Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:01:38 (3703687): wrapper (7.7.26015): starting
06:01:38 (3703687): wrapper: running run_atlas (--nthreads 8)
[2025-05-17 06:01:39] Arguments: --nthreads 8
[2025-05-17 06:01:39] Threads: 8
[2025-05-17 06:01:39] Checking for CVMFS
[2025-05-17 06:01:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 06:01:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 06:01:39] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 06:01:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 06:01:40] 2.12.6.0 11692 5274 185336 146096 1 394 32317419 40960001 43228 16776704 0 53597490 99.714 46418764 40728 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-17 06:01:40] CVMFS is ok
[2025-05-17 06:01:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-17 06:01:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-17 06:01:40] Further information can be found at the LHC@home message board.
[2025-05-17 06:01:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 06:01:40] Checking for apptainer binary...
[2025-05-17 06:01:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 06:01:40] Running /usr/bin/apptainer --version
[2025-05-17 06:01:40] apptainer version 1.4.0-1.el9
[2025-05-17 06:01:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 06:01:40] c8-7-3.aglt2.org
[2025-05-17 06:01:40] apptainer works
[2025-05-17 06:01:40] Set ATHENA_PROC_NUMBER=8
[2025-05-17 06:01:40] Set ATHENA_CORE_NUMBER=8
[2025-05-17 06:01:40] Starting ATLAS job with PandaID=6653395698
[2025-05-17 06:01:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 07:35:27]  *** The last 200 lines of the pilot log: ***
[2025-05-17 07:35:27] 2025-05-17 11:34:28,480 | INFO     | job 6653395698 has finished - writing final server update
[2025-05-17 07:35:27] 2025-05-17 11:34:28,480 | INFO     | total number of processed events: 400 (read)
[2025-05-17 07:35:27] 2025-05-17 11:34:28,485 | INFO     | executing command: lscpu
[2025-05-17 07:35:27] 2025-05-17 11:34:28,554 | INFO     | monitor loop #371: job 0:6653395698 is in state 'finished'
[2025-05-17 07:35:27] 2025-05-17 11:34:28,555 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 07:35:27] 2025-05-17 11:34:28,761 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-17 07:35:27] 2025-05-17 11:34:31,069 | INFO     | monitor loop #372: job 0:6653395698 is in state 'finished'
[2025-05-17 07:35:27] 2025-05-17 11:34:31,070 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 07:35:27] 2025-05-17 11:34:33,575 | INFO     | monitor loop #373: job 0:6653395698 is in state 'finished'
[2025-05-17 07:35:27] 2025-05-17 11:34:33,575 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 07:35:27] 2025-05-17 11:34:36,084 | INFO     | monitor loop #374: job 0:6653395698 is in state 'finished'
[2025-05-17 07:35:27] 2025-05-17 11:34:36,084 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 07:35:27] 2025-05-17 11:34:38,595 | INFO     | monitor loop #375: job 0:6653395698 is in state 'finished'
[2025-05-17 07:35:27] 2025-05-17 11:34:38,595 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 07:35:27] 2025-05-17 11:34:41,112 | INFO     | monitor loop #376: job 0:6653395698 is in state 'finished'
[2025-05-17 07:35:27] 2025-05-17 11:34:41,114 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 07:35:27] 2025-05-17 11:34:43,619 | INFO     | monitor loop #377: job 0:6653395698 is in state 'finished'
[2025-05-17 07:35:27] 2025-05-17 11:34:43,619 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 07:35:27] 2025-05-17 11:34:46,129 | INFO     | monitor loop #378: job 0:6653395698 is in state 'finished'
[2025-05-17 07:35:27] 2025-05-17 11:34:46,129 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 07:35:27] 2025-05-17 11:34:47,166 | INFO     | PID=3729125 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-17 07:35:27] 2025-05-17 11:34:47,166 | INFO     | .. there are 73 such processes running
[2025-05-17 07:35:27] 2025-05-17 11:34:48,640 | INFO     | monitor loop #379: job 0:6653395698 is in state 'finished'
[2025-05-17 07:35:27] 2025-05-17 11:34:48,640 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 07:35:27] 2025-05-17 11:34:51,156 | INFO     | monitor loop #380: job 0:6653395698 is in state 'finished'
[2025-05-17 07:35:27] 2025-05-17 11:34:51,156 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 07:35:27] 2025-05-17 11:34:53,667 | INFO     | monitor loop #381: job 0:6653395698 is in state 'finished'
[2025-05-17 07:35:27] 2025-05-17 11:34:53,667 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 07:35:27] 2025-05-17 11:34:56,172 | INFO     | monitor loop #382: job 0:6653395698 is in state 'finished'
[2025-05-17 07:35:27] 2025-05-17 11:34:56,172 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 07:35:27] 2025-05-17 11:34:58,693 | INFO     | monitor loop #383: job 0:6653395698 is in state 'finished'
[2025-05-17 07:35:27] 2025-05-17 11:34:58,715 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 07:35:27] 2025-05-17 11:35:01,220 | INFO     | monitor loop #384: job 0:6653395698 is in state 'finished'
[2025-05-17 07:35:27] 2025-05-17 11:35:01,220 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 07:35:27] 2025-05-17 11:35:03,744 | INFO     | monitor loop #385: job 0:6653395698 is in state 'finished'
[2025-05-17 07:35:27] 2025-05-17 11:35:03,744 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 07:35:27] 2025-05-17 11:35:06,249 | INFO     | monitor loop #386: job 0:6653395698 is in state 'finished'
[2025-05-17 07:35:27] 2025-05-17 11:35:06,249 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 07:35:27] 2025-05-17 11:35:07,249 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-17 07:35:27] 2025-05-17 11:35:07,254 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6653395698/memory_monitor_summary.json (trf name=prmon)
[2025-05-17 07:35:27] 2025-05-17 11:35:07,255 | INFO     | extracted standard info from prmon json
[2025-05-17 07:35:27] 2025-05-17 11:35:07,255 | INFO     | extracted standard memory fields from prmon json
[2025-05-17 07:35:27] 2025-05-17 11:35:07,255 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-17 07:35:27] 2025-05-17 11:35:07,255 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-17 07:35:27] 2025-05-17 11:35:07,255 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-17 07:35:27] 2025-05-17 11:35:07,256 | INFO     | fitting pss+swap vs Time
[2025-05-17 07:35:27] 2025-05-17 11:35:07,256 | INFO     | sum of square deviations: 164761245.95061755
[2025-05-17 07:35:27] 2025-05-17 11:35:07,256 | INFO     | sum of deviations: 24535746760.358025
[2025-05-17 07:35:27] 2025-05-17 11:35:07,256 | INFO     | mean x: 1747479014.0246913
[2025-05-17 07:35:27] 2025-05-17 11:35:07,257 | INFO     | mean y: 2157748.3209876544
[2025-05-17 07:35:27] 2025-05-17 11:35:07,257 | INFO     | -- intersect: -260227135310.07648
[2025-05-17 07:35:27] 2025-05-17 11:35:07,257 | INFO     | intersect: -260227135310.07648
[2025-05-17 07:35:27] 2025-05-17 11:35:07,257 | INFO     | chi2: 2.8531975400982255
[2025-05-17 07:35:27] 2025-05-17 11:35:07,257 | INFO     | -- intersect: -260227135310.07648
[2025-05-17 07:35:27] 2025-05-17 11:35:07,257 | INFO     | current memory leak: 148.92 B/s (using 81 data points, chi2=2.85)
[2025-05-17 07:35:27] 2025-05-17 11:35:07,257 | INFO     | ..............................
[2025-05-17 07:35:27] 2025-05-17 11:35:07,257 | INFO     | . Timing measurements:
[2025-05-17 07:35:27] 2025-05-17 11:35:07,257 | INFO     | . get job = 0 s
[2025-05-17 07:35:27] 2025-05-17 11:35:07,257 | INFO     | . initial setup = 5 s
[2025-05-17 07:35:27] 2025-05-17 11:35:07,257 | INFO     | . payload setup = 35 s
[2025-05-17 07:35:27] 2025-05-17 11:35:07,257 | INFO     | . stage-in = 0 s
[2025-05-17 07:35:27] 2025-05-17 11:35:07,257 | INFO     | . payload execution = 5385 s
[2025-05-17 07:35:27] 2025-05-17 11:35:07,257 | INFO     | . stage-out = 28 s
[2025-05-17 07:35:27] 2025-05-17 11:35:07,257 | INFO     | . log creation = 0 s
[2025-05-17 07:35:27] 2025-05-17 11:35:07,257 | INFO     | ..............................
[2025-05-17 07:35:27] 2025-05-17 11:35:07,403 | INFO     | 
[2025-05-17 07:35:27] 2025-05-17 11:35:07,403 | INFO     | job summary report
[2025-05-17 07:35:27] 2025-05-17 11:35:07,403 | INFO     | --------------------------------------------------
[2025-05-17 07:35:27] 2025-05-17 11:35:07,403 | INFO     | PanDA job id: 6653395698
[2025-05-17 07:35:27] 2025-05-17 11:35:07,403 | INFO     | task id: 44638099
[2025-05-17 07:35:27] 2025-05-17 11:35:07,403 | INFO     | errors: (none)
[2025-05-17 07:35:27] 2025-05-17 11:35:07,403 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 07:35:27] 2025-05-17 11:35:07,403 | INFO     | pilot state: finished 
[2025-05-17 07:35:27] 2025-05-17 11:35:07,403 | INFO     | transexitcode: 0
[2025-05-17 07:35:27] 2025-05-17 11:35:07,403 | INFO     | exeerrorcode: 0
[2025-05-17 07:35:27] 2025-05-17 11:35:07,403 | INFO     | exeerrordiag: 
[2025-05-17 07:35:27] 2025-05-17 11:35:07,403 | INFO     | exitcode: 0
[2025-05-17 07:35:27] 2025-05-17 11:35:07,403 | INFO     | exitmsg: OK
[2025-05-17 07:35:27] 2025-05-17 11:35:07,403 | INFO     | cpuconsumptiontime: 27583 s
[2025-05-17 07:35:27] 2025-05-17 11:35:07,403 | INFO     | nevents: 400
[2025-05-17 07:35:27] 2025-05-17 11:35:07,403 | INFO     | neventsw: 0
[2025-05-17 07:35:27] 2025-05-17 11:35:07,403 | INFO     | pid: 3758923
[2025-05-17 07:35:27] 2025-05-17 11:35:07,403 | INFO     | pgrp: 3758923
[2025-05-17 07:35:27] 2025-05-17 11:35:07,403 | INFO     | corecount: 8
[2025-05-17 07:35:27] 2025-05-17 11:35:07,403 | INFO     | event service: False
[2025-05-17 07:35:27] 2025-05-17 11:35:07,403 | INFO     | sizes: {0: 2393491, 1: 2393690, 11: 2393690, 22: 2393924, 33: 2393952, 5426: 2420515, 5455: 2429626, 5458: 2429682, 5496: 2429682}
[2025-05-17 07:35:27] 2025-05-17 11:35:07,403 | INFO     | --------------------------------------------------
[2025-05-17 07:35:27] 2025-05-17 11:35:07,404 | INFO     | 
[2025-05-17 07:35:27] 2025-05-17 11:35:07,404 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-05-17 07:35:27] 2025-05-17 11:35:07,720 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 07:35:27] 2025-05-17 11:35:07,720 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 07:35:27] 2025-05-17 11:35:07,720 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 07:35:27] 2025-05-17 11:35:07,720 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 07:35:27] 2025-05-17 11:35:07,720 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 07:35:27] 2025-05-17 11:35:07,720 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 07:35:27] 2025-05-17 11:35:07,720 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 07:35:27] 2025-05-17 11:35:07,720 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 07:35:27] 2025-05-17 11:35:07,720 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 07:35:27] 2025-05-17 11:35:07,720 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 07:35:27] 2025-05-17 11:35:07,720 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 07:35:27] 2025-05-17 11:35:07,720 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 07:35:27] 2025-05-17 11:35:07,720 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 07:35:27] 2025-05-17 11:35:07,720 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 07:35:27] 2025-05-17 11:35:07,720 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 07:35:27] 2025-05-17 11:35:07,720 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 07:35:27] 2025-05-17 11:35:07,720 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 07:35:27] 2025-05-17 11:35:07,720 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 07:35:27] 2025-05-17 11:35:07,720 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 07:35:27] 2025-05-17 11:35:07,720 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 07:35:27] 2025-05-17 11:35:07,721 | INFO     | job 6653395698 has completed (purged errors)
[2025-05-17 07:35:27] 2025-05-17 11:35:07,721 | INFO     | overall cleanup function is called
[2025-05-17 07:35:27] 2025-05-17 11:35:08,728 | INFO     | --- collectZombieJob: --- 10, [3758923]
[2025-05-17 07:35:27] 2025-05-17 11:35:08,728 | INFO     | zombie collector waiting for pid 3758923
[2025-05-17 07:35:27] 2025-05-17 11:35:08,728 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 07:35:27] 2025-05-17 11:35:08,729 | INFO     | collected zombie processes
[2025-05-17 07:35:27] 2025-05-17 11:35:08,729 | INFO     | will attempt to kill all subprocesses of pid=3758923
[2025-05-17 07:35:27] 2025-05-17 11:35:10,855 | INFO     | process IDs to be killed: [3758923] (in reverse order)
[2025-05-17 07:35:27] 2025-05-17 11:35:11,188 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 07:35:27] 2025-05-17 11:35:11,189 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 07:35:27] 2025-05-17 11:35:11,317 | INFO     | did not find any defunct processes belonging to 3758923
[2025-05-17 07:35:27] 2025-05-17 11:35:11,396 | INFO     | did not find any defunct processes belonging to 3758923
[2025-05-17 07:35:27] 2025-05-17 11:35:11,396 | INFO     | ready for new job
[2025-05-17 07:35:27] 2025-05-17 11:35:11,397 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 07:35:27] 2025-05-17 11:35:11,398 | INFO     | **************************************
[2025-05-17 07:35:27] 2025-05-17 11:35:11,398 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 07:35:27] 2025-05-17 11:35:11,398 | INFO     | **************************************
[2025-05-17 07:35:27] 2025-05-17 11:35:11,398 | INFO     | 
[2025-05-17 07:35:27] 2025-05-17 11:35:11,407 | INFO     | architecture information:
[2025-05-17 07:35:27] 2025-05-17 11:35:11,418 | INFO     | executing command: cat /etc/os-release
[2025-05-17 07:35:27] 2025-05-17 11:35:11,495 | INFO     | cat /etc/os-release:
[2025-05-17 07:35:27] NAME="CentOS Linux"
[2025-05-17 07:35:27] VERSION="7 (Core)"
[2025-05-17 07:35:27] ID="centos"
[2025-05-17 07:35:27] ID_LIKE="rhel fedora"
[2025-05-17 07:35:27] VERSION_ID="7"
[2025-05-17 07:35:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 07:35:27] ANSI_COLOR="0;31"
[2025-05-17 07:35:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 07:35:27] HOME_URL="https://www.centos.org/"
[2025-05-17 07:35:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 07:35:27] 
[2025-05-17 07:35:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 07:35:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 07:35:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 07:35:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 07:35:27] 
[2025-05-17 07:35:27] 2025-05-17 11:35:11,495 | INFO     | **************************************
[2025-05-17 07:35:27] 2025-05-17 11:35:11,558 | INFO     | PID=3729125 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-17 07:35:27] 2025-05-17 11:35:11,559 | INFO     | .. there are 73 such processes running
[2025-05-17 07:35:27] 2025-05-17 11:35:11,998 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-05-17 07:35:27] 2025-05-17 11:35:12,100 | INFO     | sufficient remaining disk space (169866166272 B)
[2025-05-17 07:35:27] 2025-05-17 11:35:12,100 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 07:35:27] 2025-05-17 11:35:12,100 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 07:35:27] 2025-05-17 11:35:12,100 | INFO     | update_server=False
[2025-05-17 07:35:27] 2025-05-17 11:35:12,101 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 07:35:27] 2025-05-17 11:35:12,101 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 07:35:27] 2025-05-17 11:35:12,109 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-17 07:35:27] 2025-05-17 11:35:12,110 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 07:35:27] 2025-05-17 11:35:12,110 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 07:35:27] 2025-05-17 11:35:12,110 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 07:35:27] 2025-05-17 11:35:12,315 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 07:35:27] 2025-05-17 11:35:12,316 | INFO     | aborting loop
[2025-05-17 07:35:27] 2025-05-17 11:35:12,397 | INFO     | all data control threads have been joined
[2025-05-17 07:35:27] 2025-05-17 11:35:12,422 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 07:35:27] 2025-05-17 11:35:13,106 | INFO     | [job] retrieve thread has finished
[2025-05-17 07:35:27] 2025-05-17 11:35:13,124 | INFO     | [job] validate thread has finished
[2025-05-17 07:35:27] 2025-05-17 11:35:13,126 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 07:35:27] 2025-05-17 11:35:13,238 | INFO     | all job control threads have been joined
[2025-05-17 07:35:27] 2025-05-17 11:35:13,280 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 07:35:27] 2025-05-17 11:35:13,317 | INFO     | all payload control threads have been joined
[2025-05-17 07:35:27] 2025-05-17 11:35:13,331 | INFO     | [job] job monitor thread has finished
[2025-05-17 07:35:27] 2025-05-17 11:35:13,403 | INFO     | [data] control thread has finished
[2025-05-17 07:35:27] 2025-05-17 11:35:13,428 | INFO     | [job] queue monitor thread has finished
[2025-05-17 07:35:27] 2025-05-17 11:35:13,619 | INFO     | [data] copytool_in thread has finished
[2025-05-17 07:35:27] 2025-05-17 11:35:13,940 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 07:35:27] 2025-05-17 11:35:14,109 | INFO     | [data] copytool_out thread has finished
[2025-05-17 07:35:27] 2025-05-17 11:35:14,143 | INFO     | [payload] validate_post thread has finished
[2025-05-17 07:35:27] 2025-05-17 11:35:14,244 | INFO     | [job] control thread has finished
[2025-05-17 07:35:27] 2025-05-17 11:35:14,246 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 07:35:27] 2025-05-17 11:35:14,323 | INFO     | [payload] control thread has finished
[2025-05-17 07:35:27] 2025-05-17 11:35:14,508 | INFO     | [payload] failed_post thread has finished
[2025-05-17 07:35:27] 2025-05-17 11:35:15,258 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 07:35:27] 2025-05-17 11:35:19,266 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 07:35:27] 2025-05-17 11:35:21,034 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140383703545664)>', '<ExcThread(monitor, started 140383044478720)>']
[2025-05-17 07:35:27] 2025-05-17 11:35:21,163 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 07:35:27] 2025-05-17 11:35:21,163 | INFO     | [monitor] control thread has ended
[2025-05-17 07:35:27] 2025-05-17 11:35:26,066 | INFO     | all workflow threads have been joined
[2025-05-17 07:35:27] 2025-05-17 11:35:26,066 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 07:35:27] 2025-05-17 11:35:26,067 | INFO     | traces error code: 0
[2025-05-17 07:35:27] 2025-05-17 11:35:26,067 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 07:35:27] 2025-05-17 11:35:26,628 [wrapper] ==== pilot stdout END ====
[2025-05-17 07:35:27] 2025-05-17 11:35:26,630 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 07:35:27] 2025-05-17 11:35:26,632 [wrapper] pilotpid: 3729125
[2025-05-17 07:35:27] 2025-05-17 11:35:26,634 [wrapper] Pilot exit status: 0
[2025-05-17 07:35:27] 2025-05-17 11:35:26,751 [wrapper] pandaids: 6653395698
[2025-05-17 07:35:27] 2025-05-17 11:35:26,890 [wrapper] cleanup supervisor_pilot 1473163 3729126
[2025-05-17 07:35:27] 2025-05-17 11:35:26,896 [wrapper] Test setup, not cleaning
[2025-05-17 07:35:27] 2025-05-17 11:35:26,900 [wrapper] apfmon messages muted
[2025-05-17 07:35:27] 2025-05-17 11:35:26,903 [wrapper] ==== wrapper stdout END ====
[2025-05-17 07:35:27] 2025-05-17 11:35:26,907 [wrapper] ==== wrapper stderr END ====
[2025-05-17 07:35:27]  *** Error codes and diagnostics ***
[2025-05-17 07:35:27]     "exeErrorCode": 0,
[2025-05-17 07:35:27]     "exeErrorDiag": "",
[2025-05-17 07:35:27]     "pilotErrorCode": 0,
[2025-05-17 07:35:27]     "pilotErrorDiag": "",
[2025-05-17 07:35:27]  *** Listing of results directory ***
[2025-05-17 07:35:27] total 401480
[2025-05-17 07:35:27] -rw-r--r--. 1 boincer umatlas    495897 May 17 03:26 pilot3.tar.gz
[2025-05-17 07:35:27] -rw-r--r--. 1 boincer umatlas      5111 May 17 03:31 queuedata.json
[2025-05-17 07:35:27] -rwx------. 1 boincer umatlas     37140 May 17 03:31 runpilot2-wrapper.sh
[2025-05-17 07:35:27] -rw-r--r--. 1 boincer umatlas       100 May 17 06:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 07:35:27] -rwxr-xr-x. 1 boincer umatlas      7986 May 17 06:01 run_atlas
[2025-05-17 07:35:27] -rw-r--r--. 1 boincer umatlas       105 May 17 06:01 job.xml
[2025-05-17 07:35:27] -rw-r--r--. 2 boincer umatlas 220257713 May 17 06:01 EVNT.44638096._002085.pool.root.1
[2025-05-17 07:35:27] -rw-r--r--. 2 boincer umatlas     17569 May 17 06:01 start_atlas.sh
[2025-05-17 07:35:27] drwxrwx--x. 2 boincer umatlas      4096 May 17 06:01 shared
[2025-05-17 07:35:27] -rw-r--r--. 2 boincer umatlas    508881 May 17 06:01 input.tar.gz
[2025-05-17 07:35:27] -rw-r--r--. 1 boincer umatlas         0 May 17 06:01 boinc_lockfile
[2025-05-17 07:35:27] -rw-r--r--. 1 boincer umatlas      2539 May 17 06:01 pandaJob.out
[2025-05-17 07:35:27] -rw-------. 1 boincer umatlas       467 May 17 06:01 setup.sh.local
[2025-05-17 07:35:27] -rw-------. 1 boincer umatlas    994635 May 17 06:02 agis_schedconf.cvmfs.json
[2025-05-17 07:35:27] -rw-------. 1 boincer umatlas   1596741 May 17 06:02 agis_ddmendpoints.agis.ALL.json
[2025-05-17 07:35:27] drwx------. 4 boincer umatlas      4096 May 17 06:02 pilot3
[2025-05-17 07:35:27] -rw-r--r--. 1 boincer umatlas      7160 May 17 07:29 init_data.xml
[2025-05-17 07:35:27] -rw-------. 1 boincer umatlas 185371104 May 17 07:33 HITS.44638099._052175.pool.root.1
[2025-05-17 07:35:27] -rw-r--r--. 1 boincer umatlas       530 May 17 07:33 boinc_task_state.xml
[2025-05-17 07:35:27] -rw-------. 1 boincer umatlas      1034 May 17 07:33 memory_monitor_summary.json
[2025-05-17 07:35:27] -rw-------. 1 boincer umatlas    321496 May 17 07:33 log.44638099._052175.job.log.tgz.1
[2025-05-17 07:35:27] -rw-------. 1 boincer umatlas        95 May 17 07:34 pilot_heartbeat.json
[2025-05-17 07:35:27] -rw-------. 1 boincer umatlas      7712 May 17 07:35 heartbeat.json
[2025-05-17 07:35:27] -rw-------. 1 boincer umatlas      4872 May 17 07:35 pilotlog.txt
[2025-05-17 07:35:27] -rw-------. 1 boincer umatlas    503311 May 17 07:35 log.44638099._052175.job.log.1
[2025-05-17 07:35:27] -rw-r--r--. 1 boincer umatlas      8192 May 17 07:35 boinc_mmap_file
[2025-05-17 07:35:27] -rw-r--r--. 1 boincer umatlas        27 May 17 07:35 wrapper_checkpoint.txt
[2025-05-17 07:35:27] -rw-------. 1 boincer umatlas       357 May 17 07:35 output.list
[2025-05-17 07:35:27] -rw-r--r--. 1 boincer umatlas       620 May 17 07:35 runtime_log
[2025-05-17 07:35:27] -rw-------. 1 boincer umatlas    839680 May 17 07:35 result.tar.gz
[2025-05-17 07:35:27] -rw-------. 1 boincer umatlas       650 May 17 07:35 ZJYNDmcCRa7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmy1NKDmFRg5ln.diag
[2025-05-17 07:35:27] -rw-r--r--. 1 boincer umatlas     11408 May 17 07:35 runtime_log.err
[2025-05-17 07:35:27] -rw-r--r--. 1 boincer umatlas     22506 May 17 07:35 stderr.txt
[2025-05-17 07:35:27] HITS file was successfully produced:
[2025-05-17 07:35:27] -rw-------. 1 boincer umatlas 185371104 May 17 07:33 shared/HITS.pool.root.1
[2025-05-17 07:35:27]  *** Contents of shared directory: ***
[2025-05-17 07:35:27] total 397472
[2025-05-17 07:35:27] -rw-r--r--. 2 boincer umatlas 220257713 May 17 06:01 ATLAS.root_0
[2025-05-17 07:35:27] -rw-r--r--. 2 boincer umatlas     17569 May 17 06:01 start_atlas.sh
[2025-05-17 07:35:27] -rw-r--r--. 2 boincer umatlas    508881 May 17 06:01 input.tar.gz
[2025-05-17 07:35:27] -rw-------. 1 boincer umatlas 185371104 May 17 07:33 HITS.pool.root.1
[2025-05-17 07:35:27] -rw-------. 1 boincer umatlas    839680 May 17 07:35 result.tar.gz
07:35:29 (3703687): run_atlas exited; CPU time 27782.618952
07:35:29 (3703687): called boinc_finish(0)

</stderr_txt>
]]>

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