Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:18:40 (14294): wrapper (7.7.26015): starting
07:18:40 (14294): wrapper: running run_atlas (--nthreads 12)
[2025-05-17 07:18:40] Arguments: --nthreads 12
[2025-05-17 07:18:40] Threads: 12
[2025-05-17 07:18:40] Checking for CVMFS
[2025-05-17 07:18:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 07:18:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 07:18:40] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 07:18:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 07:18:40] 2.11.2.0 2987 9646 84088 146100 0 55 18939061 20275200 1 130560 0 3988747 99.986 1862932 54156 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-05-17 07:18:40] CVMFS is ok
[2025-05-17 07:18:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-17 07:18:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-17 07:18:40] Further information can be found at the LHC@home message board.
[2025-05-17 07:18:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 07:18:40] Checking for apptainer binary...
[2025-05-17 07:18:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 07:18:40] Running /usr/bin/apptainer --version
[2025-05-17 07:18:40] apptainer version 1.3.2-1.el7
[2025-05-17 07:18:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 07:18:41] c-205-19.aglt2.org
[2025-05-17 07:18:41] apptainer works
[2025-05-17 07:18:41] Set ATHENA_PROC_NUMBER=12
[2025-05-17 07:18:41] Set ATHENA_CORE_NUMBER=12
[2025-05-17 07:18:41] Starting ATLAS job with PandaID=6653397050
[2025-05-17 07:18:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 08:54:28]  *** The last 200 lines of the pilot log: ***
[2025-05-17 08:54:28]  is_altstaged=None
[2025-05-17 08:54:28]  is_tar=False
[2025-05-17 08:54:28]  lfn=log.44638099._052917.job.log.tgz.1
[2025-05-17 08:54:28]  mtime=0
[2025-05-17 08:54:28]  protocol_id=None
[2025-05-17 08:54:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-17 08:54:28]  replicas=None
[2025-05-17 08:54:28]  scope=mc23_13p6TeV
[2025-05-17 08:54:28]  status=None
[2025-05-17 08:54:28]  status_code=0
[2025-05-17 08:54:28]  storage_token=
[2025-05-17 08:54:28]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6653397050/log.44638099._052917.job.log.tgz.1
[2025-05-17 08:54:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ff/21/log.44638099._052917.job.log.tgz.1
[2025-05-17 08:54:28]  workdir=None
[2025-05-17 08:54:28] ]
[2025-05-17 08:54:28] 2025-05-17 12:53:59,015 | INFO     | transferring file log.44638099._052917.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6653397050/log.44638099._052917.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-05-17 08:54:28] 2025-05-17 12:53:59,016 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6653397050/log.44638099._052917.job.log.tgz.1 /tmp/boinchome/slots/0/log.44638099._052917.job
[2025-05-17 08:54:28] 2025-05-17 12:53:59,038 | INFO     | adding to output.list: log.44638099._052917.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ff/21/log.44638099._052917.job.log.tg
[2025-05-17 08:54:28] 2025-05-17 12:53:59,039 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-17 08:54:28] 2025-05-17 12:53:59,039 | INFO     | summary of transferred files:
[2025-05-17 08:54:28] 2025-05-17 12:53:59,039 | INFO     |  -- lfn=log.44638099._052917.job.log.tgz.1, status_code=0, status=transferred
[2025-05-17 08:54:28] 2025-05-17 12:53:59,039 | INFO     | stage-out finished correctly
[2025-05-17 08:54:28] 2025-05-17 12:54:01,219 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-17 08:54:28] 2025-05-17 12:54:04,120 | INFO     | job 6653397050 has state=finished
[2025-05-17 08:54:28] 2025-05-17 12:54:04,120 | INFO     | preparing for final server update for job 6653397050 in state='finished'
[2025-05-17 08:54:28] 2025-05-17 12:54:04,121 | INFO     | this job has now completed (state=finished)
[2025-05-17 08:54:28] 2025-05-17 12:54:04,121 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-17 08:54:28] 2025-05-17 12:54:04,121 | INFO     | log transfer has been attempted: DONE
[2025-05-17 08:54:28] 2025-05-17 12:54:04,121 | INFO     | job 6653397050 has finished - writing final server update
[2025-05-17 08:54:28] 2025-05-17 12:54:04,122 | INFO     | total number of processed events: 400 (read)
[2025-05-17 08:54:28] 2025-05-17 12:54:04,124 | INFO     | executing command: lscpu
[2025-05-17 08:54:28] 2025-05-17 12:54:04,156 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-17 08:54:28] 2025-05-17 12:54:05,134 | WARNING  | process 24506 can no longer be monitored (due to stat problems) - aborting
[2025-05-17 08:54:28] 2025-05-17 12:54:05,134 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6653397050/memory_monitor_summary.json (trf name=prmon)
[2025-05-17 08:54:28] 2025-05-17 12:54:05,227 | INFO     | number of running child processes to parent process 24506: 1
[2025-05-17 08:54:28] 2025-05-17 12:54:05,228 | INFO     | maximum number of monitored processes: 6
[2025-05-17 08:54:28] 2025-05-17 12:54:07,730 | INFO     | monitor loop #424: job 0:6653397050 is in state 'finished'
[2025-05-17 08:54:28] 2025-05-17 12:54:07,730 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 08:54:28] 2025-05-17 12:54:08,799 | INFO     | CPU arch script returned: x86-64-v2
[2025-05-17 08:54:28] 2025-05-17 12:54:08,800 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6653397050/memory_monitor_summary.json (trf name=prmon)
[2025-05-17 08:54:28] 2025-05-17 12:54:08,800 | INFO     | extracted standard info from prmon json
[2025-05-17 08:54:28] 2025-05-17 12:54:08,800 | INFO     | extracted standard memory fields from prmon json
[2025-05-17 08:54:28] 2025-05-17 12:54:08,801 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-17 08:54:28] 2025-05-17 12:54:08,801 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-17 08:54:28] 2025-05-17 12:54:08,801 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-17 08:54:28] 2025-05-17 12:54:08,804 | INFO     | fitting pss+swap vs Time
[2025-05-17 08:54:28] 2025-05-17 12:54:08,804 | INFO     | sum of square deviations: 197203697.5
[2025-05-17 08:54:28] 2025-05-17 12:54:08,805 | INFO     | sum of deviations: 18560852653.000004
[2025-05-17 08:54:28] 2025-05-17 12:54:08,805 | INFO     | mean x: 1747483661.5
[2025-05-17 08:54:28] 2025-05-17 12:54:08,805 | INFO     | mean y: 2715656.6511627906
[2025-05-17 08:54:28] 2025-05-17 12:54:08,805 | INFO     | -- intersect: -164470806725.5873
[2025-05-17 08:54:28] 2025-05-17 12:54:08,805 | INFO     | intersect: -164470806725.5873
[2025-05-17 08:54:28] 2025-05-17 12:54:08,806 | INFO     | chi2: 2.500961288039764
[2025-05-17 08:54:28] 2025-05-17 12:54:08,806 | INFO     | -- intersect: -164470806725.5873
[2025-05-17 08:54:28] 2025-05-17 12:54:08,806 | INFO     | current memory leak: 94.12 B/s (using 86 data points, chi2=2.50)
[2025-05-17 08:54:28] 2025-05-17 12:54:08,807 | INFO     | ..............................
[2025-05-17 08:54:28] 2025-05-17 12:54:08,807 | INFO     | . Timing measurements:
[2025-05-17 08:54:28] 2025-05-17 12:54:08,807 | INFO     | . get job = 0 s
[2025-05-17 08:54:28] 2025-05-17 12:54:08,807 | INFO     | . initial setup = 2 s
[2025-05-17 08:54:28] 2025-05-17 12:54:08,807 | INFO     | . payload setup = 7 s
[2025-05-17 08:54:28] 2025-05-17 12:54:08,807 | INFO     | . stage-in = 0 s
[2025-05-17 08:54:28] 2025-05-17 12:54:08,807 | INFO     | . payload execution = 5676 s
[2025-05-17 08:54:28] 2025-05-17 12:54:08,807 | INFO     | . stage-out = 0 s
[2025-05-17 08:54:28] 2025-05-17 12:54:08,807 | INFO     | . log creation = 0 s
[2025-05-17 08:54:28] 2025-05-17 12:54:08,808 | INFO     | ..............................
[2025-05-17 08:54:28] 2025-05-17 12:54:08,987 | INFO     | 5716s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-05-17 08:54:28] 2025-05-17 12:54:09,126 | INFO     | 
[2025-05-17 08:54:28] 2025-05-17 12:54:09,127 | INFO     | job summary report
[2025-05-17 08:54:28] 2025-05-17 12:54:09,134 | INFO     | --------------------------------------------------
[2025-05-17 08:54:28] 2025-05-17 12:54:09,134 | INFO     | PanDA job id: 6653397050
[2025-05-17 08:54:28] 2025-05-17 12:54:09,134 | INFO     | task id: 44638099
[2025-05-17 08:54:28] 2025-05-17 12:54:09,135 | INFO     | errors: (none)
[2025-05-17 08:54:28] 2025-05-17 12:54:09,135 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 08:54:28] 2025-05-17 12:54:09,135 | INFO     | pilot state: finished 
[2025-05-17 08:54:28] 2025-05-17 12:54:09,135 | INFO     | transexitcode: 0
[2025-05-17 08:54:28] 2025-05-17 12:54:09,135 | INFO     | exeerrorcode: 0
[2025-05-17 08:54:28] 2025-05-17 12:54:09,135 | INFO     | exeerrordiag: 
[2025-05-17 08:54:28] 2025-05-17 12:54:09,135 | INFO     | exitcode: 0
[2025-05-17 08:54:28] 2025-05-17 12:54:09,136 | INFO     | exitmsg: OK
[2025-05-17 08:54:28] 2025-05-17 12:54:09,136 | INFO     | cpuconsumptiontime: 56332 s
[2025-05-17 08:54:28] 2025-05-17 12:54:09,136 | INFO     | nevents: 400
[2025-05-17 08:54:28] 2025-05-17 12:54:09,136 | INFO     | neventsw: 0
[2025-05-17 08:54:28] 2025-05-17 12:54:09,136 | INFO     | pid: 24506
[2025-05-17 08:54:28] 2025-05-17 12:54:09,136 | INFO     | pgrp: 24506
[2025-05-17 08:54:28] 2025-05-17 12:54:09,136 | INFO     | corecount: 12
[2025-05-17 08:54:28] 2025-05-17 12:54:09,136 | INFO     | event service: False
[2025-05-17 08:54:28] 2025-05-17 12:54:09,136 | INFO     | sizes: {0: 2393542, 1: 2393741, 6: 2393947, 11: 2393975, 5687: 2420441, 5688: 2429382, 5690: 2429566, 5698: 2429736}
[2025-05-17 08:54:28] 2025-05-17 12:54:09,137 | INFO     | --------------------------------------------------
[2025-05-17 08:54:28] 2025-05-17 12:54:09,137 | INFO     | 
[2025-05-17 08:54:28] 2025-05-17 12:54:09,137 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-17 08:54:28] 2025-05-17 12:54:09,177 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 08:54:28] 2025-05-17 12:54:09,177 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 08:54:28] 2025-05-17 12:54:09,177 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 08:54:28] 2025-05-17 12:54:09,177 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 08:54:28] 2025-05-17 12:54:09,177 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 08:54:28] 2025-05-17 12:54:09,178 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 08:54:28] 2025-05-17 12:54:09,178 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 08:54:28] 2025-05-17 12:54:09,178 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 08:54:28] 2025-05-17 12:54:09,178 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 08:54:28] 2025-05-17 12:54:09,178 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 08:54:28] 2025-05-17 12:54:09,178 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 08:54:28] 2025-05-17 12:54:09,178 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 08:54:28] 2025-05-17 12:54:09,179 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 08:54:28] 2025-05-17 12:54:09,179 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 08:54:28] 2025-05-17 12:54:09,179 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 08:54:28] 2025-05-17 12:54:09,179 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 08:54:28] 2025-05-17 12:54:09,179 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 08:54:28] 2025-05-17 12:54:09,179 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 08:54:28] 2025-05-17 12:54:09,179 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 08:54:28] 2025-05-17 12:54:09,179 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 08:54:28] 2025-05-17 12:54:09,179 | INFO     | job 6653397050 has completed (purged errors)
[2025-05-17 08:54:28] 2025-05-17 12:54:09,180 | INFO     | overall cleanup function is called
[2025-05-17 08:54:28] 2025-05-17 12:54:10,187 | INFO     | --- collectZombieJob: --- 10, [24506]
[2025-05-17 08:54:28] 2025-05-17 12:54:10,187 | INFO     | zombie collector waiting for pid 24506
[2025-05-17 08:54:28] 2025-05-17 12:54:10,187 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 08:54:28] 2025-05-17 12:54:10,188 | INFO     | collected zombie processes
[2025-05-17 08:54:28] 2025-05-17 12:54:10,188 | INFO     | will attempt to kill all subprocesses of pid=24506
[2025-05-17 08:54:28] 2025-05-17 12:54:10,283 | INFO     | process IDs to be killed: [24506] (in reverse order)
[2025-05-17 08:54:28] 2025-05-17 12:54:10,336 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 08:54:28] 2025-05-17 12:54:10,336 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 08:54:28] 2025-05-17 12:54:10,340 | INFO     | did not find any defunct processes belonging to 24506
[2025-05-17 08:54:28] 2025-05-17 12:54:10,343 | INFO     | did not find any defunct processes belonging to 24506
[2025-05-17 08:54:28] 2025-05-17 12:54:10,343 | INFO     | ready for new job
[2025-05-17 08:54:28] 2025-05-17 12:54:10,343 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 08:54:28] 2025-05-17 12:54:10,345 | INFO     | **************************************
[2025-05-17 08:54:28] 2025-05-17 12:54:10,345 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 08:54:28] 2025-05-17 12:54:10,345 | INFO     | **************************************
[2025-05-17 08:54:28] 2025-05-17 12:54:10,345 | INFO     | 
[2025-05-17 08:54:28] 2025-05-17 12:54:10,346 | INFO     | architecture information:
[2025-05-17 08:54:28] 2025-05-17 12:54:10,347 | INFO     | executing command: cat /etc/os-release
[2025-05-17 08:54:28] 2025-05-17 12:54:10,362 | INFO     | cat /etc/os-release:
[2025-05-17 08:54:28] NAME="CentOS Linux"
[2025-05-17 08:54:28] VERSION="7 (Core)"
[2025-05-17 08:54:28] ID="centos"
[2025-05-17 08:54:28] ID_LIKE="rhel fedora"
[2025-05-17 08:54:28] VERSION_ID="7"
[2025-05-17 08:54:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 08:54:28] ANSI_COLOR="0;31"
[2025-05-17 08:54:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 08:54:28] HOME_URL="https://www.centos.org/"
[2025-05-17 08:54:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 08:54:28] 
[2025-05-17 08:54:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 08:54:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 08:54:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 08:54:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 08:54:28] 
[2025-05-17 08:54:28] 2025-05-17 12:54:10,362 | INFO     | **************************************
[2025-05-17 08:54:28] 2025-05-17 12:54:10,865 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-17 08:54:28] 2025-05-17 12:54:10,882 | INFO     | sufficient remaining disk space (29399973888 B)
[2025-05-17 08:54:28] 2025-05-17 12:54:10,883 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 08:54:28] 2025-05-17 12:54:10,883 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 08:54:28] 2025-05-17 12:54:10,883 | INFO     | update_server=False
[2025-05-17 08:54:28] 2025-05-17 12:54:10,883 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 08:54:28] 2025-05-17 12:54:10,884 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 08:54:28] 2025-05-17 12:54:10,884 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-17 08:54:28] 2025-05-17 12:54:10,884 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 08:54:28] 2025-05-17 12:54:10,885 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 08:54:28] 2025-05-17 12:54:10,885 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 08:54:28] 2025-05-17 12:54:11,005 | INFO     | all job control threads have been joined
[2025-05-17 08:54:28] 2025-05-17 12:54:11,238 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 08:54:28] 2025-05-17 12:54:11,239 | INFO     | aborting loop
[2025-05-17 08:54:28] 2025-05-17 12:54:11,676 | INFO     | all data control threads have been joined
[2025-05-17 08:54:28] 2025-05-17 12:54:11,685 | INFO     | all payload control threads have been joined
[2025-05-17 08:54:28] 2025-05-17 12:54:11,810 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 08:54:28] 2025-05-17 12:54:11,889 | INFO     | [job] retrieve thread has finished
[2025-05-17 08:54:28] 2025-05-17 12:54:11,889 | INFO     | [job] queue monitor thread has finished
[2025-05-17 08:54:28] 2025-05-17 12:54:12,011 | INFO     | [job] control thread has finished
[2025-05-17 08:54:28] 2025-05-17 12:54:12,112 | INFO     | [payload] validate_post thread has finished
[2025-05-17 08:54:28] 2025-05-17 12:54:12,116 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 08:54:28] 2025-05-17 12:54:12,138 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 08:54:28] 2025-05-17 12:54:12,213 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 08:54:28] 2025-05-17 12:54:12,244 | INFO     | [job] job monitor thread has finished
[2025-05-17 08:54:28] 2025-05-17 12:54:12,681 | INFO     | [data] control thread has finished
[2025-05-17 08:54:28] 2025-05-17 12:54:12,686 | INFO     | [data] copytool_in thread has finished
[2025-05-17 08:54:28] 2025-05-17 12:54:12,690 | INFO     | [payload] control thread has finished
[2025-05-17 08:54:28] 2025-05-17 12:54:12,731 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 08:54:28] 2025-05-17 12:54:13,117 | INFO     | [payload] failed_post thread has finished
[2025-05-17 08:54:28] 2025-05-17 12:54:13,367 | INFO     | [job] validate thread has finished
[2025-05-17 08:54:28] 2025-05-17 12:54:14,143 | INFO     | [data] copytool_out thread has finished
[2025-05-17 08:54:28] 2025-05-17 12:54:15,816 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 08:54:28] 2025-05-17 12:54:21,854 | INFO     | job.realtimelogging is not enabled
[2025-05-17 08:54:28] 2025-05-17 12:54:22,859 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 08:54:28] 2025-05-17 12:54:23,562 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140150584616768)>', '<ExcThread(monitor, started 140150017357568)>']
[2025-05-17 08:54:28] 2025-05-17 12:54:23,946 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 08:54:28] 2025-05-17 12:54:23,946 | INFO     | [monitor] control thread has ended
[2025-05-17 08:54:28] 2025-05-17 12:54:28,581 | INFO     | all workflow threads have been joined
[2025-05-17 08:54:28] 2025-05-17 12:54:28,581 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 08:54:28] 2025-05-17 12:54:28,581 | INFO     | traces error code: 0
[2025-05-17 08:54:28] 2025-05-17 12:54:28,582 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 08:54:28] 2025-05-17 12:54:28,675 [wrapper] ==== pilot stdout END ====
[2025-05-17 08:54:28] 2025-05-17 12:54:28,679 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 08:54:28] 2025-05-17 12:54:28,683 [wrapper] pilotpid: 18084
[2025-05-17 08:54:28] 2025-05-17 12:54:28,686 [wrapper] Pilot exit status: 0
[2025-05-17 08:54:28] 2025-05-17 12:54:28,701 [wrapper] pandaids: 6653397050
[2025-05-17 08:54:28] 2025-05-17 12:54:28,740 [wrapper] cleanup supervisor_pilot 22876 18085
[2025-05-17 08:54:28] 2025-05-17 12:54:28,744 [wrapper] Test setup, not cleaning
[2025-05-17 08:54:28] 2025-05-17 12:54:28,748 [wrapper] apfmon messages muted
[2025-05-17 08:54:28] 2025-05-17 12:54:28,752 [wrapper] ==== wrapper stdout END ====
[2025-05-17 08:54:28] 2025-05-17 12:54:28,756 [wrapper] ==== wrapper stderr END ====
[2025-05-17 08:54:28]  *** Error codes and diagnostics ***
[2025-05-17 08:54:28]     "exeErrorCode": 0,
[2025-05-17 08:54:28]     "exeErrorDiag": "",
[2025-05-17 08:54:28]     "pilotErrorCode": 0,
[2025-05-17 08:54:28]     "pilotErrorDiag": "",
[2025-05-17 08:54:28]  *** Listing of results directory ***
[2025-05-17 08:54:28] total 410780
[2025-05-17 08:54:28] -rw-r--r-- 1 boincer umatlas    495897 May 17 03:56 pilot3.tar.gz
[2025-05-17 08:54:28] -rwx------ 1 boincer umatlas     37140 May 17 04:38 runpilot2-wrapper.sh
[2025-05-17 08:54:28] -rw-r--r-- 1 boincer umatlas      5111 May 17 04:38 queuedata.json
[2025-05-17 08:54:28] -rw-r--r-- 1 boincer umatlas       100 May 17 07:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 08:54:28] -rwxr-xr-x 1 boincer umatlas      7986 May 17 07:18 run_atlas
[2025-05-17 08:54:28] -rw-r--r-- 1 boincer umatlas       105 May 17 07:18 job.xml
[2025-05-17 08:54:28] -rw-r--r-- 2 boincer umatlas 219032169 May 17 07:18 EVNT.44638096._002116.pool.root.1
[2025-05-17 08:54:28] -rw-r--r-- 2 boincer umatlas     17569 May 17 07:18 start_atlas.sh
[2025-05-17 08:54:28] drwxrwx--x 2 boincer umatlas      4096 May 17 07:18 shared
[2025-05-17 08:54:28] -rw-r--r-- 2 boincer umatlas    508880 May 17 07:18 input.tar.gz
[2025-05-17 08:54:28] -rw-r--r-- 1 boincer umatlas         0 May 17 07:18 boinc_lockfile
[2025-05-17 08:54:28] -rw-r--r-- 1 boincer umatlas      2540 May 17 07:18 pandaJob.out
[2025-05-17 08:54:28] -rw------- 1 boincer umatlas       424 May 17 07:18 setup.sh.local
[2025-05-17 08:54:28] -rw------- 1 boincer umatlas    994635 May 17 07:18 agis_schedconf.cvmfs.json
[2025-05-17 08:54:28] -rw------- 1 boincer umatlas   1596741 May 17 07:18 agis_ddmendpoints.agis.ALL.json
[2025-05-17 08:54:28] drwx------ 4 boincer umatlas      4096 May 17 07:18 pilot3
[2025-05-17 08:54:28] -rw-r--r-- 1 boincer umatlas      5868 May 17 08:48 init_data.xml
[2025-05-17 08:54:28] -rw------- 1 boincer umatlas 195940760 May 17 08:53 HITS.44638099._052917.pool.root.1
[2025-05-17 08:54:28] -rw-r--r-- 1 boincer umatlas       529 May 17 08:53 boinc_task_state.xml
[2025-05-17 08:54:28] -rw------- 1 boincer umatlas      1046 May 17 08:53 memory_monitor_summary.json
[2025-05-17 08:54:28] -rw------- 1 boincer umatlas    374533 May 17 08:53 log.44638099._052917.job.log.tgz.1
[2025-05-17 08:54:28] -rw------- 1 boincer umatlas        95 May 17 08:54 pilot_heartbeat.json
[2025-05-17 08:54:28] -rw------- 1 boincer umatlas      7747 May 17 08:54 heartbeat.json
[2025-05-17 08:54:28] -rw-r--r-- 1 boincer umatlas        27 May 17 08:54 wrapper_checkpoint.txt
[2025-05-17 08:54:28] -rw-r--r-- 1 boincer umatlas      8192 May 17 08:54 boinc_mmap_file
[2025-05-17 08:54:28] -rw------- 1 boincer umatlas      4548 May 17 08:54 pilotlog.txt
[2025-05-17 08:54:28] -rw------- 1 boincer umatlas    534481 May 17 08:54 log.44638099._052917.job.log.1
[2025-05-17 08:54:28] -rw------- 1 boincer umatlas       357 May 17 08:54 output.list
[2025-05-17 08:54:28] -rw-r--r-- 1 boincer umatlas       620 May 17 08:54 runtime_log
[2025-05-17 08:54:28] -rw------- 1 boincer umatlas    931840 May 17 08:54 result.tar.gz
[2025-05-17 08:54:28] -rw-r--r-- 1 boincer umatlas     11015 May 17 08:54 runtime_log.err
[2025-05-17 08:54:28] -rw------- 1 boincer umatlas       658 May 17 08:54 3QWKDm8ESa7n9Rq4apOajLDm4fhM0noT9bVof3QYDm9FKKDmcVrN3m.diag
[2025-05-17 08:54:28] -rw-r--r-- 1 boincer umatlas     21407 May 17 08:54 stderr.txt
[2025-05-17 08:54:28] HITS file was successfully produced:
[2025-05-17 08:54:28] -rw------- 1 boincer umatlas 195940760 May 17 08:53 shared/HITS.pool.root.1
[2025-05-17 08:54:28]  *** Contents of shared directory: ***
[2025-05-17 08:54:28] total 406688
[2025-05-17 08:54:28] -rw-r--r-- 2 boincer umatlas 219032169 May 17 07:18 ATLAS.root_0
[2025-05-17 08:54:28] -rw-r--r-- 2 boincer umatlas     17569 May 17 07:18 start_atlas.sh
[2025-05-17 08:54:28] -rw-r--r-- 2 boincer umatlas    508880 May 17 07:18 input.tar.gz
[2025-05-17 08:54:28] -rw------- 1 boincer umatlas 195940760 May 17 08:53 HITS.pool.root.1
[2025-05-17 08:54:28] -rw------- 1 boincer umatlas    931840 May 17 08:54 result.tar.gz
08:54:30 (14294): run_atlas exited; CPU time 56353.631208
08:54:30 (14294): called boinc_finish(0)

</stderr_txt>
]]>

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