Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:55:24 (2092972): wrapper (7.7.26015): starting
07:55:24 (2092972): wrapper: running run_atlas (--nthreads 8)
[2025-05-17 07:55:25] Arguments: --nthreads 8
[2025-05-17 07:55:25] Threads: 8
[2025-05-17 07:55:25] Checking for CVMFS
[2025-05-17 07:55:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 07:55:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 07:55:25] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 07:55:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 07:55:26] 2.12.6.0 11692 5388 206972 146100 3 513 34466696 40960000 43729 16776704 0 55421170 99.719 46588410 40639 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-17 07:55:26] CVMFS is ok
[2025-05-17 07:55:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-17 07:55:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-17 07:55:26] Further information can be found at the LHC@home message board.
[2025-05-17 07:55:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 07:55:26] Checking for apptainer binary...
[2025-05-17 07:55:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 07:55:26] Running /usr/bin/apptainer --version
[2025-05-17 07:55:26] apptainer version 1.4.0-1.el9
[2025-05-17 07:55:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 07:55:27] c8-7-3.aglt2.org
[2025-05-17 07:55:27] apptainer works
[2025-05-17 07:55:27] Set ATHENA_PROC_NUMBER=8
[2025-05-17 07:55:27] Set ATHENA_CORE_NUMBER=8
[2025-05-17 07:55:27] Starting ATLAS job with PandaID=6653397871
[2025-05-17 07:55:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
08:40:13 (2092972): BOINC client no longer exists - exiting
08:40:13 (2092972): timer handler: client dead, exiting
08:41:08 (3052842): wrapper (7.7.26015): starting
08:41:08 (3052842): wrapper: running run_atlas (--nthreads 8)
[2025-05-17 08:41:08] Arguments: --nthreads 8
[2025-05-17 08:41:08] Threads: 8
[2025-05-17 08:41:08] This job has been restarted, cleaning up previous attempt
[2025-05-17 08:41:08] Checking for CVMFS
[2025-05-17 08:41:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 08:41:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 08:41:08] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 08:41:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 08:41:08] 2.12.6.0 11692 5434 211944 146101 2 581 34547335 40960001 35843 16776704 0 56245554 99.723 46589922 40634 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-17 08:41:08] CVMFS is ok
[2025-05-17 08:41:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-17 08:41:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-17 08:41:08] Further information can be found at the LHC@home message board.
[2025-05-17 08:41:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 08:41:08] Checking for apptainer binary...
[2025-05-17 08:41:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 08:41:08] Running /usr/bin/apptainer --version
[2025-05-17 08:41:08] apptainer version 1.4.0-1.el9
[2025-05-17 08:41:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 08:41:08] c8-7-3.aglt2.org
[2025-05-17 08:41:08] apptainer works
[2025-05-17 08:41:08] Set ATHENA_PROC_NUMBER=8
[2025-05-17 08:41:08] Set ATHENA_CORE_NUMBER=8
[2025-05-17 08:41:08] Starting ATLAS job with PandaID=6653397871
[2025-05-17 08:41:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 11:31:48]  *** The last 200 lines of the pilot log: ***
[2025-05-17 11:31:48] 2025-05-17 15:31:08,859 | INFO     | mean x: 1747490738.5180724
[2025-05-17 11:31:48] 2025-05-17 15:31:08,859 | INFO     | mean y: 2073561.656626506
[2025-05-17 11:31:48] 2025-05-17 15:31:08,859 | INFO     | -- intersect: -96727819233.9552
[2025-05-17 11:31:48] 2025-05-17 15:31:08,859 | INFO     | intersect: -96727819233.9552
[2025-05-17 11:31:48] 2025-05-17 15:31:08,859 | INFO     | chi2: 4.718038414657587
[2025-05-17 11:31:48] 2025-05-17 15:31:08,859 | INFO     | sum of square deviations: 1294016547.9751482
[2025-05-17 11:31:48] 2025-05-17 15:31:08,860 | INFO     | sum of deviations: 76577481566.27328
[2025-05-17 11:31:48] 2025-05-17 15:31:08,860 | INFO     | mean x: 1747490586.0124223
[2025-05-17 11:31:48] 2025-05-17 15:31:08,860 | INFO     | mean y: 2071166.8633540373
[2025-05-17 11:31:48] 2025-05-17 15:31:08,860 | INFO     | -- intersect: -103411156698.72989
[2025-05-17 11:31:48] 2025-05-17 15:31:08,860 | INFO     | intersect: -103411156698.72989
[2025-05-17 11:31:48] 2025-05-17 15:31:08,860 | INFO     | chi2: 4.702777618916417
[2025-05-17 11:31:48] 2025-05-17 15:31:08,860 | INFO     | current chi2=4.702777618916417 (change=0.3234563689384012 %)
[2025-05-17 11:31:48] 2025-05-17 15:31:08,860 | INFO     | right removable region: 160
[2025-05-17 11:31:48] 2025-05-17 15:31:08,860 | INFO     | sum of square deviations: 1294024966.9441035
[2025-05-17 11:31:48] 2025-05-17 15:31:08,861 | INFO     | sum of deviations: 42570101513.36025
[2025-05-17 11:31:48] 2025-05-17 15:31:08,861 | INFO     | mean x: 1747490891.0186336
[2025-05-17 11:31:48] 2025-05-17 15:31:08,861 | INFO     | mean y: 2117526.546583851
[2025-05-17 11:31:48] 2025-05-17 15:31:08,861 | INFO     | -- intersect: -57485849494.687065
[2025-05-17 11:31:48] 2025-05-17 15:31:08,861 | INFO     | intersect: -57485849494.687065
[2025-05-17 11:31:48] 2025-05-17 15:31:08,861 | INFO     | chi2: 2.0836351068191337
[2025-05-17 11:31:48] 2025-05-17 15:31:08,861 | INFO     | current chi2=2.0836351068191337 (change=55.836834639881715 %)
[2025-05-17 11:31:48] 2025-05-17 15:31:08,876 | INFO     | sum of square deviations: 1177166046.942304
[2025-05-17 11:31:48] 2025-05-17 15:31:08,877 | INFO     | sum of deviations: 14854824916.865383
[2025-05-17 11:31:48] 2025-05-17 15:31:08,877 | INFO     | mean x: 1747491043.5192308
[2025-05-17 11:31:48] 2025-05-17 15:31:08,877 | INFO     | mean y: 2153702.878205128
[2025-05-17 11:31:48] 2025-05-17 15:31:08,877 | INFO     | -- intersect: -22049683047.5075
[2025-05-17 11:31:48] 2025-05-17 15:31:08,877 | INFO     | intersect: -22049683047.5075
[2025-05-17 11:31:48] 2025-05-17 15:31:08,877 | INFO     | chi2: 0.6382203518316458
[2025-05-17 11:31:48] 2025-05-17 15:31:08,877 | INFO     | current chi2=0.6382203518316458 (change=69.3698599268684 %)
[2025-05-17 11:31:48] 2025-05-17 15:31:08,877 | INFO     | sum of square deviations: 1067563076.9403945
[2025-05-17 11:31:48] 2025-05-17 15:31:08,878 | INFO     | sum of deviations: -239849937.41721874
[2025-05-17 11:31:48] 2025-05-17 15:31:08,878 | INFO     | mean x: 1747491196.0198677
[2025-05-17 11:31:48] 2025-05-17 15:31:08,878 | INFO     | mean y: 2174476.1390728476
[2025-05-17 11:31:48] 2025-05-17 15:31:08,878 | INFO     | -- intersect: 394784208.58105356
[2025-05-17 11:31:48] 2025-05-17 15:31:08,878 | INFO     | intersect: 394784208.58105356
[2025-05-17 11:31:48] 2025-05-17 15:31:08,878 | INFO     | chi2: 0.038197076318632145
[2025-05-17 11:31:48] 2025-05-17 15:31:08,878 | INFO     | current chi2=0.038197076318632145 (change=94.01506451353215 %)
[2025-05-17 11:31:48] 2025-05-17 15:31:08,878 | INFO     | sum of square deviations: 964983494.4383593
[2025-05-17 11:31:48] 2025-05-17 15:31:08,879 | INFO     | sum of deviations: -1250868972.191781
[2025-05-17 11:31:48] 2025-05-17 15:31:08,879 | INFO     | mean x: 1747491348.5205479
[2025-05-17 11:31:48] 2025-05-17 15:31:08,879 | INFO     | mean y: 2175940.897260274
[2025-05-17 11:31:48] 2025-05-17 15:31:08,879 | INFO     | -- intersect: 2267378112.3708324
[2025-05-17 11:31:48] 2025-05-17 15:31:08,879 | INFO     | intersect: 2267378112.3708324
[2025-05-17 11:31:48] 2025-05-17 15:31:08,879 | INFO     | chi2: 0.0315254859258026
[2025-05-17 11:31:48] 2025-05-17 15:31:08,879 | INFO     | current chi2=0.0315254859258026 (change=17.466233114745513 %)
[2025-05-17 11:31:48] 2025-05-17 15:31:08,879 | INFO     | left removable region: 40
[2025-05-17 11:31:48] 2025-05-17 15:31:08,885 | INFO     | sum of square deviations: 535793317.9916659
[2025-05-17 11:31:48] 2025-05-17 15:31:08,886 | INFO     | sum of deviations: 896100316.4000001
[2025-05-17 11:31:48] 2025-05-17 15:31:08,886 | INFO     | mean x: 1747491775.5083334
[2025-05-17 11:31:48] 2025-05-17 15:31:08,886 | INFO     | mean y: 2174771.6
[2025-05-17 11:31:48] 2025-05-17 15:31:08,886 | INFO     | -- intersect: -2920459535.989056
[2025-05-17 11:31:48] 2025-05-17 15:31:08,886 | INFO     | intersect: -2920459535.989056
[2025-05-17 11:31:48] 2025-05-17 15:31:08,886 | INFO     | chi2: 0.021613669121860284
[2025-05-17 11:31:48] 2025-05-17 15:31:08,886 | INFO     | -- intersect: -2920459535.989056
[2025-05-17 11:31:48] 2025-05-17 15:31:08,886 | INFO     | current memory leak: 1.67 B/s (using 120 data points, chi2=0.02)
[2025-05-17 11:31:48] 2025-05-17 15:31:08,887 | INFO     | ..............................
[2025-05-17 11:31:48] 2025-05-17 15:31:08,887 | INFO     | . Timing measurements:
[2025-05-17 11:31:48] 2025-05-17 15:31:08,887 | INFO     | . get job = 0 s
[2025-05-17 11:31:48] 2025-05-17 15:31:08,887 | INFO     | . initial setup = 0 s
[2025-05-17 11:31:48] 2025-05-17 15:31:08,887 | INFO     | . payload setup = 6 s
[2025-05-17 11:31:48] 2025-05-17 15:31:08,887 | INFO     | . stage-in = 0 s
[2025-05-17 11:31:48] 2025-05-17 15:31:08,887 | INFO     | . payload execution = 10123 s
[2025-05-17 11:31:48] 2025-05-17 15:31:08,887 | INFO     | . stage-out = 4 s
[2025-05-17 11:31:48] 2025-05-17 15:31:08,887 | INFO     | . log creation = 1 s
[2025-05-17 11:31:48] 2025-05-17 15:31:08,887 | INFO     | ..............................
[2025-05-17 11:31:48] 2025-05-17 15:31:09,170 | INFO     | 
[2025-05-17 11:31:48] 2025-05-17 15:31:09,171 | INFO     | job summary report
[2025-05-17 11:31:48] 2025-05-17 15:31:09,171 | INFO     | --------------------------------------------------
[2025-05-17 11:31:48] 2025-05-17 15:31:09,171 | INFO     | PanDA job id: 6653397871
[2025-05-17 11:31:48] 2025-05-17 15:31:09,171 | INFO     | task id: 44638099
[2025-05-17 11:31:48] 2025-05-17 15:31:09,171 | INFO     | errors: (none)
[2025-05-17 11:31:48] 2025-05-17 15:31:09,171 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 11:31:48] 2025-05-17 15:31:09,171 | INFO     | pilot state: finished 
[2025-05-17 11:31:48] 2025-05-17 15:31:09,171 | INFO     | transexitcode: 0
[2025-05-17 11:31:48] 2025-05-17 15:31:09,171 | INFO     | exeerrorcode: 0
[2025-05-17 11:31:48] 2025-05-17 15:31:09,171 | INFO     | exeerrordiag: 
[2025-05-17 11:31:48] 2025-05-17 15:31:09,171 | INFO     | exitcode: 0
[2025-05-17 11:31:48] 2025-05-17 15:31:09,171 | INFO     | exitmsg: OK
[2025-05-17 11:31:48] 2025-05-17 15:31:09,171 | INFO     | cpuconsumptiontime: 28431 s
[2025-05-17 11:31:48] 2025-05-17 15:31:09,171 | INFO     | nevents: 400
[2025-05-17 11:31:48] 2025-05-17 15:31:09,171 | INFO     | neventsw: 0
[2025-05-17 11:31:48] 2025-05-17 15:31:09,171 | INFO     | pid: 3141562
[2025-05-17 11:31:48] 2025-05-17 15:31:09,171 | INFO     | pgrp: 3141562
[2025-05-17 11:31:48] 2025-05-17 15:31:09,171 | INFO     | corecount: 8
[2025-05-17 11:31:48] 2025-05-17 15:31:09,171 | INFO     | event service: False
[2025-05-17 11:31:48] 2025-05-17 15:31:09,171 | INFO     | sizes: {0: 2393541, 1: 2393740, 5: 2393946, 11: 2394002, 10134: 2422404, 10135: 2422403, 10140: 2431584, 10175: 2431698}
[2025-05-17 11:31:48] 2025-05-17 15:31:09,171 | INFO     | --------------------------------------------------
[2025-05-17 11:31:48] 2025-05-17 15:31:09,171 | INFO     | 
[2025-05-17 11:31:48] 2025-05-17 15:31:09,171 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-17 11:31:48] 2025-05-17 15:31:09,337 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 11:31:48] 2025-05-17 15:31:09,338 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 11:31:48] 2025-05-17 15:31:09,338 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 11:31:48] 2025-05-17 15:31:09,338 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 11:31:48] 2025-05-17 15:31:09,338 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 11:31:48] 2025-05-17 15:31:09,338 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 11:31:48] 2025-05-17 15:31:09,338 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 11:31:48] 2025-05-17 15:31:09,338 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 11:31:48] 2025-05-17 15:31:09,338 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 11:31:48] 2025-05-17 15:31:09,338 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 11:31:48] 2025-05-17 15:31:09,338 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 11:31:48] 2025-05-17 15:31:09,338 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 11:31:48] 2025-05-17 15:31:09,338 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 11:31:48] 2025-05-17 15:31:09,338 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 11:31:48] 2025-05-17 15:31:09,338 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 11:31:48] 2025-05-17 15:31:09,338 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 11:31:48] 2025-05-17 15:31:09,338 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 11:31:48] 2025-05-17 15:31:09,338 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 11:31:48] 2025-05-17 15:31:09,338 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 11:31:48] 2025-05-17 15:31:09,338 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 11:31:48] 2025-05-17 15:31:09,339 | INFO     | job 6653397871 has completed (purged errors)
[2025-05-17 11:31:48] 2025-05-17 15:31:09,339 | INFO     | overall cleanup function is called
[2025-05-17 11:31:48] 2025-05-17 15:31:10,365 | INFO     | --- collectZombieJob: --- 10, [3141562]
[2025-05-17 11:31:48] 2025-05-17 15:31:10,365 | INFO     | zombie collector waiting for pid 3141562
[2025-05-17 11:31:48] 2025-05-17 15:31:10,365 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 11:31:48] 2025-05-17 15:31:10,366 | INFO     | collected zombie processes
[2025-05-17 11:31:48] 2025-05-17 15:31:10,366 | INFO     | will attempt to kill all subprocesses of pid=3141562
[2025-05-17 11:31:48] 2025-05-17 15:31:12,573 | INFO     | process IDs to be killed: [3141562] (in reverse order)
[2025-05-17 11:31:48] 2025-05-17 15:31:12,948 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 11:31:48] 2025-05-17 15:31:12,948 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 11:31:48] 2025-05-17 15:31:13,012 | INFO     | did not find any defunct processes belonging to 3141562
[2025-05-17 11:31:48] 2025-05-17 15:31:13,090 | INFO     | did not find any defunct processes belonging to 3141562
[2025-05-17 11:31:48] 2025-05-17 15:31:13,091 | INFO     | ready for new job
[2025-05-17 11:31:48] 2025-05-17 15:31:13,091 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 11:31:48] 2025-05-17 15:31:13,092 | INFO     | **************************************
[2025-05-17 11:31:48] 2025-05-17 15:31:13,092 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 11:31:48] 2025-05-17 15:31:13,092 | INFO     | **************************************
[2025-05-17 11:31:48] 2025-05-17 15:31:13,092 | INFO     | 
[2025-05-17 11:31:48] 2025-05-17 15:31:13,101 | INFO     | architecture information:
[2025-05-17 11:31:48] 2025-05-17 15:31:13,101 | INFO     | executing command: cat /etc/os-release
[2025-05-17 11:31:48] 2025-05-17 15:31:13,162 | INFO     | cat /etc/os-release:
[2025-05-17 11:31:48] NAME="CentOS Linux"
[2025-05-17 11:31:48] VERSION="7 (Core)"
[2025-05-17 11:31:48] ID="centos"
[2025-05-17 11:31:48] ID_LIKE="rhel fedora"
[2025-05-17 11:31:48] VERSION_ID="7"
[2025-05-17 11:31:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 11:31:48] ANSI_COLOR="0;31"
[2025-05-17 11:31:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 11:31:48] HOME_URL="https://www.centos.org/"
[2025-05-17 11:31:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 11:31:48] 
[2025-05-17 11:31:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 11:31:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 11:31:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 11:31:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 11:31:48] 
[2025-05-17 11:31:48] 2025-05-17 15:31:13,163 | INFO     | **************************************
[2025-05-17 11:31:48] 2025-05-17 15:31:13,666 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-17 11:31:48] 2025-05-17 15:31:13,788 | INFO     | sufficient remaining disk space (168846950400 B)
[2025-05-17 11:31:48] 2025-05-17 15:31:13,789 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 11:31:48] 2025-05-17 15:31:13,789 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 11:31:48] 2025-05-17 15:31:13,789 | INFO     | update_server=False
[2025-05-17 11:31:48] 2025-05-17 15:31:13,789 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 11:31:48] 2025-05-17 15:31:13,789 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 11:31:48] 2025-05-17 15:31:13,789 | INFO     | aborting loop
[2025-05-17 11:31:48] 2025-05-17 15:31:14,111 | INFO     | all data control threads have been joined
[2025-05-17 11:31:48] 2025-05-17 15:31:14,120 | INFO     | all job control threads have been joined
[2025-05-17 11:31:48] 2025-05-17 15:31:14,154 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 11:31:48] 2025-05-17 15:31:14,185 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 11:31:48] 2025-05-17 15:31:14,859 | INFO     | [job] job monitor thread has finished
[2025-05-17 11:31:48] 2025-05-17 15:31:14,860 | INFO     | [job] retrieve thread has finished
[2025-05-17 11:31:48] 2025-05-17 15:31:14,931 | INFO     | [payload] validate_post thread has finished
[2025-05-17 11:31:48] 2025-05-17 15:31:15,117 | INFO     | [data] control thread has finished
[2025-05-17 11:31:48] 2025-05-17 15:31:15,126 | INFO     | [job] control thread has finished
[2025-05-17 11:31:48] 2025-05-17 15:31:15,201 | INFO     | [job] queue monitor thread has finished
[2025-05-17 11:31:48] 2025-05-17 15:31:15,202 | INFO     | all payload control threads have been joined
[2025-05-17 11:31:48] 2025-05-17 15:31:15,297 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 11:31:48] 2025-05-17 15:31:15,427 | INFO     | [payload] failed_post thread has finished
[2025-05-17 11:31:48] 2025-05-17 15:31:15,450 | INFO     | [data] copytool_in thread has finished
[2025-05-17 11:31:48] 2025-05-17 15:31:15,641 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 11:31:48] 2025-05-17 15:31:15,690 | INFO     | [job] validate thread has finished
[2025-05-17 11:31:48] 2025-05-17 15:31:15,831 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 11:31:48] 2025-05-17 15:31:15,998 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 11:31:48] 2025-05-17 15:31:16,207 | INFO     | [payload] control thread has finished
[2025-05-17 11:31:48] 2025-05-17 15:31:16,209 | INFO     | [data] copytool_out thread has finished
[2025-05-17 11:31:48] 2025-05-17 15:31:16,272 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 11:31:48] 2025-05-17 15:31:18,551 | INFO     | PID=3084602 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-17 11:31:48] 2025-05-17 15:31:18,551 | INFO     | .. there are 72 such processes running
[2025-05-17 11:31:48] 2025-05-17 15:31:18,552 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 11:31:48] 2025-05-17 15:31:18,552 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 11:31:48] 2025-05-17 15:31:18,552 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 11:31:48] 2025-05-17 15:31:19,850 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 11:31:48] 2025-05-17 15:31:21,503 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140333560375104)>', '<ExcThread(monitor, started 140333065160448)>']
[2025-05-17 11:31:48] 2025-05-17 15:31:21,569 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 11:31:48] 2025-05-17 15:31:21,569 | INFO     | [monitor] control thread has ended
[2025-05-17 11:31:48] 2025-05-17 15:31:26,529 | INFO     | all workflow threads have been joined
[2025-05-17 11:31:48] 2025-05-17 15:31:26,529 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 11:31:48] 2025-05-17 15:31:26,530 | INFO     | traces error code: 0
[2025-05-17 11:31:48] 2025-05-17 15:31:26,530 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 11:31:48] 2025-05-17 15:31:26,840 [wrapper] ==== pilot stdout END ====
[2025-05-17 11:31:48] 2025-05-17 15:31:26,872 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 11:31:48] 2025-05-17 15:31:26,890 [wrapper] pilotpid: 3084602
[2025-05-17 11:31:48] 2025-05-17 15:31:26,916 [wrapper] Pilot exit status: 0
[2025-05-17 11:31:48] 2025-05-17 15:31:27,057 [wrapper] pandaids: 6653397871 6653397871
[2025-05-17 11:31:48] 2025-05-17 15:31:27,982 [wrapper] cleanup supervisor_pilot 1862012 3084603
[2025-05-17 11:31:48] 2025-05-17 15:31:28,006 [wrapper] Test setup, not cleaning
[2025-05-17 11:31:48] 2025-05-17 15:31:28,050 [wrapper] apfmon messages muted
[2025-05-17 11:31:48] 2025-05-17 15:31:28,067 [wrapper] ==== wrapper stdout END ====
[2025-05-17 11:31:48] 2025-05-17 15:31:28,093 [wrapper] ==== wrapper stderr END ====
[2025-05-17 11:31:48]  *** Error codes and diagnostics ***
[2025-05-17 11:31:48]     "exeErrorCode": 0,
[2025-05-17 11:31:48]     "exeErrorDiag": "",
[2025-05-17 11:31:48]     "pilotErrorCode": 0,
[2025-05-17 11:31:48]     "pilotErrorDiag": "",
[2025-05-17 11:31:48]  *** Listing of results directory ***
[2025-05-17 11:31:48] total 638088
[2025-05-17 11:31:48] drwx------. 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-05-17 11:31:48] -rw-r--r--. 1 boincer umatlas    495897 May 17 05:11 pilot3.tar.gz
[2025-05-17 11:31:48] -rwx------. 1 boincer umatlas     37140 May 17 05:25 runpilot2-wrapper.sh
[2025-05-17 11:31:48] -rw-r--r--. 1 boincer umatlas      5111 May 17 05:25 queuedata.json
[2025-05-17 11:31:48] -rw-r--r--. 1 boincer umatlas       100 May 17 07:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 11:31:48] -rwxr-xr-x. 1 boincer umatlas      7986 May 17 07:55 run_atlas
[2025-05-17 11:31:48] -rw-r--r--. 1 boincer umatlas       105 May 17 07:55 job.xml
[2025-05-17 11:31:48] -rw-r--r--. 3 boincer umatlas 222553569 May 17 07:55 EVNT.44638096._002140.pool.root.1
[2025-05-17 11:31:48] -rw-r--r--. 3 boincer umatlas 222553569 May 17 07:55 ATLAS.root_0
[2025-05-17 11:31:48] drwxrwx--x. 2 boincer umatlas      4096 May 17 07:55 shared
[2025-05-17 11:31:48] -rw-r--r--. 2 boincer umatlas    508875 May 17 07:55 input.tar.gz
[2025-05-17 11:31:48] -rw-r--r--. 2 boincer umatlas     17569 May 17 07:55 start_atlas.sh
[2025-05-17 11:31:48] -rw-r--r--. 1 boincer umatlas         0 May 17 07:55 boinc_lockfile
[2025-05-17 11:31:48] -rw-r--r--. 1 boincer umatlas      2539 May 17 08:41 pandaJob.out
[2025-05-17 11:31:48] -rw-------. 1 boincer umatlas       467 May 17 08:41 setup.sh.local
[2025-05-17 11:31:48] -rw-------. 1 boincer umatlas    994651 May 17 08:41 agis_schedconf.cvmfs.json
[2025-05-17 11:31:48] -rw-------. 1 boincer umatlas 202041944 May 17 11:29 HITS.44638099._053498.pool.root.1
[2025-05-17 11:31:48] -rw-r--r--. 1 boincer umatlas       530 May 17 11:29 boinc_task_state.xml
[2025-05-17 11:31:48] -rw-------. 1 boincer umatlas      1035 May 17 11:30 memory_monitor_summary.json
[2025-05-17 11:31:48] -rw-------. 1 boincer umatlas   1596741 May 17 11:30 agis_ddmendpoints.agis.ALL.json
[2025-05-17 11:31:48] -rw-------. 1 boincer umatlas    360232 May 17 11:30 log.44638099._053498.job.log.tgz.1
[2025-05-17 11:31:48] -rw-------. 1 boincer umatlas      7693 May 17 11:31 heartbeat.json
[2025-05-17 11:31:48] -rw-------. 1 boincer umatlas        95 May 17 11:31 pilot_heartbeat.json
[2025-05-17 11:31:48] -rw-------. 1 boincer umatlas      4749 May 17 11:31 pilotlog.txt
[2025-05-17 11:31:48] -rw-------. 1 boincer umatlas    842445 May 17 11:31 log.44638099._053498.job.log.1
[2025-05-17 11:31:48] -rw-------. 1 boincer umatlas       357 May 17 11:31 output.list
[2025-05-17 11:31:48] -rw-r--r--. 1 boincer umatlas       620 May 17 11:31 runtime_log
[2025-05-17 11:31:48] -rw-------. 1 boincer umatlas   1218560 May 17 11:31 result.tar.gz
[2025-05-17 11:31:48] -rw-------. 1 boincer umatlas       778 May 17 11:31 YwmNDmBySa7n9Rq4apOajLDm4fhM0noT9bVof3QYDmXJKKDm15kbjn.diag
[2025-05-17 11:31:48] -rw-r--r--. 1 boincer umatlas     11494 May 17 11:31 runtime_log.err
[2025-05-17 11:31:48] -rw-r--r--. 1 boincer umatlas      7161 May 17 11:31 init_data.xml
[2025-05-17 11:31:48] -rw-r--r--. 1 boincer umatlas        28 May 17 11:31 wrapper_checkpoint.txt
[2025-05-17 11:31:48] -rw-r--r--. 1 boincer umatlas      8192 May 17 11:31 boinc_mmap_file
[2025-05-17 11:31:48] -rw-r--r--. 1 boincer umatlas     23200 May 17 11:31 stderr.txt
[2025-05-17 11:31:48] HITS file was successfully produced:
[2025-05-17 11:31:48] -rw-------. 1 boincer umatlas 202041944 May 17 11:29 shared/HITS.pool.root.1
[2025-05-17 11:31:48]  *** Contents of shared directory: ***
[2025-05-17 11:31:48] total 416368
[2025-05-17 11:31:48] -rw-r--r--. 3 boincer umatlas 222553569 May 17 07:55 ATLAS.root_0
[2025-05-17 11:31:48] -rw-r--r--. 2 boincer umatlas    508875 May 17 07:55 input.tar.gz
[2025-05-17 11:31:48] -rw-r--r--. 2 boincer umatlas     17569 May 17 07:55 start_atlas.sh
[2025-05-17 11:31:48] -rw-------. 1 boincer umatlas 202041944 May 17 11:29 HITS.pool.root.1
[2025-05-17 11:31:48] -rw-------. 1 boincer umatlas   1218560 May 17 11:31 result.tar.gz
11:31:49 (3052842): run_atlas exited; CPU time 28835.857406
11:31:49 (3052842): called boinc_finish(0)

</stderr_txt>
]]>

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