Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:48:25 (3757991): wrapper (7.7.26015): starting
09:48:25 (3757991): wrapper: running run_atlas (--nthreads 8)
[2025-05-17 09:48:25] Arguments: --nthreads 8
[2025-05-17 09:48:25] Threads: 8
[2025-05-17 09:48:25] Checking for CVMFS
[2025-05-17 09:48:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 09:48:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 09:48:25] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 09:48:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 09:48:26] 2.12.6.0 872076 6959 292764 146102 3 401 24853845 40960001 20086 16776704 1 23724051 99.574 28867787 26820 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-17 09:48:26] CVMFS is ok
[2025-05-17 09:48:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-17 09:48:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-17 09:48:26] Further information can be found at the LHC@home message board.
[2025-05-17 09:48:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 09:48:26] Checking for apptainer binary...
[2025-05-17 09:48:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 09:48:26] Running /usr/bin/apptainer --version
[2025-05-17 09:48:26] apptainer version 1.4.0-1.el9
[2025-05-17 09:48:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 09:48:26] c7-11-12.aglt2.org
[2025-05-17 09:48:26] apptainer works
[2025-05-17 09:48:26] Set ATHENA_PROC_NUMBER=8
[2025-05-17 09:48:26] Set ATHENA_CORE_NUMBER=8
[2025-05-17 09:48:26] Starting ATLAS job with PandaID=6653399485
[2025-05-17 09:48:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 13:00:42]  *** The last 200 lines of the pilot log: ***
[2025-05-17 13:00:42] 2025-05-17 17:00:27,888 | INFO     | mean y: 2033369.9680851065
[2025-05-17 13:00:42] 2025-05-17 17:00:27,888 | INFO     | -- intersect: -72092334945.22061
[2025-05-17 13:00:42] 2025-05-17 17:00:27,888 | INFO     | intersect: -72092334945.22061
[2025-05-17 13:00:42] 2025-05-17 17:00:27,888 | INFO     | chi2: 4.249596850151119
[2025-05-17 13:00:42] 2025-05-17 17:00:27,888 | INFO     | sum of square deviations: 1900392939.8142078
[2025-05-17 13:00:42] 2025-05-17 17:00:27,889 | INFO     | sum of deviations: 83321134765.55203
[2025-05-17 13:00:42] 2025-05-17 17:00:27,889 | INFO     | mean x: 1747495321.2240436
[2025-05-17 13:00:42] 2025-05-17 17:00:27,889 | INFO     | mean y: 2031734.0109289617
[2025-05-17 13:00:42] 2025-05-17 17:00:27,890 | INFO     | -- intersect: -76615435165.28996
[2025-05-17 13:00:42] 2025-05-17 17:00:27,890 | INFO     | intersect: -76615435165.28996
[2025-05-17 13:00:42] 2025-05-17 17:00:27,890 | INFO     | chi2: 4.2289023789735625
[2025-05-17 13:00:42] 2025-05-17 17:00:27,890 | INFO     | current chi2=4.2289023789735625 (change=0.4869749274409497 %)
[2025-05-17 13:00:42] 2025-05-17 17:00:27,890 | INFO     | right removable region: 182
[2025-05-17 13:00:42] 2025-05-17 17:00:27,890 | INFO     | sum of square deviations: 1900367929.8142078
[2025-05-17 13:00:42] 2025-05-17 17:00:27,891 | INFO     | sum of deviations: 45909877582.34977
[2025-05-17 13:00:42] 2025-05-17 17:00:27,891 | INFO     | mean x: 1747495626.2240436
[2025-05-17 13:00:42] 2025-05-17 17:00:27,891 | INFO     | mean y: 2070512.2841530056
[2025-05-17 13:00:42] 2025-05-17 17:00:27,891 | INFO     | -- intersect: -42214654479.21842
[2025-05-17 13:00:42] 2025-05-17 17:00:27,891 | INFO     | intersect: -42214654479.21842
[2025-05-17 13:00:42] 2025-05-17 17:00:27,892 | INFO     | chi2: 1.7474811350513793
[2025-05-17 13:00:42] 2025-05-17 17:00:27,892 | INFO     | current chi2=1.7474811350513793 (change=58.87889612424676 %)
[2025-05-17 13:00:42] 2025-05-17 17:00:27,892 | INFO     | sum of square deviations: 1748808397.0561793
[2025-05-17 13:00:42] 2025-05-17 17:00:27,893 | INFO     | sum of deviations: 19167898415.69662
[2025-05-17 13:00:42] 2025-05-17 17:00:27,893 | INFO     | mean x: 1747495778.7303371
[2025-05-17 13:00:42] 2025-05-17 17:00:27,893 | INFO     | mean y: 2097427.5561797754
[2025-05-17 13:00:42] 2025-05-17 17:00:27,893 | INFO     | -- intersect: -19151413971.94663
[2025-05-17 13:00:42] 2025-05-17 17:00:27,893 | INFO     | intersect: -19151413971.94663
[2025-05-17 13:00:42] 2025-05-17 17:00:27,893 | INFO     | chi2: 0.6885914920802607
[2025-05-17 13:00:42] 2025-05-17 17:00:27,894 | INFO     | current chi2=0.6885914920802607 (change=60.595197380484755 %)
[2025-05-17 13:00:42] 2025-05-17 17:00:27,894 | INFO     | sum of square deviations: 1605528089.2832353
[2025-05-17 13:00:42] 2025-05-17 17:00:27,895 | INFO     | sum of deviations: 2735388003.5433526
[2025-05-17 13:00:42] 2025-05-17 17:00:27,895 | INFO     | mean x: 1747495931.2369943
[2025-05-17 13:00:42] 2025-05-17 17:00:27,895 | INFO     | mean y: 2114732.352601156
[2025-05-17 13:00:42] 2025-05-17 17:00:27,895 | INFO     | -- intersect: -2975148286.870246
[2025-05-17 13:00:42] 2025-05-17 17:00:27,895 | INFO     | intersect: -2975148286.870246
[2025-05-17 13:00:42] 2025-05-17 17:00:27,895 | INFO     | chi2: 0.06406638573232508
[2025-05-17 13:00:42] 2025-05-17 17:00:27,895 | INFO     | current chi2=0.06406638573232508 (change=90.69602420750536 %)
[2025-05-17 13:00:42] 2025-05-17 17:00:27,895 | INFO     | sum of square deviations: 1470294443.994046
[2025-05-17 13:00:42] 2025-05-17 17:00:27,896 | INFO     | sum of deviations: 1978433154.2142844
[2025-05-17 13:00:42] 2025-05-17 17:00:27,896 | INFO     | mean x: 1747496083.7440476
[2025-05-17 13:00:42] 2025-05-17 17:00:27,896 | INFO     | mean y: 2115583.214285714
[2025-05-17 13:00:42] 2025-05-17 17:00:27,896 | INFO     | -- intersect: -2349321030.765632
[2025-05-17 13:00:42] 2025-05-17 17:00:27,896 | INFO     | intersect: -2349321030.765632
[2025-05-17 13:00:42] 2025-05-17 17:00:27,897 | INFO     | chi2: 0.06320987671579824
[2025-05-17 13:00:42] 2025-05-17 17:00:27,897 | INFO     | current chi2=0.06320987671579824 (change=1.3369085936974965 %)
[2025-05-17 13:00:42] 2025-05-17 17:00:27,897 | INFO     | left removable region: 40
[2025-05-17 13:00:42] 2025-05-17 17:00:27,897 | INFO     | sum of square deviations: 887834630.2323947
[2025-05-17 13:00:42] 2025-05-17 17:00:27,898 | INFO     | sum of deviations: -282274440.6830987
[2025-05-17 13:00:42] 2025-05-17 17:00:27,898 | INFO     | mean x: 1747496510.7816901
[2025-05-17 13:00:42] 2025-05-17 17:00:27,898 | INFO     | mean y: 2119956.4295774647
[2025-05-17 13:00:42] 2025-05-17 17:00:27,898 | INFO     | -- intersect: 557711711.2223045
[2025-05-17 13:00:42] 2025-05-17 17:00:27,898 | INFO     | intersect: 557711711.2223045
[2025-05-17 13:00:42] 2025-05-17 17:00:27,898 | INFO     | chi2: 0.03913995164649098
[2025-05-17 13:00:42] 2025-05-17 17:00:27,898 | INFO     | -- intersect: 557711711.2223045
[2025-05-17 13:00:42] 2025-05-17 17:00:27,898 | INFO     | current memory leak: -0.32 B/s (using 142 data points, chi2=0.04)
[2025-05-17 13:00:42] 2025-05-17 17:00:27,899 | INFO     | ..............................
[2025-05-17 13:00:42] 2025-05-17 17:00:27,899 | INFO     | . Timing measurements:
[2025-05-17 13:00:42] 2025-05-17 17:00:27,899 | INFO     | . get job = 0 s
[2025-05-17 13:00:42] 2025-05-17 17:00:27,899 | INFO     | . initial setup = 3 s
[2025-05-17 13:00:42] 2025-05-17 17:00:27,899 | INFO     | . payload setup = 12 s
[2025-05-17 13:00:42] 2025-05-17 17:00:27,899 | INFO     | . stage-in = 0 s
[2025-05-17 13:00:42] 2025-05-17 17:00:27,899 | INFO     | . payload execution = 11450 s
[2025-05-17 13:00:42] 2025-05-17 17:00:27,899 | INFO     | . stage-out = 2 s
[2025-05-17 13:00:42] 2025-05-17 17:00:27,899 | INFO     | . log creation = 0 s
[2025-05-17 13:00:42] 2025-05-17 17:00:27,899 | INFO     | ..............................
[2025-05-17 13:00:42] 2025-05-17 17:00:27,974 | INFO     | 
[2025-05-17 13:00:42] 2025-05-17 17:00:27,974 | INFO     | job summary report
[2025-05-17 13:00:42] 2025-05-17 17:00:27,974 | INFO     | --------------------------------------------------
[2025-05-17 13:00:42] 2025-05-17 17:00:27,974 | INFO     | PanDA job id: 6653399485
[2025-05-17 13:00:42] 2025-05-17 17:00:27,974 | INFO     | task id: 44638099
[2025-05-17 13:00:42] 2025-05-17 17:00:27,974 | INFO     | errors: (none)
[2025-05-17 13:00:42] 2025-05-17 17:00:27,975 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 13:00:42] 2025-05-17 17:00:27,975 | INFO     | pilot state: finished 
[2025-05-17 13:00:42] 2025-05-17 17:00:27,975 | INFO     | transexitcode: 0
[2025-05-17 13:00:42] 2025-05-17 17:00:27,975 | INFO     | exeerrorcode: 0
[2025-05-17 13:00:42] 2025-05-17 17:00:27,975 | INFO     | exeerrordiag: 
[2025-05-17 13:00:42] 2025-05-17 17:00:27,975 | INFO     | exitcode: 0
[2025-05-17 13:00:42] 2025-05-17 17:00:27,975 | INFO     | exitmsg: OK
[2025-05-17 13:00:42] 2025-05-17 17:00:27,975 | INFO     | cpuconsumptiontime: 42274 s
[2025-05-17 13:00:42] 2025-05-17 17:00:27,975 | INFO     | nevents: 400
[2025-05-17 13:00:42] 2025-05-17 17:00:27,975 | INFO     | neventsw: 0
[2025-05-17 13:00:42] 2025-05-17 17:00:27,975 | INFO     | pid: 3772002
[2025-05-17 13:00:42] 2025-05-17 17:00:27,975 | INFO     | pgrp: 3772002
[2025-05-17 13:00:42] 2025-05-17 17:00:27,975 | INFO     | corecount: 8
[2025-05-17 13:00:42] 2025-05-17 17:00:27,975 | INFO     | event service: False
[2025-05-17 13:00:42] 2025-05-17 17:00:27,975 | INFO     | sizes: {0: 2393491, 1: 2393690, 10: 2393896, 11: 2393924, 11466: 2423126, 11467: 2423125, 11469: 2432250, 11472: 2432306, 11483: 2432476}
[2025-05-17 13:00:42] 2025-05-17 17:00:27,976 | INFO     | --------------------------------------------------
[2025-05-17 13:00:42] 2025-05-17 17:00:27,976 | INFO     | 
[2025-05-17 13:00:42] 2025-05-17 17:00:27,976 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-17 13:00:42] 2025-05-17 17:00:28,127 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 13:00:42] 2025-05-17 17:00:28,127 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 13:00:42] 2025-05-17 17:00:28,127 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 13:00:42] 2025-05-17 17:00:28,128 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 13:00:42] 2025-05-17 17:00:28,128 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 13:00:42] 2025-05-17 17:00:28,128 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 13:00:42] 2025-05-17 17:00:28,128 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 13:00:42] 2025-05-17 17:00:28,128 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 13:00:42] 2025-05-17 17:00:28,128 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 13:00:42] 2025-05-17 17:00:28,128 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 13:00:42] 2025-05-17 17:00:28,128 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 13:00:42] 2025-05-17 17:00:28,128 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 13:00:42] 2025-05-17 17:00:28,128 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 13:00:42] 2025-05-17 17:00:28,128 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 13:00:42] 2025-05-17 17:00:28,128 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 13:00:42] 2025-05-17 17:00:28,128 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 13:00:42] 2025-05-17 17:00:28,129 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 13:00:42] 2025-05-17 17:00:28,129 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 13:00:42] 2025-05-17 17:00:28,129 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 13:00:42] 2025-05-17 17:00:28,129 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 13:00:42] 2025-05-17 17:00:28,129 | INFO     | job 6653399485 has completed (purged errors)
[2025-05-17 13:00:42] 2025-05-17 17:00:28,129 | INFO     | overall cleanup function is called
[2025-05-17 13:00:42] 2025-05-17 17:00:29,153 | INFO     | --- collectZombieJob: --- 10, [3772002]
[2025-05-17 13:00:42] 2025-05-17 17:00:29,153 | INFO     | zombie collector waiting for pid 3772002
[2025-05-17 13:00:42] 2025-05-17 17:00:29,153 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 13:00:42] 2025-05-17 17:00:29,153 | INFO     | collected zombie processes
[2025-05-17 13:00:42] 2025-05-17 17:00:29,153 | INFO     | will attempt to kill all subprocesses of pid=3772002
[2025-05-17 13:00:42] 2025-05-17 17:00:29,591 | INFO     | process IDs to be killed: [3772002] (in reverse order)
[2025-05-17 13:00:42] 2025-05-17 17:00:29,728 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 13:00:42] 2025-05-17 17:00:29,728 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 13:00:42] 2025-05-17 17:00:29,751 | INFO     | did not find any defunct processes belonging to 3772002
[2025-05-17 13:00:42] 2025-05-17 17:00:29,766 | INFO     | did not find any defunct processes belonging to 3772002
[2025-05-17 13:00:42] 2025-05-17 17:00:29,766 | INFO     | ready for new job
[2025-05-17 13:00:42] 2025-05-17 17:00:29,767 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 13:00:42] 2025-05-17 17:00:29,769 | INFO     | **************************************
[2025-05-17 13:00:42] 2025-05-17 17:00:29,769 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 13:00:42] 2025-05-17 17:00:29,769 | INFO     | **************************************
[2025-05-17 13:00:42] 2025-05-17 17:00:29,769 | INFO     | 
[2025-05-17 13:00:42] 2025-05-17 17:00:29,785 | INFO     | architecture information:
[2025-05-17 13:00:42] 2025-05-17 17:00:29,786 | INFO     | executing command: cat /etc/os-release
[2025-05-17 13:00:42] 2025-05-17 17:00:29,804 | INFO     | cat /etc/os-release:
[2025-05-17 13:00:42] NAME="CentOS Linux"
[2025-05-17 13:00:42] VERSION="7 (Core)"
[2025-05-17 13:00:42] ID="centos"
[2025-05-17 13:00:42] ID_LIKE="rhel fedora"
[2025-05-17 13:00:42] VERSION_ID="7"
[2025-05-17 13:00:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 13:00:42] ANSI_COLOR="0;31"
[2025-05-17 13:00:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 13:00:42] HOME_URL="https://www.centos.org/"
[2025-05-17 13:00:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 13:00:42] 
[2025-05-17 13:00:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 13:00:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 13:00:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 13:00:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 13:00:42] 
[2025-05-17 13:00:42] 2025-05-17 17:00:29,804 | INFO     | **************************************
[2025-05-17 13:00:42] 2025-05-17 17:00:30,307 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-17 13:00:42] 2025-05-17 17:00:30,328 | INFO     | sufficient remaining disk space (84462796800 B)
[2025-05-17 13:00:42] 2025-05-17 17:00:30,328 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 13:00:42] 2025-05-17 17:00:30,328 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 13:00:42] 2025-05-17 17:00:30,329 | INFO     | update_server=False
[2025-05-17 13:00:42] 2025-05-17 17:00:30,329 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 13:00:42] 2025-05-17 17:00:30,329 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 13:00:42] 2025-05-17 17:00:30,331 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-17 13:00:42] 2025-05-17 17:00:30,331 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 13:00:42] 2025-05-17 17:00:30,331 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 13:00:42] 2025-05-17 17:00:30,331 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 13:00:42] 2025-05-17 17:00:30,670 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-17 13:00:42] 2025-05-17 17:00:30,670 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-17 13:00:42] 2025-05-17 17:00:30,670 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 13:00:42] 2025-05-17 17:00:30,670 | INFO     | will abort loop
[2025-05-17 13:00:42] 2025-05-17 17:00:30,736 | INFO     | all payload control threads have been joined
[2025-05-17 13:00:42] 2025-05-17 17:00:30,937 | INFO     | all job control threads have been joined
[2025-05-17 13:00:42] 2025-05-17 17:00:31,334 | INFO     | [job] retrieve thread has finished
[2025-05-17 13:00:42] 2025-05-17 17:00:31,402 | INFO     | all data control threads have been joined
[2025-05-17 13:00:42] 2025-05-17 17:00:31,676 | INFO     | [job] job monitor thread has finished
[2025-05-17 13:00:42] 2025-05-17 17:00:31,696 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 13:00:42] 2025-05-17 17:00:31,749 | INFO     | [payload] control thread has finished
[2025-05-17 13:00:42] 2025-05-17 17:00:31,935 | INFO     | [payload] validate_post thread has finished
[2025-05-17 13:00:42] 2025-05-17 17:00:31,945 | INFO     | [job] control thread has finished
[2025-05-17 13:00:42] 2025-05-17 17:00:32,146 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 13:00:42] 2025-05-17 17:00:32,181 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 13:00:42] 2025-05-17 17:00:32,353 | INFO     | [data] copytool_out thread has finished
[2025-05-17 13:00:42] 2025-05-17 17:00:32,407 | INFO     | [data] control thread has finished
[2025-05-17 13:00:42] 2025-05-17 17:00:32,428 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 13:00:42] 2025-05-17 17:00:32,434 | INFO     | [job] validate thread has finished
[2025-05-17 13:00:42] 2025-05-17 17:00:32,663 | INFO     | [data] copytool_in thread has finished
[2025-05-17 13:00:42] 2025-05-17 17:00:32,777 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 13:00:42] 2025-05-17 17:00:32,842 | INFO     | [payload] failed_post thread has finished
[2025-05-17 13:00:42] 2025-05-17 17:00:32,997 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 13:00:42] 2025-05-17 17:00:34,007 | INFO     | [job] queue monitor thread has finished
[2025-05-17 13:00:42] 2025-05-17 17:00:36,446 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 13:00:42] 2025-05-17 17:00:36,579 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140322665936704)>', '<ExcThread(monitor, started 140322310956800)>']
[2025-05-17 13:00:42] 2025-05-17 17:00:37,377 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 13:00:42] 2025-05-17 17:00:37,381 | INFO     | [monitor] control thread has ended
[2025-05-17 13:00:42] 2025-05-17 17:00:41,605 | INFO     | all workflow threads have been joined
[2025-05-17 13:00:42] 2025-05-17 17:00:41,605 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 13:00:42] 2025-05-17 17:00:41,605 | INFO     | traces error code: 0
[2025-05-17 13:00:42] 2025-05-17 17:00:41,606 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 13:00:42] 2025-05-17 17:00:41,751 [wrapper] ==== pilot stdout END ====
[2025-05-17 13:00:42] 2025-05-17 17:00:41,753 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 13:00:42] 2025-05-17 17:00:41,755 [wrapper] pilotpid: 3762855
[2025-05-17 13:00:42] 2025-05-17 17:00:41,757 [wrapper] Pilot exit status: 0
[2025-05-17 13:00:42] 2025-05-17 17:00:41,768 [wrapper] pandaids: 6653399485
[2025-05-17 13:00:42] 2025-05-17 17:00:41,855 [wrapper] cleanup supervisor_pilot  366044 3762856
[2025-05-17 13:00:42] 2025-05-17 17:00:41,867 [wrapper] Test setup, not cleaning
[2025-05-17 13:00:42] 2025-05-17 17:00:41,874 [wrapper] apfmon messages muted
[2025-05-17 13:00:42] 2025-05-17 17:00:41,878 [wrapper] ==== wrapper stdout END ====
[2025-05-17 13:00:42] 2025-05-17 17:00:41,880 [wrapper] ==== wrapper stderr END ====
[2025-05-17 13:00:42]  *** Error codes and diagnostics ***
[2025-05-17 13:00:42]     "exeErrorCode": 0,
[2025-05-17 13:00:42]     "exeErrorDiag": "",
[2025-05-17 13:00:42]     "pilotErrorCode": 0,
[2025-05-17 13:00:42]     "pilotErrorDiag": "",
[2025-05-17 13:00:42]  *** Listing of results directory ***
[2025-05-17 13:00:42] total 417984
[2025-05-17 13:00:42] -rw-r--r--. 1 boincer umatlas    495897 May 17 06:38 pilot3.tar.gz
[2025-05-17 13:00:42] -rw-r--r--. 1 boincer umatlas      5111 May 17 06:41 queuedata.json
[2025-05-17 13:00:42] -rwx------. 1 boincer umatlas     37140 May 17 06:43 runpilot2-wrapper.sh
[2025-05-17 13:00:42] -rw-r--r--. 1 boincer umatlas       100 May 17 09:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 13:00:42] -rwxr-xr-x. 1 boincer umatlas      7986 May 17 09:48 run_atlas
[2025-05-17 13:00:42] -rw-r--r--. 1 boincer umatlas       105 May 17 09:48 job.xml
[2025-05-17 13:00:42] -rw-r--r--. 2 boincer umatlas 222070071 May 17 09:48 EVNT.44638096._002186.pool.root.1
[2025-05-17 13:00:42] drwxrwx--x. 2 boincer umatlas      4096 May 17 09:48 shared
[2025-05-17 13:00:42] -rw-r--r--. 2 boincer umatlas    508879 May 17 09:48 input.tar.gz
[2025-05-17 13:00:42] -rw-r--r--. 2 boincer umatlas     17569 May 17 09:48 start_atlas.sh
[2025-05-17 13:00:42] -rw-r--r--. 1 boincer umatlas         0 May 17 09:48 boinc_lockfile
[2025-05-17 13:00:42] -rw-r--r--. 1 boincer umatlas      2539 May 17 09:48 pandaJob.out
[2025-05-17 13:00:42] -rw-------. 1 boincer umatlas       467 May 17 09:48 setup.sh.local
[2025-05-17 13:00:42] -rw-------. 1 boincer umatlas    994635 May 17 09:48 agis_schedconf.cvmfs.json
[2025-05-17 13:00:42] drwx------. 4 boincer umatlas      4096 May 17 09:48 pilot3
[2025-05-17 13:00:42] -rw-r--r--. 1 boincer umatlas      6897 May 17 12:54 init_data.xml
[2025-05-17 13:00:42] -rw-------. 1 boincer umatlas 199377048 May 17 12:59 HITS.44638099._054462.pool.root.1
[2025-05-17 13:00:42] -rw-r--r--. 1 boincer umatlas       530 May 17 12:59 boinc_task_state.xml
[2025-05-17 13:00:42] -rw-------. 1 boincer umatlas      1030 May 17 13:00 memory_monitor_summary.json
[2025-05-17 13:00:42] -rw-------. 1 boincer umatlas   1596741 May 17 13:00 agis_ddmendpoints.agis.ALL.json
[2025-05-17 13:00:42] -rw-------. 1 boincer umatlas    363858 May 17 13:00 log.44638099._054462.job.log.tgz.1
[2025-05-17 13:00:42] -rw-------. 1 boincer umatlas        95 May 17 13:00 pilot_heartbeat.json
[2025-05-17 13:00:42] -rw-------. 1 boincer umatlas      7689 May 17 13:00 heartbeat.json
[2025-05-17 13:00:42] -rw-r--r--. 1 boincer umatlas      8192 May 17 13:00 boinc_mmap_file
[2025-05-17 13:00:42] -rw-r--r--. 1 boincer umatlas        28 May 17 13:00 wrapper_checkpoint.txt
[2025-05-17 13:00:42] -rw-------. 1 boincer umatlas      4662 May 17 13:00 pilotlog.txt
[2025-05-17 13:00:42] -rw-------. 1 boincer umatlas    994658 May 17 13:00 log.44638099._054462.job.log.1
[2025-05-17 13:00:42] -rw-------. 1 boincer umatlas       357 May 17 13:00 output.list
[2025-05-17 13:00:42] -rw-r--r--. 1 boincer umatlas       620 May 17 13:00 runtime_log
[2025-05-17 13:00:42] -rw-------. 1 boincer umatlas   1382400 May 17 13:00 result.tar.gz
[2025-05-17 13:00:42] -rw-------. 1 boincer umatlas       655 May 17 13:00 ynEODmFCUa7n9Rq4apOajLDm4fhM0noT9bVof3QYDmxQKKDmAaMzRo.diag
[2025-05-17 13:00:42] -rw-r--r--. 1 boincer umatlas     11419 May 17 13:00 runtime_log.err
[2025-05-17 13:00:42] -rw-r--r--. 1 boincer umatlas     20921 May 17 13:00 stderr.txt
[2025-05-17 13:00:42] HITS file was successfully produced:
[2025-05-17 13:00:42] -rw-------. 1 boincer umatlas 199377048 May 17 12:59 shared/HITS.pool.root.1
[2025-05-17 13:00:42]  *** Contents of shared directory: ***
[2025-05-17 13:00:42] total 413456
[2025-05-17 13:00:42] -rw-r--r--. 2 boincer umatlas 222070071 May 17 09:48 ATLAS.root_0
[2025-05-17 13:00:42] -rw-r--r--. 2 boincer umatlas    508879 May 17 09:48 input.tar.gz
[2025-05-17 13:00:42] -rw-r--r--. 2 boincer umatlas     17569 May 17 09:48 start_atlas.sh
[2025-05-17 13:00:42] -rw-------. 1 boincer umatlas 199377048 May 17 12:59 HITS.pool.root.1
[2025-05-17 13:00:42] -rw-------. 1 boincer umatlas   1382400 May 17 13:00 result.tar.gz
13:00:43 (3757991): run_atlas exited; CPU time 42473.215599
13:00:43 (3757991): called boinc_finish(0)

</stderr_txt>
]]>

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