Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:48:38 (2437444): wrapper (7.7.26015): starting
08:48:38 (2437444): wrapper: running run_atlas (--nthreads 8)
[2025-05-17 08:48:38] Arguments: --nthreads 8
[2025-05-17 08:48:38] Threads: 8
[2025-05-17 08:48:38] Checking for CVMFS
[2025-05-17 08:48:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 08:48:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 08:48:39] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 08:48:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 08:48:39] 2.12.6.0 14765 6888 313548 146101 0 790 21513857 32935937 29784 16776704 1 76521329 99.702 57275233 19239 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-17 08:48:39] CVMFS is ok
[2025-05-17 08:48:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-17 08:48:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-17 08:48:39] Further information can be found at the LHC@home message board.
[2025-05-17 08:48:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 08:48:39] Checking for apptainer binary...
[2025-05-17 08:48:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 08:48:39] Running /usr/bin/apptainer --version
[2025-05-17 08:48:39] apptainer version 1.4.0-1.el9
[2025-05-17 08:48:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 08:48:39] c7-7-35.aglt2.org
[2025-05-17 08:48:39] apptainer works
[2025-05-17 08:48:39] Set ATHENA_PROC_NUMBER=8
[2025-05-17 08:48:39] Set ATHENA_CORE_NUMBER=8
[2025-05-17 08:48:40] Starting ATLAS job with PandaID=6653398718
[2025-05-17 08:48:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
11:20:05 (2437444): BOINC client no longer exists - exiting
11:20:05 (2437444): timer handler: client dead, exiting
11:20:47 (3708689): wrapper (7.7.26015): starting
11:20:47 (3708689): wrapper: running run_atlas (--nthreads 8)
[2025-05-17 11:20:47] Arguments: --nthreads 8
[2025-05-17 11:20:47] Threads: 8
[2025-05-17 11:20:47] This job has been restarted, cleaning up previous attempt
[2025-05-17 11:20:47] Checking for CVMFS
[2025-05-17 11:20:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 11:20:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 11:20:47] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 11:20:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 11:20:47] 2.12.6.0 14765 7041 287400 146106 0 195 22022829 32935937 23525 16776704 1 77629111 99.706 57446880 19236 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-17 11:20:47] CVMFS is ok
[2025-05-17 11:20:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-17 11:20:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-17 11:20:47] Further information can be found at the LHC@home message board.
[2025-05-17 11:20:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 11:20:47] Checking for apptainer binary...
[2025-05-17 11:20:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 11:20:47] Running /usr/bin/apptainer --version
[2025-05-17 11:20:47] apptainer version 1.4.0-1.el9
[2025-05-17 11:20:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 11:20:47] c7-7-35.aglt2.org
[2025-05-17 11:20:47] apptainer works
[2025-05-17 11:20:47] Set ATHENA_PROC_NUMBER=8
[2025-05-17 11:20:47] Set ATHENA_CORE_NUMBER=8
[2025-05-17 11:20:47] Starting ATLAS job with PandaID=6653398718
[2025-05-17 11:20:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 16:14:12]  *** The last 200 lines of the pilot log: ***
[2025-05-17 16:14:12] 2025-05-17 20:13:58,696 | INFO     | sum of square deviations: 7406892940.000012
[2025-05-17 16:14:12] 2025-05-17 20:13:58,698 | INFO     | sum of deviations: 171156630060.91663
[2025-05-17 16:14:12] 2025-05-17 20:13:58,698 | INFO     | mean x: 1747504046.5833333
[2025-05-17 16:14:12] 2025-05-17 20:13:58,699 | INFO     | mean y: 2039300.982638889
[2025-05-17 16:14:12] 2025-05-17 20:13:58,699 | INFO     | -- intersect: -40378847266.95767
[2025-05-17 16:14:12] 2025-05-17 20:13:58,699 | INFO     | intersect: -40378847266.95767
[2025-05-17 16:14:12] 2025-05-17 20:13:58,699 | INFO     | chi2: 5.131676265632381
[2025-05-17 16:14:12] 2025-05-17 20:13:58,699 | INFO     | sum of square deviations: 7027767569.964679
[2025-05-17 16:14:12] 2025-05-17 20:13:58,701 | INFO     | sum of deviations: 167250364321.21207
[2025-05-17 16:14:12] 2025-05-17 20:13:58,701 | INFO     | mean x: 1747503894.0848057
[2025-05-17 16:14:12] 2025-05-17 20:13:58,701 | INFO     | mean y: 2037719.4911660778
[2025-05-17 16:14:12] 2025-05-17 20:13:58,701 | INFO     | -- intersect: -41585943104.964226
[2025-05-17 16:14:12] 2025-05-17 20:13:58,702 | INFO     | intersect: -41585943104.964226
[2025-05-17 16:14:12] 2025-05-17 20:13:58,702 | INFO     | chi2: 5.127289218639114
[2025-05-17 16:14:12] 2025-05-17 20:13:58,702 | INFO     | current chi2=5.127289218639114 (change=0.08548955090264079 %)
[2025-05-17 16:14:12] 2025-05-17 20:13:58,702 | INFO     | right removable region: 282
[2025-05-17 16:14:12] 2025-05-17 20:13:58,702 | INFO     | sum of square deviations: 7027752929.964679
[2025-05-17 16:14:12] 2025-05-17 20:13:58,704 | INFO     | sum of deviations: 108203564087.83754
[2025-05-17 16:14:12] 2025-05-17 20:13:58,704 | INFO     | mean x: 1747504199.0848057
[2025-05-17 16:14:12] 2025-05-17 20:13:58,704 | INFO     | mean y: 2064581.5901060072
[2025-05-17 16:14:12] 2025-05-17 20:13:58,704 | INFO     | -- intersect: -26903574316.61577
[2025-05-17 16:14:12] 2025-05-17 20:13:58,704 | INFO     | intersect: -26903574316.61577
[2025-05-17 16:14:12] 2025-05-17 20:13:58,705 | INFO     | chi2: 2.4219292912610797
[2025-05-17 16:14:12] 2025-05-17 20:13:58,705 | INFO     | current chi2=2.4219292912610797 (change=52.80432424233169 %)
[2025-05-17 16:14:12] 2025-05-17 20:13:58,705 | INFO     | sum of square deviations: 6661775957.428064
[2025-05-17 16:14:12] 2025-05-17 20:13:58,709 | INFO     | sum of deviations: 60784707296.68343
[2025-05-17 16:14:12] 2025-05-17 20:13:58,709 | INFO     | mean x: 1747504351.586331
[2025-05-17 16:14:12] 2025-05-17 20:13:58,709 | INFO     | mean y: 2084343.179856115
[2025-05-17 16:14:12] 2025-05-17 20:13:58,709 | INFO     | -- intersect: -15942844034.727503
[2025-05-17 16:14:12] 2025-05-17 20:13:58,710 | INFO     | intersect: -15942844034.727503
[2025-05-17 16:14:12] 2025-05-17 20:13:58,710 | INFO     | chi2: 1.0201555354569878
[2025-05-17 16:14:12] 2025-05-17 20:13:58,710 | INFO     | current chi2=1.0201555354569878 (change=57.878393100163514 %)
[2025-05-17 16:14:12] 2025-05-17 20:13:58,710 | INFO     | sum of square deviations: 6308729459.8901205
[2025-05-17 16:14:12] 2025-05-17 20:13:58,712 | INFO     | sum of deviations: 25731707320.527477
[2025-05-17 16:14:12] 2025-05-17 20:13:58,712 | INFO     | mean x: 1747504504.087912
[2025-05-17 16:14:12] 2025-05-17 20:13:58,712 | INFO     | mean y: 2099427.644688645
[2025-05-17 16:14:12] 2025-05-17 20:13:58,712 | INFO     | -- intersect: -7125528207.425407
[2025-05-17 16:14:12] 2025-05-17 20:13:58,712 | INFO     | intersect: -7125528207.425407
[2025-05-17 16:14:12] 2025-05-17 20:13:58,713 | INFO     | chi2: 0.13303836667714236
[2025-05-17 16:14:12] 2025-05-17 20:13:58,713 | INFO     | current chi2=0.13303836667714236 (change=86.95901143960889 %)
[2025-05-17 16:14:12] 2025-05-17 20:13:58,713 | INFO     | sum of square deviations: 5968380874.850761
[2025-05-17 16:14:12] 2025-05-17 20:13:58,715 | INFO     | sum of deviations: 24302816224.992542
[2025-05-17 16:14:12] 2025-05-17 20:13:58,715 | INFO     | mean x: 1747504656.5895522
[2025-05-17 16:14:12] 2025-05-17 20:13:58,715 | INFO     | mean y: 2100067.354477612
[2025-05-17 16:14:12] 2025-05-17 20:13:58,715 | INFO     | -- intersect: -7113612788.768587
[2025-05-17 16:14:12] 2025-05-17 20:13:58,715 | INFO     | intersect: -7113612788.768587
[2025-05-17 16:14:12] 2025-05-17 20:13:58,716 | INFO     | chi2: 0.13110076675995572
[2025-05-17 16:14:12] 2025-05-17 20:13:58,716 | INFO     | current chi2=0.13110076675995572 (change=1.4564219071396252 %)
[2025-05-17 16:14:12] 2025-05-17 20:13:58,716 | INFO     | left removable region: 40
[2025-05-17 16:14:12] 2025-05-17 20:13:58,716 | INFO     | sum of square deviations: 4394471031.904987
[2025-05-17 16:14:12] 2025-05-17 20:13:58,718 | INFO     | sum of deviations: 23449990593.574387
[2025-05-17 16:14:12] 2025-05-17 20:13:58,718 | INFO     | mean x: 1747505083.5495868
[2025-05-17 16:14:12] 2025-05-17 20:13:58,718 | INFO     | mean y: 2098778.243801653
[2025-05-17 16:14:12] 2025-05-17 20:13:58,718 | INFO     | -- intersect: -9323023056.430574
[2025-05-17 16:14:12] 2025-05-17 20:13:58,718 | INFO     | intersect: -9323023056.430574
[2025-05-17 16:14:12] 2025-05-17 20:13:58,718 | INFO     | chi2: 0.10971646616044825
[2025-05-17 16:14:12] 2025-05-17 20:13:58,718 | INFO     | -- intersect: -9323023056.430574
[2025-05-17 16:14:12] 2025-05-17 20:13:58,718 | INFO     | current memory leak: 5.34 B/s (using 242 data points, chi2=0.11)
[2025-05-17 16:14:12] 2025-05-17 20:13:58,719 | INFO     | ..............................
[2025-05-17 16:14:12] 2025-05-17 20:13:58,719 | INFO     | . Timing measurements:
[2025-05-17 16:14:12] 2025-05-17 20:13:58,719 | INFO     | . get job = 0 s
[2025-05-17 16:14:12] 2025-05-17 20:13:58,719 | INFO     | . initial setup = 1 s
[2025-05-17 16:14:12] 2025-05-17 20:13:58,719 | INFO     | . payload setup = 7 s
[2025-05-17 16:14:12] 2025-05-17 20:13:58,719 | INFO     | . stage-in = 0 s
[2025-05-17 16:14:12] 2025-05-17 20:13:58,719 | INFO     | . payload execution = 17541 s
[2025-05-17 16:14:12] 2025-05-17 20:13:58,720 | INFO     | . stage-out = 2 s
[2025-05-17 16:14:12] 2025-05-17 20:13:58,720 | INFO     | . log creation = 0 s
[2025-05-17 16:14:12] 2025-05-17 20:13:58,720 | INFO     | ..............................
[2025-05-17 16:14:12] 2025-05-17 20:13:58,795 | INFO     | 
[2025-05-17 16:14:12] 2025-05-17 20:13:58,800 | INFO     | job summary report
[2025-05-17 16:14:12] 2025-05-17 20:13:58,801 | INFO     | --------------------------------------------------
[2025-05-17 16:14:12] 2025-05-17 20:13:58,801 | INFO     | PanDA job id: 6653398718
[2025-05-17 16:14:12] 2025-05-17 20:13:58,801 | INFO     | task id: 44638099
[2025-05-17 16:14:12] 2025-05-17 20:13:58,801 | INFO     | errors: (none)
[2025-05-17 16:14:12] 2025-05-17 20:13:58,801 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 16:14:12] 2025-05-17 20:13:58,801 | INFO     | pilot state: finished 
[2025-05-17 16:14:12] 2025-05-17 20:13:58,801 | INFO     | transexitcode: 0
[2025-05-17 16:14:12] 2025-05-17 20:13:58,801 | INFO     | exeerrorcode: 0
[2025-05-17 16:14:12] 2025-05-17 20:13:58,801 | INFO     | exeerrordiag: 
[2025-05-17 16:14:12] 2025-05-17 20:13:58,801 | INFO     | exitcode: 0
[2025-05-17 16:14:12] 2025-05-17 20:13:58,801 | INFO     | exitmsg: OK
[2025-05-17 16:14:12] 2025-05-17 20:13:58,801 | INFO     | cpuconsumptiontime: 40867 s
[2025-05-17 16:14:12] 2025-05-17 20:13:58,801 | INFO     | nevents: 400
[2025-05-17 16:14:12] 2025-05-17 20:13:58,801 | INFO     | neventsw: 0
[2025-05-17 16:14:12] 2025-05-17 20:13:58,801 | INFO     | pid: 3772146
[2025-05-17 16:14:12] 2025-05-17 20:13:58,801 | INFO     | pgrp: 3772146
[2025-05-17 16:14:12] 2025-05-17 20:13:58,801 | INFO     | corecount: 8
[2025-05-17 16:14:12] 2025-05-17 20:13:58,801 | INFO     | event service: False
[2025-05-17 16:14:12] 2025-05-17 20:13:58,802 | INFO     | sizes: {0: 2393662, 6: 2393868, 11: 2393896, 17552: 2425841, 17555: 2434838, 17563: 2434952}
[2025-05-17 16:14:12] 2025-05-17 20:13:58,802 | INFO     | --------------------------------------------------
[2025-05-17 16:14:12] 2025-05-17 20:13:58,802 | INFO     | 
[2025-05-17 16:14:12] 2025-05-17 20:13:58,802 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-17 16:14:12] 2025-05-17 20:13:58,826 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 16:14:12] 2025-05-17 20:13:58,826 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 16:14:12] 2025-05-17 20:13:58,827 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 16:14:12] 2025-05-17 20:13:58,827 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 16:14:12] 2025-05-17 20:13:58,827 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 16:14:12] 2025-05-17 20:13:58,827 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 16:14:12] 2025-05-17 20:13:58,827 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 16:14:12] 2025-05-17 20:13:58,827 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 16:14:12] 2025-05-17 20:13:58,827 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 16:14:12] 2025-05-17 20:13:58,827 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 16:14:12] 2025-05-17 20:13:58,827 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 16:14:12] 2025-05-17 20:13:58,827 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 16:14:12] 2025-05-17 20:13:58,827 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 16:14:12] 2025-05-17 20:13:58,827 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 16:14:12] 2025-05-17 20:13:58,827 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 16:14:12] 2025-05-17 20:13:58,828 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 16:14:12] 2025-05-17 20:13:58,828 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 16:14:12] 2025-05-17 20:13:58,828 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 16:14:12] 2025-05-17 20:13:58,828 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 16:14:12] 2025-05-17 20:13:58,828 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 16:14:12] 2025-05-17 20:13:58,828 | INFO     | job 6653398718 has completed (purged errors)
[2025-05-17 16:14:12] 2025-05-17 20:13:58,828 | INFO     | overall cleanup function is called
[2025-05-17 16:14:12] 2025-05-17 20:13:59,837 | INFO     | --- collectZombieJob: --- 10, [3772146]
[2025-05-17 16:14:12] 2025-05-17 20:13:59,841 | INFO     | zombie collector waiting for pid 3772146
[2025-05-17 16:14:12] 2025-05-17 20:13:59,841 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 16:14:12] 2025-05-17 20:13:59,842 | INFO     | collected zombie processes
[2025-05-17 16:14:12] 2025-05-17 20:13:59,842 | INFO     | will attempt to kill all subprocesses of pid=3772146
[2025-05-17 16:14:12] 2025-05-17 20:14:00,460 | INFO     | process IDs to be killed: [3772146] (in reverse order)
[2025-05-17 16:14:12] 2025-05-17 20:14:00,625 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 16:14:12] 2025-05-17 20:14:00,626 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 16:14:12] 2025-05-17 20:14:00,649 | INFO     | did not find any defunct processes belonging to 3772146
[2025-05-17 16:14:12] 2025-05-17 20:14:00,670 | INFO     | did not find any defunct processes belonging to 3772146
[2025-05-17 16:14:12] 2025-05-17 20:14:00,670 | INFO     | ready for new job
[2025-05-17 16:14:12] 2025-05-17 20:14:00,670 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 16:14:12] 2025-05-17 20:14:00,672 | INFO     | **************************************
[2025-05-17 16:14:12] 2025-05-17 20:14:00,672 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 16:14:12] 2025-05-17 20:14:00,672 | INFO     | **************************************
[2025-05-17 16:14:12] 2025-05-17 20:14:00,672 | INFO     | 
[2025-05-17 16:14:12] 2025-05-17 20:14:00,677 | INFO     | architecture information:
[2025-05-17 16:14:12] 2025-05-17 20:14:00,677 | INFO     | executing command: cat /etc/os-release
[2025-05-17 16:14:12] 2025-05-17 20:14:00,695 | INFO     | cat /etc/os-release:
[2025-05-17 16:14:12] NAME="CentOS Linux"
[2025-05-17 16:14:12] VERSION="7 (Core)"
[2025-05-17 16:14:12] ID="centos"
[2025-05-17 16:14:12] ID_LIKE="rhel fedora"
[2025-05-17 16:14:12] VERSION_ID="7"
[2025-05-17 16:14:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 16:14:12] ANSI_COLOR="0;31"
[2025-05-17 16:14:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 16:14:12] HOME_URL="https://www.centos.org/"
[2025-05-17 16:14:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 16:14:12] 
[2025-05-17 16:14:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 16:14:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 16:14:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 16:14:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 16:14:12] 
[2025-05-17 16:14:12] 2025-05-17 20:14:00,695 | INFO     | **************************************
[2025-05-17 16:14:12] 2025-05-17 20:14:01,198 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-17 16:14:12] 2025-05-17 20:14:01,220 | INFO     | sufficient remaining disk space (75647418368 B)
[2025-05-17 16:14:12] 2025-05-17 20:14:01,221 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 16:14:12] 2025-05-17 20:14:01,221 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 16:14:12] 2025-05-17 20:14:01,221 | INFO     | update_server=False
[2025-05-17 16:14:12] 2025-05-17 20:14:01,221 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 16:14:12] 2025-05-17 20:14:01,423 | INFO     | all job control threads have been joined
[2025-05-17 16:14:12] 2025-05-17 20:14:01,499 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 16:14:12] 2025-05-17 20:14:01,553 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 16:14:12] 2025-05-17 20:14:01,609 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 16:14:12] 2025-05-17 20:14:01,609 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 16:14:12] 2025-05-17 20:14:01,609 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 16:14:12] 2025-05-17 20:14:02,095 | INFO     | all data control threads have been joined
[2025-05-17 16:14:12] 2025-05-17 20:14:02,112 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 16:14:12] 2025-05-17 20:14:02,113 | INFO     | aborting loop
[2025-05-17 16:14:12] 2025-05-17 20:14:02,226 | INFO     | [job] retrieve thread has finished
[2025-05-17 16:14:12] 2025-05-17 20:14:02,229 | INFO     | [payload] validate_post thread has finished
[2025-05-17 16:14:12] 2025-05-17 20:14:02,319 | INFO     | all payload control threads have been joined
[2025-05-17 16:14:12] 2025-05-17 20:14:02,357 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 16:14:12] 2025-05-17 20:14:02,424 | INFO     | [job] control thread has finished
[2025-05-17 16:14:12] 2025-05-17 20:14:02,602 | INFO     | [job] validate thread has finished
[2025-05-17 16:14:12] 2025-05-17 20:14:02,859 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 16:14:12] 2025-05-17 20:14:02,880 | INFO     | [data] copytool_in thread has finished
[2025-05-17 16:14:12] 2025-05-17 20:14:02,880 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 16:14:12] 2025-05-17 20:14:03,101 | INFO     | [data] control thread has finished
[2025-05-17 16:14:12] 2025-05-17 20:14:03,113 | INFO     | [payload] failed_post thread has finished
[2025-05-17 16:14:12] 2025-05-17 20:14:03,119 | INFO     | [job] job monitor thread has finished
[2025-05-17 16:14:12] 2025-05-17 20:14:03,325 | INFO     | [payload] control thread has finished
[2025-05-17 16:14:12] 2025-05-17 20:14:03,505 | INFO     | [data] copytool_out thread has finished
[2025-05-17 16:14:12] 2025-05-17 20:14:03,712 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 16:14:12] 2025-05-17 20:14:03,806 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 16:14:12] 2025-05-17 20:14:04,812 | INFO     | [job] queue monitor thread has finished
[2025-05-17 16:14:12] 2025-05-17 20:14:05,560 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 16:14:12] 2025-05-17 20:14:07,060 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140351843047232)>', '<ExcThread(monitor, started 140351100659456)>']
[2025-05-17 16:14:12] 2025-05-17 20:14:07,645 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 16:14:12] 2025-05-17 20:14:07,646 | INFO     | [monitor] control thread has ended
[2025-05-17 16:14:12] 2025-05-17 20:14:12,085 | INFO     | all workflow threads have been joined
[2025-05-17 16:14:12] 2025-05-17 20:14:12,085 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 16:14:12] 2025-05-17 20:14:12,085 | INFO     | traces error code: 0
[2025-05-17 16:14:12] 2025-05-17 20:14:12,086 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 16:14:12] 2025-05-17 20:14:12,229 [wrapper] ==== pilot stdout END ====
[2025-05-17 16:14:12] 2025-05-17 20:14:12,232 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 16:14:12] 2025-05-17 20:14:12,236 [wrapper] pilotpid: 3732781
[2025-05-17 16:14:12] 2025-05-17 20:14:12,241 [wrapper] Pilot exit status: 0
[2025-05-17 16:14:12] 2025-05-17 20:14:12,251 [wrapper] pandaids: 6653398718 6653398718
[2025-05-17 16:14:12] 2025-05-17 20:14:12,370 [wrapper] cleanup supervisor_pilot 2359047 3732782
[2025-05-17 16:14:12] 2025-05-17 20:14:12,373 [wrapper] Test setup, not cleaning
[2025-05-17 16:14:12] 2025-05-17 20:14:12,376 [wrapper] apfmon messages muted
[2025-05-17 16:14:12] 2025-05-17 20:14:12,379 [wrapper] ==== wrapper stdout END ====
[2025-05-17 16:14:12] 2025-05-17 20:14:12,381 [wrapper] ==== wrapper stderr END ====
[2025-05-17 16:14:12]  *** Error codes and diagnostics ***
[2025-05-17 16:14:12]     "exeErrorCode": 0,
[2025-05-17 16:14:12]     "exeErrorDiag": "",
[2025-05-17 16:14:12]     "pilotErrorCode": 0,
[2025-05-17 16:14:12]     "pilotErrorDiag": "",
[2025-05-17 16:14:12]  *** Listing of results directory ***
[2025-05-17 16:14:12] total 628476
[2025-05-17 16:14:12] drwx------. 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-05-17 16:14:12] -rw-r--r--. 1 boincer umatlas    495897 May 17 06:09 pilot3.tar.gz
[2025-05-17 16:14:12] -rw-r--r--. 1 boincer umatlas      5111 May 17 06:11 queuedata.json
[2025-05-17 16:14:12] -rwx------. 1 boincer umatlas     37140 May 17 06:12 runpilot2-wrapper.sh
[2025-05-17 16:14:12] -rw-r--r--. 1 boincer umatlas       100 May 17 08:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 16:14:12] -rwxr-xr-x. 1 boincer umatlas      7986 May 17 08:48 run_atlas
[2025-05-17 16:14:12] -rw-r--r--. 1 boincer umatlas       105 May 17 08:48 job.xml
[2025-05-17 16:14:12] -rw-r--r--. 3 boincer umatlas 221018746 May 17 08:48 EVNT.44638096._002168.pool.root.1
[2025-05-17 16:14:12] -rw-r--r--. 3 boincer umatlas 221018746 May 17 08:48 ATLAS.root_0
[2025-05-17 16:14:12] -rw-r--r--. 2 boincer umatlas     17569 May 17 08:48 start_atlas.sh
[2025-05-17 16:14:12] drwxrwx--x. 2 boincer umatlas      4096 May 17 08:48 shared
[2025-05-17 16:14:12] -rw-r--r--. 2 boincer umatlas    508875 May 17 08:48 input.tar.gz
[2025-05-17 16:14:12] -rw-r--r--. 1 boincer umatlas         0 May 17 08:48 boinc_lockfile
[2025-05-17 16:14:12] -rw-r--r--. 1 boincer umatlas      2539 May 17 11:20 pandaJob.out
[2025-05-17 16:14:12] -rw-------. 1 boincer umatlas       467 May 17 11:20 setup.sh.local
[2025-05-17 16:14:12] -rw-------. 1 boincer umatlas    994619 May 17 11:20 agis_schedconf.cvmfs.json
[2025-05-17 16:14:12] -rw-r--r--. 1 boincer umatlas      6933 May 17 16:09 init_data.xml
[2025-05-17 16:14:12] -rw-------. 1 boincer umatlas        96 May 17 16:13 pilot_heartbeat.json
[2025-05-17 16:14:12] -rw-------. 1 boincer umatlas 193912552 May 17 16:13 HITS.44638099._054099.pool.root.1
[2025-05-17 16:14:12] -rw-r--r--. 1 boincer umatlas       531 May 17 16:13 boinc_task_state.xml
[2025-05-17 16:14:12] -rw-------. 1 boincer umatlas      1042 May 17 16:13 memory_monitor_summary.json
[2025-05-17 16:14:12] -rw-------. 1 boincer umatlas   1596741 May 17 16:13 agis_ddmendpoints.agis.ALL.json
[2025-05-17 16:14:12] -rw-------. 1 boincer umatlas    429209 May 17 16:13 log.44638099._054099.job.log.tgz.1
[2025-05-17 16:14:12] -rw-------. 1 boincer umatlas      7720 May 17 16:13 heartbeat.json
[2025-05-17 16:14:12] -rw-r--r--. 1 boincer umatlas      8192 May 17 16:13 boinc_mmap_file
[2025-05-17 16:14:12] -rw-r--r--. 1 boincer umatlas        28 May 17 16:13 wrapper_checkpoint.txt
[2025-05-17 16:14:12] -rw-------. 1 boincer umatlas      4353 May 17 16:14 pilotlog.txt
[2025-05-17 16:14:12] -rw-------. 1 boincer umatlas   1458054 May 17 16:14 log.44638099._054099.job.log.1
[2025-05-17 16:14:12] -rw-------. 1 boincer umatlas       357 May 17 16:14 output.list
[2025-05-17 16:14:12] -rw-r--r--. 1 boincer umatlas       620 May 17 16:14 runtime_log
[2025-05-17 16:14:12] -rw-------. 1 boincer umatlas   1904640 May 17 16:14 result.tar.gz
[2025-05-17 16:14:12] -rw-r--r--. 1 boincer umatlas     11499 May 17 16:14 runtime_log.err
[2025-05-17 16:14:12] -rw-------. 1 boincer umatlas       782 May 17 16:14 PauNDmDiTa7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmcJOKDm3cHZsn.diag
[2025-05-17 16:14:12] -rw-r--r--. 1 boincer umatlas     23062 May 17 16:14 stderr.txt
[2025-05-17 16:14:12] HITS file was successfully produced:
[2025-05-17 16:14:12] -rw-------. 1 boincer umatlas 193912552 May 17 16:13 shared/HITS.pool.root.1
[2025-05-17 16:14:12]  *** Contents of shared directory: ***
[2025-05-17 16:14:12] total 407592
[2025-05-17 16:14:12] -rw-r--r--. 3 boincer umatlas 221018746 May 17 08:48 ATLAS.root_0
[2025-05-17 16:14:12] -rw-r--r--. 2 boincer umatlas     17569 May 17 08:48 start_atlas.sh
[2025-05-17 16:14:12] -rw-r--r--. 2 boincer umatlas    508875 May 17 08:48 input.tar.gz
[2025-05-17 16:14:12] -rw-------. 1 boincer umatlas 193912552 May 17 16:13 HITS.pool.root.1
[2025-05-17 16:14:12] -rw-------. 1 boincer umatlas   1904640 May 17 16:14 result.tar.gz
16:14:13 (3708689): run_atlas exited; CPU time 41727.063423
16:14:13 (3708689): called boinc_finish(0)

</stderr_txt>
]]>

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