Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:49:02 (2187584): wrapper (7.7.26015): starting
09:49:02 (2187584): wrapper: running run_atlas (--nthreads 8)
[2025-05-17 09:49:02] Arguments: --nthreads 8
[2025-05-17 09:49:02] Threads: 8
[2025-05-17 09:49:02] Checking for CVMFS
[2025-05-17 09:49:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 09:49:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 09:49:02] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 09:49:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 09:49:02] 2.12.6.0 863165 6959 272828 146102 3 430 29026988 40960001 21035 16776704 1 24831754 99.513 34358958 26685 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-17 09:49:02] CVMFS is ok
[2025-05-17 09:49:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-17 09:49:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-17 09:49:02] Further information can be found at the LHC@home message board.
[2025-05-17 09:49:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 09:49:02] Checking for apptainer binary...
[2025-05-17 09:49:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 09:49:02] Running /usr/bin/apptainer --version
[2025-05-17 09:49:02] apptainer version 1.4.0-1.el9
[2025-05-17 09:49:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 09:49:03] c7-11-14.aglt2.org
[2025-05-17 09:49:03] apptainer works
[2025-05-17 09:49:03] Set ATHENA_PROC_NUMBER=8
[2025-05-17 09:49:03] Set ATHENA_CORE_NUMBER=8
[2025-05-17 09:49:03] Starting ATLAS job with PandaID=6653400063
[2025-05-17 09:49:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 13:20:08]  *** The last 200 lines of the pilot log: ***
[2025-05-17 13:20:08] 2025-05-17 17:19:50,953 | INFO     | sum of square deviations: 2750247010.3864846
[2025-05-17 13:20:08] 2025-05-17 17:19:50,954 | INFO     | sum of deviations: 122250198714.20285
[2025-05-17 13:20:08] 2025-05-17 17:19:50,954 | INFO     | mean x: 1747496078.178744
[2025-05-17 13:20:08] 2025-05-17 17:19:50,954 | INFO     | mean y: 2026237.3188405796
[2025-05-17 13:20:08] 2025-05-17 17:19:50,954 | INFO     | -- intersect: -77675266748.6739
[2025-05-17 13:20:08] 2025-05-17 17:19:50,955 | INFO     | intersect: -77675266748.6739
[2025-05-17 13:20:08] 2025-05-17 17:19:50,955 | INFO     | chi2: 5.2934997579261145
[2025-05-17 13:20:08] 2025-05-17 17:19:50,955 | INFO     | sum of square deviations: 2555733717.722782
[2025-05-17 13:20:08] 2025-05-17 17:19:50,956 | INFO     | sum of deviations: 130330711298.57431
[2025-05-17 13:20:08] 2025-05-17 17:19:50,956 | INFO     | mean x: 1747495925.6831684
[2025-05-17 13:20:08] 2025-05-17 17:19:50,956 | INFO     | mean y: 2032404.2277227722
[2025-05-17 13:20:08] 2025-05-17 17:19:50,956 | INFO     | -- intersect: -89112254192.33545
[2025-05-17 13:20:08] 2025-05-17 17:19:50,957 | INFO     | intersect: -89112254192.33545
[2025-05-17 13:20:08] 2025-05-17 17:19:50,957 | INFO     | chi2: 4.600455036680917
[2025-05-17 13:20:08] 2025-05-17 17:19:50,957 | INFO     | current chi2=4.600455036680917 (change=13.092372776771754 %)
[2025-05-17 13:20:08] 2025-05-17 17:19:50,957 | INFO     | right removable region: 201
[2025-05-17 13:20:08] 2025-05-17 17:19:50,957 | INFO     | sum of square deviations: 2555711147.722782
[2025-05-17 13:20:08] 2025-05-17 17:19:50,958 | INFO     | sum of deviations: 79457589419.67319
[2025-05-17 13:20:08] 2025-05-17 17:19:50,958 | INFO     | mean x: 1747496230.6831684
[2025-05-17 13:20:08] 2025-05-17 17:19:50,958 | INFO     | mean y: 2059700.1980198019
[2025-05-17 13:20:08] 2025-05-17 17:19:50,958 | INFO     | -- intersect: -54327960393.72808
[2025-05-17 13:20:08] 2025-05-17 17:19:50,959 | INFO     | intersect: -54327960393.72808
[2025-05-17 13:20:08] 2025-05-17 17:19:50,959 | INFO     | chi2: 2.9196465061417856
[2025-05-17 13:20:08] 2025-05-17 17:19:50,959 | INFO     | current chi2=2.9196465061417856 (change=44.844684241836184 %)
[2025-05-17 13:20:08] 2025-05-17 17:19:50,959 | INFO     | sum of square deviations: 2370570810.0507765
[2025-05-17 13:20:08] 2025-05-17 17:19:50,960 | INFO     | sum of deviations: 46491732166.40105
[2025-05-17 13:20:08] 2025-05-17 17:19:50,960 | INFO     | mean x: 1747496383.1878173
[2025-05-17 13:20:08] 2025-05-17 17:19:50,960 | INFO     | mean y: 2086870.583756345
[2025-05-17 13:20:08] 2025-05-17 17:19:50,960 | INFO     | -- intersect: -34269884025.397335
[2025-05-17 13:20:08] 2025-05-17 17:19:50,960 | INFO     | intersect: -34269884025.397335
[2025-05-17 13:20:08] 2025-05-17 17:19:50,961 | INFO     | chi2: 1.667912623432225
[2025-05-17 13:20:08] 2025-05-17 17:19:50,961 | INFO     | current chi2=1.667912623432225 (change=42.87278888305162 %)
[2025-05-17 13:20:08] 2025-05-17 17:19:50,961 | INFO     | sum of square deviations: 2194605207.25
[2025-05-17 13:20:08] 2025-05-17 17:19:50,962 | INFO     | sum of deviations: 20884744737.250008
[2025-05-17 13:20:08] 2025-05-17 17:19:50,962 | INFO     | mean x: 1747496535.6875
[2025-05-17 13:20:08] 2025-05-17 17:19:50,962 | INFO     | mean y: 2108965.2708333335
[2025-05-17 13:20:08] 2025-05-17 17:19:50,962 | INFO     | -- intersect: -16627770047.362288
[2025-05-17 13:20:08] 2025-05-17 17:19:50,962 | INFO     | intersect: -16627770047.362288
[2025-05-17 13:20:08] 2025-05-17 17:19:50,962 | INFO     | chi2: 0.8265529528671679
[2025-05-17 13:20:08] 2025-05-17 17:19:50,963 | INFO     | current chi2=0.8265529528671679 (change=50.44386970545916 %)
[2025-05-17 13:20:08] 2025-05-17 17:19:50,963 | INFO     | sum of square deviations: 2027581959.8181906
[2025-05-17 13:20:08] 2025-05-17 17:19:50,964 | INFO     | sum of deviations: 13957832318.818184
[2025-05-17 13:20:08] 2025-05-17 17:19:50,964 | INFO     | mean x: 1747496688.1818182
[2025-05-17 13:20:08] 2025-05-17 17:19:50,964 | INFO     | mean y: 2115229.6524064173
[2025-05-17 13:20:08] 2025-05-17 17:19:50,964 | INFO     | -- intersect: -12027615866.159397
[2025-05-17 13:20:08] 2025-05-17 17:19:50,964 | INFO     | intersect: -12027615866.159397
[2025-05-17 13:20:08] 2025-05-17 17:19:50,964 | INFO     | chi2: 0.7543984281422487
[2025-05-17 13:20:08] 2025-05-17 17:19:50,964 | INFO     | current chi2=0.7543984281422487 (change=8.729570740099323 %)
[2025-05-17 13:20:08] 2025-05-17 17:19:50,964 | INFO     | left removable region: 40
[2025-05-17 13:20:08] 2025-05-17 17:19:50,965 | INFO     | sum of square deviations: 1293981069.7763927
[2025-05-17 13:20:08] 2025-05-17 17:19:50,965 | INFO     | sum of deviations: 13820266242.894413
[2025-05-17 13:20:08] 2025-05-17 17:19:50,965 | INFO     | mean x: 1747497115.1801243
[2025-05-17 13:20:08] 2025-05-17 17:19:50,966 | INFO     | mean y: 2134558.2795031057
[2025-05-17 13:20:08] 2025-05-17 17:19:50,966 | INFO     | -- intersect: -18661875259.61733
[2025-05-17 13:20:08] 2025-05-17 17:19:50,966 | INFO     | intersect: -18661875259.61733
[2025-05-17 13:20:08] 2025-05-17 17:19:50,966 | INFO     | chi2: 0.05417224320666089
[2025-05-17 13:20:08] 2025-05-17 17:19:50,966 | INFO     | -- intersect: -18661875259.61733
[2025-05-17 13:20:08] 2025-05-17 17:19:50,966 | INFO     | current memory leak: 10.68 B/s (using 161 data points, chi2=0.05)
[2025-05-17 13:20:08] 2025-05-17 17:19:50,967 | INFO     | ..............................
[2025-05-17 13:20:08] 2025-05-17 17:19:50,967 | INFO     | . Timing measurements:
[2025-05-17 13:20:08] 2025-05-17 17:19:50,967 | INFO     | . get job = 0 s
[2025-05-17 13:20:08] 2025-05-17 17:19:50,967 | INFO     | . initial setup = 3 s
[2025-05-17 13:20:08] 2025-05-17 17:19:50,967 | INFO     | . payload setup = 8 s
[2025-05-17 13:20:08] 2025-05-17 17:19:50,967 | INFO     | . stage-in = 0 s
[2025-05-17 13:20:08] 2025-05-17 17:19:50,967 | INFO     | . payload execution = 12587 s
[2025-05-17 13:20:08] 2025-05-17 17:19:50,967 | INFO     | . stage-out = 2 s
[2025-05-17 13:20:08] 2025-05-17 17:19:50,967 | INFO     | . log creation = 0 s
[2025-05-17 13:20:08] 2025-05-17 17:19:50,967 | INFO     | ..............................
[2025-05-17 13:20:08] 2025-05-17 17:19:51,405 | INFO     | 
[2025-05-17 13:20:08] 2025-05-17 17:19:51,405 | INFO     | job summary report
[2025-05-17 13:20:08] 2025-05-17 17:19:51,405 | INFO     | --------------------------------------------------
[2025-05-17 13:20:08] 2025-05-17 17:19:51,405 | INFO     | PanDA job id: 6653400063
[2025-05-17 13:20:08] 2025-05-17 17:19:51,405 | INFO     | task id: 44638099
[2025-05-17 13:20:08] 2025-05-17 17:19:51,405 | INFO     | errors: (none)
[2025-05-17 13:20:08] 2025-05-17 17:19:51,405 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 13:20:08] 2025-05-17 17:19:51,405 | INFO     | pilot state: finished 
[2025-05-17 13:20:08] 2025-05-17 17:19:51,405 | INFO     | transexitcode: 0
[2025-05-17 13:20:08] 2025-05-17 17:19:51,406 | INFO     | exeerrorcode: 0
[2025-05-17 13:20:08] 2025-05-17 17:19:51,406 | INFO     | exeerrordiag: 
[2025-05-17 13:20:08] 2025-05-17 17:19:51,406 | INFO     | exitcode: 0
[2025-05-17 13:20:08] 2025-05-17 17:19:51,406 | INFO     | exitmsg: OK
[2025-05-17 13:20:08] 2025-05-17 17:19:51,406 | INFO     | cpuconsumptiontime: 41085 s
[2025-05-17 13:20:08] 2025-05-17 17:19:51,406 | INFO     | nevents: 400
[2025-05-17 13:20:08] 2025-05-17 17:19:51,406 | INFO     | neventsw: 0
[2025-05-17 13:20:08] 2025-05-17 17:19:51,406 | INFO     | pid: 2199998
[2025-05-17 13:20:08] 2025-05-17 17:19:51,406 | INFO     | pgrp: 2199998
[2025-05-17 13:20:08] 2025-05-17 17:19:51,406 | INFO     | corecount: 8
[2025-05-17 13:20:08] 2025-05-17 17:19:51,406 | INFO     | event service: False
[2025-05-17 13:20:08] 2025-05-17 17:19:51,406 | INFO     | sizes: {0: 2393485, 1: 2393684, 7: 2393890, 12: 2393918, 12599: 2423612, 12602: 2432553, 12603: 2432737, 12612: 2432907}
[2025-05-17 13:20:08] 2025-05-17 17:19:51,406 | INFO     | --------------------------------------------------
[2025-05-17 13:20:08] 2025-05-17 17:19:51,406 | INFO     | 
[2025-05-17 13:20:08] 2025-05-17 17:19:51,406 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-05-17 13:20:08] 2025-05-17 17:19:51,460 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 13:20:08] 2025-05-17 17:19:51,460 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 13:20:08] 2025-05-17 17:19:51,461 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 13:20:08] 2025-05-17 17:19:51,461 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 13:20:08] 2025-05-17 17:19:51,461 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 13:20:08] 2025-05-17 17:19:51,461 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 13:20:08] 2025-05-17 17:19:51,461 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 13:20:08] 2025-05-17 17:19:51,461 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 13:20:08] 2025-05-17 17:19:51,462 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 13:20:08] 2025-05-17 17:19:51,462 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 13:20:08] 2025-05-17 17:19:51,462 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 13:20:08] 2025-05-17 17:19:51,462 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 13:20:08] 2025-05-17 17:19:51,462 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 13:20:08] 2025-05-17 17:19:51,462 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 13:20:08] 2025-05-17 17:19:51,462 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 13:20:08] 2025-05-17 17:19:51,462 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 13:20:08] 2025-05-17 17:19:51,463 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 13:20:08] 2025-05-17 17:19:51,463 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 13:20:08] 2025-05-17 17:19:51,463 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 13:20:08] 2025-05-17 17:19:51,463 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 13:20:08] 2025-05-17 17:19:51,463 | INFO     | job 6653400063 has completed (purged errors)
[2025-05-17 13:20:08] 2025-05-17 17:19:51,463 | INFO     | overall cleanup function is called
[2025-05-17 13:20:08] 2025-05-17 17:19:52,480 | INFO     | --- collectZombieJob: --- 10, [2199998]
[2025-05-17 13:20:08] 2025-05-17 17:19:52,480 | INFO     | zombie collector waiting for pid 2199998
[2025-05-17 13:20:08] 2025-05-17 17:19:52,480 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 13:20:08] 2025-05-17 17:19:52,480 | INFO     | collected zombie processes
[2025-05-17 13:20:08] 2025-05-17 17:19:52,480 | INFO     | will attempt to kill all subprocesses of pid=2199998
[2025-05-17 13:20:08] 2025-05-17 17:19:53,007 | INFO     | process IDs to be killed: [2199998] (in reverse order)
[2025-05-17 13:20:08] 2025-05-17 17:19:53,148 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 13:20:08] 2025-05-17 17:19:53,148 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 13:20:08] 2025-05-17 17:19:53,178 | INFO     | did not find any defunct processes belonging to 2199998
[2025-05-17 13:20:08] 2025-05-17 17:19:53,196 | INFO     | did not find any defunct processes belonging to 2199998
[2025-05-17 13:20:08] 2025-05-17 17:19:53,196 | INFO     | ready for new job
[2025-05-17 13:20:08] 2025-05-17 17:19:53,196 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 13:20:08] 2025-05-17 17:19:53,198 | INFO     | **************************************
[2025-05-17 13:20:08] 2025-05-17 17:19:53,198 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 13:20:08] 2025-05-17 17:19:53,198 | INFO     | **************************************
[2025-05-17 13:20:08] 2025-05-17 17:19:53,198 | INFO     | 
[2025-05-17 13:20:08] 2025-05-17 17:19:53,202 | INFO     | architecture information:
[2025-05-17 13:20:08] 2025-05-17 17:19:53,206 | INFO     | executing command: cat /etc/os-release
[2025-05-17 13:20:08] 2025-05-17 17:19:53,263 | INFO     | cat /etc/os-release:
[2025-05-17 13:20:08] NAME="CentOS Linux"
[2025-05-17 13:20:08] VERSION="7 (Core)"
[2025-05-17 13:20:08] ID="centos"
[2025-05-17 13:20:08] ID_LIKE="rhel fedora"
[2025-05-17 13:20:08] VERSION_ID="7"
[2025-05-17 13:20:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 13:20:08] ANSI_COLOR="0;31"
[2025-05-17 13:20:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 13:20:08] HOME_URL="https://www.centos.org/"
[2025-05-17 13:20:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 13:20:08] 
[2025-05-17 13:20:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 13:20:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 13:20:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 13:20:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 13:20:08] 
[2025-05-17 13:20:08] 2025-05-17 17:19:53,263 | INFO     | **************************************
[2025-05-17 13:20:08] 2025-05-17 17:19:53,769 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-05-17 13:20:08] 2025-05-17 17:19:53,815 | INFO     | sufficient remaining disk space (84910538752 B)
[2025-05-17 13:20:08] 2025-05-17 17:19:53,815 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 13:20:08] 2025-05-17 17:19:53,815 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 13:20:08] 2025-05-17 17:19:53,815 | INFO     | update_server=False
[2025-05-17 13:20:08] 2025-05-17 17:19:53,815 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 13:20:08] 2025-05-17 17:19:53,973 | INFO     | all payload control threads have been joined
[2025-05-17 13:20:08] 2025-05-17 17:19:54,085 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 13:20:08] 2025-05-17 17:19:54,212 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 13:20:08] 2025-05-17 17:19:54,212 | INFO     | aborting loop
[2025-05-17 13:20:08] 2025-05-17 17:19:54,309 | INFO     | all data control threads have been joined
[2025-05-17 13:20:08] 2025-05-17 17:19:54,655 | INFO     | all job control threads have been joined
[2025-05-17 13:20:08] 2025-05-17 17:19:54,682 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 13:20:08] 2025-05-17 17:19:54,682 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 13:20:08] 2025-05-17 17:19:54,682 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 13:20:08] 2025-05-17 17:19:54,821 | INFO     | [job] retrieve thread has finished
[2025-05-17 13:20:08] 2025-05-17 17:19:54,979 | INFO     | [payload] control thread has finished
[2025-05-17 13:20:08] 2025-05-17 17:19:55,208 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 13:20:08] 2025-05-17 17:19:55,221 | INFO     | [job] job monitor thread has finished
[2025-05-17 13:20:08] 2025-05-17 17:19:55,305 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 13:20:08] 2025-05-17 17:19:55,313 | INFO     | [payload] failed_post thread has finished
[2025-05-17 13:20:08] 2025-05-17 17:19:55,315 | INFO     | [data] control thread has finished
[2025-05-17 13:20:08] 2025-05-17 17:19:55,510 | INFO     | [data] copytool_in thread has finished
[2025-05-17 13:20:08] 2025-05-17 17:19:55,599 | INFO     | [payload] validate_post thread has finished
[2025-05-17 13:20:08] 2025-05-17 17:19:55,662 | INFO     | [job] control thread has finished
[2025-05-17 13:20:08] 2025-05-17 17:19:55,681 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 13:20:08] 2025-05-17 17:19:55,970 | INFO     | [job] validate thread has finished
[2025-05-17 13:20:08] 2025-05-17 17:19:56,023 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 13:20:08] 2025-05-17 17:19:56,077 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 13:20:08] 2025-05-17 17:19:56,092 | INFO     | [data] copytool_out thread has finished
[2025-05-17 13:20:08] 2025-05-17 17:19:57,089 | INFO     | [job] queue monitor thread has finished
[2025-05-17 13:20:08] 2025-05-17 17:19:57,308 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 13:20:08] 2025-05-17 17:20:01,326 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 13:20:08] 2025-05-17 17:20:03,060 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140631380862784)>', '<ExcThread(monitor, started 140630894298880)>']
[2025-05-17 13:20:08] 2025-05-17 17:20:03,743 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 13:20:08] 2025-05-17 17:20:03,743 | INFO     | [monitor] control thread has ended
[2025-05-17 13:20:08] 2025-05-17 17:20:08,090 | INFO     | all workflow threads have been joined
[2025-05-17 13:20:08] 2025-05-17 17:20:08,091 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 13:20:08] 2025-05-17 17:20:08,091 | INFO     | traces error code: 0
[2025-05-17 13:20:08] 2025-05-17 17:20:08,091 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 13:20:08] 2025-05-17 17:20:08,281 [wrapper] ==== pilot stdout END ====
[2025-05-17 13:20:08] 2025-05-17 17:20:08,284 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 13:20:08] 2025-05-17 17:20:08,287 [wrapper] pilotpid: 2191634
[2025-05-17 13:20:08] 2025-05-17 17:20:08,308 [wrapper] Pilot exit status: 0
[2025-05-17 13:20:08] 2025-05-17 17:20:08,337 [wrapper] pandaids: 6653400063
[2025-05-17 13:20:08] 2025-05-17 17:20:08,441 [wrapper] cleanup supervisor_pilot 3360931 2191635
[2025-05-17 13:20:08] 2025-05-17 17:20:08,445 [wrapper] Test setup, not cleaning
[2025-05-17 13:20:08] 2025-05-17 17:20:08,447 [wrapper] apfmon messages muted
[2025-05-17 13:20:08] 2025-05-17 17:20:08,449 [wrapper] ==== wrapper stdout END ====
[2025-05-17 13:20:08] 2025-05-17 17:20:08,451 [wrapper] ==== wrapper stderr END ====
[2025-05-17 13:20:08]  *** Error codes and diagnostics ***
[2025-05-17 13:20:08]     "exeErrorCode": 0,
[2025-05-17 13:20:08]     "exeErrorDiag": "",
[2025-05-17 13:20:08]     "pilotErrorCode": 0,
[2025-05-17 13:20:08]     "pilotErrorDiag": "",
[2025-05-17 13:20:08]  *** Listing of results directory ***
[2025-05-17 13:20:08] total 419816
[2025-05-17 13:20:08] -rw-r--r--. 1 boincer umatlas    495897 May 17 07:06 pilot3.tar.gz
[2025-05-17 13:20:08] -rw-r--r--. 1 boincer umatlas      5111 May 17 07:09 queuedata.json
[2025-05-17 13:20:08] -rwx------. 1 boincer umatlas     37140 May 17 07:10 runpilot2-wrapper.sh
[2025-05-17 13:20:08] -rw-r--r--. 1 boincer umatlas       100 May 17 09:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 13:20:08] -rwxr-xr-x. 1 boincer umatlas      7986 May 17 09:49 run_atlas
[2025-05-17 13:20:08] -rw-r--r--. 1 boincer umatlas       105 May 17 09:49 job.xml
[2025-05-17 13:20:08] -rw-r--r--. 2 boincer umatlas 222146274 May 17 09:49 EVNT.44638096._002202.pool.root.1
[2025-05-17 13:20:08] -rw-r--r--. 2 boincer umatlas     17569 May 17 09:49 start_atlas.sh
[2025-05-17 13:20:08] drwxrwx--x. 2 boincer umatlas      4096 May 17 09:49 shared
[2025-05-17 13:20:08] -rw-r--r--. 2 boincer umatlas    508874 May 17 09:49 input.tar.gz
[2025-05-17 13:20:08] -rw-r--r--. 1 boincer umatlas         0 May 17 09:49 boinc_lockfile
[2025-05-17 13:20:08] -rw-r--r--. 1 boincer umatlas      2536 May 17 09:49 pandaJob.out
[2025-05-17 13:20:08] -rw-------. 1 boincer umatlas       467 May 17 09:49 setup.sh.local
[2025-05-17 13:20:08] -rw-------. 1 boincer umatlas    994635 May 17 09:49 agis_schedconf.cvmfs.json
[2025-05-17 13:20:08] drwx------. 4 boincer umatlas      4096 May 17 09:49 pilot3
[2025-05-17 13:20:08] -rw-r--r--. 1 boincer umatlas      6896 May 17 13:18 init_data.xml
[2025-05-17 13:20:08] -rw-r--r--. 1 boincer umatlas       530 May 17 13:19 boinc_task_state.xml
[2025-05-17 13:20:08] -rw-------. 1 boincer umatlas 200972992 May 17 13:19 HITS.44638099._054779.pool.root.1
[2025-05-17 13:20:08] -rw-------. 1 boincer umatlas        95 May 17 13:19 pilot_heartbeat.json
[2025-05-17 13:20:08] -rw-------. 1 boincer umatlas      1034 May 17 13:19 memory_monitor_summary.json
[2025-05-17 13:20:08] -rw-------. 1 boincer umatlas   1596741 May 17 13:19 agis_ddmendpoints.agis.ALL.json
[2025-05-17 13:20:08] -rw-------. 1 boincer umatlas    366355 May 17 13:19 log.44638099._054779.job.log.tgz.1
[2025-05-17 13:20:08] -rw-------. 1 boincer umatlas      7688 May 17 13:19 heartbeat.json
[2025-05-17 13:20:08] -rw-------. 1 boincer umatlas      4353 May 17 13:20 pilotlog.txt
[2025-05-17 13:20:08] -rw-r--r--. 1 boincer umatlas        28 May 17 13:20 wrapper_checkpoint.txt
[2025-05-17 13:20:08] -rw-r--r--. 1 boincer umatlas      8192 May 17 13:20 boinc_mmap_file
[2025-05-17 13:20:08] -rw-------. 1 boincer umatlas   1096711 May 17 13:20 log.44638099._054779.job.log.1
[2025-05-17 13:20:08] -rw-------. 1 boincer umatlas       357 May 17 13:20 output.list
[2025-05-17 13:20:08] -rw-r--r--. 1 boincer umatlas       620 May 17 13:20 runtime_log
[2025-05-17 13:20:08] -rw-------. 1 boincer umatlas   1484800 May 17 13:20 result.tar.gz
[2025-05-17 13:20:08] -rw-------. 1 boincer umatlas       655 May 17 13:20 Zz3NDm2bUa7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCOOKDmcMeRgm.diag
[2025-05-17 13:20:08] -rw-r--r--. 1 boincer umatlas     11419 May 17 13:20 runtime_log.err
[2025-05-17 13:20:08] -rw-r--r--. 1 boincer umatlas     20807 May 17 13:20 stderr.txt
[2025-05-17 13:20:08] HITS file was successfully produced:
[2025-05-17 13:20:08] -rw-------. 1 boincer umatlas 200972992 May 17 13:19 shared/HITS.pool.root.1
[2025-05-17 13:20:08]  *** Contents of shared directory: ***
[2025-05-17 13:20:08] total 415184
[2025-05-17 13:20:08] -rw-r--r--. 2 boincer umatlas 222146274 May 17 09:49 ATLAS.root_0
[2025-05-17 13:20:08] -rw-r--r--. 2 boincer umatlas     17569 May 17 09:49 start_atlas.sh
[2025-05-17 13:20:08] -rw-r--r--. 2 boincer umatlas    508874 May 17 09:49 input.tar.gz
[2025-05-17 13:20:08] -rw-------. 1 boincer umatlas 200972992 May 17 13:19 HITS.pool.root.1
[2025-05-17 13:20:08] -rw-------. 1 boincer umatlas   1484800 May 17 13:20 result.tar.gz
13:20:10 (2187584): run_atlas exited; CPU time 41353.036976
13:20:10 (2187584): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN