Stderr output

<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-17 22:51:41 (11352): Detected: vboxwrapper 26206
2025-05-17 22:51:41 (11352): Detected: BOINC client v7.16.20
2025-05-17 22:51:41 (11352): Detected: VirtualBox VboxManage Interface (Version: 6.1.50)
2025-05-17 22:51:42 (11352): Successfully copied 'init_data.xml' to the shared directory.
2025-05-17 22:51:42 (11352): Create VM. (boinc_6c4fba887235d7ef, slot#6)
2025-05-17 22:51:43 (11352): Setting Memory Size for VM. (4700MB)
2025-05-17 22:51:43 (11352): Setting CPU Count for VM. (7)
2025-05-17 22:51:43 (11352): Setting Chipset Options for VM.
2025-05-17 22:51:43 (11352): Setting Graphics Controller Options for VM.
2025-05-17 22:51:44 (11352): Setting Boot Options for VM.
2025-05-17 22:51:44 (11352): Setting Network Configuration for NAT.
2025-05-17 22:51:44 (11352): Enabling VM Network Access.
2025-05-17 22:51:44 (11352): Disabling USB Support for VM.
2025-05-17 22:51:45 (11352): Disabling COM Port Support for VM.
2025-05-17 22:51:45 (11352): Disabling LPT Port Support for VM.
2025-05-17 22:51:45 (11352): Disabling Audio Support for VM.
2025-05-17 22:51:45 (11352): Disabling Clipboard Support for VM.
2025-05-17 22:51:46 (11352): Disabling Drag and Drop Support for VM.
2025-05-17 22:51:46 (11352): Adding storage controller(s) to VM.
2025-05-17 22:51:46 (11352): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-17 22:51:47 (11352): Adding VirtualBox Guest Additions to VM.
2025-05-17 22:51:47 (11352): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-17 22:51:47 (11352): forwarding host port 53974 to guest port 80
2025-05-17 22:51:47 (11352): Enabling remote desktop for VM.
2025-05-17 22:51:48 (11352): Required extension pack not installed, remote desktop not enabled.
2025-05-17 22:51:48 (11352): Enabling shared directory for VM.
2025-05-17 22:51:48 (11352): Starting VM using VBoxManage interface. (boinc_6c4fba887235d7ef, slot#6)
2025-05-17 22:51:52 (11352): Successfully started VM. (PID = '16236')
2025-05-17 22:51:52 (11352): Reporting VM Process ID to BOINC.
2025-05-17 22:51:52 (11352): Guest Log: BIOS: VirtualBox 6.1.50
2025-05-17 22:51:52 (11352): Guest Log: CPUID EDX: 0x178bfbff
2025-05-17 22:51:52 (11352): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-17 22:51:52 (11352): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-17 22:51:52 (11352): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-17 22:51:52 (11352): Detected: Web Application Enabled (http://localhost:53974)
2025-05-17 22:51:52 (11352): Preference change detected
2025-05-17 22:51:52 (11352): Setting CPU throttle for VM. (100%)
2025-05-17 22:51:52 (11352): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 80 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-17 22:51:54 (11352): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-17 22:51:54 (11352): Guest Log: BIOS: Booting from Hard Disk...
2025-05-17 22:51:58 (11352): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-17 22:51:58 (11352): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-17 22:51:58 (11352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-17 22:51:58 (11352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-17 22:51:58 (11352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-17 22:51:58 (11352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-17 22:51:58 (11352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-17 22:51:58 (11352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-17 22:51:58 (11352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-17 22:51:58 (11352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-17 22:51:58 (11352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-17 22:51:58 (11352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-17 22:51:58 (11352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-17 22:51:58 (11352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-17 22:51:58 (11352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-17 22:51:58 (11352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-17 22:51:58 (11352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-17 22:51:58 (11352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-17 22:51:58 (11352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-17 22:51:58 (11352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-17 22:51:58 (11352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-17 22:51:58 (11352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-17 22:51:58 (11352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-17 22:51:58 (11352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-17 22:51:58 (11352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-17 22:51:58 (11352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-17 22:51:58 (11352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-17 22:51:58 (11352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-17 22:51:58 (11352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-17 22:51:58 (11352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-17 22:51:58 (11352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-17 22:51:58 (11352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-17 22:52:21 (11352): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-17 22:52:21 (11352): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-17 22:52:26 (11352): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-17 22:52:26 (11352): Guest Log: 00:00:00.000132 main     Log opened 2025-05-17T22:52:24.058851000Z
2025-05-17 22:52:26 (11352): Guest Log: 00:00:00.000200 main     OS Product: Linux
2025-05-17 22:52:26 (11352): Guest Log: 00:00:00.000221 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-17 22:52:26 (11352): Guest Log: 00:00:00.000238 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-17 22:52:26 (11352): Guest Log: 00:00:00.000260 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-17 22:52:26 (11352): Guest Log: 00:00:00.000260 main     Process ID: 1346
2025-05-17 22:52:26 (11352): Guest Log: 00:00:00.000261 main     Package type: LINUX_64BITS_GENERIC
2025-05-17 22:52:26 (11352): Guest Log: 00:00:00.000815 main     5.2.32 r132073 started. Verbose level = 0
2025-05-17 22:52:26 (11352): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-17 22:52:26 (11352): Guest Log: [INFO] Mounting shared directory
2025-05-17 22:52:26 (11352): Guest Log: [INFO] Checking for init_data.xml
2025-05-17 22:52:28 (11352): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-17 22:52:28 (11352): Guest Log: [INFO] Detected branch: prod
2025-05-17 22:52:28 (11352): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-17 22:52:28 (11352): Guest Log: Copying input files
2025-05-17 22:52:29 (11352): Guest Log: Copied input files into RunAtlas.
2025-05-17 22:52:29 (11352): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-17 22:52:29 (11352): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-17 22:52:29 (11352): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-17 22:52:29 (11352): Guest Log: Further information can be found at the LHC@home message board.
2025-05-17 22:52:36 (11352): Guest Log: 00:00:10.005090 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 208 831 896 000ns (GuestNow=1 747 515 135 228 927 000 ns GuestLast=1 747 522 344 060 823 000 ns fSetTimeLastLoop=true )
2025-05-17 22:52:38 (11352): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-17 22:52:38 (11352): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-17 22:52:38 (11352): Guest Log: 2.6.3.0 1623 0 30064 146112 4 1 3117515 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-17 22:52:39 (11352): Guest Log: copied the webapp to /var/www
2025-05-17 22:52:39 (11352): Guest Log: ATHENA_PROC_NUMBER=7
2025-05-17 22:52:39 (11352): Guest Log: ATHENA_CORE_NUMBER=7
2025-05-17 22:52:39 (11352): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-17 22:52:39 (11352): Guest Log:  *** Starting ATLAS job. (PandaID=6653395665 taskID=44638099) ***
2025-05-18 00:31:58 (11352): Status Report: Elapsed Time: '6000.000000'
2025-05-18 00:31:58 (11352): Status Report: CPU Time: '36078.984375'
2025-05-18 00:35:25 (11352): Guest Log:  *** Job finished ***
2025-05-18 00:35:25 (11352): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-18 00:35:25 (11352): Guest Log: 2025-05-17 22:34:53,406 | INFO     | [data] copytool_in thread has finished
2025-05-18 00:35:25 (11352): Guest Log: 2025-05-17 22:34:53,466 | INFO     | [payload] control thread has finished
2025-05-18 00:35:25 (11352): Guest Log: 2025-05-17 22:34:57,426 | INFO     | [data] queue_monitor thread has finished
2025-05-18 00:35:25 (11352): Guest Log: 2025-05-17 22:34:57,998 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139818244204352)>', '<ExcThread(monitor, started 139817291609856)>']
2025-05-18 00:35:25 (11352): Guest Log: 2025-05-17 22:34:58,973 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-18 00:35:25 (11352): Guest Log: 2025-05-17 22:34:58,973 | INFO     | [monitor] control thread has ended
2025-05-18 00:35:25 (11352): Guest Log: 2025-05-17 22:35:03,008 | INFO     | all workflow threads have been joined
2025-05-18 00:35:25 (11352): Guest Log: 2025-05-17 22:35:03,008 | INFO     | end of generic workflow (traces error code: 0)
2025-05-18 00:35:25 (11352): Guest Log: 2025-05-17 22:35:03,008 | INFO     | traces error code: 0
2025-05-18 00:35:25 (11352): Guest Log: 2025-05-17 22:35:03,008 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-18 00:35:25 (11352): Guest Log: 2025-05-17 22:35:03,077 [wrapper] ==== pilot stdout END ====
2025-05-18 00:35:25 (11352): Guest Log: 2025-05-17 22:35:03,081 [wrapper] ==== wrapper stdout RESUME ====
2025-05-18 00:35:25 (11352): Guest Log: 2025-05-17 22:35:03,085 [wrapper] pilotpid: 5979
2025-05-18 00:35:25 (11352): Guest Log: 2025-05-17 22:35:03,090 [wrapper] Pilot exit status: 0
2025-05-18 00:35:25 (11352): Guest Log: 2025-05-17 22:35:03,322 [wrapper] pandaids: 6653395665
2025-05-18 00:35:25 (11352): Guest Log: 2025-05-17 22:35:03,348 [wrapper] cleanup supervisor_pilot  1070 5980
2025-05-18 00:35:25 (11352): Guest Log: 2025-05-17 22:35:03,352 [wrapper] Test setup, not cleaning
2025-05-18 00:35:25 (11352): Guest Log: 2025-05-17 22:35:03,356 [wrapper] apfmon messages muted
2025-05-18 00:35:25 (11352): Guest Log: 2025-05-17 22:35:03,360 [wrapper] ==== wrapper stdout END ====
2025-05-18 00:35:25 (11352): Guest Log: 2025-05-17 22:35:03,363 [wrapper] ==== wrapper stderr END ====
2025-05-18 00:35:25 (11352): Guest Log:  *** Error codes and diagnostics ***
2025-05-18 00:35:25 (11352): Guest Log:     "exeErrorCode": 0,
2025-05-18 00:35:25 (11352): Guest Log:     "exeErrorDiag": "",
2025-05-18 00:35:25 (11352): Guest Log:     "pilotErrorCode": 0,
2025-05-18 00:35:25 (11352): Guest Log:     "pilotErrorDiag": "",
2025-05-18 00:35:25 (11352): Guest Log:  *** Listing of results directory ***
2025-05-18 00:35:25 (11352): Guest Log: total 196032
2025-05-18 00:35:25 (11352): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 17 07:26 pilot3.tar.gz
2025-05-18 00:35:25 (11352): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 17 07:31 queuedata.json
2025-05-18 00:35:25 (11352): Guest Log: -rwx------. 1 atlas atlas     37140 May 17 07:31 runpilot2-wrapper.sh
2025-05-18 00:35:25 (11352): Guest Log: -rwxr-xr-x. 1 atlas atlas    508881 May 17 20:52 input.tar.gz
2025-05-18 00:35:25 (11352): Guest Log: -rwxr-xr-x. 1 atlas atlas      8773 May 17 20:52 init_data.xml
2025-05-18 00:35:25 (11352): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 May 17 20:52 start_atlas.sh
2025-05-18 00:35:25 (11352): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 17 20:52 EVNT.44638096._002084.pool.root.1 -> /data/./ATLAS.root_0
2025-05-18 00:35:25 (11352): Guest Log: -rw-r--r--. 1 atlas atlas      2540 May 17 20:52 pandaJob.out
2025-05-18 00:35:25 (11352): Guest Log: -rw-------. 1 atlas atlas       424 May 17 20:52 setup.sh.local
2025-05-18 00:35:25 (11352): Guest Log: -rw-------. 1 atlas atlas    994635 May 17 20:52 agis_schedconf.cvmfs.json
2025-05-18 00:35:25 (11352): Guest Log: -rw-------. 1 atlas atlas   1596741 May 17 20:52 agis_ddmendpoints.agis.ALL.json
2025-05-18 00:35:25 (11352): Guest Log: drwx------. 4 atlas atlas      4096 May 17 20:52 pilot3
2025-05-18 00:35:25 (11352): Guest Log: -rw-------. 1 atlas atlas 195262595 May 17 22:34 HITS.44638099._052142.pool.root.1
2025-05-18 00:35:25 (11352): Guest Log: -rw-------. 1 atlas atlas      1021 May 17 22:34 memory_monitor_summary.json
2025-05-18 00:35:25 (11352): Guest Log: -rw-------. 1 atlas atlas    300692 May 17 22:34 log.44638099._052142.job.log.tgz.1
2025-05-18 00:35:25 (11352): Guest Log: -rw-------. 1 atlas atlas        95 May 17 22:34 pilot_heartbeat.json
2025-05-18 00:35:25 (11352): Guest Log: -rw-------. 1 atlas atlas      7707 May 17 22:34 heartbeat.json
2025-05-18 00:35:25 (11352): Guest Log: -rw-------. 1 atlas atlas      4536 May 17 22:35 pilotlog.txt
2025-05-18 00:35:25 (11352): Guest Log: -rw-------. 1 atlas atlas    546935 May 17 22:35 log.44638099._052142.job.log.1
2025-05-18 00:35:25 (11352): Guest Log: -rw-------. 1 atlas atlas       357 May 17 22:35 output.list
2025-05-18 00:35:25 (11352): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 17 22:35 runtime_log
2025-05-18 00:35:25 (11352): Guest Log: -rw-------. 1 atlas atlas    870400 May 17 22:35 result.tar.gz
2025-05-18 00:35:25 (11352): Guest Log: -rw-------. 1 atlas atlas       652 May 17 22:35 tNDNDmcCRa7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmj1NKDm6fv9jm.diag
2025-05-18 00:35:25 (11352): Guest Log: -rw-r--r--. 1 atlas atlas     10935 May 17 22:35 runtime_log.err
2025-05-18 00:35:25 (11352): Guest Log: Looking for outputfile HITS.44638099._052142.pool.root.1
2025-05-18 00:35:25 (11352): Guest Log: HITS file was successfully produced
2025-05-18 00:35:25 (11352): Guest Log: -rw-------. 1 atlas atlas 195262595 May 17 22:34 /home/atlas/RunAtlas/HITS.44638099._052142.pool.root.1
2025-05-18 00:35:26 (11352): Guest Log: Successfully finished the ATLAS job!
2025-05-18 00:35:26 (11352): Guest Log: Copying the results back to the shared directory!
2025-05-18 00:35:26 (11352): Guest Log:  *** Contents of shared directory: ***
2025-05-18 00:35:26 (11352): Guest Log: total 407216
2025-05-18 00:35:26 (11352): Guest Log: -rwxrwxrwx. 1 root root 220306346 May 17 20:51 ATLAS.root_0
2025-05-18 00:35:26 (11352): Guest Log: -rwxrwxrwx. 1 root root 195262595 May 17  2025 HITS.pool.root.1
2025-05-18 00:35:26 (11352): Guest Log: -rwxrwxrwx. 1 root root      8773 May 17 20:51 init_data.xml
2025-05-18 00:35:26 (11352): Guest Log: -rwxrwxrwx. 1 root root    508881 May 17 10:36 input.tar.gz
2025-05-18 00:35:26 (11352): Guest Log: -rwxrwxrwx. 1 root root    870400 May 17  2025 result.tar.gz
2025-05-18 00:35:26 (11352): Guest Log: -rwxrwxrwx. 1 root root     17569 May 17 10:36 start_atlas.sh
2025-05-18 00:35:26 (11352): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-18 00:35:26 (11352): VM Completion File Detected.
2025-05-18 00:35:26 (11352): Powering off VM.
2025-05-18 00:35:27 (11352): Successfully stopped VM.
2025-05-18 00:35:27 (11352): Deregistering VM. (boinc_6c4fba887235d7ef, slot#6)
2025-05-18 00:35:27 (11352): Removing network bandwidth throttle group from VM.
2025-05-18 00:35:27 (11352): Removing VM from VirtualBox.
00:35:33 (11352): called boinc_finish(0)

</stderr_txt>
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