Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:10:25 (780422): wrapper (7.7.26015): starting
07:10:25 (780422): wrapper: running run_atlas (--nthreads 8)
[2025-05-17 07:10:25] Arguments: --nthreads 8
[2025-05-17 07:10:25] Threads: 8
[2025-05-17 07:10:25] Checking for CVMFS
[2025-05-17 07:10:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 07:10:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 07:10:25] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 07:10:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 07:10:26] 2.12.6.0 11692 5343 190208 146099 0 291 34370163 40960000 40856 16776704 0 54270599 99.714 46586411 40647 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-17 07:10:26] CVMFS is ok
[2025-05-17 07:10:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-17 07:10:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-17 07:10:26] Further information can be found at the LHC@home message board.
[2025-05-17 07:10:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 07:10:26] Checking for apptainer binary...
[2025-05-17 07:10:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 07:10:26] Running /usr/bin/apptainer --version
[2025-05-17 07:10:26] apptainer version 1.4.0-1.el9
[2025-05-17 07:10:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 07:10:26] c8-7-3.aglt2.org
[2025-05-17 07:10:26] apptainer works
[2025-05-17 07:10:26] Set ATHENA_PROC_NUMBER=8
[2025-05-17 07:10:26] Set ATHENA_CORE_NUMBER=8
[2025-05-17 07:10:26] Starting ATLAS job with PandaID=6653396927
[2025-05-17 07:10:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
08:41:08 (3052820): wrapper (7.7.26015): starting
08:41:08 (3052820): wrapper: running run_atlas (--nthreads 8)
[2025-05-17 08:41:08] Arguments: --nthreads 8
[2025-05-17 08:41:08] Threads: 8
[2025-05-17 08:41:08] This job has been restarted, cleaning up previous attempt
[2025-05-17 08:41:08] Checking for CVMFS
[2025-05-17 08:41:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 08:41:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 08:41:08] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 08:41:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 08:41:08] 2.12.6.0 11692 5434 211944 146101 2 581 34547335 40960001 35843 16776704 0 56245554 99.723 46589922 40634 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-17 08:41:08] CVMFS is ok
[2025-05-17 08:41:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-17 08:41:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-17 08:41:08] Further information can be found at the LHC@home message board.
[2025-05-17 08:41:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 08:41:08] Checking for apptainer binary...
[2025-05-17 08:41:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 08:41:08] Running /usr/bin/apptainer --version
[2025-05-17 08:41:08] apptainer version 1.4.0-1.el9
[2025-05-17 08:41:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 08:41:08] c8-7-3.aglt2.org
[2025-05-17 08:41:08] apptainer works
[2025-05-17 08:41:08] Set ATHENA_PROC_NUMBER=8
[2025-05-17 08:41:08] Set ATHENA_CORE_NUMBER=8
[2025-05-17 08:41:08] Starting ATLAS job with PandaID=6653396927
[2025-05-17 08:41:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 11:32:46]  *** The last 200 lines of the pilot log: ***
[2025-05-17 11:32:46] 2025-05-17 15:32:25,252 | INFO     | mean x: 1747490647.1104295
[2025-05-17 11:32:46] 2025-05-17 15:32:25,252 | INFO     | mean y: 2050043.4969325154
[2025-05-17 11:32:46] 2025-05-17 15:32:25,252 | INFO     | -- intersect: -111118112329.57396
[2025-05-17 11:32:46] 2025-05-17 15:32:25,252 | INFO     | intersect: -111118112329.57396
[2025-05-17 11:32:46] 2025-05-17 15:32:25,252 | INFO     | chi2: 4.612719705653963
[2025-05-17 11:32:46] 2025-05-17 15:32:25,252 | INFO     | current chi2=4.612719705653963 (change=0.234519258461442 %)
[2025-05-17 11:32:46] 2025-05-17 15:32:25,252 | INFO     | right removable region: 162
[2025-05-17 11:32:46] 2025-05-17 15:32:25,252 | INFO     | sum of square deviations: 1342896120.0122643
[2025-05-17 11:32:46] 2025-05-17 15:32:25,253 | INFO     | sum of deviations: 52898004963.28223
[2025-05-17 11:32:46] 2025-05-17 15:32:25,253 | INFO     | mean x: 1747490952.1104295
[2025-05-17 11:32:46] 2025-05-17 15:32:25,253 | INFO     | mean y: 2097083.5398773006
[2025-05-17 11:32:46] 2025-05-17 15:32:25,253 | INFO     | -- intersect: -68833298060.19177
[2025-05-17 11:32:46] 2025-05-17 15:32:25,268 | INFO     | intersect: -68833298060.19177
[2025-05-17 11:32:46] 2025-05-17 15:32:25,269 | INFO     | chi2: 2.0751437459654998
[2025-05-17 11:32:46] 2025-05-17 15:32:25,269 | INFO     | current chi2=2.0751437459654998 (change=55.118080734390915 %)
[2025-05-17 11:32:46] 2025-05-17 15:32:25,269 | INFO     | sum of square deviations: 1223065127.4493663
[2025-05-17 11:32:46] 2025-05-17 15:32:25,269 | INFO     | sum of deviations: 25157964737.79747
[2025-05-17 11:32:46] 2025-05-17 15:32:25,269 | INFO     | mean x: 1747491104.613924
[2025-05-17 11:32:46] 2025-05-17 15:32:25,269 | INFO     | mean y: 2132398.4556962023
[2025-05-17 11:32:46] 2025-05-17 15:32:25,269 | INFO     | -- intersect: -35943066759.6422
[2025-05-17 11:32:46] 2025-05-17 15:32:25,269 | INFO     | intersect: -35943066759.6422
[2025-05-17 11:32:46] 2025-05-17 15:32:25,270 | INFO     | chi2: 0.6951782346137111
[2025-05-17 11:32:46] 2025-05-17 15:32:25,270 | INFO     | current chi2=0.6951782346137111 (change=66.49975521140266 %)
[2025-05-17 11:32:46] 2025-05-17 15:32:25,270 | INFO     | sum of square deviations: 1110583109.8823586
[2025-05-17 11:32:46] 2025-05-17 15:32:25,270 | INFO     | sum of deviations: 8171707501.235294
[2025-05-17 11:32:46] 2025-05-17 15:32:25,296 | INFO     | mean x: 1747491257.1176472
[2025-05-17 11:32:46] 2025-05-17 15:32:25,297 | INFO     | mean y: 2155274.7647058824
[2025-05-17 11:32:46] 2025-05-17 15:32:25,297 | INFO     | -- intersect: -12855943580.74915
[2025-05-17 11:32:46] 2025-05-17 15:32:25,297 | INFO     | intersect: -12855943580.74915
[2025-05-17 11:32:46] 2025-05-17 15:32:25,297 | INFO     | chi2: 0.08043597818331659
[2025-05-17 11:32:46] 2025-05-17 15:32:25,297 | INFO     | current chi2=0.08043597818331659 (change=88.42944525902593 %)
[2025-05-17 11:32:46] 2025-05-17 15:32:25,297 | INFO     | sum of square deviations: 1005217504.8108102
[2025-05-17 11:32:46] 2025-05-17 15:32:25,297 | INFO     | sum of deviations: 4947890721.513514
[2025-05-17 11:32:46] 2025-05-17 15:32:25,297 | INFO     | mean x: 1747491409.6216216
[2025-05-17 11:32:46] 2025-05-17 15:32:25,297 | INFO     | mean y: 2159854.527027027
[2025-05-17 11:32:46] 2025-05-17 15:32:25,297 | INFO     | -- intersect: -8599358215.155525
[2025-05-17 11:32:46] 2025-05-17 15:32:25,297 | INFO     | intersect: -8599358215.155525
[2025-05-17 11:32:46] 2025-05-17 15:32:25,298 | INFO     | chi2: 0.04321242076859613
[2025-05-17 11:32:46] 2025-05-17 15:32:25,298 | INFO     | current chi2=0.04321242076859613 (change=46.27724838490381 %)
[2025-05-17 11:32:46] 2025-05-17 15:32:25,298 | INFO     | sum of square deviations: 906735749.7342653
[2025-05-17 11:32:46] 2025-05-17 15:32:25,298 | INFO     | sum of deviations: 4992308358.993008
[2025-05-17 11:32:46] 2025-05-17 15:32:25,298 | INFO     | mean x: 1747491562.125874
[2025-05-17 11:32:46] 2025-05-17 15:32:25,298 | INFO     | mean y: 2159763.055944056
[2025-05-17 11:32:46] 2025-05-17 15:32:25,298 | INFO     | -- intersect: -9619184421.760277
[2025-05-17 11:32:46] 2025-05-17 15:32:25,298 | INFO     | intersect: -9619184421.760277
[2025-05-17 11:32:46] 2025-05-17 15:32:25,298 | INFO     | chi2: 0.040003030442393166
[2025-05-17 11:32:46] 2025-05-17 15:32:25,298 | INFO     | current chi2=0.040003030442393166 (change=7.427008876427804 %)
[2025-05-17 11:32:46] 2025-05-17 15:32:25,298 | INFO     | left removable region: 50
[2025-05-17 11:32:46] 2025-05-17 15:32:25,299 | INFO     | sum of square deviations: 435621403.1071427
[2025-05-17 11:32:46] 2025-05-17 15:32:25,299 | INFO     | sum of deviations: 509065660.57142854
[2025-05-17 11:32:46] 2025-05-17 15:32:25,299 | INFO     | mean x: 1747492141.6607144
[2025-05-17 11:32:46] 2025-05-17 15:32:25,299 | INFO     | mean y: 2166533.8571428573
[2025-05-17 11:32:46] 2025-05-17 15:32:25,299 | INFO     | -- intersect: -2039946721.122421
[2025-05-17 11:32:46] 2025-05-17 15:32:25,299 | INFO     | intersect: -2039946721.122421
[2025-05-17 11:32:46] 2025-05-17 15:32:25,299 | INFO     | chi2: 0.018034545447156936
[2025-05-17 11:32:46] 2025-05-17 15:32:25,299 | INFO     | -- intersect: -2039946721.122421
[2025-05-17 11:32:46] 2025-05-17 15:32:25,299 | INFO     | current memory leak: 1.17 B/s (using 112 data points, chi2=0.02)
[2025-05-17 11:32:46] 2025-05-17 15:32:25,300 | INFO     | ..............................
[2025-05-17 11:32:46] 2025-05-17 15:32:25,300 | INFO     | . Timing measurements:
[2025-05-17 11:32:46] 2025-05-17 15:32:25,300 | INFO     | . get job = 0 s
[2025-05-17 11:32:46] 2025-05-17 15:32:25,300 | INFO     | . initial setup = 0 s
[2025-05-17 11:32:46] 2025-05-17 15:32:25,300 | INFO     | . payload setup = 6 s
[2025-05-17 11:32:46] 2025-05-17 15:32:25,300 | INFO     | . stage-in = 0 s
[2025-05-17 11:32:46] 2025-05-17 15:32:25,300 | INFO     | . payload execution = 10218 s
[2025-05-17 11:32:46] 2025-05-17 15:32:25,300 | INFO     | . stage-out = 2 s
[2025-05-17 11:32:46] 2025-05-17 15:32:25,300 | INFO     | . log creation = 0 s
[2025-05-17 11:32:46] 2025-05-17 15:32:25,300 | INFO     | ..............................
[2025-05-17 11:32:46] 2025-05-17 15:32:25,666 | INFO     | 
[2025-05-17 11:32:46] 2025-05-17 15:32:25,667 | INFO     | job summary report
[2025-05-17 11:32:46] 2025-05-17 15:32:25,667 | INFO     | --------------------------------------------------
[2025-05-17 11:32:46] 2025-05-17 15:32:25,667 | INFO     | PanDA job id: 6653396927
[2025-05-17 11:32:46] 2025-05-17 15:32:25,667 | INFO     | task id: 44638099
[2025-05-17 11:32:46] 2025-05-17 15:32:25,667 | INFO     | errors: (none)
[2025-05-17 11:32:46] 2025-05-17 15:32:25,667 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 11:32:46] 2025-05-17 15:32:25,667 | INFO     | pilot state: finished 
[2025-05-17 11:32:46] 2025-05-17 15:32:25,667 | INFO     | transexitcode: 0
[2025-05-17 11:32:46] 2025-05-17 15:32:25,667 | INFO     | exeerrorcode: 0
[2025-05-17 11:32:46] 2025-05-17 15:32:25,667 | INFO     | exeerrordiag: 
[2025-05-17 11:32:46] 2025-05-17 15:32:25,667 | INFO     | exitcode: 0
[2025-05-17 11:32:46] 2025-05-17 15:32:25,667 | INFO     | exitmsg: OK
[2025-05-17 11:32:46] 2025-05-17 15:32:25,667 | INFO     | cpuconsumptiontime: 28739 s
[2025-05-17 11:32:46] 2025-05-17 15:32:25,667 | INFO     | nevents: 400
[2025-05-17 11:32:46] 2025-05-17 15:32:25,667 | INFO     | neventsw: 0
[2025-05-17 11:32:46] 2025-05-17 15:32:25,667 | INFO     | pid: 3141557
[2025-05-17 11:32:46] 2025-05-17 15:32:25,667 | INFO     | pgrp: 3141557
[2025-05-17 11:32:46] 2025-05-17 15:32:25,667 | INFO     | corecount: 8
[2025-05-17 11:32:46] 2025-05-17 15:32:25,667 | INFO     | event service: False
[2025-05-17 11:32:46] 2025-05-17 15:32:25,667 | INFO     | sizes: {0: 2393598, 1: 2393740, 5: 2393946, 11: 2394002, 10228: 2422426, 10229: 2422425, 10232: 2431550, 10234: 2431606, 10252: 2431776}
[2025-05-17 11:32:46] 2025-05-17 15:32:25,667 | INFO     | --------------------------------------------------
[2025-05-17 11:32:46] 2025-05-17 15:32:25,667 | INFO     | 
[2025-05-17 11:32:46] 2025-05-17 15:32:25,667 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-05-17 11:32:46] 2025-05-17 15:32:25,858 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 11:32:46] 2025-05-17 15:32:25,858 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 11:32:46] 2025-05-17 15:32:25,858 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 11:32:46] 2025-05-17 15:32:25,858 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 11:32:46] 2025-05-17 15:32:25,858 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 11:32:46] 2025-05-17 15:32:25,858 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 11:32:46] 2025-05-17 15:32:25,858 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 11:32:46] 2025-05-17 15:32:25,858 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 11:32:46] 2025-05-17 15:32:25,858 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 11:32:46] 2025-05-17 15:32:25,858 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 11:32:46] 2025-05-17 15:32:25,858 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 11:32:46] 2025-05-17 15:32:25,858 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 11:32:46] 2025-05-17 15:32:25,858 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 11:32:46] 2025-05-17 15:32:25,858 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 11:32:46] 2025-05-17 15:32:25,858 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 11:32:46] 2025-05-17 15:32:25,858 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 11:32:46] 2025-05-17 15:32:25,858 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 11:32:46] 2025-05-17 15:32:25,859 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 11:32:46] 2025-05-17 15:32:25,859 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 11:32:46] 2025-05-17 15:32:25,859 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 11:32:46] 2025-05-17 15:32:25,859 | INFO     | job 6653396927 has completed (purged errors)
[2025-05-17 11:32:46] 2025-05-17 15:32:25,859 | INFO     | overall cleanup function is called
[2025-05-17 11:32:46] 2025-05-17 15:32:26,879 | INFO     | --- collectZombieJob: --- 10, [3141557]
[2025-05-17 11:32:46] 2025-05-17 15:32:26,879 | INFO     | zombie collector waiting for pid 3141557
[2025-05-17 11:32:46] 2025-05-17 15:32:26,879 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 11:32:46] 2025-05-17 15:32:26,879 | INFO     | collected zombie processes
[2025-05-17 11:32:46] 2025-05-17 15:32:26,879 | INFO     | will attempt to kill all subprocesses of pid=3141557
[2025-05-17 11:32:46] 2025-05-17 15:32:27,455 | INFO     | process IDs to be killed: [3141557] (in reverse order)
[2025-05-17 11:32:46] 2025-05-17 15:32:27,671 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 11:32:46] 2025-05-17 15:32:27,671 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 11:32:46] 2025-05-17 15:32:27,701 | INFO     | did not find any defunct processes belonging to 3141557
[2025-05-17 11:32:46] 2025-05-17 15:32:27,731 | INFO     | did not find any defunct processes belonging to 3141557
[2025-05-17 11:32:46] 2025-05-17 15:32:27,731 | INFO     | ready for new job
[2025-05-17 11:32:46] 2025-05-17 15:32:27,731 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 11:32:46] 2025-05-17 15:32:27,734 | INFO     | **************************************
[2025-05-17 11:32:46] 2025-05-17 15:32:27,734 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 11:32:46] 2025-05-17 15:32:27,734 | INFO     | **************************************
[2025-05-17 11:32:46] 2025-05-17 15:32:27,734 | INFO     | 
[2025-05-17 11:32:46] 2025-05-17 15:32:27,743 | INFO     | architecture information:
[2025-05-17 11:32:46] 2025-05-17 15:32:27,743 | INFO     | executing command: cat /etc/os-release
[2025-05-17 11:32:46] 2025-05-17 15:32:27,782 | INFO     | cat /etc/os-release:
[2025-05-17 11:32:46] NAME="CentOS Linux"
[2025-05-17 11:32:46] VERSION="7 (Core)"
[2025-05-17 11:32:46] ID="centos"
[2025-05-17 11:32:46] ID_LIKE="rhel fedora"
[2025-05-17 11:32:46] VERSION_ID="7"
[2025-05-17 11:32:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 11:32:46] ANSI_COLOR="0;31"
[2025-05-17 11:32:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 11:32:46] HOME_URL="https://www.centos.org/"
[2025-05-17 11:32:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 11:32:46] 
[2025-05-17 11:32:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 11:32:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 11:32:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 11:32:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 11:32:46] 
[2025-05-17 11:32:46] 2025-05-17 15:32:27,782 | INFO     | **************************************
[2025-05-17 11:32:46] 2025-05-17 15:32:28,285 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-05-17 11:32:46] 2025-05-17 15:32:28,308 | INFO     | sufficient remaining disk space (168667643904 B)
[2025-05-17 11:32:46] 2025-05-17 15:32:28,308 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 11:32:46] 2025-05-17 15:32:28,309 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 11:32:46] 2025-05-17 15:32:28,309 | INFO     | update_server=False
[2025-05-17 11:32:46] 2025-05-17 15:32:28,309 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 11:32:46] 2025-05-17 15:32:28,383 | INFO     | all data control threads have been joined
[2025-05-17 11:32:46] 2025-05-17 15:32:28,528 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 11:32:46] 2025-05-17 15:32:28,529 | INFO     | aborting loop
[2025-05-17 11:32:46] 2025-05-17 15:32:28,787 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 11:32:46] 2025-05-17 15:32:28,998 | INFO     | all payload control threads have been joined
[2025-05-17 11:32:46] 2025-05-17 15:32:29,018 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 11:32:46] 2025-05-17 15:32:29,019 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 11:32:46] 2025-05-17 15:32:29,019 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 11:32:46] 2025-05-17 15:32:29,214 | INFO     | all job control threads have been joined
[2025-05-17 11:32:46] 2025-05-17 15:32:29,318 | INFO     | [job] retrieve thread has finished
[2025-05-17 11:32:46] 2025-05-17 15:32:29,364 | INFO     | [payload] validate_post thread has finished
[2025-05-17 11:32:46] 2025-05-17 15:32:29,389 | INFO     | [data] control thread has finished
[2025-05-17 11:32:46] 2025-05-17 15:32:29,438 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 11:32:46] 2025-05-17 15:32:29,507 | INFO     | [payload] failed_post thread has finished
[2025-05-17 11:32:46] 2025-05-17 15:32:29,534 | INFO     | [job] job monitor thread has finished
[2025-05-17 11:32:46] 2025-05-17 15:32:29,618 | INFO     | [data] copytool_in thread has finished
[2025-05-17 11:32:46] 2025-05-17 15:32:29,762 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 11:32:46] 2025-05-17 15:32:30,006 | INFO     | [payload] control thread has finished
[2025-05-17 11:32:46] 2025-05-17 15:32:30,220 | INFO     | [job] control thread has finished
[2025-05-17 11:32:46] 2025-05-17 15:32:30,346 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 11:32:46] 2025-05-17 15:32:30,603 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 11:32:46] 2025-05-17 15:32:30,680 | INFO     | [job] validate thread has finished
[2025-05-17 11:32:46] 2025-05-17 15:32:30,793 | INFO     | [data] copytool_out thread has finished
[2025-05-17 11:32:46] 2025-05-17 15:32:31,608 | INFO     | [job] queue monitor thread has finished
[2025-05-17 11:32:46] 2025-05-17 15:32:31,687 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 11:32:46] 2025-05-17 15:32:35,695 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 11:32:46] 2025-05-17 15:32:38,952 | INFO     | job.realtimelogging is not enabled
[2025-05-17 11:32:46] 2025-05-17 15:32:39,958 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 11:32:46] 2025-05-17 15:32:41,118 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140691992287040)>', '<ExcThread(monitor, started 140691367778048)>']
[2025-05-17 11:32:46] 2025-05-17 15:32:42,103 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 11:32:46] 2025-05-17 15:32:42,103 | INFO     | [monitor] control thread has ended
[2025-05-17 11:32:46] 2025-05-17 15:32:46,143 | INFO     | all workflow threads have been joined
[2025-05-17 11:32:46] 2025-05-17 15:32:46,144 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 11:32:46] 2025-05-17 15:32:46,144 | INFO     | traces error code: 0
[2025-05-17 11:32:46] 2025-05-17 15:32:46,144 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 11:32:46] 2025-05-17 15:32:46,254 [wrapper] ==== pilot stdout END ====
[2025-05-17 11:32:46] 2025-05-17 15:32:46,256 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 11:32:46] 2025-05-17 15:32:46,259 [wrapper] pilotpid: 3084646
[2025-05-17 11:32:46] 2025-05-17 15:32:46,261 [wrapper] Pilot exit status: 0
[2025-05-17 11:32:46] 2025-05-17 15:32:46,272 [wrapper] pandaids: 6653396927 6653396927
[2025-05-17 11:32:46] 2025-05-17 15:32:46,420 [wrapper] cleanup supervisor_pilot 1862015 3084647
[2025-05-17 11:32:46] 2025-05-17 15:32:46,426 [wrapper] Test setup, not cleaning
[2025-05-17 11:32:46] 2025-05-17 15:32:46,429 [wrapper] apfmon messages muted
[2025-05-17 11:32:46] 2025-05-17 15:32:46,433 [wrapper] ==== wrapper stdout END ====
[2025-05-17 11:32:46] 2025-05-17 15:32:46,438 [wrapper] ==== wrapper stderr END ====
[2025-05-17 11:32:46]  *** Error codes and diagnostics ***
[2025-05-17 11:32:46]     "exeErrorCode": 0,
[2025-05-17 11:32:46]     "exeErrorDiag": "",
[2025-05-17 11:32:46]     "pilotErrorCode": 0,
[2025-05-17 11:32:46]     "pilotErrorDiag": "",
[2025-05-17 11:32:46]  *** Listing of results directory ***
[2025-05-17 11:32:46] total 633804
[2025-05-17 11:32:46] drwx------. 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-05-17 11:32:46] -rw-r--r--. 1 boincer umatlas    495897 May 17 03:56 pilot3.tar.gz
[2025-05-17 11:32:46] -rwx------. 1 boincer umatlas     37140 May 17 04:28 runpilot2-wrapper.sh
[2025-05-17 11:32:46] -rw-r--r--. 1 boincer umatlas      5111 May 17 04:28 queuedata.json
[2025-05-17 11:32:46] -rw-r--r--. 1 boincer umatlas       100 May 17 07:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 11:32:46] -rwxr-xr-x. 1 boincer umatlas      7986 May 17 07:10 run_atlas
[2025-05-17 11:32:46] -rw-r--r--. 1 boincer umatlas       105 May 17 07:10 job.xml
[2025-05-17 11:32:46] -rw-r--r--. 3 boincer umatlas 222573719 May 17 07:10 EVNT.44638096._002113.pool.root.1
[2025-05-17 11:32:46] -rw-r--r--. 3 boincer umatlas 222573719 May 17 07:10 ATLAS.root_0
[2025-05-17 11:32:46] -rw-r--r--. 2 boincer umatlas     17569 May 17 07:10 start_atlas.sh
[2025-05-17 11:32:46] drwxrwx--x. 2 boincer umatlas      4096 May 17 07:10 shared
[2025-05-17 11:32:46] -rw-r--r--. 2 boincer umatlas    508880 May 17 07:10 input.tar.gz
[2025-05-17 11:32:46] -rw-r--r--. 1 boincer umatlas         0 May 17 07:10 boinc_lockfile
[2025-05-17 11:32:46] -rw-r--r--. 1 boincer umatlas      2539 May 17 08:41 pandaJob.out
[2025-05-17 11:32:46] -rw-------. 1 boincer umatlas       467 May 17 08:41 setup.sh.local
[2025-05-17 11:32:46] -rw-------. 1 boincer umatlas    994651 May 17 08:41 agis_schedconf.cvmfs.json
[2025-05-17 11:32:46] -rw-------. 1 boincer umatlas 197663169 May 17 11:31 HITS.44638099._052850.pool.root.1
[2025-05-17 11:32:46] -rw-r--r--. 1 boincer umatlas      7161 May 17 11:31 init_data.xml
[2025-05-17 11:32:46] -rw-r--r--. 1 boincer umatlas       531 May 17 11:31 boinc_task_state.xml
[2025-05-17 11:32:46] -rw-------. 1 boincer umatlas      1036 May 17 11:31 memory_monitor_summary.json
[2025-05-17 11:32:46] -rw-------. 1 boincer umatlas   1596741 May 17 11:32 agis_ddmendpoints.agis.ALL.json
[2025-05-17 11:32:46] -rw-------. 1 boincer umatlas    362165 May 17 11:32 log.44638099._052850.job.log.tgz.1
[2025-05-17 11:32:46] -rw-------. 1 boincer umatlas        96 May 17 11:32 pilot_heartbeat.json
[2025-05-17 11:32:46] -rw-------. 1 boincer umatlas      7692 May 17 11:32 heartbeat.json
[2025-05-17 11:32:46] -rw-r--r--. 1 boincer umatlas      8192 May 17 11:32 boinc_mmap_file
[2025-05-17 11:32:46] -rw-r--r--. 1 boincer umatlas        28 May 17 11:32 wrapper_checkpoint.txt
[2025-05-17 11:32:46] -rw-------. 1 boincer umatlas      4426 May 17 11:32 pilotlog.txt
[2025-05-17 11:32:46] -rw-------. 1 boincer umatlas    818120 May 17 11:32 log.44638099._052850.job.log.1
[2025-05-17 11:32:46] -rw-------. 1 boincer umatlas       357 May 17 11:32 output.list
[2025-05-17 11:32:46] -rw-r--r--. 1 boincer umatlas       620 May 17 11:32 runtime_log
[2025-05-17 11:32:46] -rw-------. 1 boincer umatlas   1198080 May 17 11:32 result.tar.gz
[2025-05-17 11:32:46] -rw-r--r--. 1 boincer umatlas     11494 May 17 11:32 runtime_log.err
[2025-05-17 11:32:46] -rw-------. 1 boincer umatlas       778 May 17 11:32 JQIMDmC5Ra7n9Rq4apOajLDm4fhM0noT9bVof3QYDmVFKKDm3S7qGo.diag
[2025-05-17 11:32:46] -rw-r--r--. 1 boincer umatlas     23002 May 17 11:32 stderr.txt
[2025-05-17 11:32:46] HITS file was successfully produced:
[2025-05-17 11:32:46] -rw-------. 1 boincer umatlas 197663169 May 17 11:31 shared/HITS.pool.root.1
[2025-05-17 11:32:46]  *** Contents of shared directory: ***
[2025-05-17 11:32:46] total 412088
[2025-05-17 11:32:46] -rw-r--r--. 3 boincer umatlas 222573719 May 17 07:10 ATLAS.root_0
[2025-05-17 11:32:46] -rw-r--r--. 2 boincer umatlas     17569 May 17 07:10 start_atlas.sh
[2025-05-17 11:32:46] -rw-r--r--. 2 boincer umatlas    508880 May 17 07:10 input.tar.gz
[2025-05-17 11:32:46] -rw-------. 1 boincer umatlas 197663169 May 17 11:31 HITS.pool.root.1
[2025-05-17 11:32:46] -rw-------. 1 boincer umatlas   1198080 May 17 11:32 result.tar.gz
11:32:47 (3052820): run_atlas exited; CPU time 29111.533629
11:32:47 (3052820): called boinc_finish(0)

</stderr_txt>
]]>

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