Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:06:02 (1816150): wrapper (7.7.26015): starting
10:06:02 (1816150): wrapper: running run_atlas (--nthreads 8)
[2025-05-17 10:06:02] Arguments: --nthreads 8
[2025-05-17 10:06:02] Threads: 8
[2025-05-17 10:06:02] Checking for CVMFS
[2025-05-17 10:06:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 10:06:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 10:06:03] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 10:06:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 10:06:04] 2.12.6.0 5013 11489 402280 146102 0 260 32823616 32935937 39794 16776704 0 145163861 99.587 158556808 37422 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-17 10:06:04] CVMFS is ok
[2025-05-17 10:06:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-17 10:06:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-17 10:06:04] Further information can be found at the LHC@home message board.
[2025-05-17 10:06:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 10:06:04] Checking for apptainer binary...
[2025-05-17 10:06:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 10:06:04] Running /usr/bin/apptainer --version
[2025-05-17 10:06:04] apptainer version 1.4.0-1.el9
[2025-05-17 10:06:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 10:06:04] c7-9-15.aglt2.org
[2025-05-17 10:06:04] apptainer works
[2025-05-17 10:06:04] Set ATHENA_PROC_NUMBER=8
[2025-05-17 10:06:04] Set ATHENA_CORE_NUMBER=8
[2025-05-17 10:06:04] Starting ATLAS job with PandaID=6653401666
[2025-05-17 10:06:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 12:40:23]  *** The last 200 lines of the pilot log: ***
[2025-05-17 12:40:23] 2025-05-17 16:40:01,760 | INFO     | mean y: 1956572.0
[2025-05-17 12:40:23] 2025-05-17 16:40:01,760 | INFO     | -- intersect: -208496064884.0006
[2025-05-17 12:40:23] 2025-05-17 16:40:01,760 | INFO     | intersect: -208496064884.0006
[2025-05-17 12:40:23] 2025-05-17 16:40:01,760 | INFO     | chi2: 8.481064075539663
[2025-05-17 12:40:23] 2025-05-17 16:40:01,761 | INFO     | current chi2=8.481064075539663 (change=9.275705974110418 %)
[2025-05-17 12:40:23] 2025-05-17 16:40:01,761 | INFO     | right removable region: 143
[2025-05-17 12:40:23] 2025-05-17 16:40:01,761 | INFO     | sum of square deviations: 925872219.6597219
[2025-05-17 12:40:23] 2025-05-17 16:40:01,761 | INFO     | sum of deviations: 68018475896.1597
[2025-05-17 12:40:23] 2025-05-17 16:40:01,761 | INFO     | mean x: 1747495593.5486112
[2025-05-17 12:40:23] 2025-05-17 16:40:01,761 | INFO     | mean y: 2007403.048611111
[2025-05-17 12:40:23] 2025-05-17 16:40:01,761 | INFO     | -- intersect: -128376384760.09012
[2025-05-17 12:40:23] 2025-05-17 16:40:01,761 | INFO     | intersect: -128376384760.09012
[2025-05-17 12:40:23] 2025-05-17 16:40:01,761 | INFO     | chi2: 5.269253347214526
[2025-05-17 12:40:23] 2025-05-17 16:40:01,761 | INFO     | current chi2=5.269253347214526 (change=43.63333589845865 %)
[2025-05-17 12:40:23] 2025-05-17 16:40:01,762 | INFO     | sum of square deviations: 832733454.6474824
[2025-05-17 12:40:23] 2025-05-17 16:40:01,762 | INFO     | sum of deviations: 41219799822.07913
[2025-05-17 12:40:23] 2025-05-17 16:40:01,762 | INFO     | mean x: 1747495746.0503597
[2025-05-17 12:40:23] 2025-05-17 16:40:01,762 | INFO     | mean y: 2051245.417266187
[2025-05-17 12:40:23] 2025-05-17 16:40:01,762 | INFO     | -- intersect: -86497925956.31943
[2025-05-17 12:40:23] 2025-05-17 16:40:01,762 | INFO     | intersect: -86497925956.31943
[2025-05-17 12:40:23] 2025-05-17 16:40:01,762 | INFO     | chi2: 3.452155485879724
[2025-05-17 12:40:23] 2025-05-17 16:40:01,762 | INFO     | current chi2=3.452155485879724 (change=34.48492113774281 %)
[2025-05-17 12:40:23] 2025-05-17 16:40:01,763 | INFO     | sum of square deviations: 746059927.1343291
[2025-05-17 12:40:23] 2025-05-17 16:40:01,763 | INFO     | sum of deviations: 19239740193.582092
[2025-05-17 12:40:23] 2025-05-17 16:40:01,763 | INFO     | mean x: 1747495898.5522387
[2025-05-17 12:40:23] 2025-05-17 16:40:01,763 | INFO     | mean y: 2089909.5597014925
[2025-05-17 12:40:23] 2025-05-17 16:40:01,763 | INFO     | -- intersect: -45063146614.585884
[2025-05-17 12:40:23] 2025-05-17 16:40:01,763 | INFO     | intersect: -45063146614.585884
[2025-05-17 12:40:23] 2025-05-17 16:40:01,763 | INFO     | chi2: 2.2053140487315073
[2025-05-17 12:40:23] 2025-05-17 16:40:01,763 | INFO     | current chi2=2.2053140487315073 (change=36.11776590736266 %)
[2025-05-17 12:40:23] 2025-05-17 16:40:01,763 | INFO     | sum of square deviations: 665619074.6201546
[2025-05-17 12:40:23] 2025-05-17 16:40:01,786 | INFO     | sum of deviations: -555792915.542635
[2025-05-17 12:40:23] 2025-05-17 16:40:01,786 | INFO     | mean x: 1747496051.0542636
[2025-05-17 12:40:23] 2025-05-17 16:40:01,786 | INFO     | mean y: 2127361.07751938
[2025-05-17 12:40:23] 2025-05-17 16:40:01,786 | INFO     | -- intersect: 1461289158.189398
[2025-05-17 12:40:23] 2025-05-17 16:40:01,786 | INFO     | intersect: 1461289158.189398
[2025-05-17 12:40:23] 2025-05-17 16:40:01,786 | INFO     | chi2: 1.1121226788053349
[2025-05-17 12:40:23] 2025-05-17 16:40:01,786 | INFO     | current chi2=1.1121226788053349 (change=49.570779751526736 %)
[2025-05-17 12:40:23] 2025-05-17 16:40:01,787 | INFO     | sum of square deviations: 591178334.6048379
[2025-05-17 12:40:23] 2025-05-17 16:40:01,787 | INFO     | sum of deviations: -7571384577.290323
[2025-05-17 12:40:23] 2025-05-17 16:40:01,787 | INFO     | mean x: 1747496203.5564516
[2025-05-17 12:40:23] 2025-05-17 16:40:01,787 | INFO     | mean y: 2141568.6129032257
[2025-05-17 12:40:23] 2025-05-17 16:40:01,787 | INFO     | -- intersect: 22382809177.693504
[2025-05-17 12:40:23] 2025-05-17 16:40:01,787 | INFO     | intersect: 22382809177.693504
[2025-05-17 12:40:23] 2025-05-17 16:40:01,787 | INFO     | chi2: 0.9185971517855168
[2025-05-17 12:40:23] 2025-05-17 16:40:01,787 | INFO     | current chi2=0.9185971517855168 (change=17.401454957083256 %)
[2025-05-17 12:40:23] 2025-05-17 16:40:01,787 | INFO     | left removable region: 50
[2025-05-17 12:40:23] 2025-05-17 16:40:01,787 | INFO     | sum of square deviations: 249404481.82795686
[2025-05-17 12:40:23] 2025-05-17 16:40:01,788 | INFO     | sum of deviations: 3669854095.60215
[2025-05-17 12:40:23] 2025-05-17 16:40:01,788 | INFO     | mean x: 1747496783.0430107
[2025-05-17 12:40:23] 2025-05-17 16:40:01,788 | INFO     | mean y: 2145088.8494623657
[2025-05-17 12:40:23] 2025-05-17 16:40:01,788 | INFO     | -- intersect: -25711339205.012604
[2025-05-17 12:40:23] 2025-05-17 16:40:01,788 | INFO     | intersect: -25711339205.012604
[2025-05-17 12:40:23] 2025-05-17 16:40:01,788 | INFO     | chi2: 0.04639708310912695
[2025-05-17 12:40:23] 2025-05-17 16:40:01,788 | INFO     | -- intersect: -25711339205.012604
[2025-05-17 12:40:23] 2025-05-17 16:40:01,788 | INFO     | current memory leak: 14.71 B/s (using 93 data points, chi2=0.05)
[2025-05-17 12:40:23] 2025-05-17 16:40:01,788 | INFO     | ..............................
[2025-05-17 12:40:23] 2025-05-17 16:40:01,789 | INFO     | . Timing measurements:
[2025-05-17 12:40:23] 2025-05-17 16:40:01,789 | INFO     | . get job = 0 s
[2025-05-17 12:40:23] 2025-05-17 16:40:01,789 | INFO     | . initial setup = 7 s
[2025-05-17 12:40:23] 2025-05-17 16:40:01,789 | INFO     | . payload setup = 48 s
[2025-05-17 12:40:23] 2025-05-17 16:40:01,789 | INFO     | . stage-in = 0 s
[2025-05-17 12:40:23] 2025-05-17 16:40:01,789 | INFO     | . payload execution = 9067 s
[2025-05-17 12:40:23] 2025-05-17 16:40:01,789 | INFO     | . stage-out = 3 s
[2025-05-17 12:40:23] 2025-05-17 16:40:01,789 | INFO     | . log creation = 0 s
[2025-05-17 12:40:23] 2025-05-17 16:40:01,789 | INFO     | ..............................
[2025-05-17 12:40:23] 2025-05-17 16:40:02,287 | INFO     | 
[2025-05-17 12:40:23] 2025-05-17 16:40:02,287 | INFO     | job summary report
[2025-05-17 12:40:23] 2025-05-17 16:40:02,287 | INFO     | --------------------------------------------------
[2025-05-17 12:40:23] 2025-05-17 16:40:02,287 | INFO     | PanDA job id: 6653401666
[2025-05-17 12:40:23] 2025-05-17 16:40:02,287 | INFO     | task id: 44638099
[2025-05-17 12:40:23] 2025-05-17 16:40:02,287 | INFO     | errors: (none)
[2025-05-17 12:40:23] 2025-05-17 16:40:02,287 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 12:40:23] 2025-05-17 16:40:02,287 | INFO     | pilot state: finished 
[2025-05-17 12:40:23] 2025-05-17 16:40:02,287 | INFO     | transexitcode: 0
[2025-05-17 12:40:23] 2025-05-17 16:40:02,287 | INFO     | exeerrorcode: 0
[2025-05-17 12:40:23] 2025-05-17 16:40:02,287 | INFO     | exeerrordiag: 
[2025-05-17 12:40:23] 2025-05-17 16:40:02,287 | INFO     | exitcode: 0
[2025-05-17 12:40:23] 2025-05-17 16:40:02,287 | INFO     | exitmsg: OK
[2025-05-17 12:40:23] 2025-05-17 16:40:02,287 | INFO     | cpuconsumptiontime: 27662 s
[2025-05-17 12:40:23] 2025-05-17 16:40:02,287 | INFO     | nevents: 400
[2025-05-17 12:40:23] 2025-05-17 16:40:02,288 | INFO     | neventsw: 0
[2025-05-17 12:40:23] 2025-05-17 16:40:02,288 | INFO     | pid: 1853042
[2025-05-17 12:40:23] 2025-05-17 16:40:02,288 | INFO     | pgrp: 1853042
[2025-05-17 12:40:23] 2025-05-17 16:40:02,288 | INFO     | corecount: 8
[2025-05-17 12:40:23] 2025-05-17 16:40:02,288 | INFO     | event service: False
[2025-05-17 12:40:23] 2025-05-17 16:40:02,288 | INFO     | sizes: {0: 2393435, 1: 2393690, 11: 2393690, 17: 2393924, 22: 2393952, 9120: 2422108, 9125: 2431049, 9128: 2431105, 9157: 2431275}
[2025-05-17 12:40:23] 2025-05-17 16:40:02,288 | INFO     | --------------------------------------------------
[2025-05-17 12:40:23] 2025-05-17 16:40:02,288 | INFO     | 
[2025-05-17 12:40:23] 2025-05-17 16:40:02,288 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-05-17 12:40:23] 2025-05-17 16:40:02,417 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 12:40:23] 2025-05-17 16:40:02,417 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 12:40:23] 2025-05-17 16:40:02,417 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 12:40:23] 2025-05-17 16:40:02,417 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 12:40:23] 2025-05-17 16:40:02,417 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 12:40:23] 2025-05-17 16:40:02,418 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 12:40:23] 2025-05-17 16:40:02,418 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 12:40:23] 2025-05-17 16:40:02,418 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 12:40:23] 2025-05-17 16:40:02,418 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 12:40:23] 2025-05-17 16:40:02,418 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 12:40:23] 2025-05-17 16:40:02,418 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 12:40:23] 2025-05-17 16:40:02,418 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 12:40:23] 2025-05-17 16:40:02,418 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 12:40:23] 2025-05-17 16:40:02,418 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 12:40:23] 2025-05-17 16:40:02,418 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 12:40:23] 2025-05-17 16:40:02,418 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 12:40:23] 2025-05-17 16:40:02,418 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 12:40:23] 2025-05-17 16:40:02,418 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 12:40:23] 2025-05-17 16:40:02,418 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 12:40:23] 2025-05-17 16:40:02,418 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 12:40:23] 2025-05-17 16:40:02,418 | INFO     | job 6653401666 has completed (purged errors)
[2025-05-17 12:40:23] 2025-05-17 16:40:02,418 | INFO     | overall cleanup function is called
[2025-05-17 12:40:23] 2025-05-17 16:40:03,452 | INFO     | --- collectZombieJob: --- 10, [1853042]
[2025-05-17 12:40:23] 2025-05-17 16:40:03,452 | INFO     | zombie collector waiting for pid 1853042
[2025-05-17 12:40:23] 2025-05-17 16:40:03,452 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 12:40:23] 2025-05-17 16:40:03,452 | INFO     | collected zombie processes
[2025-05-17 12:40:23] 2025-05-17 16:40:03,452 | INFO     | will attempt to kill all subprocesses of pid=1853042
[2025-05-17 12:40:23] 2025-05-17 16:40:05,638 | INFO     | process IDs to be killed: [1853042] (in reverse order)
[2025-05-17 12:40:23] 2025-05-17 16:40:06,387 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 12:40:23] 2025-05-17 16:40:06,387 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 12:40:23] 2025-05-17 16:40:06,535 | INFO     | did not find any defunct processes belonging to 1853042
[2025-05-17 12:40:23] 2025-05-17 16:40:06,885 | INFO     | did not find any defunct processes belonging to 1853042
[2025-05-17 12:40:23] 2025-05-17 16:40:06,886 | INFO     | ready for new job
[2025-05-17 12:40:23] 2025-05-17 16:40:06,886 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 12:40:23] 2025-05-17 16:40:06,958 | INFO     | **************************************
[2025-05-17 12:40:23] 2025-05-17 16:40:06,958 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 12:40:23] 2025-05-17 16:40:06,958 | INFO     | **************************************
[2025-05-17 12:40:23] 2025-05-17 16:40:06,958 | INFO     | 
[2025-05-17 12:40:23] 2025-05-17 16:40:07,044 | INFO     | architecture information:
[2025-05-17 12:40:23] 2025-05-17 16:40:07,050 | INFO     | executing command: cat /etc/os-release
[2025-05-17 12:40:23] 2025-05-17 16:40:07,119 | INFO     | cat /etc/os-release:
[2025-05-17 12:40:23] NAME="CentOS Linux"
[2025-05-17 12:40:23] VERSION="7 (Core)"
[2025-05-17 12:40:23] ID="centos"
[2025-05-17 12:40:23] ID_LIKE="rhel fedora"
[2025-05-17 12:40:23] VERSION_ID="7"
[2025-05-17 12:40:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 12:40:23] ANSI_COLOR="0;31"
[2025-05-17 12:40:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 12:40:23] HOME_URL="https://www.centos.org/"
[2025-05-17 12:40:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 12:40:23] 
[2025-05-17 12:40:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 12:40:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 12:40:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 12:40:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 12:40:23] 
[2025-05-17 12:40:23] 2025-05-17 16:40:07,119 | INFO     | **************************************
[2025-05-17 12:40:23] 2025-05-17 16:40:07,623 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-05-17 12:40:23] 2025-05-17 16:40:07,729 | INFO     | sufficient remaining disk space (72813117440 B)
[2025-05-17 12:40:23] 2025-05-17 16:40:07,729 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 12:40:23] 2025-05-17 16:40:07,730 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 12:40:23] 2025-05-17 16:40:07,730 | INFO     | update_server=False
[2025-05-17 12:40:23] 2025-05-17 16:40:07,730 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 12:40:23] 2025-05-17 16:40:07,785 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 12:40:23] 2025-05-17 16:40:07,965 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 12:40:23] 2025-05-17 16:40:07,965 | INFO     | aborting loop
[2025-05-17 12:40:23] 2025-05-17 16:40:08,104 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 12:40:23] 2025-05-17 16:40:08,296 | INFO     | all payload control threads have been joined
[2025-05-17 12:40:23] 2025-05-17 16:40:08,489 | INFO     | all data control threads have been joined
[2025-05-17 12:40:23] 2025-05-17 16:40:08,498 | INFO     | all job control threads have been joined
[2025-05-17 12:40:23] 2025-05-17 16:40:08,809 | INFO     | [job] queue monitor thread has finished
[2025-05-17 12:40:23] 2025-05-17 16:40:08,822 | INFO     | [job] retrieve thread has finished
[2025-05-17 12:40:23] 2025-05-17 16:40:08,866 | INFO     | [data] copytool_in thread has finished
[2025-05-17 12:40:23] 2025-05-17 16:40:08,983 | INFO     | [job] job monitor thread has finished
[2025-05-17 12:40:23] 2025-05-17 16:40:09,302 | INFO     | [payload] control thread has finished
[2025-05-17 12:40:23] 2025-05-17 16:40:09,476 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 12:40:23] 2025-05-17 16:40:09,478 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 12:40:23] 2025-05-17 16:40:09,497 | INFO     | [data] control thread has finished
[2025-05-17 12:40:23] 2025-05-17 16:40:09,535 | INFO     | [job] control thread has finished
[2025-05-17 12:40:23] 2025-05-17 16:40:09,679 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 12:40:23] 2025-05-17 16:40:09,679 | INFO     | [job] validate thread has finished
[2025-05-17 12:40:23] 2025-05-17 16:40:09,680 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 12:40:23] 2025-05-17 16:40:10,122 | INFO     | [data] copytool_out thread has finished
[2025-05-17 12:40:23] 2025-05-17 16:40:10,135 | INFO     | [payload] failed_post thread has finished
[2025-05-17 12:40:23] 2025-05-17 16:40:10,275 | INFO     | [payload] validate_post thread has finished
[2025-05-17 12:40:23] 2025-05-17 16:40:11,032 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 12:40:23] 2025-05-17 16:40:12,140 | INFO     | PID=1830023 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-17 12:40:23] 2025-05-17 16:40:12,140 | INFO     | .. there are 82 such processes running
[2025-05-17 12:40:23] 2025-05-17 16:40:12,140 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 12:40:23] 2025-05-17 16:40:12,140 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 12:40:23] 2025-05-17 16:40:12,140 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 12:40:23] 2025-05-17 16:40:15,074 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 12:40:23] 2025-05-17 16:40:16,461 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140674719803200)>', '<ExcThread(monitor, started 140673860757248)>']
[2025-05-17 12:40:23] 2025-05-17 16:40:17,175 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 12:40:23] 2025-05-17 16:40:17,175 | INFO     | [monitor] control thread has ended
[2025-05-17 12:40:23] 2025-05-17 16:40:21,487 | INFO     | all workflow threads have been joined
[2025-05-17 12:40:23] 2025-05-17 16:40:21,487 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 12:40:23] 2025-05-17 16:40:21,487 | INFO     | traces error code: 0
[2025-05-17 12:40:23] 2025-05-17 16:40:21,487 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 12:40:23] 2025-05-17 16:40:22,053 [wrapper] ==== pilot stdout END ====
[2025-05-17 12:40:23] 2025-05-17 16:40:22,070 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 12:40:23] 2025-05-17 16:40:22,135 [wrapper] pilotpid: 1830023
[2025-05-17 12:40:23] 2025-05-17 16:40:22,179 [wrapper] Pilot exit status: 0
[2025-05-17 12:40:23] 2025-05-17 16:40:22,370 [wrapper] pandaids: 6653401666
[2025-05-17 12:40:23] 2025-05-17 16:40:22,547 [wrapper] cleanup supervisor_pilot 4096569 1830024
[2025-05-17 12:40:23] 2025-05-17 16:40:22,559 [wrapper] Test setup, not cleaning
[2025-05-17 12:40:23] 2025-05-17 16:40:22,570 [wrapper] apfmon messages muted
[2025-05-17 12:40:23] 2025-05-17 16:40:22,577 [wrapper] ==== wrapper stdout END ====
[2025-05-17 12:40:23] 2025-05-17 16:40:22,580 [wrapper] ==== wrapper stderr END ====
[2025-05-17 12:40:23]  *** Error codes and diagnostics ***
[2025-05-17 12:40:23]     "exeErrorCode": 0,
[2025-05-17 12:40:23]     "exeErrorDiag": "",
[2025-05-17 12:40:23]     "pilotErrorCode": 0,
[2025-05-17 12:40:23]     "pilotErrorDiag": "",
[2025-05-17 12:40:23]  *** Listing of results directory ***
[2025-05-17 12:40:23] total 411636
[2025-05-17 12:40:23] -rw-r--r--. 1 boincer umatlas    495897 May 17 07:06 pilot3.tar.gz
[2025-05-17 12:40:23] -rw-r--r--. 1 boincer umatlas      5111 May 17 07:25 queuedata.json
[2025-05-17 12:40:23] -rwx------. 1 boincer umatlas     37140 May 17 07:26 runpilot2-wrapper.sh
[2025-05-17 12:40:23] -rw-r--r--. 1 boincer umatlas       100 May 17 10:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 12:40:23] -rwxr-xr-x. 1 boincer umatlas      7986 May 17 10:06 run_atlas
[2025-05-17 12:40:23] -rw-r--r--. 1 boincer umatlas       105 May 17 10:06 job.xml
[2025-05-17 12:40:23] -rw-r--r--. 2 boincer umatlas 221830926 May 17 10:06 EVNT.44638096._002211.pool.root.1
[2025-05-17 12:40:23] -rw-r--r--. 2 boincer umatlas     17569 May 17 10:06 start_atlas.sh
[2025-05-17 12:40:23] drwxrwx--x. 2 boincer umatlas      4096 May 17 10:06 shared
[2025-05-17 12:40:23] -rw-r--r--. 2 boincer umatlas    508878 May 17 10:06 input.tar.gz
[2025-05-17 12:40:23] -rw-r--r--. 1 boincer umatlas         0 May 17 10:06 boinc_lockfile
[2025-05-17 12:40:23] -rw-r--r--. 1 boincer umatlas      2539 May 17 10:06 pandaJob.out
[2025-05-17 12:40:23] -rw-------. 1 boincer umatlas       467 May 17 10:06 setup.sh.local
[2025-05-17 12:40:23] -rw-------. 1 boincer umatlas    994635 May 17 10:06 agis_schedconf.cvmfs.json
[2025-05-17 12:40:23] -rw-------. 1 boincer umatlas   1596741 May 17 10:06 agis_ddmendpoints.agis.ALL.json
[2025-05-17 12:40:23] drwx------. 4 boincer umatlas      4096 May 17 10:06 pilot3
[2025-05-17 12:40:23] -rw-r--r--. 1 boincer umatlas      7159 May 17 12:27 init_data.xml
[2025-05-17 12:40:23] -rw-------. 1 boincer umatlas 193632338 May 17 12:38 HITS.44638099._055019.pool.root.1
[2025-05-17 12:40:23] -rw-r--r--. 1 boincer umatlas       529 May 17 12:38 boinc_task_state.xml
[2025-05-17 12:40:23] -rw-------. 1 boincer umatlas      1033 May 17 12:39 memory_monitor_summary.json
[2025-05-17 12:40:23] -rw-------. 1 boincer umatlas    347654 May 17 12:39 log.44638099._055019.job.log.tgz.1
[2025-05-17 12:40:23] -rw-------. 1 boincer umatlas        95 May 17 12:39 pilot_heartbeat.json
[2025-05-17 12:40:23] -rw-------. 1 boincer umatlas      7696 May 17 12:40 heartbeat.json
[2025-05-17 12:40:23] -rw-r--r--. 1 boincer umatlas        27 May 17 12:40 wrapper_checkpoint.txt
[2025-05-17 12:40:23] -rw-r--r--. 1 boincer umatlas      8192 May 17 12:40 boinc_mmap_file
[2025-05-17 12:40:23] -rw-------. 1 boincer umatlas      4748 May 17 12:40 pilotlog.txt
[2025-05-17 12:40:23] -rw-------. 1 boincer umatlas    757524 May 17 12:40 log.44638099._055019.job.log.1
[2025-05-17 12:40:23] -rw-------. 1 boincer umatlas       357 May 17 12:40 output.list
[2025-05-17 12:40:23] -rw-r--r--. 1 boincer umatlas       620 May 17 12:40 runtime_log
[2025-05-17 12:40:23] -rw-------. 1 boincer umatlas   1126400 May 17 12:40 result.tar.gz
[2025-05-17 12:40:23] -rw-r--r--. 1 boincer umatlas     11413 May 17 12:40 runtime_log.err
[2025-05-17 12:40:23] -rw-------. 1 boincer umatlas       652 May 17 12:40 IUJKDm3rUa7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsPOKDmobzPkm.diag
[2025-05-17 12:40:23] -rw-r--r--. 1 boincer umatlas     20959 May 17 12:40 stderr.txt
[2025-05-17 12:40:23] HITS file was successfully produced:
[2025-05-17 12:40:23] -rw-------. 1 boincer umatlas 193632338 May 17 12:38 shared/HITS.pool.root.1
[2025-05-17 12:40:23]  *** Contents of shared directory: ***
[2025-05-17 12:40:23] total 407356
[2025-05-17 12:40:23] -rw-r--r--. 2 boincer umatlas 221830926 May 17 10:06 ATLAS.root_0
[2025-05-17 12:40:23] -rw-r--r--. 2 boincer umatlas     17569 May 17 10:06 start_atlas.sh
[2025-05-17 12:40:23] -rw-r--r--. 2 boincer umatlas    508878 May 17 10:06 input.tar.gz
[2025-05-17 12:40:23] -rw-------. 1 boincer umatlas 193632338 May 17 12:38 HITS.pool.root.1
[2025-05-17 12:40:23] -rw-------. 1 boincer umatlas   1126400 May 17 12:40 result.tar.gz
12:40:24 (1816150): run_atlas exited; CPU time 27979.260835
12:40:24 (1816150): called boinc_finish(0)

</stderr_txt>
]]>

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