[2025-05-17 14:08:43] -rw-r--r--. 2 boincer umatlas     17569 May 17 10:43 start_atlas.sh
[2025-05-17 14:08:43] -rw-r--r--. 2 boincer umatlas    508878 May 17 10:43 input.tar.gz
[2025-05-17 14:08:43] -rw-------. 1 boincer umatlas 199151062 May 17 14:07 HITS.pool.root.1
[2025-05-17 14:08:43] -rw-------. 1 boincer umatlas   1454080 May 17 14:08 result.tar.gz
14:08:44 (2239533): run_atlas exited; CPU time 57012.345145
14:08:44 (2239533): called boinc_finish(0)

</stderr_txt>
]]>

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