Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:04:25 (1918021): wrapper (7.7.26015): starting
08:04:25 (1918021): wrapper: running run_atlas (--nthreads 8)
[2025-05-17 08:04:25] Arguments: --nthreads 8
[2025-05-17 08:04:25] Threads: 8
[2025-05-17 08:04:25] Checking for CVMFS
[2025-05-17 08:04:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 08:04:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 08:04:25] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 08:04:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 08:04:26] 2.12.6.0 14765 6844 311844 146100 0 608 20732831 32935937 29929 16776704 1 75905756 99.701 57066836 19217 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-17 08:04:26] CVMFS is ok
[2025-05-17 08:04:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-17 08:04:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-17 08:04:26] Further information can be found at the LHC@home message board.
[2025-05-17 08:04:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 08:04:26] Checking for apptainer binary...
[2025-05-17 08:04:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 08:04:26] Running /usr/bin/apptainer --version
[2025-05-17 08:04:26] apptainer version 1.4.0-1.el9
[2025-05-17 08:04:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 08:04:26] c7-7-35.aglt2.org
[2025-05-17 08:04:26] apptainer works
[2025-05-17 08:04:26] Set ATHENA_PROC_NUMBER=8
[2025-05-17 08:04:26] Set ATHENA_CORE_NUMBER=8
[2025-05-17 08:04:26] Starting ATLAS job with PandaID=6653397967
[2025-05-17 08:04:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
11:20:04 (1918021): BOINC client no longer exists - exiting
11:20:04 (1918021): timer handler: client dead, exiting
11:20:47 (3708678): wrapper (7.7.26015): starting
11:20:47 (3708678): wrapper: running run_atlas (--nthreads 8)
[2025-05-17 11:20:47] Arguments: --nthreads 8
[2025-05-17 11:20:47] Threads: 8
[2025-05-17 11:20:47] This job has been restarted, cleaning up previous attempt
[2025-05-17 11:20:47] Checking for CVMFS
[2025-05-17 11:20:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 11:20:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 11:20:47] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 11:20:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 11:20:47] 2.12.6.0 14765 7041 287400 146106 0 195 22022829 32935937 23525 16776704 1 77629118 99.706 57446880 19236 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-17 11:20:47] CVMFS is ok
[2025-05-17 11:20:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-17 11:20:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-17 11:20:47] Further information can be found at the LHC@home message board.
[2025-05-17 11:20:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 11:20:47] Checking for apptainer binary...
[2025-05-17 11:20:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 11:20:47] Running /usr/bin/apptainer --version
[2025-05-17 11:20:47] apptainer version 1.4.0-1.el9
[2025-05-17 11:20:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 11:20:47] c7-7-35.aglt2.org
[2025-05-17 11:20:47] apptainer works
[2025-05-17 11:20:47] Set ATHENA_PROC_NUMBER=8
[2025-05-17 11:20:47] Set ATHENA_CORE_NUMBER=8
[2025-05-17 11:20:47] Starting ATLAS job with PandaID=6653397967
[2025-05-17 11:20:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 14:38:56]  *** The last 200 lines of the pilot log: ***
[2025-05-17 14:38:56] 2025-05-17 18:38:33,804 | INFO     | mean x: 1747501179.6134021
[2025-05-17 14:38:56] 2025-05-17 18:38:33,804 | INFO     | mean y: 2007815.1391752576
[2025-05-17 14:38:56] 2025-05-17 18:38:33,804 | INFO     | -- intersect: -62880809105.66999
[2025-05-17 14:38:56] 2025-05-17 18:38:33,804 | INFO     | intersect: -62880809105.66999
[2025-05-17 14:38:56] 2025-05-17 18:38:33,804 | INFO     | chi2: 7.283883969172084
[2025-05-17 14:38:56] 2025-05-17 18:38:33,805 | INFO     | sum of square deviations: 2093288219.439159
[2025-05-17 14:38:56] 2025-05-17 18:38:33,806 | INFO     | sum of deviations: 111699864084.68245
[2025-05-17 14:38:56] 2025-05-17 18:38:33,806 | INFO     | mean x: 1747501027.1164021
[2025-05-17 14:38:56] 2025-05-17 18:38:33,806 | INFO     | mean y: 2034579.650793651
[2025-05-17 14:38:56] 2025-05-17 18:38:33,806 | INFO     | -- intersect: -93246293770.0127
[2025-05-17 14:38:56] 2025-05-17 18:38:33,806 | INFO     | intersect: -93246293770.0127
[2025-05-17 14:38:56] 2025-05-17 18:38:33,806 | INFO     | chi2: 4.9910712682313
[2025-05-17 14:38:56] 2025-05-17 18:38:33,806 | INFO     | current chi2=4.9910712682313 (change=31.477886120162818 %)
[2025-05-17 14:38:56] 2025-05-17 18:38:33,807 | INFO     | sum of square deviations: 1931505849.3695605
[2025-05-17 14:38:56] 2025-05-17 18:38:33,808 | INFO     | sum of deviations: 108445725718.45654
[2025-05-17 14:38:56] 2025-05-17 18:38:33,808 | INFO     | mean x: 1747500874.6195652
[2025-05-17 14:38:56] 2025-05-17 18:38:33,808 | INFO     | mean y: 2031520.206521739
[2025-05-17 14:38:56] 2025-05-17 18:38:33,808 | INFO     | -- intersect: -98112608206.9326
[2025-05-17 14:38:56] 2025-05-17 18:38:33,808 | INFO     | intersect: -98112608206.9326
[2025-05-17 14:38:56] 2025-05-17 18:38:33,808 | INFO     | chi2: 4.973560287533596
[2025-05-17 14:38:56] 2025-05-17 18:38:33,808 | INFO     | current chi2=4.973560287533596 (change=0.3508461361624573 %)
[2025-05-17 14:38:56] 2025-05-17 18:38:33,808 | INFO     | right removable region: 183
[2025-05-17 14:38:56] 2025-05-17 18:38:33,809 | INFO     | sum of square deviations: 2093274799.439159
[2025-05-17 14:38:56] 2025-05-17 18:38:33,810 | INFO     | sum of deviations: 40314700229.93122
[2025-05-17 14:38:56] 2025-05-17 18:38:33,810 | INFO     | mean x: 1747501332.1164021
[2025-05-17 14:38:56] 2025-05-17 18:38:33,810 | INFO     | mean y: 2044510.9576719576
[2025-05-17 14:38:56] 2025-05-17 18:38:33,810 | INFO     | -- intersect: -33653351509.934357
[2025-05-17 14:38:56] 2025-05-17 18:38:33,810 | INFO     | intersect: -33653351509.934357
[2025-05-17 14:38:56] 2025-05-17 18:38:33,810 | INFO     | chi2: 4.690922304488575
[2025-05-17 14:38:56] 2025-05-17 18:38:33,810 | INFO     | current chi2=4.690922304488575 (change=35.59861298804071 %)
[2025-05-17 14:38:56] 2025-05-17 18:38:33,810 | INFO     | sum of square deviations: 1931479009.3695605
[2025-05-17 14:38:56] 2025-05-17 18:38:33,811 | INFO     | sum of deviations: 9103337471.521769
[2025-05-17 14:38:56] 2025-05-17 18:38:33,811 | INFO     | mean x: 1747501484.6195652
[2025-05-17 14:38:56] 2025-05-17 18:38:33,811 | INFO     | mean y: 2073945.0217391304
[2025-05-17 14:38:56] 2025-05-17 18:38:33,811 | INFO     | -- intersect: -8234151076.998899
[2025-05-17 14:38:56] 2025-05-17 18:38:33,812 | INFO     | intersect: -8234151076.998899
[2025-05-17 14:38:56] 2025-05-17 18:38:33,812 | INFO     | chi2: 3.3201093601314238
[2025-05-17 14:38:56] 2025-05-17 18:38:33,812 | INFO     | current chi2=3.3201093601314238 (change=29.22267424991179 %)
[2025-05-17 14:38:56] 2025-05-17 18:38:33,812 | INFO     | sum of square deviations: 1778241519.296088
[2025-05-17 14:38:56] 2025-05-17 18:38:33,813 | INFO     | sum of deviations: -12935659026.134087
[2025-05-17 14:38:56] 2025-05-17 18:38:33,813 | INFO     | mean x: 1747501637.122905
[2025-05-17 14:38:56] 2025-05-17 18:38:33,813 | INFO     | mean y: 2095734.6424581006
[2025-05-17 14:38:56] 2025-05-17 18:38:33,813 | INFO     | -- intersect: 12714140234.863756
[2025-05-17 14:38:56] 2025-05-17 18:38:33,813 | INFO     | intersect: 12714140234.863756
[2025-05-17 14:38:56] 2025-05-17 18:38:33,813 | INFO     | chi2: 2.494621256058869
[2025-05-17 14:38:56] 2025-05-17 18:38:33,813 | INFO     | current chi2=2.494621256058869 (change=24.863280528803976 %)
[2025-05-17 14:38:56] 2025-05-17 18:38:33,813 | INFO     | left removable region: 30
[2025-05-17 14:38:56] 2025-05-17 18:38:33,814 | INFO     | sum of square deviations: 1110480978.7189567
[2025-05-17 14:38:56] 2025-05-17 18:38:33,814 | INFO     | sum of deviations: 7733790635.281045
[2025-05-17 14:38:56] 2025-05-17 18:38:33,814 | INFO     | mean x: 1747501759.0915034
[2025-05-17 14:38:56] 2025-05-17 18:38:33,814 | INFO     | mean y: 2138191.908496732
[2025-05-17 14:38:56] 2025-05-17 18:38:33,814 | INFO     | -- intersect: -12168095246.209116
[2025-05-17 14:38:56] 2025-05-17 18:38:33,814 | INFO     | intersect: -12168095246.209116
[2025-05-17 14:38:56] 2025-05-17 18:38:33,815 | INFO     | chi2: 0.05915463722290867
[2025-05-17 14:38:56] 2025-05-17 18:38:33,815 | INFO     | -- intersect: -12168095246.209116
[2025-05-17 14:38:56] 2025-05-17 18:38:33,815 | INFO     | current memory leak: 6.96 B/s (using 153 data points, chi2=0.06)
[2025-05-17 14:38:56] 2025-05-17 18:38:33,815 | INFO     | ..............................
[2025-05-17 14:38:56] 2025-05-17 18:38:33,815 | INFO     | . Timing measurements:
[2025-05-17 14:38:56] 2025-05-17 18:38:33,815 | INFO     | . get job = 0 s
[2025-05-17 14:38:56] 2025-05-17 18:38:33,815 | INFO     | . initial setup = 1 s
[2025-05-17 14:38:56] 2025-05-17 18:38:33,816 | INFO     | . payload setup = 7 s
[2025-05-17 14:38:56] 2025-05-17 18:38:33,816 | INFO     | . stage-in = 0 s
[2025-05-17 14:38:56] 2025-05-17 18:38:33,816 | INFO     | . payload execution = 11797 s
[2025-05-17 14:38:56] 2025-05-17 18:38:33,816 | INFO     | . stage-out = 2 s
[2025-05-17 14:38:56] 2025-05-17 18:38:33,816 | INFO     | . log creation = 0 s
[2025-05-17 14:38:56] 2025-05-17 18:38:33,816 | INFO     | ..............................
[2025-05-17 14:38:56] 2025-05-17 18:38:34,002 | INFO     | 
[2025-05-17 14:38:56] 2025-05-17 18:38:34,002 | INFO     | job summary report
[2025-05-17 14:38:56] 2025-05-17 18:38:34,002 | INFO     | --------------------------------------------------
[2025-05-17 14:38:56] 2025-05-17 18:38:34,002 | INFO     | PanDA job id: 6653397967
[2025-05-17 14:38:56] 2025-05-17 18:38:34,002 | INFO     | task id: 44638099
[2025-05-17 14:38:56] 2025-05-17 18:38:34,002 | INFO     | errors: (none)
[2025-05-17 14:38:56] 2025-05-17 18:38:34,002 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 14:38:56] 2025-05-17 18:38:34,002 | INFO     | pilot state: finished 
[2025-05-17 14:38:56] 2025-05-17 18:38:34,002 | INFO     | transexitcode: 0
[2025-05-17 14:38:56] 2025-05-17 18:38:34,002 | INFO     | exeerrorcode: 0
[2025-05-17 14:38:56] 2025-05-17 18:38:34,002 | INFO     | exeerrordiag: 
[2025-05-17 14:38:56] 2025-05-17 18:38:34,003 | INFO     | exitcode: 0
[2025-05-17 14:38:56] 2025-05-17 18:38:34,003 | INFO     | exitmsg: OK
[2025-05-17 14:38:56] 2025-05-17 18:38:34,003 | INFO     | cpuconsumptiontime: 41455 s
[2025-05-17 14:38:56] 2025-05-17 18:38:34,003 | INFO     | nevents: 400
[2025-05-17 14:38:56] 2025-05-17 18:38:34,003 | INFO     | neventsw: 0
[2025-05-17 14:38:56] 2025-05-17 18:38:34,003 | INFO     | pid: 3772127
[2025-05-17 14:38:56] 2025-05-17 18:38:34,003 | INFO     | pgrp: 3772127
[2025-05-17 14:38:56] 2025-05-17 18:38:34,003 | INFO     | corecount: 8
[2025-05-17 14:38:56] 2025-05-17 18:38:34,003 | INFO     | event service: False
[2025-05-17 14:38:56] 2025-05-17 18:38:34,003 | INFO     | sizes: {0: 2393713, 6: 2393919, 11: 2393947, 11809: 2423120, 11812: 2432061, 11814: 2432117, 11838: 2432415}
[2025-05-17 14:38:56] 2025-05-17 18:38:34,003 | INFO     | --------------------------------------------------
[2025-05-17 14:38:56] 2025-05-17 18:38:34,003 | INFO     | 
[2025-05-17 14:38:56] 2025-05-17 18:38:34,003 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-05-17 14:38:56] 2025-05-17 18:38:34,349 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 14:38:56] 2025-05-17 18:38:34,349 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 14:38:56] 2025-05-17 18:38:34,349 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 14:38:56] 2025-05-17 18:38:34,349 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 14:38:56] 2025-05-17 18:38:34,349 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 14:38:56] 2025-05-17 18:38:34,349 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 14:38:56] 2025-05-17 18:38:34,349 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 14:38:56] 2025-05-17 18:38:34,349 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 14:38:56] 2025-05-17 18:38:34,349 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 14:38:56] 2025-05-17 18:38:34,350 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 14:38:56] 2025-05-17 18:38:34,350 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 14:38:56] 2025-05-17 18:38:34,350 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 14:38:56] 2025-05-17 18:38:34,350 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 14:38:56] 2025-05-17 18:38:34,350 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 14:38:56] 2025-05-17 18:38:34,350 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 14:38:56] 2025-05-17 18:38:34,350 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 14:38:56] 2025-05-17 18:38:34,350 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 14:38:56] 2025-05-17 18:38:34,350 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 14:38:56] 2025-05-17 18:38:34,350 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 14:38:56] 2025-05-17 18:38:34,350 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 14:38:56] 2025-05-17 18:38:34,350 | INFO     | job 6653397967 has completed (purged errors)
[2025-05-17 14:38:56] 2025-05-17 18:38:34,351 | INFO     | overall cleanup function is called
[2025-05-17 14:38:56] 2025-05-17 18:38:35,399 | INFO     | --- collectZombieJob: --- 10, [3772127]
[2025-05-17 14:38:56] 2025-05-17 18:38:35,400 | INFO     | zombie collector waiting for pid 3772127
[2025-05-17 14:38:56] 2025-05-17 18:38:35,400 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 14:38:56] 2025-05-17 18:38:35,400 | INFO     | collected zombie processes
[2025-05-17 14:38:56] 2025-05-17 18:38:35,400 | INFO     | will attempt to kill all subprocesses of pid=3772127
[2025-05-17 14:38:56] 2025-05-17 18:38:36,116 | INFO     | process IDs to be killed: [3772127] (in reverse order)
[2025-05-17 14:38:56] 2025-05-17 18:38:36,303 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 14:38:56] 2025-05-17 18:38:36,304 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 14:38:56] 2025-05-17 18:38:36,374 | INFO     | did not find any defunct processes belonging to 3772127
[2025-05-17 14:38:56] 2025-05-17 18:38:36,398 | INFO     | did not find any defunct processes belonging to 3772127
[2025-05-17 14:38:56] 2025-05-17 18:38:36,399 | INFO     | ready for new job
[2025-05-17 14:38:56] 2025-05-17 18:38:36,399 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 14:38:56] 2025-05-17 18:38:36,414 | INFO     | **************************************
[2025-05-17 14:38:56] 2025-05-17 18:38:36,414 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 14:38:56] 2025-05-17 18:38:36,414 | INFO     | **************************************
[2025-05-17 14:38:56] 2025-05-17 18:38:36,414 | INFO     | 
[2025-05-17 14:38:56] 2025-05-17 18:38:36,452 | INFO     | architecture information:
[2025-05-17 14:38:56] 2025-05-17 18:38:36,452 | INFO     | executing command: cat /etc/os-release
[2025-05-17 14:38:56] 2025-05-17 18:38:36,483 | INFO     | cat /etc/os-release:
[2025-05-17 14:38:56] NAME="CentOS Linux"
[2025-05-17 14:38:56] VERSION="7 (Core)"
[2025-05-17 14:38:56] ID="centos"
[2025-05-17 14:38:56] ID_LIKE="rhel fedora"
[2025-05-17 14:38:56] VERSION_ID="7"
[2025-05-17 14:38:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 14:38:56] ANSI_COLOR="0;31"
[2025-05-17 14:38:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 14:38:56] HOME_URL="https://www.centos.org/"
[2025-05-17 14:38:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 14:38:56] 
[2025-05-17 14:38:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 14:38:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 14:38:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 14:38:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 14:38:56] 
[2025-05-17 14:38:56] 2025-05-17 18:38:36,483 | INFO     | **************************************
[2025-05-17 14:38:56] 2025-05-17 18:38:36,986 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-05-17 14:38:56] 2025-05-17 18:38:37,003 | INFO     | sufficient remaining disk space (73785147392 B)
[2025-05-17 14:38:56] 2025-05-17 18:38:37,003 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 14:38:56] 2025-05-17 18:38:37,003 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 14:38:56] 2025-05-17 18:38:37,003 | INFO     | update_server=False
[2025-05-17 14:38:56] 2025-05-17 18:38:37,003 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 14:38:56] 2025-05-17 18:38:37,004 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 14:38:56] 2025-05-17 18:38:37,005 | INFO     | aborting loop
[2025-05-17 14:38:56] 2025-05-17 18:38:37,005 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-17 14:38:56] 2025-05-17 18:38:37,005 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 14:38:56] 2025-05-17 18:38:37,005 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 14:38:56] 2025-05-17 18:38:37,005 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 14:38:56] 2025-05-17 18:38:37,005 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 14:38:56] 2025-05-17 18:38:38,009 | INFO     | [job] retrieve thread has finished
[2025-05-17 14:38:56] 2025-05-17 18:38:38,009 | INFO     | [job] job monitor thread has finished
[2025-05-17 14:38:56] 2025-05-17 18:38:38,057 | INFO     | all data control threads have been joined
[2025-05-17 14:38:56] 2025-05-17 18:38:38,127 | INFO     | [data] copytool_in thread has finished
[2025-05-17 14:38:56] 2025-05-17 18:38:38,178 | INFO     | all payload control threads have been joined
[2025-05-17 14:38:56] 2025-05-17 18:38:38,292 | INFO     | [payload] validate_post thread has finished
[2025-05-17 14:38:56] 2025-05-17 18:38:38,295 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 14:38:56] 2025-05-17 18:38:38,536 | INFO     | all job control threads have been joined
[2025-05-17 14:38:56] 2025-05-17 18:38:38,550 | INFO     | [payload] failed_post thread has finished
[2025-05-17 14:38:56] 2025-05-17 18:38:38,621 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 14:38:56] 2025-05-17 18:38:38,646 | INFO     | [job] validate thread has finished
[2025-05-17 14:38:56] 2025-05-17 18:38:39,011 | INFO     | [data] copytool_out thread has finished
[2025-05-17 14:38:56] 2025-05-17 18:38:39,032 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 14:38:56] 2025-05-17 18:38:39,063 | INFO     | [data] control thread has finished
[2025-05-17 14:38:56] 2025-05-17 18:38:39,079 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 14:38:56] 2025-05-17 18:38:39,183 | INFO     | [payload] control thread has finished
[2025-05-17 14:38:56] 2025-05-17 18:38:39,414 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 14:38:56] 2025-05-17 18:38:39,541 | INFO     | [job] control thread has finished
[2025-05-17 14:38:56] 2025-05-17 18:38:40,039 | INFO     | [job] queue monitor thread has finished
[2025-05-17 14:38:56] 2025-05-17 18:38:42,303 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 14:38:56] 2025-05-17 18:38:47,270 | INFO     | job.realtimelogging is not enabled
[2025-05-17 14:38:56] 2025-05-17 18:38:48,285 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 14:38:56] 2025-05-17 18:38:49,990 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140205248022336)>', '<ExcThread(monitor, started 140204610402048)>']
[2025-05-17 14:38:56] 2025-05-17 18:38:50,118 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 14:38:56] 2025-05-17 18:38:50,119 | INFO     | [monitor] control thread has ended
[2025-05-17 14:38:56] 2025-05-17 18:38:55,016 | INFO     | all workflow threads have been joined
[2025-05-17 14:38:56] 2025-05-17 18:38:55,016 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 14:38:56] 2025-05-17 18:38:55,016 | INFO     | traces error code: 0
[2025-05-17 14:38:56] 2025-05-17 18:38:55,016 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 14:38:56] 2025-05-17 18:38:55,202 [wrapper] ==== pilot stdout END ====
[2025-05-17 14:38:56] 2025-05-17 18:38:55,247 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 14:38:56] 2025-05-17 18:38:55,314 [wrapper] pilotpid: 3732751
[2025-05-17 14:38:56] 2025-05-17 18:38:55,339 [wrapper] Pilot exit status: 0
[2025-05-17 14:38:56] 2025-05-17 18:38:55,442 [wrapper] pandaids: 6653397967 6653397967
[2025-05-17 14:38:56] 2025-05-17 18:38:55,708 [wrapper] cleanup supervisor_pilot 1441205 3732752
[2025-05-17 14:38:56] 2025-05-17 18:38:55,712 [wrapper] Test setup, not cleaning
[2025-05-17 14:38:56] 2025-05-17 18:38:55,715 [wrapper] apfmon messages muted
[2025-05-17 14:38:56] 2025-05-17 18:38:55,732 [wrapper] ==== wrapper stdout END ====
[2025-05-17 14:38:56] 2025-05-17 18:38:55,752 [wrapper] ==== wrapper stderr END ====
[2025-05-17 14:38:56]  *** Error codes and diagnostics ***
[2025-05-17 14:38:56]     "exeErrorCode": 0,
[2025-05-17 14:38:56]     "exeErrorDiag": "",
[2025-05-17 14:38:56]     "pilotErrorCode": 0,
[2025-05-17 14:38:56]     "pilotErrorDiag": "",
[2025-05-17 14:38:56]  *** Listing of results directory ***
[2025-05-17 14:38:56] total 637216
[2025-05-17 14:38:56] drwx------. 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-05-17 14:38:56] -rw-r--r--. 1 boincer umatlas    495897 May 17 05:11 pilot3.tar.gz
[2025-05-17 14:38:56] -rw-r--r--. 1 boincer umatlas      5111 May 17 05:32 queuedata.json
[2025-05-17 14:38:56] -rwx------. 1 boincer umatlas     37140 May 17 05:34 runpilot2-wrapper.sh
[2025-05-17 14:38:56] -rw-r--r--. 1 boincer umatlas       100 May 17 08:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 14:38:56] -rwxr-xr-x. 1 boincer umatlas      7986 May 17 08:04 run_atlas
[2025-05-17 14:38:56] -rw-r--r--. 1 boincer umatlas       105 May 17 08:04 job.xml
[2025-05-17 14:38:56] -rw-r--r--. 3 boincer umatlas 225077112 May 17 08:04 EVNT.44638096._002145.pool.root.1
[2025-05-17 14:38:56] -rw-r--r--. 3 boincer umatlas 225077112 May 17 08:04 ATLAS.root_0
[2025-05-17 14:38:56] -rw-r--r--. 2 boincer umatlas    508882 May 17 08:04 input.tar.gz
[2025-05-17 14:38:56] -rw-r--r--. 2 boincer umatlas     17569 May 17 08:04 start_atlas.sh
[2025-05-17 14:38:56] drwxrwx--x. 2 boincer umatlas      4096 May 17 08:04 shared
[2025-05-17 14:38:56] -rw-r--r--. 1 boincer umatlas         0 May 17 08:04 boinc_lockfile
[2025-05-17 14:38:56] -rw-r--r--. 1 boincer umatlas      2540 May 17 11:20 pandaJob.out
[2025-05-17 14:38:56] -rw-------. 1 boincer umatlas       467 May 17 11:20 setup.sh.local
[2025-05-17 14:38:56] -rw-------. 1 boincer umatlas    994619 May 17 11:20 agis_schedconf.cvmfs.json
[2025-05-17 14:38:56] -rw-------. 1 boincer umatlas 195799740 May 17 14:35 HITS.44638099._053594.pool.root.1
[2025-05-17 14:38:56] -rw-r--r--. 1 boincer umatlas       531 May 17 14:35 boinc_task_state.xml
[2025-05-17 14:38:56] -rw-------. 1 boincer umatlas      1033 May 17 14:38 memory_monitor_summary.json
[2025-05-17 14:38:56] -rw-------. 1 boincer umatlas   1596741 May 17 14:38 agis_ddmendpoints.agis.ALL.json
[2025-05-17 14:38:56] -rw-------. 1 boincer umatlas    373834 May 17 14:38 log.44638099._053594.job.log.tgz.1
[2025-05-17 14:38:56] -rw-------. 1 boincer umatlas        96 May 17 14:38 pilot_heartbeat.json
[2025-05-17 14:38:56] -rw-------. 1 boincer umatlas      7696 May 17 14:38 heartbeat.json
[2025-05-17 14:38:56] -rw-r--r--. 1 boincer umatlas      6933 May 17 14:38 init_data.xml
[2025-05-17 14:38:56] -rw-r--r--. 1 boincer umatlas      8192 May 17 14:38 boinc_mmap_file
[2025-05-17 14:38:56] -rw-r--r--. 1 boincer umatlas        28 May 17 14:38 wrapper_checkpoint.txt
[2025-05-17 14:38:56] -rw-------. 1 boincer umatlas      4548 May 17 14:38 pilotlog.txt
[2025-05-17 14:38:56] -rw-------. 1 boincer umatlas    977129 May 17 14:38 log.44638099._053594.job.log.1
[2025-05-17 14:38:56] -rw-------. 1 boincer umatlas       357 May 17 14:38 output.list
[2025-05-17 14:38:56] -rw-r--r--. 1 boincer umatlas       620 May 17 14:38 runtime_log
[2025-05-17 14:38:56] -rw-------. 1 boincer umatlas   1372160 May 17 14:38 result.tar.gz
[2025-05-17 14:38:56] -rw-r--r--. 1 boincer umatlas     11499 May 17 14:38 runtime_log.err
[2025-05-17 14:38:56] -rw-------. 1 boincer umatlas       779 May 17 14:38 h7mMDmZ7Sa7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPFOKDmws03gn.diag
[2025-05-17 14:38:56] -rw-r--r--. 1 boincer umatlas     23103 May 17 14:38 stderr.txt
[2025-05-17 14:38:56] HITS file was successfully produced:
[2025-05-17 14:38:56] -rw-------. 1 boincer umatlas 195799740 May 17 14:35 shared/HITS.pool.root.1
[2025-05-17 14:38:56]  *** Contents of shared directory: ***
[2025-05-17 14:38:56] total 412884
[2025-05-17 14:38:56] -rw-r--r--. 3 boincer umatlas 225077112 May 17 08:04 ATLAS.root_0
[2025-05-17 14:38:56] -rw-r--r--. 2 boincer umatlas    508882 May 17 08:04 input.tar.gz
[2025-05-17 14:38:56] -rw-r--r--. 2 boincer umatlas     17569 May 17 08:04 start_atlas.sh
[2025-05-17 14:38:56] -rw-------. 1 boincer umatlas 195799740 May 17 14:35 HITS.pool.root.1
[2025-05-17 14:38:56] -rw-------. 1 boincer umatlas   1372160 May 17 14:38 result.tar.gz
14:38:58 (3708678): run_atlas exited; CPU time 41973.976584
14:38:58 (3708678): called boinc_finish(0)

</stderr_txt>
]]>

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