Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:05:39 (15471): wrapper (7.7.26015): starting
09:05:39 (15471): wrapper: running run_atlas (--nthreads 8)
[2025-05-18 09:05:39] Arguments: --nthreads 8
[2025-05-18 09:05:39] Threads: 8
[2025-05-18 09:05:39] Checking for CVMFS
[2025-05-18 09:05:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-18 09:05:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-18 09:05:40] Running cvmfs_config stat atlas.cern.ch
[2025-05-18 09:05:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-18 09:05:41] 2.11.2.0 9407 8394 76088 146127 0 59 15213126 25165825 4642 130560 0 5999020 99.820 7325689 1185 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-18 09:05:41] CVMFS is ok
[2025-05-18 09:05:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-18 09:05:41] Checking for apptainer binary...
[2025-05-18 09:05:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-18 09:05:41] Running /usr/bin/apptainer --version
[2025-05-18 09:05:41] apptainer version 1.3.2-1.el7
[2025-05-18 09:05:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-18 09:05:51] cg-vwn416.simple-grid.lan
[2025-05-18 09:05:51] apptainer works
[2025-05-18 09:05:51] Set ATHENA_PROC_NUMBER=8
[2025-05-18 09:05:51] Set ATHENA_CORE_NUMBER=8
[2025-05-18 09:05:51] Starting ATLAS job with PandaID=6653397634
[2025-05-18 09:05:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-18 14:40:12]  *** The last 200 lines of the pilot log: ***
[2025-05-18 14:40:13] 2025-05-18 12:22:50,622 | INFO     | -- intersect: -46624146062.41909
[2025-05-18 14:40:13] 2025-05-18 12:22:50,622 | INFO     | intersect: -46624146062.41909
[2025-05-18 14:40:13] 2025-05-18 12:22:50,622 | INFO     | chi2: 9.248718654852562
[2025-05-18 14:40:13] 2025-05-18 12:22:50,622 | INFO     | current chi2=9.248718654852562 (change=7.113116668857653 %)
[2025-05-18 14:40:13] 2025-05-18 12:22:50,622 | INFO     | right removable region: 293
[2025-05-18 14:40:13] 2025-05-18 12:22:50,623 | INFO     | sum of square deviations: 7879803557.5
[2025-05-18 14:40:13] 2025-05-18 12:22:50,626 | INFO     | sum of deviations: 92862845865.49997
[2025-05-18 14:40:13] 2025-05-18 12:22:50,626 | INFO     | mean x: 1747561893.5
[2025-05-18 14:40:13] 2025-05-18 12:22:50,626 | INFO     | mean y: 2456455.5204081633
[2025-05-18 14:40:13] 2025-05-18 12:22:50,626 | INFO     | -- intersect: -20592418730.428894
[2025-05-18 14:40:13] 2025-05-18 12:22:50,626 | INFO     | intersect: -20592418730.428894
[2025-05-18 14:40:13] 2025-05-18 12:22:50,627 | INFO     | chi2: 5.132049571159404
[2025-05-18 14:40:13] 2025-05-18 12:22:50,627 | INFO     | current chi2=5.132049571159404 (change=48.45771532732152 %)
[2025-05-18 14:40:13] 2025-05-18 12:22:50,628 | INFO     | sum of square deviations: 7484568240.0
[2025-05-18 14:40:13] 2025-05-18 12:22:50,630 | INFO     | sum of deviations: 21409134131.999996
[2025-05-18 14:40:13] 2025-05-18 12:22:50,631 | INFO     | mean x: 1747562046.0
[2025-05-18 14:40:13] 2025-05-18 12:22:50,631 | INFO     | mean y: 2483992.408304498
[2025-05-18 14:40:13] 2025-05-18 12:22:50,631 | INFO     | -- intersect: -4996306725.652721
[2025-05-18 14:40:13] 2025-05-18 12:22:50,631 | INFO     | intersect: -4996306725.652721
[2025-05-18 14:40:13] 2025-05-18 12:22:50,631 | INFO     | chi2: 2.815916713936157
[2025-05-18 14:40:13] 2025-05-18 12:22:50,632 | INFO     | current chi2=2.815916713936157 (change=45.13075770427524 %)
[2025-05-18 14:40:13] 2025-05-18 12:22:50,632 | INFO     | sum of square deviations: 7102775035.0
[2025-05-18 14:40:13] 2025-05-18 12:22:50,635 | INFO     | sum of deviations: -36781263787.5
[2025-05-18 14:40:13] 2025-05-18 12:22:50,635 | INFO     | mean x: 1747562198.5
[2025-05-18 14:40:13] 2025-05-18 12:22:50,635 | INFO     | mean y: 2507236.4471830986
[2025-05-18 14:40:13] 2025-05-18 12:22:50,635 | INFO     | -- intersect: 9052145707.517235
[2025-05-18 14:40:13] 2025-05-18 12:22:50,635 | INFO     | intersect: 9052145707.517235
[2025-05-18 14:40:13] 2025-05-18 12:22:50,636 | INFO     | chi2: 1.3201673579616546
[2025-05-18 14:40:13] 2025-05-18 12:22:50,636 | INFO     | current chi2=1.3201673579616546 (change=53.11767029798645 %)
[2025-05-18 14:40:13] 2025-05-18 12:22:50,636 | INFO     | sum of square deviations: 6734191380.0
[2025-05-18 14:40:13] 2025-05-18 12:22:50,639 | INFO     | sum of deviations: -60978814517.0
[2025-05-18 14:40:13] 2025-05-18 12:22:50,639 | INFO     | mean x: 1747562351.0
[2025-05-18 14:40:13] 2025-05-18 12:22:50,639 | INFO     | mean y: 2517180.9605734767
[2025-05-18 14:40:13] 2025-05-18 12:22:50,640 | INFO     | -- intersect: 15826878926.159662
[2025-05-18 14:40:13] 2025-05-18 12:22:50,640 | INFO     | intersect: 15826878926.159662
[2025-05-18 14:40:13] 2025-05-18 12:22:50,640 | INFO     | chi2: 0.9023292111544057
[2025-05-18 14:40:13] 2025-05-18 12:22:50,640 | INFO     | current chi2=0.9023292111544057 (change=31.65039222393691 %)
[2025-05-18 14:40:13] 2025-05-18 12:22:50,641 | INFO     | sum of square deviations: 6378584712.5
[2025-05-18 14:40:13] 2025-05-18 12:22:50,643 | INFO     | sum of deviations: -58026727782.499985
[2025-05-18 14:40:13] 2025-05-18 12:22:50,643 | INFO     | mean x: 1747562503.5
[2025-05-18 14:40:13] 2025-05-18 12:22:50,644 | INFO     | mean y: 2515908.2372262776
[2025-05-18 14:40:13] 2025-05-18 12:22:50,644 | INFO     | -- intersect: 15900295469.70898
[2025-05-18 14:40:13] 2025-05-18 12:22:50,644 | INFO     | intersect: 15900295469.70898
[2025-05-18 14:40:13] 2025-05-18 12:22:50,644 | INFO     | chi2: 0.9010270473991547
[2025-05-18 14:40:13] 2025-05-18 12:22:50,644 | INFO     | current chi2=0.9010270473991547 (change=0.14431138204924135 %)
[2025-05-18 14:40:13] 2025-05-18 12:22:50,644 | INFO     | left removable region: 50
[2025-05-18 14:40:13] 2025-05-18 12:22:50,645 | INFO     | sum of square deviations: 4449281562.0
[2025-05-18 14:40:13] 2025-05-18 12:22:50,647 | INFO     | sum of deviations: -10216817776.0
[2025-05-18 14:40:13] 2025-05-18 12:22:50,647 | INFO     | mean x: 1747563083.0
[2025-05-18 14:40:13] 2025-05-18 12:22:50,647 | INFO     | mean y: 2510072.7407407407
[2025-05-18 14:40:13] 2025-05-18 12:22:50,647 | INFO     | -- intersect: 4015412677.863793
[2025-05-18 14:40:13] 2025-05-18 12:22:50,647 | INFO     | intersect: 4015412677.863793
[2025-05-18 14:40:13] 2025-05-18 12:22:50,648 | INFO     | chi2: 0.06519323446484981
[2025-05-18 14:40:13] 2025-05-18 12:22:50,648 | INFO     | -- intersect: 4015412677.863793
[2025-05-18 14:40:13] 2025-05-18 12:22:50,648 | INFO     | current memory leak: -2.30 B/s (using 243 data points, chi2=0.07)
[2025-05-18 14:40:13] 2025-05-18 12:22:50,649 | INFO     | ..............................
[2025-05-18 14:40:13] 2025-05-18 12:22:50,649 | INFO     | . Timing measurements:
[2025-05-18 14:40:13] 2025-05-18 12:22:50,650 | INFO     | . get job = 0 s
[2025-05-18 14:40:13] 2025-05-18 12:22:50,650 | INFO     | . initial setup = 10 s
[2025-05-18 14:40:13] 2025-05-18 12:22:50,650 | INFO     | . payload setup = 133 s
[2025-05-18 14:40:13] 2025-05-18 12:22:50,650 | INFO     | . stage-in = 0 s
[2025-05-18 14:40:13] 2025-05-18 12:22:50,650 | INFO     | . payload execution = 18381 s
[2025-05-18 14:40:13] 2025-05-18 12:22:50,650 | INFO     | . stage-out = 3 s
[2025-05-18 14:40:13] 2025-05-18 12:22:50,650 | INFO     | . log creation = 1 s
[2025-05-18 14:40:13] 2025-05-18 12:22:50,650 | INFO     | ..............................
[2025-05-18 14:40:13] 2025-05-18 12:22:50,852 | INFO     | 
[2025-05-18 14:40:13] 2025-05-18 12:22:50,853 | INFO     | job summary report
[2025-05-18 14:40:13] 2025-05-18 12:22:50,853 | INFO     | --------------------------------------------------
[2025-05-18 14:40:13] 2025-05-18 12:22:50,853 | INFO     | PanDA job id: 6653397634
[2025-05-18 14:40:13] 2025-05-18 12:22:50,853 | INFO     | task id: 44638099
[2025-05-18 14:40:13] 2025-05-18 12:22:50,853 | INFO     | errors: (none)
[2025-05-18 14:40:13] 2025-05-18 12:22:50,853 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-18 14:40:13] 2025-05-18 12:22:50,853 | INFO     | pilot state: finished 
[2025-05-18 14:40:13] 2025-05-18 12:22:50,853 | INFO     | transexitcode: 0
[2025-05-18 14:40:13] 2025-05-18 12:22:50,853 | INFO     | exeerrorcode: 0
[2025-05-18 14:40:13] 2025-05-18 12:22:50,853 | INFO     | exeerrordiag: 
[2025-05-18 14:40:13] 2025-05-18 12:22:50,853 | INFO     | exitcode: 0
[2025-05-18 14:40:13] 2025-05-18 12:22:50,853 | INFO     | exitmsg: OK
[2025-05-18 14:40:13] 2025-05-18 12:22:50,854 | INFO     | cpuconsumptiontime: 66597 s
[2025-05-18 14:40:13] 2025-05-18 12:22:50,854 | INFO     | nevents: 400
[2025-05-18 14:40:13] 2025-05-18 12:22:50,854 | INFO     | neventsw: 0
[2025-05-18 14:40:13] 2025-05-18 12:22:50,854 | INFO     | pid: 26209
[2025-05-18 14:40:13] 2025-05-18 12:22:50,854 | INFO     | pgrp: 26209
[2025-05-18 14:40:13] 2025-05-18 12:22:50,854 | INFO     | corecount: 8
[2025-05-18 14:40:13] 2025-05-18 12:22:50,854 | INFO     | event service: False
[2025-05-18 14:40:13] 2025-05-18 12:22:50,854 | INFO     | sizes: {0: 2393541, 1: 2393740, 12: 2393740, 23: 2393768, 33: 2393796, 44: 2393852, 55: 2394008, 66: 2394036, 76: 2394064, 87: 2394120, 93: 2394354, 98: 2394662, 1
[2025-05-18 14:40:13] 2025-05-18 12:22:50,854 | INFO     | --------------------------------------------------
[2025-05-18 14:40:13] 2025-05-18 12:22:50,854 | INFO     | 
[2025-05-18 14:40:13] 2025-05-18 12:22:50,854 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-05-18 14:40:13] 2025-05-18 12:22:51,477 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-18 14:40:13] 2025-05-18 12:22:51,477 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-18 14:40:13] 2025-05-18 12:22:51,478 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-18 14:40:13] 2025-05-18 12:22:51,478 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-18 14:40:13] 2025-05-18 12:22:51,478 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-18 14:40:13] 2025-05-18 12:22:51,478 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-18 14:40:13] 2025-05-18 12:22:51,478 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-18 14:40:13] 2025-05-18 12:22:51,478 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-18 14:40:13] 2025-05-18 12:22:51,478 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-18 14:40:13] 2025-05-18 12:22:51,478 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-18 14:40:13] 2025-05-18 12:22:51,478 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-18 14:40:13] 2025-05-18 12:22:51,478 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-18 14:40:13] 2025-05-18 12:22:51,479 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-18 14:40:13] 2025-05-18 12:22:51,479 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-18 14:40:13] 2025-05-18 12:22:51,479 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-18 14:40:13] 2025-05-18 12:22:51,479 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-18 14:40:13] 2025-05-18 12:22:51,479 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-18 14:40:13] 2025-05-18 12:22:51,479 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-18 14:40:13] 2025-05-18 12:22:51,479 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-18 14:40:13] 2025-05-18 12:22:51,479 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-18 14:40:13] 2025-05-18 12:22:51,479 | INFO     | job 6653397634 has completed (purged errors)
[2025-05-18 14:40:13] 2025-05-18 12:22:51,480 | INFO     | overall cleanup function is called
[2025-05-18 14:40:13] 2025-05-18 12:22:52,489 | INFO     | --- collectZombieJob: --- 10, [26209]
[2025-05-18 14:40:13] 2025-05-18 12:22:52,489 | INFO     | zombie collector waiting for pid 26209
[2025-05-18 14:40:13] 2025-05-18 12:22:52,490 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-18 14:40:13] 2025-05-18 12:22:52,490 | INFO     | collected zombie processes
[2025-05-18 14:40:13] 2025-05-18 12:22:52,490 | INFO     | will attempt to kill all subprocesses of pid=26209
[2025-05-18 14:40:13] 2025-05-18 12:22:52,611 | INFO     | process IDs to be killed: [26209] (in reverse order)
[2025-05-18 14:40:13] 2025-05-18 12:22:53,433 | WARNING  | found no corresponding commands to process id(s)
[2025-05-18 14:40:13] 2025-05-18 12:22:53,433 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-18 14:40:13] 2025-05-18 12:22:53,436 | INFO     | did not find any defunct processes belonging to 26209
[2025-05-18 14:40:13] 2025-05-18 12:22:53,439 | INFO     | did not find any defunct processes belonging to 26209
[2025-05-18 14:40:13] 2025-05-18 12:22:53,439 | INFO     | ready for new job
[2025-05-18 14:40:13] 2025-05-18 12:22:53,440 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-18 14:40:13] 2025-05-18 12:22:53,442 | INFO     | **************************************
[2025-05-18 14:40:13] 2025-05-18 12:22:53,442 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-18 14:40:13] 2025-05-18 12:22:53,442 | INFO     | **************************************
[2025-05-18 14:40:13] 2025-05-18 12:22:53,442 | INFO     | 
[2025-05-18 14:40:13] 2025-05-18 12:22:53,443 | INFO     | pilot is running in a VM
[2025-05-18 14:40:13] 2025-05-18 12:22:53,443 | INFO     | architecture information:
[2025-05-18 14:40:13] 2025-05-18 12:22:53,452 | INFO     | executing command: cat /etc/os-release
[2025-05-18 14:40:13] 2025-05-18 12:22:53,649 | INFO     | cat /etc/os-release:
[2025-05-18 14:40:13] NAME="CentOS Linux"
[2025-05-18 14:40:13] VERSION="7 (Core)"
[2025-05-18 14:40:13] ID="centos"
[2025-05-18 14:40:13] ID_LIKE="rhel fedora"
[2025-05-18 14:40:13] VERSION_ID="7"
[2025-05-18 14:40:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-18 14:40:13] ANSI_COLOR="0;31"
[2025-05-18 14:40:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-18 14:40:13] HOME_URL="https://www.centos.org/"
[2025-05-18 14:40:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-18 14:40:13] 
[2025-05-18 14:40:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-18 14:40:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-18 14:40:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-18 14:40:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-18 14:40:13] 
[2025-05-18 14:40:13] 2025-05-18 12:22:53,649 | INFO     | **************************************
[2025-05-18 14:40:13] 2025-05-18 12:22:54,154 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-05-18 14:40:13] 2025-05-18 12:22:54,314 | INFO     | sufficient remaining disk space (496522756096 B)
[2025-05-18 14:40:13] 2025-05-18 12:22:54,314 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-18 14:40:13] 2025-05-18 12:22:54,314 | INFO     | current server update state: UPDATING_FINAL
[2025-05-18 14:40:13] 2025-05-18 12:22:54,314 | INFO     | update_server=False
[2025-05-18 14:40:13] 2025-05-18 12:22:54,315 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-18 14:40:13] 2025-05-18 12:22:54,315 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-18 14:40:13] 2025-05-18 12:22:54,315 | INFO     | found 0 job(s) in 20 queues
[2025-05-18 14:40:13] 2025-05-18 12:22:54,315 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-18 14:40:13] 2025-05-18 12:22:54,315 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-18 14:40:13] 2025-05-18 12:22:54,316 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-18 14:40:13] 2025-05-18 12:22:54,690 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-18 14:40:13] 2025-05-18 12:22:54,690 | INFO     | aborting loop
[2025-05-18 14:40:13] 2025-05-18 12:22:54,932 | INFO     | all data control threads have been joined
[2025-05-18 14:40:13] 2025-05-18 12:22:55,195 | INFO     | all job control threads have been joined
[2025-05-18 14:40:13] 2025-05-18 12:22:55,320 | INFO     | [job] retrieve thread has finished
[2025-05-18 14:40:13] 2025-05-18 12:22:55,499 | INFO     | [payload] execute_payloads thread has finished
[2025-05-18 14:40:13] 2025-05-18 12:22:55,603 | INFO     | [payload] validate_pre thread has finished
[2025-05-18 14:40:13] 2025-05-18 12:22:55,696 | INFO     | [job] job monitor thread has finished
[2025-05-18 14:40:13] 2025-05-18 12:22:55,700 | INFO     | [job] validate thread has finished
[2025-05-18 14:40:13] 2025-05-18 12:22:55,734 | INFO     | all payload control threads have been joined
[2025-05-18 14:40:13] 2025-05-18 12:22:55,802 | INFO     | [payload] failed_post thread has finished
[2025-05-18 14:40:13] 2025-05-18 12:22:55,858 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-18 14:40:13] 2025-05-18 12:22:55,939 | INFO     | [data] control thread has finished
[2025-05-18 14:40:13] 2025-05-18 12:22:56,201 | INFO     | [job] control thread has finished
[2025-05-18 14:40:13] 2025-05-18 12:22:56,220 | INFO     | [job] create_data_payload thread has finished
[2025-05-18 14:40:13] 2025-05-18 12:22:56,322 | INFO     | [data] copytool_out thread has finished
[2025-05-18 14:40:13] 2025-05-18 12:22:56,340 | INFO     | [payload] validate_post thread has finished
[2025-05-18 14:40:13] 2025-05-18 12:22:56,635 | INFO     | [data] copytool_in thread has finished
[2025-05-18 14:40:13] 2025-05-18 12:22:56,740 | INFO     | [payload] control thread has finished
[2025-05-18 14:40:13] 2025-05-18 12:22:56,864 | INFO     | [job] queue monitor thread has finished
[2025-05-18 14:40:13] 2025-05-18 12:22:57,338 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-18 14:40:13] 2025-05-18 12:23:01,347 | INFO     | [data] queue_monitor thread has finished
[2025-05-18 14:40:13] 2025-05-18 12:23:04,550 | INFO     | job.realtimelogging is not enabled
[2025-05-18 14:40:13] 2025-05-18 12:23:05,556 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-18 14:40:13] 2025-05-18 12:23:05,867 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139686006269760)>', '<ExcThread(monitor, started 139685347190528)>']
[2025-05-18 14:40:13] 2025-05-18 12:23:06,387 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-18 14:40:13] 2025-05-18 12:23:06,387 | INFO     | [monitor] control thread has ended
[2025-05-18 14:40:13] 2025-05-18 12:23:10,893 | INFO     | all workflow threads have been joined
[2025-05-18 14:40:13] 2025-05-18 12:23:10,894 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-18 14:40:13] 2025-05-18 12:23:10,894 | INFO     | traces error code: 0
[2025-05-18 14:40:13] 2025-05-18 12:23:10,894 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-18 14:40:13] 2025-05-18 12:23:11,347 [wrapper] ==== pilot stdout END ====
[2025-05-18 14:40:13] 2025-05-18 12:23:11,439 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-18 14:40:13] 2025-05-18 12:23:11,532 [wrapper] pilotpid: 19656
[2025-05-18 14:40:13] 2025-05-18 12:23:11,657 [wrapper] Pilot exit status: 0
[2025-05-18 14:40:13] 2025-05-18 12:23:12,114 [wrapper] pandaids: 6653397634
[2025-05-18 14:40:13] 2025-05-18 12:23:12,796 [wrapper] cleanup supervisor_pilot 32502 19657
[2025-05-18 14:40:13] 2025-05-18 12:23:12,918 [wrapper] Test setup, not cleaning
[2025-05-18 14:40:13] 2025-05-18 12:23:13,050 [wrapper] apfmon messages muted
[2025-05-18 14:40:13] 2025-05-18 12:23:13,113 [wrapper] ==== wrapper stdout END ====
[2025-05-18 14:40:13] 2025-05-18 12:23:13,169 [wrapper] ==== wrapper stderr END ====
[2025-05-18 14:40:13]  *** Error codes and diagnostics ***
[2025-05-18 14:40:13]     "exeErrorCode": 0,
[2025-05-18 14:40:13]     "exeErrorDiag": "",
[2025-05-18 14:40:13]     "pilotErrorCode": 0,
[2025-05-18 14:40:13]     "pilotErrorDiag": "",
[2025-05-18 14:40:13]  *** Listing of results directory ***
[2025-05-18 14:40:13] total 410828
[2025-05-18 14:40:13] -rw-r--r--. 1 boinc boinc    495897 May 17 10:55 pilot3.tar.gz
[2025-05-18 14:40:13] -rw-r--r--. 1 boinc boinc      5111 May 17 11:08 queuedata.json
[2025-05-18 14:40:13] -rwx------. 1 boinc boinc     37140 May 17 11:08 runpilot2-wrapper.sh
[2025-05-18 14:40:13] -rw-r--r--. 1 boinc boinc       100 May 18 09:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-18 14:40:13] -rwxr-xr-x. 1 boinc boinc      7986 May 18 09:05 run_atlas
[2025-05-18 14:40:13] -rw-r--r--. 1 boinc boinc       105 May 18 09:05 job.xml
[2025-05-18 14:40:13] -rw-r--r--. 1 boinc boinc      6372 May 18 09:05 init_data.xml
[2025-05-18 14:40:13] -rw-r--r--. 2 boinc boinc 220730178 May 18 09:05 EVNT.44638096._002132.pool.root.1
[2025-05-18 14:40:13] -rw-r--r--. 2 boinc boinc     17569 May 18 09:05 start_atlas.sh
[2025-05-18 14:40:13] drwxrwx--x. 2 boinc boinc        68 May 18 09:05 shared
[2025-05-18 14:40:13] -rw-r--r--. 2 boinc boinc    508882 May 18 09:05 input.tar.gz
[2025-05-18 14:40:13] -rw-r--r--. 1 boinc boinc         0 May 18 09:05 boinc_lockfile
[2025-05-18 14:40:13] -rw-r--r--. 1 boinc boinc      2539 May 18 09:05 pandaJob.out
[2025-05-18 14:40:13] -rw-------. 1 boinc boinc       424 May 18 09:06 setup.sh.local
[2025-05-18 14:40:13] -rw-------. 1 boinc boinc    994627 May 18 09:09 agis_schedconf.cvmfs.json
[2025-05-18 14:40:13] drwx------. 4 boinc boinc      4096 May 18 09:09 pilot3
[2025-05-18 14:40:13] -rw-------. 1 boinc boinc 192069077 May 18 14:19 HITS.44638099._053317.pool.root.1
[2025-05-18 14:40:13] -rw-r--r--. 1 boinc boinc       531 May 18 14:20 boinc_task_state.xml
[2025-05-18 14:40:13] -rw-------. 1 boinc boinc      1018 May 18 14:21 memory_monitor_summary.json
[2025-05-18 14:40:13] -rw-------. 1 boinc boinc   1596741 May 18 14:21 agis_ddmendpoints.agis.ALL.json
[2025-05-18 14:40:13] -rw-------. 1 boinc boinc    426756 May 18 14:21 log.44638099._053317.job.log.tgz.1
[2025-05-18 14:40:13] -rw-------. 1 boinc boinc        95 May 18 14:22 pilot_heartbeat.json
[2025-05-18 14:40:13] -rw-------. 1 boinc boinc      7692 May 18 14:22 heartbeat.json
[2025-05-18 14:40:13] -rw-------. 1 boinc boinc      4611 May 18 14:23 pilotlog.txt
[2025-05-18 14:40:13] -rw-------. 1 boinc boinc   1602244 May 18 14:23 log.44638099._053317.job.log.1
[2025-05-18 14:40:13] -rw-------. 1 boinc boinc       357 May 18 14:23 output.list
[2025-05-18 14:40:13] -rw-r--r--. 1 boinc boinc       620 May 18 14:23 runtime_log
[2025-05-18 14:40:13] -rw-------. 1 boinc boinc   2048000 May 18 14:23 result.tar.gz
[2025-05-18 14:40:13] -rw-------. 1 boinc boinc       657 May 18 14:23 J6wNDmXiSa7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGCOKDm9NlLum.diag
[2025-05-18 14:40:13] -rw-r--r--. 1 boinc boinc     11013 May 18 14:23 runtime_log.err
[2025-05-18 14:40:13] -rw-r--r--. 1 boinc boinc      8192 May 18 14:40 boinc_mmap_file
[2025-05-18 14:40:13] -rw-r--r--. 1 boinc boinc        28 May 18 14:40 wrapper_checkpoint.txt
[2025-05-18 14:40:13] -rw-r--r--. 1 boinc boinc     20511 May 18 14:40 stderr.txt
[2025-05-18 14:40:13] HITS file was successfully produced:
[2025-05-18 14:40:13] -rw-------. 1 boinc boinc 192069077 May 18 14:19 shared/HITS.pool.root.1
[2025-05-18 14:40:13]  *** Contents of shared directory: ***
[2025-05-18 14:40:13] total 405648
[2025-05-18 14:40:13] -rw-r--r--. 2 boinc boinc 220730178 May 18 09:05 ATLAS.root_0
[2025-05-18 14:40:13] -rw-r--r--. 2 boinc boinc     17569 May 18 09:05 start_atlas.sh
[2025-05-18 14:40:13] -rw-r--r--. 2 boinc boinc    508882 May 18 09:05 input.tar.gz
[2025-05-18 14:40:13] -rw-------. 1 boinc boinc 192069077 May 18 14:19 HITS.pool.root.1
[2025-05-18 14:40:13] -rw-------. 1 boinc boinc   2048000 May 18 14:23 result.tar.gz
14:40:14 (15471): run_atlas exited; CPU time 66845.726711
14:40:14 (15471): called boinc_finish(0)

</stderr_txt>
]]>

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