Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:19:24 (9507): wrapper (7.7.26015): starting
06:19:24 (9507): wrapper: running run_atlas (--nthreads 8)
[2025-05-18 06:19:24] Arguments: --nthreads 8
[2025-05-18 06:19:24] Threads: 8
[2025-05-18 06:19:24] Checking for CVMFS
[2025-05-18 06:19:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-18 06:19:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-18 06:19:26] Running cvmfs_config stat atlas.cern.ch
[2025-05-18 06:19:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-18 06:19:27] 2.11.2.0 23762 8420 70220 146124 3 14 20003676 25165824 4635 130560 0 5718874 99.743 7180447 1058 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-18 06:19:27] CVMFS is ok
[2025-05-18 06:19:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-18 06:19:27] Checking for apptainer binary...
[2025-05-18 06:19:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-18 06:19:27] Running /usr/bin/apptainer --version
[2025-05-18 06:19:27] apptainer version 1.3.2-1.el7
[2025-05-18 06:19:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-18 07:21:04] cg-vwn242.simple-grid.lan
[2025-05-18 07:21:04] apptainer works
[2025-05-18 07:21:05] Set ATHENA_PROC_NUMBER=8
[2025-05-18 07:21:05] Set ATHENA_CORE_NUMBER=8
[2025-05-18 07:21:05] Starting ATLAS job with PandaID=6653397821
[2025-05-18 07:21:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-18 12:29:21]  *** The last 200 lines of the pilot log: ***
[2025-05-18 12:29:21] 2025-05-18 10:27:47,209 | INFO     | mean y: 2479980.2906574393
[2025-05-18 12:29:21] 2025-05-18 10:27:47,209 | INFO     | -- intersect: -18947957785.263428
[2025-05-18 12:29:21] 2025-05-18 10:27:47,210 | INFO     | intersect: -18947957785.263428
[2025-05-18 12:29:21] 2025-05-18 10:27:47,210 | INFO     | chi2: 7.980804334256612
[2025-05-18 12:29:21] 2025-05-18 10:27:47,211 | INFO     | sum of square deviations: 7102775035.0
[2025-05-18 12:29:21] 2025-05-18 10:27:47,213 | INFO     | sum of deviations: 99657348769.00002
[2025-05-18 12:29:21] 2025-05-18 10:27:47,214 | INFO     | mean x: 1747554990.5
[2025-05-18 12:29:21] 2025-05-18 10:27:47,214 | INFO     | mean y: 2487260.2887323946
[2025-05-18 12:29:21] 2025-05-18 10:27:47,214 | INFO     | -- intersect: -24517041560.92291
[2025-05-18 12:29:21] 2025-05-18 10:27:47,214 | INFO     | intersect: -24517041560.92291
[2025-05-18 12:29:21] 2025-05-18 10:27:47,214 | INFO     | chi2: 7.2612329971627085
[2025-05-18 12:29:21] 2025-05-18 10:27:47,214 | INFO     | current chi2=7.2612329971627085 (change=9.016275890955407 %)
[2025-05-18 12:29:21] 2025-05-18 10:27:47,214 | INFO     | right removable region: 283
[2025-05-18 12:29:21] 2025-05-18 10:27:47,215 | INFO     | sum of square deviations: 7102775035.0
[2025-05-18 12:29:21] 2025-05-18 10:27:47,221 | INFO     | sum of deviations: -10230542562.499989
[2025-05-18 12:29:21] 2025-05-18 10:27:47,222 | INFO     | mean x: 1747555295.5
[2025-05-18 12:29:21] 2025-05-18 10:27:47,222 | INFO     | mean y: 2516429.3626760566
[2025-05-18 12:29:21] 2025-05-18 10:27:47,222 | INFO     | -- intersect: 2519622594.606018
[2025-05-18 12:29:21] 2025-05-18 10:27:47,222 | INFO     | intersect: 2519622594.606018
[2025-05-18 12:29:21] 2025-05-18 10:27:47,222 | INFO     | chi2: 3.9092543258495303
[2025-05-18 12:29:21] 2025-05-18 10:27:47,222 | INFO     | current chi2=3.9092543258495303 (change=51.01678775572105 %)
[2025-05-18 12:29:21] 2025-05-18 10:27:47,223 | INFO     | sum of square deviations: 6734191380.0
[2025-05-18 12:29:21] 2025-05-18 10:27:47,225 | INFO     | sum of deviations: -68452898382.000084
[2025-05-18 12:29:21] 2025-05-18 10:27:47,226 | INFO     | mean x: 1747555448.0
[2025-05-18 12:29:21] 2025-05-18 10:27:47,226 | INFO     | mean y: 2540505.831541219
[2025-05-18 12:29:21] 2025-05-18 10:27:47,226 | INFO     | -- intersect: 17766400893.603092
[2025-05-18 12:29:21] 2025-05-18 10:27:47,226 | INFO     | intersect: 17766400893.603092
[2025-05-18 12:29:21] 2025-05-18 10:27:47,226 | INFO     | chi2: 2.279377439118568
[2025-05-18 12:29:21] 2025-05-18 10:27:47,226 | INFO     | current chi2=2.279377439118568 (change=41.69278207236541 %)
[2025-05-18 12:29:21] 2025-05-18 10:27:47,227 | INFO     | sum of square deviations: 6378584712.5
[2025-05-18 12:29:21] 2025-05-18 10:27:47,229 | INFO     | sum of deviations: -116359814766.99998
[2025-05-18 12:29:21] 2025-05-18 10:27:47,230 | INFO     | mean x: 1747555600.5
[2025-05-18 12:29:21] 2025-05-18 10:27:47,230 | INFO     | mean y: 2561015.562043796
[2025-05-18 12:29:21] 2025-05-18 10:27:47,230 | INFO     | -- intersect: 31881928482.567898
[2025-05-18 12:29:21] 2025-05-18 10:27:47,230 | INFO     | intersect: 31881928482.567898
[2025-05-18 12:29:21] 2025-05-18 10:27:47,230 | INFO     | chi2: 1.0993515399317555
[2025-05-18 12:29:21] 2025-05-18 10:27:47,231 | INFO     | current chi2=1.0993515399317555 (change=51.7696577554583 %)
[2025-05-18 12:29:21] 2025-05-18 10:27:47,231 | INFO     | sum of square deviations: 6035722470.0
[2025-05-18 12:29:21] 2025-05-18 10:27:47,233 | INFO     | sum of deviations: -119997965177.00002
[2025-05-18 12:29:21] 2025-05-18 10:27:47,234 | INFO     | mean x: 1747555753.0
[2025-05-18 12:29:21] 2025-05-18 10:27:47,234 | INFO     | mean y: 2562597.5130111524
[2025-05-18 12:29:21] 2025-05-18 10:27:47,234 | INFO     | -- intersect: 34746230059.970085
[2025-05-18 12:29:21] 2025-05-18 10:27:47,234 | INFO     | intersect: 34746230059.970085
[2025-05-18 12:29:21] 2025-05-18 10:27:47,234 | INFO     | chi2: 1.0372802627578197
[2025-05-18 12:29:21] 2025-05-18 10:27:47,235 | INFO     | current chi2=1.0372802627578197 (change=5.646171849433075 %)
[2025-05-18 12:29:21] 2025-05-18 10:27:47,235 | INFO     | left removable region: 40
[2025-05-18 12:29:21] 2025-05-18 10:27:47,235 | INFO     | sum of square deviations: 4449281562.0
[2025-05-18 12:29:21] 2025-05-18 10:27:47,237 | INFO     | sum of deviations: -70773931851.0
[2025-05-18 12:29:21] 2025-05-18 10:27:47,237 | INFO     | mean x: 1747556180.0
[2025-05-18 12:29:21] 2025-05-18 10:27:47,237 | INFO     | mean y: 2557768.46090535
[2025-05-18 12:29:21] 2025-05-18 10:27:47,237 | INFO     | -- intersect: 27800623650.7014
[2025-05-18 12:29:21] 2025-05-18 10:27:47,238 | INFO     | intersect: 27800623650.7014
[2025-05-18 12:29:21] 2025-05-18 10:27:47,238 | INFO     | chi2: 0.2355678686798165
[2025-05-18 12:29:21] 2025-05-18 10:27:47,238 | INFO     | -- intersect: 27800623650.7014
[2025-05-18 12:29:21] 2025-05-18 10:27:47,238 | INFO     | current memory leak: -15.91 B/s (using 243 data points, chi2=0.24)
[2025-05-18 12:29:21] 2025-05-18 10:27:47,239 | INFO     | ..............................
[2025-05-18 12:29:21] 2025-05-18 10:27:47,239 | INFO     | . Timing measurements:
[2025-05-18 12:29:21] 2025-05-18 10:27:47,239 | INFO     | . get job = 0 s
[2025-05-18 12:29:21] 2025-05-18 10:27:47,239 | INFO     | . initial setup = 7 s
[2025-05-18 12:29:21] 2025-05-18 10:27:47,240 | INFO     | . payload setup = 149 s
[2025-05-18 12:29:21] 2025-05-18 10:27:47,240 | INFO     | . stage-in = 0 s
[2025-05-18 12:29:21] 2025-05-18 10:27:47,240 | INFO     | . payload execution = 17768 s
[2025-05-18 12:29:21] 2025-05-18 10:27:47,240 | INFO     | . stage-out = 3 s
[2025-05-18 12:29:21] 2025-05-18 10:27:47,240 | INFO     | . log creation = 1 s
[2025-05-18 12:29:21] 2025-05-18 10:27:47,240 | INFO     | ..............................
[2025-05-18 12:29:21] 2025-05-18 10:27:47,367 | INFO     | 
[2025-05-18 12:29:21] 2025-05-18 10:27:47,368 | INFO     | job summary report
[2025-05-18 12:29:21] 2025-05-18 10:27:47,368 | INFO     | --------------------------------------------------
[2025-05-18 12:29:21] 2025-05-18 10:27:47,368 | INFO     | PanDA job id: 6653397821
[2025-05-18 12:29:21] 2025-05-18 10:27:47,368 | INFO     | task id: 44638099
[2025-05-18 12:29:21] 2025-05-18 10:27:47,368 | INFO     | errors: (none)
[2025-05-18 12:29:21] 2025-05-18 10:27:47,368 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-18 12:29:21] 2025-05-18 10:27:47,368 | INFO     | pilot state: finished 
[2025-05-18 12:29:21] 2025-05-18 10:27:47,368 | INFO     | transexitcode: 0
[2025-05-18 12:29:21] 2025-05-18 10:27:47,368 | INFO     | exeerrorcode: 0
[2025-05-18 12:29:21] 2025-05-18 10:27:47,368 | INFO     | exeerrordiag: 
[2025-05-18 12:29:21] 2025-05-18 10:27:47,368 | INFO     | exitcode: 0
[2025-05-18 12:29:21] 2025-05-18 10:27:47,369 | INFO     | exitmsg: OK
[2025-05-18 12:29:21] 2025-05-18 10:27:47,369 | INFO     | cpuconsumptiontime: 65630 s
[2025-05-18 12:29:21] 2025-05-18 10:27:47,369 | INFO     | nevents: 400
[2025-05-18 12:29:21] 2025-05-18 10:27:47,369 | INFO     | neventsw: 0
[2025-05-18 12:29:21] 2025-05-18 10:27:47,369 | INFO     | pid: 26114
[2025-05-18 12:29:21] 2025-05-18 10:27:47,369 | INFO     | pgrp: 26114
[2025-05-18 12:29:21] 2025-05-18 10:27:47,369 | INFO     | corecount: 8
[2025-05-18 12:29:21] 2025-05-18 10:27:47,369 | INFO     | event service: False
[2025-05-18 12:29:21] 2025-05-18 10:27:47,369 | INFO     | sizes: {0: 2392885, 1: 2393570, 2: 2393741, 12: 2393769, 23: 2393797, 34: 2393825, 44: 2393981, 55: 2394009, 66: 2394037, 77: 2394065, 87: 2394121, 94: 2394635, 98
[2025-05-18 12:29:21] 2025-05-18 10:27:47,369 | INFO     | --------------------------------------------------
[2025-05-18 12:29:21] 2025-05-18 10:27:47,369 | INFO     | 
[2025-05-18 12:29:21] 2025-05-18 10:27:47,370 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-05-18 12:29:21] 2025-05-18 10:27:47,768 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-18 12:29:21] 2025-05-18 10:27:47,768 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-18 12:29:21] 2025-05-18 10:27:47,768 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-18 12:29:21] 2025-05-18 10:27:47,768 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-18 12:29:21] 2025-05-18 10:27:47,768 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-18 12:29:21] 2025-05-18 10:27:47,769 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-18 12:29:21] 2025-05-18 10:27:47,769 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-18 12:29:21] 2025-05-18 10:27:47,769 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-18 12:29:21] 2025-05-18 10:27:47,769 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-18 12:29:21] 2025-05-18 10:27:47,769 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-18 12:29:21] 2025-05-18 10:27:47,769 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-18 12:29:21] 2025-05-18 10:27:47,769 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-18 12:29:21] 2025-05-18 10:27:47,769 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-18 12:29:21] 2025-05-18 10:27:47,769 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-18 12:29:21] 2025-05-18 10:27:47,769 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-18 12:29:21] 2025-05-18 10:27:47,769 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-18 12:29:21] 2025-05-18 10:27:47,770 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-18 12:29:21] 2025-05-18 10:27:47,770 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-18 12:29:21] 2025-05-18 10:27:47,770 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-18 12:29:21] 2025-05-18 10:27:47,770 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-18 12:29:21] 2025-05-18 10:27:47,770 | INFO     | job 6653397821 has completed (purged errors)
[2025-05-18 12:29:21] 2025-05-18 10:27:47,770 | INFO     | overall cleanup function is called
[2025-05-18 12:29:21] 2025-05-18 10:27:48,779 | INFO     | --- collectZombieJob: --- 10, [26114]
[2025-05-18 12:29:21] 2025-05-18 10:27:48,779 | INFO     | zombie collector waiting for pid 26114
[2025-05-18 12:29:21] 2025-05-18 10:27:48,780 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-18 12:29:21] 2025-05-18 10:27:48,780 | INFO     | collected zombie processes
[2025-05-18 12:29:21] 2025-05-18 10:27:48,780 | INFO     | will attempt to kill all subprocesses of pid=26114
[2025-05-18 12:29:21] 2025-05-18 10:27:48,875 | INFO     | process IDs to be killed: [26114] (in reverse order)
[2025-05-18 12:29:21] 2025-05-18 10:27:49,340 | WARNING  | found no corresponding commands to process id(s)
[2025-05-18 12:29:21] 2025-05-18 10:27:49,340 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-18 12:29:21] 2025-05-18 10:27:49,343 | INFO     | did not find any defunct processes belonging to 26114
[2025-05-18 12:29:21] 2025-05-18 10:27:49,346 | INFO     | did not find any defunct processes belonging to 26114
[2025-05-18 12:29:21] 2025-05-18 10:27:49,347 | INFO     | ready for new job
[2025-05-18 12:29:21] 2025-05-18 10:27:49,347 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-18 12:29:21] 2025-05-18 10:27:49,352 | INFO     | **************************************
[2025-05-18 12:29:21] 2025-05-18 10:27:49,352 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-18 12:29:21] 2025-05-18 10:27:49,353 | INFO     | **************************************
[2025-05-18 12:29:21] 2025-05-18 10:27:49,353 | INFO     | 
[2025-05-18 12:29:21] 2025-05-18 10:27:49,353 | INFO     | pilot is running in a VM
[2025-05-18 12:29:21] 2025-05-18 10:27:49,353 | INFO     | architecture information:
[2025-05-18 12:29:21] 2025-05-18 10:27:49,360 | INFO     | executing command: cat /etc/os-release
[2025-05-18 12:29:21] 2025-05-18 10:27:49,501 | INFO     | cat /etc/os-release:
[2025-05-18 12:29:21] NAME="CentOS Linux"
[2025-05-18 12:29:21] VERSION="7 (Core)"
[2025-05-18 12:29:21] ID="centos"
[2025-05-18 12:29:21] ID_LIKE="rhel fedora"
[2025-05-18 12:29:21] VERSION_ID="7"
[2025-05-18 12:29:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-18 12:29:21] ANSI_COLOR="0;31"
[2025-05-18 12:29:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-18 12:29:21] HOME_URL="https://www.centos.org/"
[2025-05-18 12:29:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-18 12:29:21] 
[2025-05-18 12:29:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-18 12:29:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-18 12:29:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-18 12:29:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-18 12:29:21] 
[2025-05-18 12:29:21] 2025-05-18 10:27:49,501 | INFO     | **************************************
[2025-05-18 12:29:21] 2025-05-18 10:27:50,003 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-05-18 12:29:21] 2025-05-18 10:27:50,181 | INFO     | sufficient remaining disk space (496116957184 B)
[2025-05-18 12:29:21] 2025-05-18 10:27:50,181 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-18 12:29:21] 2025-05-18 10:27:50,181 | INFO     | current server update state: UPDATING_FINAL
[2025-05-18 12:29:21] 2025-05-18 10:27:50,181 | INFO     | update_server=False
[2025-05-18 12:29:21] 2025-05-18 10:27:50,182 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-18 12:29:21] 2025-05-18 10:27:50,182 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-18 12:29:21] 2025-05-18 10:27:50,182 | INFO     | aborting loop
[2025-05-18 12:29:21] 2025-05-18 10:27:50,183 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-18 12:29:21] 2025-05-18 10:27:50,186 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-18 12:29:21] 2025-05-18 10:27:50,187 | INFO     | found 0 job(s) in 20 queues
[2025-05-18 12:29:21] 2025-05-18 10:27:50,187 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-18 12:29:21] 2025-05-18 10:27:50,187 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-18 12:29:21] 2025-05-18 10:27:50,799 | INFO     | all payload control threads have been joined
[2025-05-18 12:29:21] 2025-05-18 10:27:51,036 | INFO     | all data control threads have been joined
[2025-05-18 12:29:21] 2025-05-18 10:27:51,070 | INFO     | all job control threads have been joined
[2025-05-18 12:29:21] 2025-05-18 10:27:51,187 | INFO     | [job] retrieve thread has finished
[2025-05-18 12:29:21] 2025-05-18 10:27:51,188 | INFO     | [job] job monitor thread has finished
[2025-05-18 12:29:21] 2025-05-18 10:27:51,628 | INFO     | [job] create_data_payload thread has finished
[2025-05-18 12:29:21] 2025-05-18 10:27:51,678 | INFO     | [payload] validate_pre thread has finished
[2025-05-18 12:29:21] 2025-05-18 10:27:51,805 | INFO     | [payload] control thread has finished
[2025-05-18 12:29:21] 2025-05-18 10:27:51,904 | INFO     | [payload] failed_post thread has finished
[2025-05-18 12:29:21] 2025-05-18 10:27:51,969 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-18 12:29:21] 2025-05-18 10:27:52,042 | INFO     | [data] control thread has finished
[2025-05-18 12:29:21] 2025-05-18 10:27:52,076 | INFO     | [job] control thread has finished
[2025-05-18 12:29:21] 2025-05-18 10:27:52,189 | INFO     | [data] copytool_out thread has finished
[2025-05-18 12:29:21] 2025-05-18 10:27:52,266 | INFO     | [data] copytool_in thread has finished
[2025-05-18 12:29:21] 2025-05-18 10:27:52,309 | INFO     | [payload] execute_payloads thread has finished
[2025-05-18 12:29:21] 2025-05-18 10:27:52,310 | INFO     | [job] validate thread has finished
[2025-05-18 12:29:21] 2025-05-18 10:27:52,383 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-18 12:29:21] 2025-05-18 10:27:52,771 | INFO     | [payload] validate_post thread has finished
[2025-05-18 12:29:21] 2025-05-18 10:27:53,389 | INFO     | [job] queue monitor thread has finished
[2025-05-18 12:29:21] 2025-05-18 10:27:55,978 | INFO     | [data] queue_monitor thread has finished
[2025-05-18 12:29:21] 2025-05-18 10:28:00,338 | INFO     | job.realtimelogging is not enabled
[2025-05-18 12:29:21] 2025-05-18 10:28:01,344 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-18 12:29:21] 2025-05-18 10:28:02,509 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140155589965632)>', '<ExcThread(monitor, started 140155142776576)>']
[2025-05-18 12:29:21] 2025-05-18 10:28:03,265 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-18 12:29:21] 2025-05-18 10:28:03,265 | INFO     | [monitor] control thread has ended
[2025-05-18 12:29:21] 2025-05-18 10:28:07,535 | INFO     | all workflow threads have been joined
[2025-05-18 12:29:21] 2025-05-18 10:28:07,535 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-18 12:29:21] 2025-05-18 10:28:07,536 | INFO     | traces error code: 0
[2025-05-18 12:29:21] 2025-05-18 10:28:07,536 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-18 12:29:21] 2025-05-18 10:28:07,825 [wrapper] ==== pilot stdout END ====
[2025-05-18 12:29:21] 2025-05-18 10:28:07,901 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-18 12:29:21] 2025-05-18 10:28:07,963 [wrapper] pilotpid: 18631
[2025-05-18 12:29:21] 2025-05-18 10:28:08,060 [wrapper] Pilot exit status: 0
[2025-05-18 12:29:21] 2025-05-18 10:28:08,592 [wrapper] pandaids: 6653397821
[2025-05-18 12:29:21] 2025-05-18 10:28:09,334 [wrapper] cleanup supervisor_pilot 19498 18632
[2025-05-18 12:29:21] 2025-05-18 10:28:09,401 [wrapper] Test setup, not cleaning
[2025-05-18 12:29:21] 2025-05-18 10:28:09,470 [wrapper] apfmon messages muted
[2025-05-18 12:29:21] 2025-05-18 10:28:09,538 [wrapper] ==== wrapper stdout END ====
[2025-05-18 12:29:21] 2025-05-18 10:28:09,581 [wrapper] ==== wrapper stderr END ====
[2025-05-18 12:29:21]  *** Error codes and diagnostics ***
[2025-05-18 12:29:21]     "exeErrorCode": 0,
[2025-05-18 12:29:21]     "exeErrorDiag": "",
[2025-05-18 12:29:21]     "pilotErrorCode": 0,
[2025-05-18 12:29:21]     "pilotErrorDiag": "",
[2025-05-18 12:29:21]  *** Listing of results directory ***
[2025-05-18 12:29:21] total 413700
[2025-05-18 12:29:21] -rw-r--r--. 1 boinc boinc    495897 May 17 11:11 pilot3.tar.gz
[2025-05-18 12:29:21] -rw-r--r--. 1 boinc boinc      5111 May 17 11:21 queuedata.json
[2025-05-18 12:29:21] -rwx------. 1 boinc boinc     37140 May 17 11:22 runpilot2-wrapper.sh
[2025-05-18 12:29:21] -rw-r--r--. 1 boinc boinc       100 May 18 06:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-18 12:29:21] -rwxr-xr-x. 1 boinc boinc      7986 May 18 06:19 run_atlas
[2025-05-18 12:29:21] -rw-r--r--. 1 boinc boinc       105 May 18 06:19 job.xml
[2025-05-18 12:29:21] -rw-r--r--. 1 boinc boinc      6372 May 18 06:19 init_data.xml
[2025-05-18 12:29:21] -rw-r--r--. 2 boinc boinc 221353304 May 18 06:19 EVNT.44638096._002138.pool.root.1
[2025-05-18 12:29:21] -rw-r--r--. 2 boinc boinc     17569 May 18 06:19 start_atlas.sh
[2025-05-18 12:29:21] drwxrwx--x. 2 boinc boinc        68 May 18 06:19 shared
[2025-05-18 12:29:21] -rw-r--r--. 2 boinc boinc    508884 May 18 06:19 input.tar.gz
[2025-05-18 12:29:21] -rw-r--r--. 1 boinc boinc         0 May 18 06:19 boinc_lockfile
[2025-05-18 12:29:21] -rw-r--r--. 1 boinc boinc      2540 May 18 07:21 pandaJob.out
[2025-05-18 12:29:21] -rw-------. 1 boinc boinc       424 May 18 07:21 setup.sh.local
[2025-05-18 12:29:21] -rw-------. 1 boinc boinc    994627 May 18 07:24 agis_schedconf.cvmfs.json
[2025-05-18 12:29:21] drwx------. 4 boinc boinc      4096 May 18 07:24 pilot3
[2025-05-18 12:29:21] -rw-------. 1 boinc boinc 194488823 May 18 12:24 HITS.44638099._053448.pool.root.1
[2025-05-18 12:29:21] -rw-r--r--. 1 boinc boinc       531 May 18 12:25 boinc_task_state.xml
[2025-05-18 12:29:21] -rw-------. 1 boinc boinc      1014 May 18 12:26 memory_monitor_summary.json
[2025-05-18 12:29:21] -rw-------. 1 boinc boinc   1596741 May 18 12:26 agis_ddmendpoints.agis.ALL.json
[2025-05-18 12:29:21] -rw-------. 1 boinc boinc    429600 May 18 12:26 log.44638099._053448.job.log.tgz.1
[2025-05-18 12:29:21] -rw-------. 1 boinc boinc        95 May 18 12:27 pilot_heartbeat.json
[2025-05-18 12:29:21] -rw-------. 1 boinc boinc      7694 May 18 12:27 heartbeat.json
[2025-05-18 12:29:21] -rw-------. 1 boinc boinc      4611 May 18 12:28 pilotlog.txt
[2025-05-18 12:29:21] -rw-------. 1 boinc boinc   1548573 May 18 12:28 log.44638099._053448.job.log.1
[2025-05-18 12:29:21] -rw-------. 1 boinc boinc       357 May 18 12:28 output.list
[2025-05-18 12:29:21] -rw-r--r--. 1 boinc boinc       620 May 18 12:28 runtime_log
[2025-05-18 12:29:21] -rw-------. 1 boinc boinc   1996800 May 18 12:28 result.tar.gz
[2025-05-18 12:29:21] -rw-------. 1 boinc boinc       657 May 18 12:28 VOCMDmfvSa7n9Rq4apOajLDm4fhM0noT9bVof3QYDmMJKKDm1TEX5n.diag
[2025-05-18 12:29:21] -rw-r--r--. 1 boinc boinc     11013 May 18 12:28 runtime_log.err
[2025-05-18 12:29:21] -rw-r--r--. 1 boinc boinc      8192 May 18 12:29 boinc_mmap_file
[2025-05-18 12:29:21] -rw-r--r--. 1 boinc boinc        28 May 18 12:29 wrapper_checkpoint.txt
[2025-05-18 12:29:21] -rw-r--r--. 1 boinc boinc     20482 May 18 12:29 stderr.txt
[2025-05-18 12:29:21] HITS file was successfully produced:
[2025-05-18 12:29:21] -rw-------. 1 boinc boinc 194488823 May 18 12:24 shared/HITS.pool.root.1
[2025-05-18 12:29:21]  *** Contents of shared directory: ***
[2025-05-18 12:29:21] total 408572
[2025-05-18 12:29:21] -rw-r--r--. 2 boinc boinc 221353304 May 18 06:19 ATLAS.root_0
[2025-05-18 12:29:21] -rw-r--r--. 2 boinc boinc     17569 May 18 06:19 start_atlas.sh
[2025-05-18 12:29:21] -rw-r--r--. 2 boinc boinc    508884 May 18 06:19 input.tar.gz
[2025-05-18 12:29:21] -rw-------. 1 boinc boinc 194488823 May 18 12:24 HITS.pool.root.1
[2025-05-18 12:29:21] -rw-------. 1 boinc boinc   1996800 May 18 12:28 result.tar.gz
12:29:23 (9507): run_atlas exited; CPU time 65878.285242
12:29:23 (9507): called boinc_finish(0)

</stderr_txt>
]]>

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