Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:40:46 (1056203): wrapper (7.7.26015): starting
08:40:46 (1056203): wrapper: running run_atlas (--nthreads 8)
[2025-05-17 08:40:46] Arguments: --nthreads 8
[2025-05-17 08:40:46] Threads: 8
[2025-05-17 08:40:46] Checking for CVMFS
[2025-05-17 08:40:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 08:40:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 08:40:47] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 08:40:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 08:40:47] 2.12.6.0 4867 11406 250088 146101 1 324 37930419 40960001 33293 16776704 0 94354366 99.699 86416243 23391 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-17 08:40:47] CVMFS is ok
[2025-05-17 08:40:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-17 08:40:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-17 08:40:47] Further information can be found at the LHC@home message board.
[2025-05-17 08:40:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 08:40:47] Checking for apptainer binary...
[2025-05-17 08:40:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 08:40:47] Running /usr/bin/apptainer --version
[2025-05-17 08:40:47] apptainer version 1.4.0-1.el9
[2025-05-17 08:40:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 08:40:47] c7-3-35.aglt2.org
[2025-05-17 08:40:47] apptainer works
[2025-05-17 08:40:47] Set ATHENA_PROC_NUMBER=8
[2025-05-17 08:40:47] Set ATHENA_CORE_NUMBER=8
[2025-05-17 08:40:47] Starting ATLAS job with PandaID=6653398565
[2025-05-17 08:40:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 17:10:19]  *** The last 200 lines of the pilot log: ***
[2025-05-17 17:10:19] 2025-05-17 21:09:59,061 | INFO     | mean x: 1747501073.6538463
[2025-05-17 17:10:19] 2025-05-17 21:09:59,061 | INFO     | mean y: 2050984.5020242915
[2025-05-17 17:10:19] 2025-05-17 21:09:59,061 | INFO     | -- intersect: -15975579308.78076
[2025-05-17 17:10:19] 2025-05-17 21:09:59,061 | INFO     | intersect: -15975579308.78076
[2025-05-17 17:10:19] 2025-05-17 21:09:59,061 | INFO     | chi2: 3.2228027396317454
[2025-05-17 17:10:19] 2025-05-17 21:09:59,061 | INFO     | current chi2=3.2228027396317454 (change=46.821132325349986 %)
[2025-05-17 17:10:19] 2025-05-17 21:09:59,062 | INFO     | sum of square deviations: 36256822370.18804
[2025-05-17 17:10:19] 2025-05-17 21:09:59,126 | INFO     | sum of deviations: 258447498887.9918
[2025-05-17 17:10:19] 2025-05-17 21:09:59,139 | INFO     | mean x: 1747501226.155419
[2025-05-17 17:10:19] 2025-05-17 21:09:59,139 | INFO     | mean y: 2062292.2106339468
[2025-05-17 17:10:19] 2025-05-17 21:09:59,139 | INFO     | -- intersect: -12454553916.244608
[2025-05-17 17:10:19] 2025-05-17 21:09:59,139 | INFO     | intersect: -12454553916.244608
[2025-05-17 17:10:19] 2025-05-17 21:09:59,140 | INFO     | chi2: 1.8357885670946736
[2025-05-17 17:10:19] 2025-05-17 21:09:59,140 | INFO     | current chi2=1.8357885670946736 (change=43.037513760322774 %)
[2025-05-17 17:10:19] 2025-05-17 21:09:59,140 | INFO     | sum of square deviations: 35155922735.066315
[2025-05-17 17:10:19] 2025-05-17 21:09:59,418 | INFO     | sum of deviations: 186429128275.5455
[2025-05-17 17:10:19] 2025-05-17 21:09:59,418 | INFO     | mean x: 1747501378.6570249
[2025-05-17 17:10:19] 2025-05-17 21:09:59,418 | INFO     | mean y: 2072262.0454545454
[2025-05-17 17:10:19] 2025-05-17 21:09:59,418 | INFO     | -- intersect: -9264791848.973549
[2025-05-17 17:10:19] 2025-05-17 21:09:59,418 | INFO     | intersect: -9264791848.973549
[2025-05-17 17:10:19] 2025-05-17 21:09:59,419 | INFO     | chi2: 0.788772486294011
[2025-05-17 17:10:19] 2025-05-17 21:09:59,419 | INFO     | current chi2=0.788772486294011 (change=57.0335876128521 %)
[2025-05-17 17:10:19] 2025-05-17 21:09:59,419 | INFO     | sum of square deviations: 34077564429.25675
[2025-05-17 17:10:19] 2025-05-17 21:09:59,506 | INFO     | sum of deviations: 142972940798.54074
[2025-05-17 17:10:19] 2025-05-17 21:09:59,506 | INFO     | mean x: 1747501531.1565762
[2025-05-17 17:10:19] 2025-05-17 21:09:59,507 | INFO     | mean y: 2078396.9394572026
[2025-05-17 17:10:19] 2025-05-17 21:09:59,507 | INFO     | -- intersect: -7329590903.490583
[2025-05-17 17:10:19] 2025-05-17 21:09:59,507 | INFO     | intersect: -7329590903.490583
[2025-05-17 17:10:19] 2025-05-17 21:09:59,609 | INFO     | chi2: 0.4042956080656933
[2025-05-17 17:10:19] 2025-05-17 21:09:59,610 | INFO     | current chi2=0.4042956080656933 (change=48.743697949551176 %)
[2025-05-17 17:10:19] 2025-05-17 21:09:59,610 | INFO     | sum of square deviations: 33021602728.162476
[2025-05-17 17:10:19] 2025-05-17 21:09:59,635 | INFO     | sum of deviations: 119488177103.49797
[2025-05-17 17:10:19] 2025-05-17 21:09:59,636 | INFO     | mean x: 1747501683.6476793
[2025-05-17 17:10:19] 2025-05-17 21:09:59,636 | INFO     | mean y: 2081780.9071729959
[2025-05-17 17:10:19] 2025-05-17 21:09:59,636 | INFO     | -- intersect: -6321227005.261306
[2025-05-17 17:10:19] 2025-05-17 21:09:59,636 | INFO     | intersect: -6321227005.261306
[2025-05-17 17:10:19] 2025-05-17 21:09:59,636 | INFO     | chi2: 0.2931301226659137
[2025-05-17 17:10:19] 2025-05-17 21:09:59,636 | INFO     | current chi2=0.2931301226659137 (change=27.496090281969256 %)
[2025-05-17 17:10:19] 2025-05-17 21:09:59,658 | INFO     | sum of square deviations: 31987659282.71206
[2025-05-17 17:10:19] 2025-05-17 21:09:59,689 | INFO     | sum of deviations: 119032650751.75693
[2025-05-17 17:10:19] 2025-05-17 21:09:59,689 | INFO     | mean x: 1747501836.140725
[2025-05-17 17:10:19] 2025-05-17 21:09:59,689 | INFO     | mean y: 2081847.185501066
[2025-05-17 17:10:19] 2025-05-17 21:09:59,689 | INFO     | -- intersect: -6500731438.118344
[2025-05-17 17:10:19] 2025-05-17 21:09:59,690 | INFO     | intersect: -6500731438.118344
[2025-05-17 17:10:19] 2025-05-17 21:09:59,690 | INFO     | chi2: 0.28965453007444475
[2025-05-17 17:10:19] 2025-05-17 21:09:59,690 | INFO     | current chi2=0.28965453007444475 (change=1.1856825084572287 %)
[2025-05-17 17:10:19] 2025-05-17 21:09:59,690 | INFO     | left removable region: 60
[2025-05-17 17:10:19] 2025-05-17 21:09:59,691 | INFO     | sum of square deviations: 25172343633.833782
[2025-05-17 17:10:19] 2025-05-17 21:09:59,708 | INFO     | sum of deviations: 104685507671.605
[2025-05-17 17:10:19] 2025-05-17 21:09:59,731 | INFO     | mean x: 1747502568.1454966
[2025-05-17 17:10:19] 2025-05-17 21:09:59,731 | INFO     | mean y: 2085929.7205542724
[2025-05-17 17:10:19] 2025-05-17 21:09:59,731 | INFO     | -- intersect: -7265342012.819537
[2025-05-17 17:10:19] 2025-05-17 21:09:59,732 | INFO     | intersect: -7265342012.819537
[2025-05-17 17:10:19] 2025-05-17 21:09:59,732 | INFO     | chi2: 0.23888821420499545
[2025-05-17 17:10:19] 2025-05-17 21:09:59,732 | INFO     | -- intersect: -7265342012.819537
[2025-05-17 17:10:19] 2025-05-17 21:09:59,732 | INFO     | current memory leak: 4.16 B/s (using 433 data points, chi2=0.24)
[2025-05-17 17:10:19] 2025-05-17 21:09:59,733 | INFO     | ..............................
[2025-05-17 17:10:19] 2025-05-17 21:09:59,733 | INFO     | . Timing measurements:
[2025-05-17 17:10:19] 2025-05-17 21:09:59,733 | INFO     | . get job = 0 s
[2025-05-17 17:10:19] 2025-05-17 21:09:59,733 | INFO     | . initial setup = 4 s
[2025-05-17 17:10:19] 2025-05-17 21:09:59,733 | INFO     | . payload setup = 18 s
[2025-05-17 17:10:19] 2025-05-17 21:09:59,734 | INFO     | . stage-in = 0 s
[2025-05-17 17:10:19] 2025-05-17 21:09:59,734 | INFO     | . payload execution = 30452 s
[2025-05-17 17:10:19] 2025-05-17 21:09:59,734 | INFO     | . stage-out = 6 s
[2025-05-17 17:10:19] 2025-05-17 21:09:59,734 | INFO     | . log creation = 0 s
[2025-05-17 17:10:19] 2025-05-17 21:09:59,734 | INFO     | ..............................
[2025-05-17 17:10:19] 2025-05-17 21:10:00,429 | INFO     | 
[2025-05-17 17:10:19] 2025-05-17 21:10:00,429 | INFO     | job summary report
[2025-05-17 17:10:19] 2025-05-17 21:10:00,429 | INFO     | --------------------------------------------------
[2025-05-17 17:10:19] 2025-05-17 21:10:00,430 | INFO     | PanDA job id: 6653398565
[2025-05-17 17:10:19] 2025-05-17 21:10:00,430 | INFO     | task id: 44638099
[2025-05-17 17:10:19] 2025-05-17 21:10:00,430 | INFO     | errors: (none)
[2025-05-17 17:10:19] 2025-05-17 21:10:00,430 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 17:10:19] 2025-05-17 21:10:00,430 | INFO     | pilot state: finished 
[2025-05-17 17:10:19] 2025-05-17 21:10:00,430 | INFO     | transexitcode: 0
[2025-05-17 17:10:19] 2025-05-17 21:10:00,430 | INFO     | exeerrorcode: 0
[2025-05-17 17:10:19] 2025-05-17 21:10:00,430 | INFO     | exeerrordiag: 
[2025-05-17 17:10:19] 2025-05-17 21:10:00,430 | INFO     | exitcode: 0
[2025-05-17 17:10:19] 2025-05-17 21:10:00,430 | INFO     | exitmsg: OK
[2025-05-17 17:10:19] 2025-05-17 21:10:00,430 | INFO     | cpuconsumptiontime: 41746 s
[2025-05-17 17:10:19] 2025-05-17 21:10:00,430 | INFO     | nevents: 400
[2025-05-17 17:10:19] 2025-05-17 21:10:00,430 | INFO     | neventsw: 0
[2025-05-17 17:10:19] 2025-05-17 21:10:00,430 | INFO     | pid: 1091939
[2025-05-17 17:10:19] 2025-05-17 21:10:00,431 | INFO     | pgrp: 1091939
[2025-05-17 17:10:19] 2025-05-17 21:10:00,431 | INFO     | corecount: 8
[2025-05-17 17:10:19] 2025-05-17 21:10:00,431 | INFO     | event service: False
[2025-05-17 17:10:19] 2025-05-17 21:10:00,431 | INFO     | sizes: {0: 2393541, 1: 2393740, 10: 2393946, 11: 2393974, 30476: 2431352, 30477: 2431351, 30484: 2440476, 30488: 2440532, 30501: 2440702}
[2025-05-17 17:10:19] 2025-05-17 21:10:00,431 | INFO     | --------------------------------------------------
[2025-05-17 17:10:19] 2025-05-17 21:10:00,431 | INFO     | 
[2025-05-17 17:10:19] 2025-05-17 21:10:00,431 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-05-17 17:10:19] 2025-05-17 21:10:00,712 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 17:10:19] 2025-05-17 21:10:00,713 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 17:10:19] 2025-05-17 21:10:00,713 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 17:10:19] 2025-05-17 21:10:00,713 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 17:10:19] 2025-05-17 21:10:00,713 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 17:10:19] 2025-05-17 21:10:00,713 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 17:10:19] 2025-05-17 21:10:00,713 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 17:10:19] 2025-05-17 21:10:00,713 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 17:10:19] 2025-05-17 21:10:00,713 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 17:10:19] 2025-05-17 21:10:00,713 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 17:10:19] 2025-05-17 21:10:00,713 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 17:10:19] 2025-05-17 21:10:00,713 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 17:10:19] 2025-05-17 21:10:00,714 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 17:10:19] 2025-05-17 21:10:00,714 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 17:10:19] 2025-05-17 21:10:00,714 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 17:10:19] 2025-05-17 21:10:00,714 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 17:10:19] 2025-05-17 21:10:00,714 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 17:10:19] 2025-05-17 21:10:00,714 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 17:10:19] 2025-05-17 21:10:00,714 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 17:10:19] 2025-05-17 21:10:00,714 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 17:10:19] 2025-05-17 21:10:00,714 | INFO     | job 6653398565 has completed (purged errors)
[2025-05-17 17:10:19] 2025-05-17 21:10:00,714 | INFO     | overall cleanup function is called
[2025-05-17 17:10:19] 2025-05-17 21:10:01,886 | INFO     | --- collectZombieJob: --- 10, [1091939]
[2025-05-17 17:10:19] 2025-05-17 21:10:01,886 | INFO     | zombie collector waiting for pid 1091939
[2025-05-17 17:10:19] 2025-05-17 21:10:01,886 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 17:10:19] 2025-05-17 21:10:01,886 | INFO     | collected zombie processes
[2025-05-17 17:10:19] 2025-05-17 21:10:01,887 | INFO     | will attempt to kill all subprocesses of pid=1091939
[2025-05-17 17:10:19] 2025-05-17 21:10:05,693 | INFO     | process IDs to be killed: [1091939] (in reverse order)
[2025-05-17 17:10:19] 2025-05-17 21:10:05,956 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 17:10:19] 2025-05-17 21:10:05,956 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 17:10:19] 2025-05-17 21:10:06,071 | INFO     | did not find any defunct processes belonging to 1091939
[2025-05-17 17:10:19] 2025-05-17 21:10:06,204 | INFO     | did not find any defunct processes belonging to 1091939
[2025-05-17 17:10:19] 2025-05-17 21:10:06,205 | INFO     | ready for new job
[2025-05-17 17:10:19] 2025-05-17 21:10:06,205 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 17:10:19] 2025-05-17 21:10:06,219 | INFO     | **************************************
[2025-05-17 17:10:19] 2025-05-17 21:10:06,220 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 17:10:19] 2025-05-17 21:10:06,220 | INFO     | **************************************
[2025-05-17 17:10:19] 2025-05-17 21:10:06,220 | INFO     | 
[2025-05-17 17:10:19] 2025-05-17 21:10:06,237 | INFO     | architecture information:
[2025-05-17 17:10:19] 2025-05-17 21:10:06,242 | INFO     | executing command: cat /etc/os-release
[2025-05-17 17:10:19] 2025-05-17 21:10:06,273 | INFO     | cat /etc/os-release:
[2025-05-17 17:10:19] NAME="CentOS Linux"
[2025-05-17 17:10:19] VERSION="7 (Core)"
[2025-05-17 17:10:19] ID="centos"
[2025-05-17 17:10:19] ID_LIKE="rhel fedora"
[2025-05-17 17:10:19] VERSION_ID="7"
[2025-05-17 17:10:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 17:10:19] ANSI_COLOR="0;31"
[2025-05-17 17:10:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 17:10:19] HOME_URL="https://www.centos.org/"
[2025-05-17 17:10:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 17:10:19] 
[2025-05-17 17:10:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 17:10:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 17:10:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 17:10:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 17:10:19] 
[2025-05-17 17:10:19] 2025-05-17 21:10:06,273 | INFO     | **************************************
[2025-05-17 17:10:19] 2025-05-17 21:10:06,776 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-05-17 17:10:19] 2025-05-17 21:10:06,857 | INFO     | sufficient remaining disk space (126889230336 B)
[2025-05-17 17:10:19] 2025-05-17 21:10:06,858 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 17:10:19] 2025-05-17 21:10:06,858 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 17:10:19] 2025-05-17 21:10:06,858 | INFO     | update_server=False
[2025-05-17 17:10:19] 2025-05-17 21:10:06,858 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 17:10:19] 2025-05-17 21:10:06,858 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 17:10:19] 2025-05-17 21:10:07,170 | INFO     | all payload control threads have been joined
[2025-05-17 17:10:19] 2025-05-17 21:10:07,194 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 17:10:19] 2025-05-17 21:10:07,419 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 17:10:19] 2025-05-17 21:10:07,419 | INFO     | aborting loop
[2025-05-17 17:10:19] 2025-05-17 21:10:07,522 | INFO     | all data control threads have been joined
[2025-05-17 17:10:19] 2025-05-17 21:10:07,677 | INFO     | all job control threads have been joined
[2025-05-17 17:10:19] 2025-05-17 21:10:07,959 | INFO     | [job] retrieve thread has finished
[2025-05-17 17:10:19] 2025-05-17 21:10:08,192 | INFO     | [payload] control thread has finished
[2025-05-17 17:10:19] 2025-05-17 21:10:08,428 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 17:10:19] 2025-05-17 21:10:08,429 | INFO     | [job] job monitor thread has finished
[2025-05-17 17:10:19] 2025-05-17 21:10:08,429 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 17:10:19] 2025-05-17 21:10:08,540 | INFO     | [data] control thread has finished
[2025-05-17 17:10:19] 2025-05-17 21:10:08,682 | INFO     | [job] control thread has finished
[2025-05-17 17:10:19] 2025-05-17 21:10:08,917 | INFO     | PID=1065765 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-17 17:10:19] 2025-05-17 21:10:08,917 | INFO     | .. there are 74 such processes running
[2025-05-17 17:10:19] 2025-05-17 21:10:08,917 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 17:10:19] 2025-05-17 21:10:08,918 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 17:10:19] 2025-05-17 21:10:08,918 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 17:10:19] 2025-05-17 21:10:08,991 | INFO     | [payload] failed_post thread has finished
[2025-05-17 17:10:19] 2025-05-17 21:10:08,992 | INFO     | [data] copytool_out thread has finished
[2025-05-17 17:10:19] 2025-05-17 21:10:09,021 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 17:10:19] 2025-05-17 21:10:09,048 | INFO     | [payload] validate_post thread has finished
[2025-05-17 17:10:19] 2025-05-17 21:10:09,198 | INFO     | [job] validate thread has finished
[2025-05-17 17:10:19] 2025-05-17 21:10:09,199 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 17:10:19] 2025-05-17 21:10:09,355 | INFO     | [data] copytool_in thread has finished
[2025-05-17 17:10:19] 2025-05-17 21:10:09,643 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 17:10:19] 2025-05-17 21:10:10,648 | INFO     | [job] queue monitor thread has finished
[2025-05-17 17:10:19] 2025-05-17 21:10:11,210 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 17:10:19] 2025-05-17 21:10:13,019 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140197667710784)>', '<ExcThread(monitor, started 140197152925440)>']
[2025-05-17 17:10:19] 2025-05-17 21:10:13,945 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 17:10:19] 2025-05-17 21:10:13,945 | INFO     | [monitor] control thread has ended
[2025-05-17 17:10:19] 2025-05-17 21:10:18,066 | INFO     | all workflow threads have been joined
[2025-05-17 17:10:19] 2025-05-17 21:10:18,066 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 17:10:19] 2025-05-17 21:10:18,066 | INFO     | traces error code: 0
[2025-05-17 17:10:19] 2025-05-17 21:10:18,067 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 17:10:19] 2025-05-17 21:10:19,446 [wrapper] ==== pilot stdout END ====
[2025-05-17 17:10:19] 2025-05-17 21:10:19,456 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 17:10:19] 2025-05-17 21:10:19,463 [wrapper] pilotpid: 1065765
[2025-05-17 17:10:19] 2025-05-17 21:10:19,470 [wrapper] Pilot exit status: 0
[2025-05-17 17:10:19] 2025-05-17 21:10:19,497 [wrapper] pandaids: 6653398565
[2025-05-17 17:10:19] 2025-05-17 21:10:19,663 [wrapper] cleanup supervisor_pilot 2923204 1065766
[2025-05-17 17:10:19] 2025-05-17 21:10:19,671 [wrapper] Test setup, not cleaning
[2025-05-17 17:10:19] 2025-05-17 21:10:19,675 [wrapper] apfmon messages muted
[2025-05-17 17:10:19] 2025-05-17 21:10:19,684 [wrapper] ==== wrapper stdout END ====
[2025-05-17 17:10:19] 2025-05-17 21:10:19,695 [wrapper] ==== wrapper stderr END ====
[2025-05-17 17:10:19]  *** Error codes and diagnostics ***
[2025-05-17 17:10:19]     "exeErrorCode": 0,
[2025-05-17 17:10:19]     "exeErrorDiag": "",
[2025-05-17 17:10:19]     "pilotErrorCode": 0,
[2025-05-17 17:10:19]     "pilotErrorDiag": "",
[2025-05-17 17:10:19]  *** Listing of results directory ***
[2025-05-17 17:10:19] total 419140
[2025-05-17 17:10:19] -rw-r--r--. 1 boincer umatlas    495897 May 17 06:01 pilot3.tar.gz
[2025-05-17 17:10:19] -rw-r--r--. 1 boincer umatlas      5111 May 17 06:04 queuedata.json
[2025-05-17 17:10:19] -rwx------. 1 boincer umatlas     37140 May 17 06:04 runpilot2-wrapper.sh
[2025-05-17 17:10:19] -rw-r--r--. 1 boincer umatlas       100 May 17 08:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 17:10:19] -rwxr-xr-x. 1 boincer umatlas      7986 May 17 08:40 run_atlas
[2025-05-17 17:10:19] -rw-r--r--. 1 boincer umatlas       105 May 17 08:40 job.xml
[2025-05-17 17:10:19] -rw-r--r--. 2 boincer umatlas 222589094 May 17 08:40 EVNT.44638096._002162.pool.root.1
[2025-05-17 17:10:19] -rw-r--r--. 2 boincer umatlas     17569 May 17 08:40 start_atlas.sh
[2025-05-17 17:10:19] drwxrwx--x. 2 boincer umatlas      4096 May 17 08:40 shared
[2025-05-17 17:10:19] -rw-r--r--. 2 boincer umatlas    508876 May 17 08:40 input.tar.gz
[2025-05-17 17:10:19] -rw-r--r--. 1 boincer umatlas         0 May 17 08:40 boinc_lockfile
[2025-05-17 17:10:19] -rw-r--r--. 1 boincer umatlas      2539 May 17 08:40 pandaJob.out
[2025-05-17 17:10:19] -rw-------. 1 boincer umatlas       467 May 17 08:40 setup.sh.local
[2025-05-17 17:10:19] -rw-------. 1 boincer umatlas    994651 May 17 08:41 agis_schedconf.cvmfs.json
[2025-05-17 17:10:19] drwx------. 4 boincer umatlas      4096 May 17 08:41 pilot3
[2025-05-17 17:10:19] -rw-r--r--. 1 boincer umatlas      6934 May 17 17:00 init_data.xml
[2025-05-17 17:10:19] -rw-------. 1 boincer umatlas 197105187 May 17 17:08 HITS.44638099._053946.pool.root.1
[2025-05-17 17:10:19] -rw-r--r--. 1 boincer umatlas       530 May 17 17:09 boinc_task_state.xml
[2025-05-17 17:10:19] -rw-------. 1 boincer umatlas      1042 May 17 17:09 memory_monitor_summary.json
[2025-05-17 17:10:19] -rw-------. 1 boincer umatlas   1596741 May 17 17:09 agis_ddmendpoints.agis.ALL.json
[2025-05-17 17:10:19] -rw-------. 1 boincer umatlas    531788 May 17 17:09 log.44638099._053946.job.log.tgz.1
[2025-05-17 17:10:19] -rw-------. 1 boincer umatlas        95 May 17 17:09 pilot_heartbeat.json
[2025-05-17 17:10:19] -rw-------. 1 boincer umatlas      7708 May 17 17:09 heartbeat.json
[2025-05-17 17:10:19] -rw-r--r--. 1 boincer umatlas        28 May 17 17:10 wrapper_checkpoint.txt
[2025-05-17 17:10:19] -rw-r--r--. 1 boincer umatlas      8192 May 17 17:10 boinc_mmap_file
[2025-05-17 17:10:19] -rw-------. 1 boincer umatlas      4749 May 17 17:10 pilotlog.txt
[2025-05-17 17:10:19] -rw-------. 1 boincer umatlas   2298090 May 17 17:10 log.44638099._053946.job.log.1
[2025-05-17 17:10:19] -rw-------. 1 boincer umatlas       357 May 17 17:10 output.list
[2025-05-17 17:10:19] -rw-r--r--. 1 boincer umatlas       620 May 17 17:10 runtime_log
[2025-05-17 17:10:19] -rw-------. 1 boincer umatlas   2846720 May 17 17:10 result.tar.gz
[2025-05-17 17:10:19] -rw-r--r--. 1 boincer umatlas     11414 May 17 17:10 runtime_log.err
[2025-05-17 17:10:19] -rw-------. 1 boincer umatlas       661 May 17 17:10 bfQKDmcaTa7n9Rq4apOajLDm4fhM0noT9bVof3QYDmJNKKDmBIR2yn.diag
[2025-05-17 17:10:19] -rw-r--r--. 1 boincer umatlas     20984 May 17 17:10 stderr.txt
[2025-05-17 17:10:19] HITS file was successfully produced:
[2025-05-17 17:10:19] -rw-------. 1 boincer umatlas 197105187 May 17 17:08 shared/HITS.pool.root.1
[2025-05-17 17:10:19]  *** Contents of shared directory: ***
[2025-05-17 17:10:19] total 413172
[2025-05-17 17:10:19] -rw-r--r--. 2 boincer umatlas 222589094 May 17 08:40 ATLAS.root_0
[2025-05-17 17:10:19] -rw-r--r--. 2 boincer umatlas     17569 May 17 08:40 start_atlas.sh
[2025-05-17 17:10:19] -rw-r--r--. 2 boincer umatlas    508876 May 17 08:40 input.tar.gz
[2025-05-17 17:10:19] -rw-------. 1 boincer umatlas 197105187 May 17 17:08 HITS.pool.root.1
[2025-05-17 17:10:19] -rw-------. 1 boincer umatlas   2846720 May 17 17:10 result.tar.gz
17:10:20 (1056203): run_atlas exited; CPU time 43231.543025
17:10:20 (1056203): called boinc_finish(0)

</stderr_txt>
]]>

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