Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:16:58 (1442330): wrapper (7.7.26015): starting
08:16:58 (1442330): wrapper: running run_atlas (--nthreads 8)
[2025-05-17 08:16:58] Arguments: --nthreads 8
[2025-05-17 08:16:58] Threads: 8
[2025-05-17 08:16:58] Checking for CVMFS
[2025-05-17 08:16:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 08:16:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 08:16:59] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 08:16:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 08:16:59] 2.12.6.0 863165 6867 262092 146101 3 79 28734036 40960000 20169 16776704 1 23985786 99.497 34309066 26741 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-17 08:16:59] CVMFS is ok
[2025-05-17 08:16:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-17 08:16:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-17 08:16:59] Further information can be found at the LHC@home message board.
[2025-05-17 08:16:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 08:16:59] Checking for apptainer binary...
[2025-05-17 08:16:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 08:16:59] Running /usr/bin/apptainer --version
[2025-05-17 08:16:59] apptainer version 1.4.0-1.el9
[2025-05-17 08:16:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 08:16:59] c7-11-14.aglt2.org
[2025-05-17 08:16:59] apptainer works
[2025-05-17 08:16:59] Set ATHENA_PROC_NUMBER=8
[2025-05-17 08:16:59] Set ATHENA_CORE_NUMBER=8
[2025-05-17 08:16:59] Starting ATLAS job with PandaID=6653398083
[2025-05-17 08:16:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 10:04:49]  *** The last 200 lines of the pilot log: ***
[2025-05-17 10:04:49] 2025-05-17 14:04:31,469 | INFO     | mean x: 1747487430.047619
[2025-05-17 10:04:49] 2025-05-17 14:04:31,469 | INFO     | mean y: 2155516.314285714
[2025-05-17 10:04:49] 2025-05-17 14:04:31,496 | INFO     | -- intersect: -99508918189.21944
[2025-05-17 10:04:49] 2025-05-17 14:04:31,496 | INFO     | intersect: -99508918189.21944
[2025-05-17 10:04:49] 2025-05-17 14:04:31,497 | INFO     | chi2: 4.1551047035260025
[2025-05-17 10:04:49] 2025-05-17 14:04:31,497 | INFO     | sum of square deviations: 310045804.7500002
[2025-05-17 10:04:49] 2025-05-17 14:04:31,498 | INFO     | sum of deviations: 21991148825.650013
[2025-05-17 10:04:49] 2025-05-17 14:04:31,498 | INFO     | mean x: 1747487277.55
[2025-05-17 10:04:49] 2025-05-17 14:04:31,498 | INFO     | mean y: 2160260.37
[2025-05-17 10:04:49] 2025-05-17 14:04:31,498 | INFO     | -- intersect: -123944857253.76393
[2025-05-17 10:04:49] 2025-05-17 14:04:31,498 | INFO     | intersect: -123944857253.76393
[2025-05-17 10:04:49] 2025-05-17 14:04:31,498 | INFO     | chi2: 4.106839087834491
[2025-05-17 10:04:49] 2025-05-17 14:04:31,498 | INFO     | current chi2=4.106839087834491 (change=1.1615980615495392 %)
[2025-05-17 10:04:49] 2025-05-17 14:04:31,498 | INFO     | right removable region: 99
[2025-05-17 10:04:49] 2025-05-17 14:04:31,498 | INFO     | sum of square deviations: 310042754.7500002
[2025-05-17 10:04:49] 2025-05-17 14:04:31,499 | INFO     | sum of deviations: 58306941.60000193
[2025-05-17 10:04:49] 2025-05-17 14:04:31,499 | INFO     | mean x: 1747487582.55
[2025-05-17 10:04:49] 2025-05-17 14:04:31,499 | INFO     | mean y: 2218692.08
[2025-05-17 10:04:49] 2025-05-17 14:04:31,499 | INFO     | -- intersect: -326415520.01319957
[2025-05-17 10:04:49] 2025-05-17 14:04:31,499 | INFO     | intersect: -326415520.01319957
[2025-05-17 10:04:49] 2025-05-17 14:04:31,499 | INFO     | chi2: 1.8180470092578385
[2025-05-17 10:04:49] 2025-05-17 14:04:31,500 | INFO     | current chi2=1.8180470092578385 (change=56.245458562932185 %)
[2025-05-17 10:04:49] 2025-05-17 14:04:31,500 | INFO     | sum of square deviations: 265817144.73684216
[2025-05-17 10:04:49] 2025-05-17 14:04:31,500 | INFO     | sum of deviations: -13325852559.894735
[2025-05-17 10:04:49] 2025-05-17 14:04:31,500 | INFO     | mean x: 1747487735.0526316
[2025-05-17 10:04:49] 2025-05-17 14:04:31,500 | INFO     | mean y: 2264879.3789473684
[2025-05-17 10:04:49] 2025-05-17 14:04:31,500 | INFO     | -- intersect: 87606711652.70338
[2025-05-17 10:04:49] 2025-05-17 14:04:31,500 | INFO     | intersect: 87606711652.70338
[2025-05-17 10:04:49] 2025-05-17 14:04:31,501 | INFO     | chi2: 0.743220636304593
[2025-05-17 10:04:49] 2025-05-17 14:04:31,549 | INFO     | current chi2=0.743220636304593 (change=59.11983394708865 %)
[2025-05-17 10:04:49] 2025-05-17 14:04:31,549 | INFO     | sum of square deviations: 226015894.32222202
[2025-05-17 10:04:49] 2025-05-17 14:04:31,550 | INFO     | sum of deviations: -21096922213.85556
[2025-05-17 10:04:49] 2025-05-17 14:04:31,550 | INFO     | mean x: 1747487887.5444446
[2025-05-17 10:04:49] 2025-05-17 14:04:31,550 | INFO     | mean y: 2293944.5888888887
[2025-05-17 10:04:49] 2025-05-17 14:04:31,550 | INFO     | -- intersect: 163117441858.12735
[2025-05-17 10:04:49] 2025-05-17 14:04:31,550 | INFO     | intersect: 163117441858.12735
[2025-05-17 10:04:49] 2025-05-17 14:04:31,550 | INFO     | chi2: 0.07925615571523571
[2025-05-17 10:04:49] 2025-05-17 14:04:31,550 | INFO     | current chi2=0.07925615571523571 (change=89.33612014471107 %)
[2025-05-17 10:04:49] 2025-05-17 14:04:31,550 | INFO     | sum of square deviations: 190400768.89411813
[2025-05-17 10:04:49] 2025-05-17 14:04:31,551 | INFO     | sum of deviations: -19017357661.8
[2025-05-17 10:04:49] 2025-05-17 14:04:31,551 | INFO     | mean x: 1747488040.035294
[2025-05-17 10:04:49] 2025-05-17 14:04:31,551 | INFO     | mean y: 2284987.6
[2025-05-17 10:04:49] 2025-05-17 14:04:31,551 | INFO     | -- intersect: 174542573139.21832
[2025-05-17 10:04:49] 2025-05-17 14:04:31,551 | INFO     | intersect: 174542573139.21832
[2025-05-17 10:04:49] 2025-05-17 14:04:31,551 | INFO     | chi2: 0.0701992932515521
[2025-05-17 10:04:49] 2025-05-17 14:04:31,551 | INFO     | current chi2=0.0701992932515521 (change=11.427330006043409 %)
[2025-05-17 10:04:49] 2025-05-17 14:04:31,551 | INFO     | left removable region: 40
[2025-05-17 10:04:49] 2025-05-17 14:04:31,552 | INFO     | sum of square deviations: 63660946.847457595
[2025-05-17 10:04:49] 2025-05-17 14:04:31,552 | INFO     | sum of deviations: -5064711756.288136
[2025-05-17 10:04:49] 2025-05-17 14:04:31,552 | INFO     | mean x: 1747488467.0508475
[2025-05-17 10:04:49] 2025-05-17 14:04:31,552 | INFO     | mean y: 2228438.7627118644
[2025-05-17 10:04:49] 2025-05-17 14:04:31,552 | INFO     | -- intersect: 139028206237.3292
[2025-05-17 10:04:49] 2025-05-17 14:04:31,552 | INFO     | intersect: 139028206237.3292
[2025-05-17 10:04:49] 2025-05-17 14:04:31,552 | INFO     | chi2: 0.038005397239413104
[2025-05-17 10:04:49] 2025-05-17 14:04:31,552 | INFO     | -- intersect: 139028206237.3292
[2025-05-17 10:04:49] 2025-05-17 14:04:31,552 | INFO     | current memory leak: -79.56 B/s (using 59 data points, chi2=0.04)
[2025-05-17 10:04:49] 2025-05-17 14:04:31,557 | INFO     | ..............................
[2025-05-17 10:04:49] 2025-05-17 14:04:31,557 | INFO     | . Timing measurements:
[2025-05-17 10:04:49] 2025-05-17 14:04:31,557 | INFO     | . get job = 0 s
[2025-05-17 10:04:49] 2025-05-17 14:04:31,557 | INFO     | . initial setup = 2 s
[2025-05-17 10:04:49] 2025-05-17 14:04:31,557 | INFO     | . payload setup = 6 s
[2025-05-17 10:04:49] 2025-05-17 14:04:31,557 | INFO     | . stage-in = 0 s
[2025-05-17 10:04:49] 2025-05-17 14:04:31,557 | INFO     | . payload execution = 6393 s
[2025-05-17 10:04:49] 2025-05-17 14:04:31,557 | INFO     | . stage-out = 2 s
[2025-05-17 10:04:49] 2025-05-17 14:04:31,558 | INFO     | . log creation = 0 s
[2025-05-17 10:04:49] 2025-05-17 14:04:31,558 | INFO     | ..............................
[2025-05-17 10:04:49] 2025-05-17 14:04:31,692 | INFO     | 
[2025-05-17 10:04:49] 2025-05-17 14:04:31,692 | INFO     | job summary report
[2025-05-17 10:04:49] 2025-05-17 14:04:31,692 | INFO     | --------------------------------------------------
[2025-05-17 10:04:49] 2025-05-17 14:04:31,692 | INFO     | PanDA job id: 6653398083
[2025-05-17 10:04:49] 2025-05-17 14:04:31,692 | INFO     | task id: 44638099
[2025-05-17 10:04:49] 2025-05-17 14:04:31,692 | INFO     | errors: (none)
[2025-05-17 10:04:49] 2025-05-17 14:04:31,692 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 10:04:49] 2025-05-17 14:04:31,692 | INFO     | pilot state: finished 
[2025-05-17 10:04:49] 2025-05-17 14:04:31,692 | INFO     | transexitcode: 0
[2025-05-17 10:04:49] 2025-05-17 14:04:31,693 | INFO     | exeerrorcode: 0
[2025-05-17 10:04:49] 2025-05-17 14:04:31,693 | INFO     | exeerrordiag: 
[2025-05-17 10:04:49] 2025-05-17 14:04:31,693 | INFO     | exitcode: 0
[2025-05-17 10:04:49] 2025-05-17 14:04:31,693 | INFO     | exitmsg: OK
[2025-05-17 10:04:49] 2025-05-17 14:04:31,693 | INFO     | cpuconsumptiontime: 40429 s
[2025-05-17 10:04:49] 2025-05-17 14:04:31,693 | INFO     | nevents: 400
[2025-05-17 10:04:49] 2025-05-17 14:04:31,693 | INFO     | neventsw: 0
[2025-05-17 10:04:49] 2025-05-17 14:04:31,693 | INFO     | pid: 1454926
[2025-05-17 10:04:49] 2025-05-17 14:04:31,693 | INFO     | pgrp: 1454926
[2025-05-17 10:04:49] 2025-05-17 14:04:31,693 | INFO     | corecount: 8
[2025-05-17 10:04:49] 2025-05-17 14:04:31,693 | INFO     | event service: False
[2025-05-17 10:04:49] 2025-05-17 14:04:31,693 | INFO     | sizes: {0: 2393539, 1: 2393738, 5: 2393944, 11: 2394000, 6401: 2415957, 6405: 2424898, 6407: 2425082, 6425: 2425252}
[2025-05-17 10:04:49] 2025-05-17 14:04:31,693 | INFO     | --------------------------------------------------
[2025-05-17 10:04:49] 2025-05-17 14:04:31,693 | INFO     | 
[2025-05-17 10:04:49] 2025-05-17 14:04:31,694 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-05-17 10:04:49] 2025-05-17 14:04:31,890 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 10:04:49] 2025-05-17 14:04:31,891 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 10:04:49] 2025-05-17 14:04:31,891 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 10:04:49] 2025-05-17 14:04:31,891 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 10:04:49] 2025-05-17 14:04:31,891 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 10:04:49] 2025-05-17 14:04:31,891 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 10:04:49] 2025-05-17 14:04:31,891 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 10:04:49] 2025-05-17 14:04:31,891 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 10:04:49] 2025-05-17 14:04:31,891 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 10:04:49] 2025-05-17 14:04:31,891 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 10:04:49] 2025-05-17 14:04:31,891 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 10:04:49] 2025-05-17 14:04:31,891 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 10:04:49] 2025-05-17 14:04:31,891 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 10:04:49] 2025-05-17 14:04:31,891 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 10:04:49] 2025-05-17 14:04:31,892 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 10:04:49] 2025-05-17 14:04:31,892 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 10:04:49] 2025-05-17 14:04:31,892 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 10:04:49] 2025-05-17 14:04:31,892 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 10:04:49] 2025-05-17 14:04:31,892 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 10:04:49] 2025-05-17 14:04:31,892 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 10:04:49] 2025-05-17 14:04:31,892 | INFO     | job 6653398083 has completed (purged errors)
[2025-05-17 10:04:49] 2025-05-17 14:04:31,892 | INFO     | overall cleanup function is called
[2025-05-17 10:04:49] 2025-05-17 14:04:32,933 | INFO     | --- collectZombieJob: --- 10, [1454926]
[2025-05-17 10:04:49] 2025-05-17 14:04:32,933 | INFO     | zombie collector waiting for pid 1454926
[2025-05-17 10:04:49] 2025-05-17 14:04:32,933 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 10:04:49] 2025-05-17 14:04:32,933 | INFO     | collected zombie processes
[2025-05-17 10:04:49] 2025-05-17 14:04:32,933 | INFO     | will attempt to kill all subprocesses of pid=1454926
[2025-05-17 10:04:49] 2025-05-17 14:04:34,750 | INFO     | process IDs to be killed: [1454926] (in reverse order)
[2025-05-17 10:04:49] 2025-05-17 14:04:35,012 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 10:04:49] 2025-05-17 14:04:35,012 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 10:04:49] 2025-05-17 14:04:35,029 | INFO     | did not find any defunct processes belonging to 1454926
[2025-05-17 10:04:49] 2025-05-17 14:04:35,046 | INFO     | did not find any defunct processes belonging to 1454926
[2025-05-17 10:04:49] 2025-05-17 14:04:35,046 | INFO     | ready for new job
[2025-05-17 10:04:49] 2025-05-17 14:04:35,047 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 10:04:49] 2025-05-17 14:04:35,049 | INFO     | **************************************
[2025-05-17 10:04:49] 2025-05-17 14:04:35,049 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 10:04:49] 2025-05-17 14:04:35,049 | INFO     | **************************************
[2025-05-17 10:04:49] 2025-05-17 14:04:35,049 | INFO     | 
[2025-05-17 10:04:49] 2025-05-17 14:04:35,066 | INFO     | architecture information:
[2025-05-17 10:04:49] 2025-05-17 14:04:35,075 | INFO     | executing command: cat /etc/os-release
[2025-05-17 10:04:49] 2025-05-17 14:04:35,178 | INFO     | cat /etc/os-release:
[2025-05-17 10:04:49] NAME="CentOS Linux"
[2025-05-17 10:04:49] VERSION="7 (Core)"
[2025-05-17 10:04:49] ID="centos"
[2025-05-17 10:04:49] ID_LIKE="rhel fedora"
[2025-05-17 10:04:49] VERSION_ID="7"
[2025-05-17 10:04:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 10:04:49] ANSI_COLOR="0;31"
[2025-05-17 10:04:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 10:04:49] HOME_URL="https://www.centos.org/"
[2025-05-17 10:04:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 10:04:49] 
[2025-05-17 10:04:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 10:04:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 10:04:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 10:04:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 10:04:49] 
[2025-05-17 10:04:49] 2025-05-17 14:04:35,178 | INFO     | **************************************
[2025-05-17 10:04:49] 2025-05-17 14:04:35,682 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-05-17 10:04:49] 2025-05-17 14:04:35,755 | INFO     | sufficient remaining disk space (85001764864 B)
[2025-05-17 10:04:49] 2025-05-17 14:04:35,755 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 10:04:49] 2025-05-17 14:04:35,755 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 10:04:49] 2025-05-17 14:04:35,755 | INFO     | update_server=False
[2025-05-17 10:04:49] 2025-05-17 14:04:35,755 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 10:04:49] 2025-05-17 14:04:35,756 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 10:04:49] 2025-05-17 14:04:35,756 | INFO     | aborting loop
[2025-05-17 10:04:49] 2025-05-17 14:04:35,756 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 10:04:49] 2025-05-17 14:04:36,369 | INFO     | all data control threads have been joined
[2025-05-17 10:04:49] 2025-05-17 14:04:36,662 | INFO     | all payload control threads have been joined
[2025-05-17 10:04:49] 2025-05-17 14:04:36,738 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 10:04:49] 2025-05-17 14:04:36,768 | INFO     | [job] job monitor thread has finished
[2025-05-17 10:04:49] 2025-05-17 14:04:36,792 | INFO     | [job] retrieve thread has finished
[2025-05-17 10:04:49] 2025-05-17 14:04:36,811 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 10:04:49] 2025-05-17 14:04:36,918 | INFO     | PID=1448295 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-17 10:04:49] 2025-05-17 14:04:36,918 | INFO     | .. there are 33 such processes running
[2025-05-17 10:04:49] 2025-05-17 14:04:36,918 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 10:04:49] 2025-05-17 14:04:36,918 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 10:04:49] 2025-05-17 14:04:36,918 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 10:04:49] 2025-05-17 14:04:36,920 | INFO     | [payload] failed_post thread has finished
[2025-05-17 10:04:49] 2025-05-17 14:04:36,926 | INFO     | [payload] validate_post thread has finished
[2025-05-17 10:04:49] 2025-05-17 14:04:37,086 | INFO     | all job control threads have been joined
[2025-05-17 10:04:49] 2025-05-17 14:04:37,375 | INFO     | [data] control thread has finished
[2025-05-17 10:04:49] 2025-05-17 14:04:37,376 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 10:04:49] 2025-05-17 14:04:37,395 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 10:04:49] 2025-05-17 14:04:37,429 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 10:04:49] 2025-05-17 14:04:37,610 | INFO     | [job] validate thread has finished
[2025-05-17 10:04:49] 2025-05-17 14:04:37,668 | INFO     | [payload] control thread has finished
[2025-05-17 10:04:49] 2025-05-17 14:04:37,744 | INFO     | [job] queue monitor thread has finished
[2025-05-17 10:04:49] 2025-05-17 14:04:37,798 | INFO     | [data] copytool_out thread has finished
[2025-05-17 10:04:49] 2025-05-17 14:04:38,092 | INFO     | [job] control thread has finished
[2025-05-17 10:04:49] 2025-05-17 14:04:38,260 | INFO     | [data] copytool_in thread has finished
[2025-05-17 10:04:49] 2025-05-17 14:04:38,454 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 10:04:49] 2025-05-17 14:04:42,477 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 10:04:49] 2025-05-17 14:04:44,030 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139837582473024)>', '<ExcThread(monitor, started 139836946114304)>']
[2025-05-17 10:04:49] 2025-05-17 14:04:44,965 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 10:04:49] 2025-05-17 14:04:44,965 | INFO     | [monitor] control thread has ended
[2025-05-17 10:04:49] 2025-05-17 14:04:49,056 | INFO     | all workflow threads have been joined
[2025-05-17 10:04:49] 2025-05-17 14:04:49,056 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 10:04:49] 2025-05-17 14:04:49,060 | INFO     | traces error code: 0
[2025-05-17 10:04:49] 2025-05-17 14:04:49,060 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 10:04:49] 2025-05-17 14:04:49,450 [wrapper] ==== pilot stdout END ====
[2025-05-17 10:04:49] 2025-05-17 14:04:49,456 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 10:04:49] 2025-05-17 14:04:49,468 [wrapper] pilotpid: 1448295
[2025-05-17 10:04:49] 2025-05-17 14:04:49,471 [wrapper] Pilot exit status: 0
[2025-05-17 10:04:49] 2025-05-17 14:04:49,561 [wrapper] pandaids: 6653398083
[2025-05-17 10:04:49] 2025-05-17 14:04:49,775 [wrapper] cleanup supervisor_pilot 2303457 1448296
[2025-05-17 10:04:49] 2025-05-17 14:04:49,812 [wrapper] Test setup, not cleaning
[2025-05-17 10:04:49] 2025-05-17 14:04:49,816 [wrapper] apfmon messages muted
[2025-05-17 10:04:49] 2025-05-17 14:04:49,820 [wrapper] ==== wrapper stdout END ====
[2025-05-17 10:04:49] 2025-05-17 14:04:49,823 [wrapper] ==== wrapper stderr END ====
[2025-05-17 10:04:49]  *** Error codes and diagnostics ***
[2025-05-17 10:04:50]     "exeErrorCode": 0,
[2025-05-17 10:04:50]     "exeErrorDiag": "",
[2025-05-17 10:04:50]     "pilotErrorCode": 0,
[2025-05-17 10:04:50]     "pilotErrorDiag": "",
[2025-05-17 10:04:50]  *** Listing of results directory ***
[2025-05-17 10:04:50] total 406112
[2025-05-17 10:04:50] -rw-r--r--. 1 boincer umatlas    495897 May 17 05:42 pilot3.tar.gz
[2025-05-17 10:04:50] -rwx------. 1 boincer umatlas     37140 May 17 05:43 runpilot2-wrapper.sh
[2025-05-17 10:04:50] -rw-r--r--. 1 boincer umatlas      5111 May 17 05:43 queuedata.json
[2025-05-17 10:04:50] -rw-r--r--. 1 boincer umatlas       100 May 17 08:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 10:04:50] -rwxr-xr-x. 1 boincer umatlas      7986 May 17 08:16 run_atlas
[2025-05-17 10:04:50] -rw-r--r--. 1 boincer umatlas       105 May 17 08:16 job.xml
[2025-05-17 10:04:50] -rw-r--r--. 2 boincer umatlas 220568863 May 17 08:16 EVNT.44638096._002153.pool.root.1
[2025-05-17 10:04:50] -rw-r--r--. 2 boincer umatlas     17569 May 17 08:16 start_atlas.sh
[2025-05-17 10:04:50] drwxrwx--x. 2 boincer umatlas      4096 May 17 08:16 shared
[2025-05-17 10:04:50] -rw-r--r--. 2 boincer umatlas    508875 May 17 08:16 input.tar.gz
[2025-05-17 10:04:50] -rw-r--r--. 1 boincer umatlas         0 May 17 08:16 boinc_lockfile
[2025-05-17 10:04:50] -rw-r--r--. 1 boincer umatlas      2538 May 17 08:16 pandaJob.out
[2025-05-17 10:04:50] -rw-------. 1 boincer umatlas       467 May 17 08:16 setup.sh.local
[2025-05-17 10:04:50] -rw-------. 1 boincer umatlas    994651 May 17 08:17 agis_schedconf.cvmfs.json
[2025-05-17 10:04:50] -rw-------. 1 boincer umatlas   1596741 May 17 08:17 agis_ddmendpoints.agis.ALL.json
[2025-05-17 10:04:50] drwx------. 4 boincer umatlas      4096 May 17 08:17 pilot3
[2025-05-17 10:04:50] -rw-r--r--. 1 boincer umatlas      6895 May 17 10:00 init_data.xml
[2025-05-17 10:04:50] -rw-------. 1 boincer umatlas 189619257 May 17 10:03 HITS.44638099._053705.pool.root.1
[2025-05-17 10:04:50] -rw-r--r--. 1 boincer umatlas       529 May 17 10:03 boinc_task_state.xml
[2025-05-17 10:04:50] -rw-------. 1 boincer umatlas      1032 May 17 10:04 memory_monitor_summary.json
[2025-05-17 10:04:50] -rw-------. 1 boincer umatlas    311393 May 17 10:04 log.44638099._053705.job.log.tgz.1
[2025-05-17 10:04:50] -rw-------. 1 boincer umatlas        95 May 17 10:04 pilot_heartbeat.json
[2025-05-17 10:04:50] -rw-------. 1 boincer umatlas      6088 May 17 10:04 heartbeat.json
[2025-05-17 10:04:50] -rw-r--r--. 1 boincer umatlas      8192 May 17 10:04 boinc_mmap_file
[2025-05-17 10:04:50] -rw-r--r--. 1 boincer umatlas        27 May 17 10:04 wrapper_checkpoint.txt
[2025-05-17 10:04:50] -rw-------. 1 boincer umatlas      4748 May 17 10:04 pilotlog.txt
[2025-05-17 10:04:50] -rw-------. 1 boincer umatlas    605813 May 17 10:04 log.44638099._053705.job.log.1
[2025-05-17 10:04:50] -rw-------. 1 boincer umatlas       357 May 17 10:04 output.list
[2025-05-17 10:04:50] -rw-r--r--. 1 boincer umatlas       620 May 17 10:04 runtime_log
[2025-05-17 10:04:50] -rw-------. 1 boincer umatlas    931840 May 17 10:04 result.tar.gz
[2025-05-17 10:04:50] -rw-r--r--. 1 boincer umatlas     11418 May 17 10:04 runtime_log.err
[2025-05-17 10:04:50] -rw-------. 1 boincer umatlas       653 May 17 10:04 1VIODm5FTa7n9Rq4apOajLDm4fhM0noT9bVof3QYDmKLKKDmCm2jOm.diag
[2025-05-17 10:04:50] -rw-r--r--. 1 boincer umatlas     20889 May 17 10:04 stderr.txt
[2025-05-17 10:04:50] HITS file was successfully produced:
[2025-05-17 10:04:50] -rw-------. 1 boincer umatlas 189619257 May 17 10:03 shared/HITS.pool.root.1
[2025-05-17 10:04:50]  *** Contents of shared directory: ***
[2025-05-17 10:04:50] total 402012
[2025-05-17 10:04:50] -rw-r--r--. 2 boincer umatlas 220568863 May 17 08:16 ATLAS.root_0
[2025-05-17 10:04:50] -rw-r--r--. 2 boincer umatlas     17569 May 17 08:16 start_atlas.sh
[2025-05-17 10:04:50] -rw-r--r--. 2 boincer umatlas    508875 May 17 08:16 input.tar.gz
[2025-05-17 10:04:50] -rw-------. 1 boincer umatlas 189619257 May 17 10:03 HITS.pool.root.1
[2025-05-17 10:04:50] -rw-------. 1 boincer umatlas    931840 May 17 10:04 result.tar.gz
10:04:51 (1442330): run_atlas exited; CPU time 40556.757918
10:04:51 (1442330): called boinc_finish(0)

</stderr_txt>
]]>

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