Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:54:12 (6655): wrapper (7.7.26015): starting
09:54:12 (6655): wrapper: running run_atlas (--nthreads 8)
[2025-05-18 09:54:12] Arguments: --nthreads 8
[2025-05-18 09:54:12] Threads: 8
[2025-05-18 09:54:12] Checking for CVMFS
[2025-05-18 09:54:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-18 09:54:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-18 09:54:13] Running cvmfs_config stat atlas.cern.ch
[2025-05-18 09:54:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-18 09:54:14] 2.11.2.0 3140 8476 89464 146128 2 59 18450845 25165825 4254 130560 0 6330514 99.795 7561847 1293 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-18 09:54:14] CVMFS is ok
[2025-05-18 09:54:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-18 09:54:14] Checking for apptainer binary...
[2025-05-18 09:54:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-18 09:54:14] Running /usr/bin/apptainer --version
[2025-05-18 09:54:14] apptainer version 1.3.2-1.el7
[2025-05-18 09:54:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-18 09:58:08] cg-vwn243.simple-grid.lan
[2025-05-18 09:58:08] apptainer works
[2025-05-18 09:58:08] Set ATHENA_PROC_NUMBER=8
[2025-05-18 09:58:08] Set ATHENA_CORE_NUMBER=8
[2025-05-18 09:58:08] Starting ATLAS job with PandaID=6653397577
[2025-05-18 09:58:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-18 15:01:36]  *** The last 200 lines of the pilot log: ***
[2025-05-18 15:01:36] 2025-05-18 12:58:48,913 | INFO     | -- intersect: -3068476855.3429027
[2025-05-18 15:01:36] 2025-05-18 12:58:48,913 | INFO     | intersect: -3068476855.3429027
[2025-05-18 15:01:36] 2025-05-18 12:58:48,914 | INFO     | chi2: 0.3997194876311265
[2025-05-18 15:01:36] 2025-05-18 12:58:48,914 | INFO     | current chi2=0.3997194876311265 (change=75.4385444878772 %)
[2025-05-18 15:01:36] 2025-05-18 12:58:48,915 | INFO     | sum of square deviations: 6662039329.5
[2025-05-18 15:01:36] 2025-05-18 12:58:48,917 | INFO     | sum of deviations: -8036318760.500002
[2025-05-18 15:01:36] 2025-05-18 12:58:48,918 | INFO     | mean x: 1747564522.5
[2025-05-18 15:01:36] 2025-05-18 12:58:48,918 | INFO     | mean y: 2510601.2697841725
[2025-05-18 15:01:36] 2025-05-18 12:58:48,918 | INFO     | -- intersect: 2110571641.2524178
[2025-05-18 15:01:36] 2025-05-18 12:58:48,918 | INFO     | intersect: 2110571641.2524178
[2025-05-18 15:01:36] 2025-05-18 12:58:48,918 | INFO     | chi2: 0.08782150436048272
[2025-05-18 15:01:36] 2025-05-18 12:58:48,919 | INFO     | current chi2=0.08782150436048272 (change=78.02921621836784 %)
[2025-05-18 15:01:36] 2025-05-18 12:58:48,919 | INFO     | sum of square deviations: 6309000152.0
[2025-05-18 15:01:36] 2025-05-18 12:58:48,922 | INFO     | sum of deviations: 356547439.9999999
[2025-05-18 15:01:36] 2025-05-18 12:58:48,922 | INFO     | mean x: 1747564675.0
[2025-05-18 15:01:36] 2025-05-18 12:58:48,922 | INFO     | mean y: 2506972.542124542
[2025-05-18 15:01:36] 2025-05-18 12:58:48,922 | INFO     | -- intersect: -96255065.19663788
[2025-05-18 15:01:36] 2025-05-18 12:58:48,922 | INFO     | intersect: -96255065.19663788
[2025-05-18 15:01:36] 2025-05-18 12:58:48,923 | INFO     | chi2: 0.05826885219749653
[2025-05-18 15:01:36] 2025-05-18 12:58:48,923 | INFO     | current chi2=0.05826885219749653 (change=33.650815228216565 %)
[2025-05-18 15:01:36] 2025-05-18 12:58:48,924 | INFO     | sum of square deviations: 5968658887.0
[2025-05-18 15:01:36] 2025-05-18 12:58:48,926 | INFO     | sum of deviations: 10013650626.999998
[2025-05-18 15:01:36] 2025-05-18 12:58:48,926 | INFO     | mean x: 1747564827.5
[2025-05-18 15:01:36] 2025-05-18 12:58:48,926 | INFO     | mean y: 2502643.529850746
[2025-05-18 15:01:36] 2025-05-18 12:58:48,927 | INFO     | -- intersect: -2929396123.332702
[2025-05-18 15:01:36] 2025-05-18 12:58:48,927 | INFO     | intersect: -2929396123.332702
[2025-05-18 15:01:36] 2025-05-18 12:58:48,927 | INFO     | chi2: 0.012069101642913424
[2025-05-18 15:01:36] 2025-05-18 12:58:48,927 | INFO     | current chi2=0.012069101642913424 (change=79.28721574606207 %)
[2025-05-18 15:01:36] 2025-05-18 12:58:48,928 | INFO     | sum of square deviations: 5640782972.0
[2025-05-18 15:01:36] 2025-05-18 12:58:48,930 | INFO     | sum of deviations: 10603207514.000002
[2025-05-18 15:01:36] 2025-05-18 12:58:48,931 | INFO     | mean x: 1747564980.0
[2025-05-18 15:01:36] 2025-05-18 12:58:48,931 | INFO     | mean y: 2502384.577946768
[2025-05-18 15:01:36] 2025-05-18 12:58:48,931 | INFO     | -- intersect: -3282466070.8861938
[2025-05-18 15:01:36] 2025-05-18 12:58:48,931 | INFO     | intersect: -3282466070.8861938
[2025-05-18 15:01:36] 2025-05-18 12:58:48,931 | INFO     | chi2: 0.0004689386045565212
[2025-05-18 15:01:36] 2025-05-18 12:58:48,932 | INFO     | current chi2=0.0004689386045565212 (change=96.11455252900396 %)
[2025-05-18 15:01:36] 2025-05-18 12:58:48,932 | INFO     | sum of square deviations: 5325139844.5
[2025-05-18 15:01:36] 2025-05-18 12:58:48,934 | INFO     | sum of deviations: 9565035825.999998
[2025-05-18 15:01:36] 2025-05-18 12:58:48,935 | INFO     | mean x: 1747565132.5
[2025-05-18 15:01:36] 2025-05-18 12:58:48,935 | INFO     | mean y: 2502885.7674418604
[2025-05-18 15:01:36] 2025-05-18 12:58:48,935 | INFO     | -- intersect: -3136480049.656374
[2025-05-18 15:01:36] 2025-05-18 12:58:48,935 | INFO     | intersect: -3136480049.656374
[2025-05-18 15:01:36] 2025-05-18 12:58:48,935 | INFO     | chi2: 0.0003584822967223933
[2025-05-18 15:01:36] 2025-05-18 12:58:48,936 | INFO     | current chi2=0.0003584822967223933 (change=23.554535020333255 %)
[2025-05-18 15:01:36] 2025-05-18 12:58:48,936 | INFO     | left removable region: 70
[2025-05-18 15:01:36] 2025-05-18 12:58:48,936 | INFO     | sum of square deviations: 3168461268.0
[2025-05-18 15:01:36] 2025-05-18 12:58:48,938 | INFO     | sum of deviations: 5126608665.0
[2025-05-18 15:01:36] 2025-05-18 12:58:48,938 | INFO     | mean x: 1747566017.0
[2025-05-18 15:01:36] 2025-05-18 12:58:48,938 | INFO     | mean y: 2504524.6405529953
[2025-05-18 15:01:36] 2025-05-18 12:58:48,938 | INFO     | -- intersect: -2825078433.653554
[2025-05-18 15:01:36] 2025-05-18 12:58:48,938 | INFO     | intersect: -2825078433.653554
[2025-05-18 15:01:36] 2025-05-18 12:58:48,939 | INFO     | chi2: 0.00015924231824356508
[2025-05-18 15:01:36] 2025-05-18 12:58:48,939 | INFO     | -- intersect: -2825078433.653554
[2025-05-18 15:01:36] 2025-05-18 12:58:48,939 | INFO     | current memory leak: 1.62 B/s (using 217 data points, chi2=0.00)
[2025-05-18 15:01:36] 2025-05-18 12:58:48,940 | INFO     | ..............................
[2025-05-18 15:01:36] 2025-05-18 12:58:48,940 | INFO     | . Timing measurements:
[2025-05-18 15:01:36] 2025-05-18 12:58:48,940 | INFO     | . get job = 0 s
[2025-05-18 15:01:36] 2025-05-18 12:58:48,941 | INFO     | . initial setup = 2 s
[2025-05-18 15:01:36] 2025-05-18 12:58:48,941 | INFO     | . payload setup = 8 s
[2025-05-18 15:01:36] 2025-05-18 12:58:48,941 | INFO     | . stage-in = 0 s
[2025-05-18 15:01:36] 2025-05-18 12:58:48,941 | INFO     | . payload execution = 17884 s
[2025-05-18 15:01:36] 2025-05-18 12:58:48,941 | INFO     | . stage-out = 4 s
[2025-05-18 15:01:36] 2025-05-18 12:58:48,941 | INFO     | . log creation = 1 s
[2025-05-18 15:01:36] 2025-05-18 12:58:48,941 | INFO     | ..............................
[2025-05-18 15:01:36] 2025-05-18 12:58:49,070 | INFO     | 
[2025-05-18 15:01:36] 2025-05-18 12:58:49,070 | INFO     | job summary report
[2025-05-18 15:01:36] 2025-05-18 12:58:49,070 | INFO     | --------------------------------------------------
[2025-05-18 15:01:36] 2025-05-18 12:58:49,070 | INFO     | PanDA job id: 6653397577
[2025-05-18 15:01:36] 2025-05-18 12:58:49,070 | INFO     | task id: 44638099
[2025-05-18 15:01:36] 2025-05-18 12:58:49,070 | INFO     | errors: (none)
[2025-05-18 15:01:36] 2025-05-18 12:58:49,071 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-18 15:01:36] 2025-05-18 12:58:49,071 | INFO     | pilot state: finished 
[2025-05-18 15:01:36] 2025-05-18 12:58:49,071 | INFO     | transexitcode: 0
[2025-05-18 15:01:36] 2025-05-18 12:58:49,071 | INFO     | exeerrorcode: 0
[2025-05-18 15:01:36] 2025-05-18 12:58:49,071 | INFO     | exeerrordiag: 
[2025-05-18 15:01:36] 2025-05-18 12:58:49,071 | INFO     | exitcode: 0
[2025-05-18 15:01:36] 2025-05-18 12:58:49,071 | INFO     | exitmsg: OK
[2025-05-18 15:01:36] 2025-05-18 12:58:49,071 | INFO     | cpuconsumptiontime: 67177 s
[2025-05-18 15:01:36] 2025-05-18 12:58:49,071 | INFO     | nevents: 400
[2025-05-18 15:01:36] 2025-05-18 12:58:49,071 | INFO     | neventsw: 0
[2025-05-18 15:01:36] 2025-05-18 12:58:49,071 | INFO     | pid: 23006
[2025-05-18 15:01:36] 2025-05-18 12:58:49,072 | INFO     | pgrp: 23006
[2025-05-18 15:01:36] 2025-05-18 12:58:49,072 | INFO     | corecount: 8
[2025-05-18 15:01:36] 2025-05-18 12:58:49,072 | INFO     | event service: False
[2025-05-18 15:01:36] 2025-05-18 12:58:49,072 | INFO     | sizes: {0: 2393662, 1: 2393690, 9: 2393896, 12: 2393924, 17897: 2425346, 17903: 2434471, 17996: 2434585}
[2025-05-18 15:01:36] 2025-05-18 12:58:49,072 | INFO     | --------------------------------------------------
[2025-05-18 15:01:36] 2025-05-18 12:58:49,072 | INFO     | 
[2025-05-18 15:01:36] 2025-05-18 12:58:49,072 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-05-18 15:01:36] 2025-05-18 12:58:49,112 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-18 15:01:36] 2025-05-18 12:58:49,112 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-18 15:01:36] 2025-05-18 12:58:49,112 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-18 15:01:36] 2025-05-18 12:58:49,112 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-18 15:01:36] 2025-05-18 12:58:49,112 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-18 15:01:36] 2025-05-18 12:58:49,112 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-18 15:01:36] 2025-05-18 12:58:49,112 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-18 15:01:36] 2025-05-18 12:58:49,112 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-18 15:01:36] 2025-05-18 12:58:49,113 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-18 15:01:36] 2025-05-18 12:58:49,113 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-18 15:01:36] 2025-05-18 12:58:49,113 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-18 15:01:36] 2025-05-18 12:58:49,113 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-18 15:01:36] 2025-05-18 12:58:49,113 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-18 15:01:36] 2025-05-18 12:58:49,113 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-18 15:01:36] 2025-05-18 12:58:49,113 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-18 15:01:36] 2025-05-18 12:58:49,113 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-18 15:01:36] 2025-05-18 12:58:49,113 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-18 15:01:36] 2025-05-18 12:58:49,113 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-18 15:01:36] 2025-05-18 12:58:49,114 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-18 15:01:36] 2025-05-18 12:58:49,114 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-18 15:01:36] 2025-05-18 12:58:49,114 | INFO     | job 6653397577 has completed (purged errors)
[2025-05-18 15:01:36] 2025-05-18 12:58:49,114 | INFO     | overall cleanup function is called
[2025-05-18 15:01:36] 2025-05-18 12:58:50,124 | INFO     | --- collectZombieJob: --- 10, [23006]
[2025-05-18 15:01:36] 2025-05-18 12:58:50,124 | INFO     | zombie collector waiting for pid 23006
[2025-05-18 15:01:36] 2025-05-18 12:58:50,124 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-18 15:01:36] 2025-05-18 12:58:50,124 | INFO     | collected zombie processes
[2025-05-18 15:01:36] 2025-05-18 12:58:50,124 | INFO     | will attempt to kill all subprocesses of pid=23006
[2025-05-18 15:01:36] 2025-05-18 12:58:50,256 | INFO     | process IDs to be killed: [23006] (in reverse order)
[2025-05-18 15:01:36] 2025-05-18 12:58:51,013 | WARNING  | found no corresponding commands to process id(s)
[2025-05-18 15:01:36] 2025-05-18 12:58:51,014 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-18 15:01:36] 2025-05-18 12:58:51,017 | INFO     | did not find any defunct processes belonging to 23006
[2025-05-18 15:01:36] 2025-05-18 12:58:51,021 | INFO     | did not find any defunct processes belonging to 23006
[2025-05-18 15:01:36] 2025-05-18 12:58:51,021 | INFO     | ready for new job
[2025-05-18 15:01:36] 2025-05-18 12:58:51,021 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-18 15:01:36] 2025-05-18 12:58:51,023 | INFO     | **************************************
[2025-05-18 15:01:36] 2025-05-18 12:58:51,024 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-18 15:01:36] 2025-05-18 12:58:51,024 | INFO     | **************************************
[2025-05-18 15:01:36] 2025-05-18 12:58:51,024 | INFO     | 
[2025-05-18 15:01:36] 2025-05-18 12:58:51,024 | INFO     | pilot is running in a VM
[2025-05-18 15:01:36] 2025-05-18 12:58:51,025 | INFO     | architecture information:
[2025-05-18 15:01:36] 2025-05-18 12:58:51,042 | INFO     | executing command: cat /etc/os-release
[2025-05-18 15:01:36] 2025-05-18 12:58:51,294 | INFO     | cat /etc/os-release:
[2025-05-18 15:01:36] NAME="CentOS Linux"
[2025-05-18 15:01:36] VERSION="7 (Core)"
[2025-05-18 15:01:36] ID="centos"
[2025-05-18 15:01:36] ID_LIKE="rhel fedora"
[2025-05-18 15:01:36] VERSION_ID="7"
[2025-05-18 15:01:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-18 15:01:36] ANSI_COLOR="0;31"
[2025-05-18 15:01:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-18 15:01:36] HOME_URL="https://www.centos.org/"
[2025-05-18 15:01:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-18 15:01:36] 
[2025-05-18 15:01:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-18 15:01:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-18 15:01:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-18 15:01:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-18 15:01:36] 
[2025-05-18 15:01:36] 2025-05-18 12:58:51,295 | INFO     | **************************************
[2025-05-18 15:01:36] 2025-05-18 12:58:51,798 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-05-18 15:01:36] 2025-05-18 12:58:51,942 | INFO     | sufficient remaining disk space (496586719232 B)
[2025-05-18 15:01:36] 2025-05-18 12:58:51,942 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-18 15:01:36] 2025-05-18 12:58:51,942 | INFO     | current server update state: UPDATING_FINAL
[2025-05-18 15:01:36] 2025-05-18 12:58:51,942 | INFO     | update_server=False
[2025-05-18 15:01:36] 2025-05-18 12:58:51,942 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-18 15:01:36] 2025-05-18 12:58:51,943 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-18 15:01:36] 2025-05-18 12:58:51,943 | INFO     | found 0 job(s) in 20 queues
[2025-05-18 15:01:36] 2025-05-18 12:58:51,943 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-18 15:01:36] 2025-05-18 12:58:51,944 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-18 15:01:36] 2025-05-18 12:58:52,119 | INFO     | all payload control threads have been joined
[2025-05-18 15:01:36] 2025-05-18 12:58:52,221 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-18 15:01:36] 2025-05-18 12:58:52,236 | INFO     | all data control threads have been joined
[2025-05-18 15:01:36] 2025-05-18 12:58:52,267 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-18 15:01:36] 2025-05-18 12:58:52,267 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-18 15:01:36] 2025-05-18 12:58:52,267 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-18 15:01:36] 2025-05-18 12:58:52,267 | INFO     | will abort loop
[2025-05-18 15:01:36] 2025-05-18 12:58:52,745 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-18 15:01:36] 2025-05-18 12:58:52,948 | INFO     | [job] retrieve thread has finished
[2025-05-18 15:01:36] 2025-05-18 12:58:53,125 | INFO     | [payload] control thread has finished
[2025-05-18 15:01:36] 2025-05-18 12:58:53,211 | INFO     | all job control threads have been joined
[2025-05-18 15:01:36] 2025-05-18 12:58:53,242 | INFO     | [data] control thread has finished
[2025-05-18 15:01:36] 2025-05-18 12:58:53,273 | INFO     | [job] job monitor thread has finished
[2025-05-18 15:01:36] 2025-05-18 12:58:53,315 | INFO     | [payload] execute_payloads thread has finished
[2025-05-18 15:01:36] 2025-05-18 12:58:53,798 | INFO     | [data] copytool_in thread has finished
[2025-05-18 15:01:36] 2025-05-18 12:58:53,971 | INFO     | [payload] validate_pre thread has finished
[2025-05-18 15:01:36] 2025-05-18 12:58:53,988 | INFO     | [payload] failed_post thread has finished
[2025-05-18 15:01:36] 2025-05-18 12:58:53,998 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-18 15:01:36] 2025-05-18 12:58:54,026 | INFO     | [payload] validate_post thread has finished
[2025-05-18 15:01:36] 2025-05-18 12:58:54,084 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-18 15:01:36] 2025-05-18 12:58:54,152 | INFO     | [job] create_data_payload thread has finished
[2025-05-18 15:01:36] 2025-05-18 12:58:54,219 | INFO     | [job] control thread has finished
[2025-05-18 15:01:36] 2025-05-18 12:58:54,228 | INFO     | [data] copytool_out thread has finished
[2025-05-18 15:01:36] 2025-05-18 12:58:54,229 | INFO     | [job] validate thread has finished
[2025-05-18 15:01:36] 2025-05-18 12:58:55,090 | INFO     | [job] queue monitor thread has finished
[2025-05-18 15:01:36] 2025-05-18 12:58:56,754 | INFO     | [data] queue_monitor thread has finished
[2025-05-18 15:01:36] 2025-05-18 12:58:56,904 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140651666184000)>', '<ExcThread(monitor, started 140651228284672)>']
[2025-05-18 15:01:36] 2025-05-18 12:58:56,975 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-18 15:01:36] 2025-05-18 12:58:56,975 | INFO     | [monitor] control thread has ended
[2025-05-18 15:01:36] 2025-05-18 12:59:01,930 | INFO     | all workflow threads have been joined
[2025-05-18 15:01:36] 2025-05-18 12:59:01,930 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-18 15:01:36] 2025-05-18 12:59:01,931 | INFO     | traces error code: 0
[2025-05-18 15:01:36] 2025-05-18 12:59:01,931 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-18 15:01:36] 2025-05-18 12:59:02,299 [wrapper] ==== pilot stdout END ====
[2025-05-18 15:01:36] 2025-05-18 12:59:02,397 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-18 15:01:36] 2025-05-18 12:59:02,492 [wrapper] pilotpid: 14526
[2025-05-18 15:01:36] 2025-05-18 12:59:02,591 [wrapper] Pilot exit status: 0
[2025-05-18 15:01:36] 2025-05-18 12:59:03,073 [wrapper] pandaids: 6653397577
[2025-05-18 15:01:36] 2025-05-18 12:59:03,951 [wrapper] cleanup supervisor_pilot  3886 14527
[2025-05-18 15:01:36] 2025-05-18 12:59:04,051 [wrapper] Test setup, not cleaning
[2025-05-18 15:01:36] 2025-05-18 12:59:04,108 [wrapper] apfmon messages muted
[2025-05-18 15:01:36] 2025-05-18 12:59:04,164 [wrapper] ==== wrapper stdout END ====
[2025-05-18 15:01:36] 2025-05-18 12:59:04,222 [wrapper] ==== wrapper stderr END ====
[2025-05-18 15:01:36]  *** Error codes and diagnostics ***
[2025-05-18 15:01:36]     "exeErrorCode": 0,
[2025-05-18 15:01:36]     "exeErrorDiag": "",
[2025-05-18 15:01:36]     "pilotErrorCode": 0,
[2025-05-18 15:01:36]     "pilotErrorDiag": "",
[2025-05-18 15:01:36]  *** Listing of results directory ***
[2025-05-18 15:01:36] total 414164
[2025-05-18 15:01:36] -rw-r--r--. 1 boinc boinc    495897 May 17 10:55 pilot3.tar.gz
[2025-05-18 15:01:36] -rw-r--r--. 1 boinc boinc      5111 May 17 11:01 queuedata.json
[2025-05-18 15:01:36] -rwx------. 1 boinc boinc     37140 May 17 11:03 runpilot2-wrapper.sh
[2025-05-18 15:01:36] -rw-r--r--. 1 boinc boinc       100 May 18 09:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-18 15:01:36] -rwxr-xr-x. 1 boinc boinc      7986 May 18 09:54 run_atlas
[2025-05-18 15:01:36] -rw-r--r--. 1 boinc boinc       105 May 18 09:54 job.xml
[2025-05-18 15:01:36] -rw-r--r--. 1 boinc boinc      6371 May 18 09:54 init_data.xml
[2025-05-18 15:01:36] -rw-r--r--. 2 boinc boinc 221866029 May 18 09:54 EVNT.44638096._002130.pool.root.1
[2025-05-18 15:01:36] -rw-r--r--. 2 boinc boinc     17569 May 18 09:54 start_atlas.sh
[2025-05-18 15:01:36] drwxrwx--x. 2 boinc boinc        68 May 18 09:54 shared
[2025-05-18 15:01:36] -rw-r--r--. 2 boinc boinc    508880 May 18 09:54 input.tar.gz
[2025-05-18 15:01:36] -rw-r--r--. 1 boinc boinc         0 May 18 09:54 boinc_lockfile
[2025-05-18 15:01:36] -rw-r--r--. 1 boinc boinc      2539 May 18 09:58 pandaJob.out
[2025-05-18 15:01:36] -rw-------. 1 boinc boinc       424 May 18 09:58 setup.sh.local
[2025-05-18 15:01:36] -rw-------. 1 boinc boinc    994627 May 18 09:58 agis_schedconf.cvmfs.json
[2025-05-18 15:01:36] drwx------. 4 boinc boinc      4096 May 18 09:58 pilot3
[2025-05-18 15:01:36] -rw-------. 1 boinc boinc 194450191 May 18 14:56 HITS.44638099._053260.pool.root.1
[2025-05-18 15:01:36] -rw-r--r--. 1 boinc boinc       531 May 18 14:56 boinc_task_state.xml
[2025-05-18 15:01:36] -rw-------. 1 boinc boinc      1028 May 18 14:57 memory_monitor_summary.json
[2025-05-18 15:01:36] -rw-------. 1 boinc boinc   1596741 May 18 14:57 agis_ddmendpoints.agis.ALL.json
[2025-05-18 15:01:36] -rw-------. 1 boinc boinc    415307 May 18 14:57 log.44638099._053260.job.log.tgz.1
[2025-05-18 15:01:36] -rw-------. 1 boinc boinc        95 May 18 14:57 pilot_heartbeat.json
[2025-05-18 15:01:36] -rw-------. 1 boinc boinc      7683 May 18 14:58 heartbeat.json
[2025-05-18 15:01:36] -rw-------. 1 boinc boinc      4725 May 18 14:59 pilotlog.txt
[2025-05-18 15:01:36] -rw-------. 1 boinc boinc   1563303 May 18 14:59 log.44638099._053260.job.log.1
[2025-05-18 15:01:36] -rw-------. 1 boinc boinc       357 May 18 14:59 output.list
[2025-05-18 15:01:36] -rw-r--r--. 1 boinc boinc       620 May 18 14:59 runtime_log
[2025-05-18 15:01:36] -rw-------. 1 boinc boinc   1996800 May 18 14:59 result.tar.gz
[2025-05-18 15:01:36] -rw-r--r--. 1 boinc boinc     11013 May 18 14:59 runtime_log.err
[2025-05-18 15:01:36] -rw-------. 1 boinc boinc       656 May 18 14:59 le3NDm8cSa7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmcBOKDm1pbqXm.diag
[2025-05-18 15:01:36] -rw-r--r--. 1 boinc boinc      8192 May 18 15:01 boinc_mmap_file
[2025-05-18 15:01:36] -rw-r--r--. 1 boinc boinc        28 May 18 15:01 wrapper_checkpoint.txt
[2025-05-18 15:01:36] -rw-r--r--. 1 boinc boinc     20534 May 18 15:01 stderr.txt
[2025-05-18 15:01:36] HITS file was successfully produced:
[2025-05-18 15:01:36] -rw-------. 1 boinc boinc 194450191 May 18 14:56 shared/HITS.pool.root.1
[2025-05-18 15:01:36]  *** Contents of shared directory: ***
[2025-05-18 15:01:36] total 409036
[2025-05-18 15:01:36] -rw-r--r--. 2 boinc boinc 221866029 May 18 09:54 ATLAS.root_0
[2025-05-18 15:01:36] -rw-r--r--. 2 boinc boinc     17569 May 18 09:54 start_atlas.sh
[2025-05-18 15:01:36] -rw-r--r--. 2 boinc boinc    508880 May 18 09:54 input.tar.gz
[2025-05-18 15:01:36] -rw-------. 1 boinc boinc 194450191 May 18 14:56 HITS.pool.root.1
[2025-05-18 15:01:36] -rw-------. 1 boinc boinc   1996800 May 18 14:59 result.tar.gz
15:01:38 (6655): run_atlas exited; CPU time 67401.028234
15:01:38 (6655): called boinc_finish(0)

</stderr_txt>
]]>

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