Stderr output

<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-17 06:52:35 (20940): Detected: vboxwrapper 26206
2025-05-17 06:52:35 (20940): Detected: BOINC client v7.16.20
2025-05-17 06:52:36 (20940): Detected: VirtualBox VboxManage Interface (Version: 6.0.14)
2025-05-17 06:52:36 (20940): Successfully copied 'init_data.xml' to the shared directory.
2025-05-17 06:52:37 (20940): Create VM. (boinc_cbabc6a90507798a, slot#2)
2025-05-17 06:52:37 (20940): Setting Memory Size for VM. (4400MB)
2025-05-17 06:52:37 (20940): Setting CPU Count for VM. (4)
2025-05-17 06:52:38 (20940): Setting Chipset Options for VM.
2025-05-17 06:52:38 (20940): Setting Graphics Controller Options for VM.
2025-05-17 06:52:38 (20940): Setting Boot Options for VM.
2025-05-17 06:52:38 (20940): Setting Network Configuration for NAT.
2025-05-17 06:52:39 (20940): Enabling VM Network Access.
2025-05-17 06:52:39 (20940): Disabling USB Support for VM.
2025-05-17 06:52:39 (20940): Disabling COM Port Support for VM.
2025-05-17 06:52:39 (20940): Disabling LPT Port Support for VM.
2025-05-17 06:52:40 (20940): Disabling Audio Support for VM.
2025-05-17 06:52:40 (20940): Disabling Clipboard Support for VM.
2025-05-17 06:52:40 (20940): Disabling Drag and Drop Support for VM.
2025-05-17 06:52:41 (20940): Adding storage controller(s) to VM.
2025-05-17 06:52:41 (20940): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-17 06:52:41 (20940): Adding VirtualBox Guest Additions to VM.
2025-05-17 06:52:42 (20940): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-17 06:52:42 (20940): forwarding host port 51400 to guest port 80
2025-05-17 06:52:42 (20940): Enabling remote desktop for VM.
2025-05-17 06:52:42 (20940): Required extension pack not installed, remote desktop not enabled.
2025-05-17 06:52:42 (20940): Enabling shared directory for VM.
2025-05-17 06:52:43 (20940): Starting VM using VBoxManage interface. (boinc_cbabc6a90507798a, slot#2)
2025-05-17 06:52:46 (20940): Successfully started VM. (PID = '948')
2025-05-17 06:52:46 (20940): Reporting VM Process ID to BOINC.
2025-05-17 06:52:46 (20940): Guest Log: BIOS: VirtualBox 6.0.14
2025-05-17 06:52:46 (20940): Guest Log: CPUID EDX: 0x178bfbff
2025-05-17 06:52:46 (20940): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-17 06:52:46 (20940): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-17 06:52:46 (20940): Detected: Web Application Enabled (http://localhost:51400)
2025-05-17 06:52:46 (20940): Preference change detected
2025-05-17 06:52:46 (20940): Setting CPU throttle for VM. (90%)
2025-05-17 06:52:46 (20940): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-17 06:52:48 (20940): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-17 06:52:48 (20940): Guest Log: BIOS: Booting from Hard Disk...
2025-05-17 06:52:51 (20940): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-17 06:52:51 (20940): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-17 06:52:51 (20940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-17 06:52:51 (20940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-17 06:52:51 (20940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-17 06:52:51 (20940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-17 06:52:51 (20940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-17 06:52:51 (20940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-17 06:52:51 (20940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-17 06:52:51 (20940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-17 06:52:51 (20940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-17 06:52:51 (20940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-17 06:52:51 (20940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-17 06:52:51 (20940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-17 06:52:51 (20940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-17 06:52:51 (20940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-17 06:52:51 (20940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-17 06:52:51 (20940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-17 06:52:51 (20940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-17 06:52:51 (20940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-17 06:52:51 (20940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-17 06:52:51 (20940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-17 06:52:51 (20940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-17 06:52:51 (20940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-17 06:52:51 (20940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-17 06:52:51 (20940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-17 06:52:51 (20940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-17 06:52:51 (20940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-17 06:52:51 (20940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-17 06:52:51 (20940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-17 06:52:51 (20940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-17 06:52:51 (20940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-17 06:52:56 (20940): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-17 06:52:56 (20940): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-17 06:53:02 (20940): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-17 06:53:02 (20940): Guest Log: 00:00:00.000120 main     Log opened 2025-05-17T06:53:00.294917000Z
2025-05-17 06:53:02 (20940): Guest Log: 00:00:00.000189 main     OS Product: Linux
2025-05-17 06:53:02 (20940): Guest Log: 00:00:00.000216 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-17 06:53:02 (20940): Guest Log: 00:00:00.000238 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-17 06:53:02 (20940): Guest Log: 00:00:00.000260 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-17 06:53:02 (20940): Guest Log: 00:00:00.000261 main     Process ID: 1299
2025-05-17 06:53:02 (20940): Guest Log: 00:00:00.000261 main     Package type: LINUX_64BITS_GENERIC
2025-05-17 06:53:02 (20940): Guest Log: 00:00:00.000848 main     5.2.32 r132073 started. Verbose level = 0
2025-05-17 06:53:02 (20940): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-17 06:53:02 (20940): Guest Log: [INFO] Mounting shared directory
2025-05-17 06:53:02 (20940): Guest Log: [INFO] Checking for init_data.xml
2025-05-17 06:53:07 (20940): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-17 06:53:07 (20940): Guest Log: [INFO] Detected branch: prod
2025-05-17 06:53:07 (20940): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-17 06:53:07 (20940): Guest Log: Copying input files
2025-05-17 06:53:09 (20940): Guest Log: Copied input files into RunAtlas.
2025-05-17 06:53:09 (20940): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-17 06:53:09 (20940): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-17 06:53:09 (20940): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-17 06:53:09 (20940): Guest Log: Further information can be found at the LHC@home message board.
2025-05-17 06:53:12 (20940): Guest Log: 00:00:10.007234 timesync vgsvcTimeSyncWorker: Radical guest time change: 21 611 368 636 000ns (GuestNow=1 747 486 391 665 781 000 ns GuestLast=1 747 464 780 297 145 000 ns fSetTimeLastLoop=true )
2025-05-17 06:53:17 (20940): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-17 06:53:17 (20940): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-17 06:53:17 (20940): Guest Log: 2.6.3.0 1593 0 30148 146101 3 1 3117515 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-17 06:53:18 (20940): Guest Log: copied the webapp to /var/www
2025-05-17 06:53:18 (20940): Guest Log: ATHENA_PROC_NUMBER=4
2025-05-17 06:53:18 (20940): Guest Log: ATHENA_CORE_NUMBER=4
2025-05-17 06:53:18 (20940): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-17 06:53:18 (20940): Guest Log:  *** Starting ATLAS job. (PandaID=6653397165 taskID=44638099) ***
2025-05-17 06:59:38 (20940): Guest Log:  *** Job finished ***
2025-05-17 06:59:38 (20940): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-17 06:59:38 (20940): Guest Log: 2025-05-17 12:59:28,338 | INFO     | [data] copytool_out thread has finished
2025-05-17 06:59:38 (20940): Guest Log: 2025-05-17 12:59:28,785 | INFO     | [job] queue monitor thread has finished
2025-05-17 06:59:38 (20940): Guest Log: 2025-05-17 12:59:29,691 | INFO     | [data] queue_monitor thread has finished
2025-05-17 06:59:38 (20940): Guest Log: 2025-05-17 12:59:31,607 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140206382266176)>', '<ExcThread(monitor, started 140205541533440)>']
2025-05-17 06:59:38 (20940): Guest Log: 2025-05-17 12:59:32,342 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-17 06:59:38 (20940): Guest Log: 2025-05-17 12:59:32,342 | INFO     | [monitor] control thread has ended
2025-05-17 06:59:38 (20940): Guest Log: 2025-05-17 12:59:36,612 | INFO     | all workflow threads have been joined
2025-05-17 06:59:38 (20940): Guest Log: 2025-05-17 12:59:36,613 | INFO     | end of generic workflow (traces error code: 0)
2025-05-17 06:59:38 (20940): Guest Log: 2025-05-17 12:59:36,613 | INFO     | traces error code: 0
2025-05-17 06:59:38 (20940): Guest Log: 2025-05-17 12:59:36,614 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-17 06:59:38 (20940): Guest Log: 2025-05-17 12:59:36,677 [wrapper] ==== pilot stdout END ====
2025-05-17 06:59:38 (20940): Guest Log: 2025-05-17 12:59:36,681 [wrapper] ==== wrapper stdout RESUME ====
2025-05-17 06:59:38 (20940): Guest Log: 2025-05-17 12:59:36,684 [wrapper] pilotpid: 5915
2025-05-17 06:59:38 (20940): Guest Log: 2025-05-17 12:59:36,688 [wrapper] Pilot exit status: 0
2025-05-17 06:59:38 (20940): Guest Log: 2025-05-17 12:59:36,865 [wrapper] pandaids: 6653397165
2025-05-17 06:59:38 (20940): Guest Log: 2025-05-17 12:59:36,885 [wrapper] cleanup supervisor_pilot  5921 5916
2025-05-17 06:59:38 (20940): Guest Log: 2025-05-17 12:59:36,893 [wrapper] Test setup, not cleaning
2025-05-17 06:59:38 (20940): Guest Log: 2025-05-17 12:59:36,896 [wrapper] apfmon messages muted
2025-05-17 06:59:38 (20940): Guest Log: 2025-05-17 12:59:36,900 [wrapper] ==== wrapper stdout END ====
2025-05-17 06:59:38 (20940): Guest Log: 2025-05-17 12:59:36,903 [wrapper] ==== wrapper stderr END ====
2025-05-17 06:59:38 (20940): Guest Log:  *** Error codes and diagnostics ***
2025-05-17 06:59:38 (20940): Guest Log:     "exeErrorCode": 65,
2025-05-17 06:59:38 (20940): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2025-05-17 06:59:38 (20940): Guest Log:     "pilotErrorCode": 1305,
2025-05-17 06:59:38 (20940): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2025-05-17 06:59:38 (20940): Guest Log:  *** Listing of results directory ***
2025-05-17 06:59:38 (20940): Guest Log: total 3888
2025-05-17 06:59:38 (20940): Guest Log: -rw-r--r--. 1 atlas atlas  495897 May 17 07:56 pilot3.tar.gz
2025-05-17 06:59:38 (20940): Guest Log: -rw-r--r--. 1 atlas atlas    5111 May 17 08:44 queuedata.json
2025-05-17 06:59:38 (20940): Guest Log: -rwx------. 1 atlas atlas   37140 May 17 08:46 runpilot2-wrapper.sh
2025-05-17 06:59:38 (20940): Guest Log: -rwxr-xr-x. 1 atlas atlas   11896 May 17 12:53 init_data.xml
2025-05-17 06:59:38 (20940): Guest Log: -rwxr-xr-x. 1 atlas atlas  508886 May 17 12:53 input.tar.gz
2025-05-17 06:59:38 (20940): Guest Log: -rwxr-xr-x. 1 atlas atlas   17569 May 17 12:53 start_atlas.sh
2025-05-17 06:59:38 (20940): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 May 17 12:53 EVNT.44638096._002121.pool.root.1 -> /data/./ATLAS.root_0
2025-05-17 06:59:38 (20940): Guest Log: -rw-r--r--. 1 atlas atlas    2540 May 17 12:53 pandaJob.out
2025-05-17 06:59:38 (20940): Guest Log: -rw-------. 1 atlas atlas     424 May 17 12:53 setup.sh.local
2025-05-17 06:59:38 (20940): Guest Log: -rw-------. 1 atlas atlas  994651 May 17 12:54 agis_schedconf.cvmfs.json
2025-05-17 06:59:38 (20940): Guest Log: -rw-------. 1 atlas atlas 1596741 May 17 12:54 agis_ddmendpoints.agis.ALL.json
2025-05-17 06:59:38 (20940): Guest Log: drwx------. 4 atlas atlas    4096 May 17 12:54 pilot3
2025-05-17 06:59:38 (20940): Guest Log: -rw-------. 1 atlas atlas     953 May 17 12:57 memory_monitor_summary.json
2025-05-17 06:59:38 (20940): Guest Log: -rw-------. 1 atlas atlas   20528 May 17 12:57 log.44638099._053032.job.log.tgz.1
2025-05-17 06:59:38 (20940): Guest Log: -rw-------. 1 atlas atlas      95 May 17 12:58 pilot_heartbeat.json
2025-05-17 06:59:38 (20940): Guest Log: -rw-------. 1 atlas atlas    8337 May 17 12:59 heartbeat.json
2025-05-17 06:59:38 (20940): Guest Log: -rw-------. 1 atlas atlas    4413 May 17 12:59 pilotlog.txt
2025-05-17 06:59:38 (20940): Guest Log: -rw-------. 1 atlas atlas   80069 May 17 12:59 log.44638099._053032.job.log.1
2025-05-17 06:59:38 (20940): Guest Log: -rw-------. 1 atlas atlas     188 May 17 12:59 output.list
2025-05-17 06:59:38 (20940): Guest Log: -rw-r--r--. 1 atlas atlas     620 May 17 12:59 runtime_log
2025-05-17 06:59:38 (20940): Guest Log: -rw-------. 1 atlas atlas  122880 May 17 12:59 result.tar.gz
2025-05-17 06:59:38 (20940): Guest Log: -rw-r--r--. 1 atlas atlas   10797 May 17 12:59 runtime_log.err
2025-05-17 06:59:38 (20940): Guest Log: -rw-------. 1 atlas atlas     645 May 17 12:59 LRwMDmhMSa7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmT9NKDm22hLWo.diag
2025-05-17 06:59:38 (20940): Guest Log: Looking for outputfile HITS.44638099._053032.pool.root.1
2025-05-17 06:59:38 (20940): Guest Log: No HITS file was produced
2025-05-17 06:59:38 (20940): Guest Log: Successfully finished the ATLAS job!
2025-05-17 06:59:38 (20940): Guest Log: Copying the results back to the shared directory!
2025-05-17 06:59:38 (20940): Guest Log:  *** Contents of shared directory: ***
2025-05-17 06:59:38 (20940): Guest Log: total 218016
2025-05-17 06:59:38 (20940): Guest Log: -rwxrwxrwx. 1 root root 222577653 May 17 12:52 ATLAS.root_0
2025-05-17 06:59:38 (20940): Guest Log: -rwxrwxrwx. 1 root root     11896 May 17 12:52 init_data.xml
2025-05-17 06:59:38 (20940): Guest Log: -rwxrwxrwx. 1 root root    508886 May 17 11:15 input.tar.gz
2025-05-17 06:59:38 (20940): Guest Log: -rwxrwxrwx. 1 root root    122880 May 17 12:59 result.tar.gz
2025-05-17 06:59:38 (20940): Guest Log: -rwxrwxrwx. 1 root root     17569 May 17 11:15 start_atlas.sh
2025-05-17 06:59:38 (20940): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-17 06:59:38 (20940): VM Completion File Detected.
2025-05-17 06:59:38 (20940): Powering off VM.
2025-05-17 06:59:38 (20940): Successfully stopped VM.
2025-05-17 06:59:38 (20940): Deregistering VM. (boinc_cbabc6a90507798a, slot#2)
2025-05-17 06:59:38 (20940): Removing network bandwidth throttle group from VM.
2025-05-17 06:59:39 (20940): Removing VM from VirtualBox.
06:59:44 (20940): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN