Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:15:59 (3321981): wrapper (7.7.26015): starting
06:15:59 (3321981): wrapper: running run_atlas (--nthreads 9)
[2025-05-17 06:15:59] Arguments: --nthreads 9
[2025-05-17 06:15:59] Threads: 9
[2025-05-17 06:15:59] Checking for CVMFS
[2025-05-17 06:15:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 06:15:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 06:15:59] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 06:15:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 06:15:59] 2.12.6.0 5009 5414 189316 146098 3 15 32361549 32935937 11344 16776704 1 13023406 99.740 7908296 30698 http://cvmfs-s1.hpc.swin.edu.au:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-17 06:15:59] CVMFS is ok
[2025-05-17 06:15:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-17 06:15:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-17 06:15:59] Further information can be found at the LHC@home message board.
[2025-05-17 06:15:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 06:15:59] Checking for apptainer binary...
[2025-05-17 06:15:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 06:15:59] Running /usr/bin/apptainer --version
[2025-05-17 06:15:59] apptainer version 1.4.0-1.el9
[2025-05-17 06:15:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 06:15:59] c6-6-39-4.aglt2.org
[2025-05-17 06:15:59] apptainer works
[2025-05-17 06:15:59] Set ATHENA_PROC_NUMBER=9
[2025-05-17 06:15:59] Set ATHENA_CORE_NUMBER=9
[2025-05-17 06:15:59] Starting ATLAS job with PandaID=6652832286
[2025-05-17 06:15:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 07:55:41]  *** The last 200 lines of the pilot log: ***
[2025-05-17 07:55:41]  guid=8fbe49a6-329b-4da9-895e-658bfcf2f78a
[2025-05-17 07:55:41]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-17 07:55:41]  is_altstaged=None
[2025-05-17 07:55:41]  is_tar=False
[2025-05-17 07:55:41]  lfn=log.44638099._049869.job.log.tgz.1
[2025-05-17 07:55:41]  mtime=0
[2025-05-17 07:55:41]  protocol_id=None
[2025-05-17 07:55:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-17 07:55:41]  replicas=None
[2025-05-17 07:55:41]  scope=mc23_13p6TeV
[2025-05-17 07:55:41]  status=None
[2025-05-17 07:55:41]  status_code=0
[2025-05-17 07:55:41]  storage_token=
[2025-05-17 07:55:41]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6652832286/log.44638099._049869.job.log.tgz.1
[2025-05-17 07:55:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d4/a0/log.44638099._049869.job.log.tgz.1
[2025-05-17 07:55:41]  workdir=None
[2025-05-17 07:55:41] ]
[2025-05-17 07:55:41] 2025-05-17 11:55:22,525 | INFO     | transferring file log.44638099._049869.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6652832286/log.44638099._049869.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-05-17 07:55:41] 2025-05-17 11:55:22,525 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6652832286/log.44638099._049869.job.log.tgz.1 /tmp/boinchome/slots/1/log.44638099._049869.job
[2025-05-17 07:55:41] 2025-05-17 11:55:22,542 | INFO     | adding to output.list: log.44638099._049869.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d4/a0/log.44638099._049869.job.log.tg
[2025-05-17 07:55:41] 2025-05-17 11:55:22,543 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-17 07:55:41] 2025-05-17 11:55:22,543 | INFO     | summary of transferred files:
[2025-05-17 07:55:41] 2025-05-17 11:55:22,543 | INFO     |  -- lfn=log.44638099._049869.job.log.tgz.1, status_code=0, status=transferred
[2025-05-17 07:55:41] 2025-05-17 11:55:22,544 | INFO     | stage-out finished correctly
[2025-05-17 07:55:41] 2025-05-17 11:55:24,689 | INFO     | monitor loop #440: job 0:6652832286 is in state 'finished'
[2025-05-17 07:55:41] 2025-05-17 11:55:24,689 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 07:55:41] 2025-05-17 11:55:24,838 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-17 07:55:41] 2025-05-17 11:55:24,927 | INFO     | job 6652832286 has state=finished
[2025-05-17 07:55:41] 2025-05-17 11:55:24,927 | INFO     | preparing for final server update for job 6652832286 in state='finished'
[2025-05-17 07:55:41] 2025-05-17 11:55:24,928 | INFO     | this job has now completed (state=finished)
[2025-05-17 07:55:41] 2025-05-17 11:55:24,928 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-17 07:55:41] 2025-05-17 11:55:24,928 | INFO     | log transfer has been attempted: DONE
[2025-05-17 07:55:41] 2025-05-17 11:55:24,928 | INFO     | job 6652832286 has finished - writing final server update
[2025-05-17 07:55:41] 2025-05-17 11:55:24,928 | INFO     | total number of processed events: 400 (read)
[2025-05-17 07:55:41] 2025-05-17 11:55:24,943 | INFO     | executing command: lscpu
[2025-05-17 07:55:41] 2025-05-17 11:55:25,003 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-17 07:55:41] 2025-05-17 11:55:26,115 | INFO     | PID=3326524 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-17 07:55:41] 2025-05-17 11:55:26,116 | INFO     | .. there are 17 such processes running
[2025-05-17 07:55:41] 2025-05-17 11:55:27,192 | INFO     | monitor loop #441: job 0:6652832286 is in state 'finished'
[2025-05-17 07:55:41] 2025-05-17 11:55:27,193 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 07:55:41] 2025-05-17 11:55:28,751 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-17 07:55:41] 2025-05-17 11:55:28,751 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6652832286/memory_monitor_summary.json (trf name=prmon)
[2025-05-17 07:55:41] 2025-05-17 11:55:28,753 | INFO     | extracted standard info from prmon json
[2025-05-17 07:55:41] 2025-05-17 11:55:28,753 | INFO     | extracted standard memory fields from prmon json
[2025-05-17 07:55:41] 2025-05-17 11:55:28,753 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-17 07:55:41] 2025-05-17 11:55:28,753 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-17 07:55:41] 2025-05-17 11:55:28,753 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-17 07:55:41] 2025-05-17 11:55:28,756 | INFO     | fitting pss+swap vs Time
[2025-05-17 07:55:41] 2025-05-17 11:55:28,756 | INFO     | sum of square deviations: 233641590.0
[2025-05-17 07:55:41] 2025-05-17 11:55:28,757 | INFO     | sum of deviations: 10243790755.999998
[2025-05-17 07:55:41] 2025-05-17 11:55:28,757 | INFO     | mean x: 1747480047.0
[2025-05-17 07:55:41] 2025-05-17 11:55:28,757 | INFO     | mean y: 2199697.4285714286
[2025-05-17 07:55:41] 2025-05-17 11:55:28,757 | INFO     | -- intersect: -76614381929.811
[2025-05-17 07:55:41] 2025-05-17 11:55:28,757 | INFO     | intersect: -76614381929.811
[2025-05-17 07:55:41] 2025-05-17 11:55:28,757 | INFO     | chi2: 1.6538875345766322
[2025-05-17 07:55:41] 2025-05-17 11:55:28,758 | INFO     | -- intersect: -76614381929.811
[2025-05-17 07:55:41] 2025-05-17 11:55:28,758 | INFO     | current memory leak: 43.84 B/s (using 91 data points, chi2=1.65)
[2025-05-17 07:55:41] 2025-05-17 11:55:28,758 | INFO     | ..............................
[2025-05-17 07:55:41] 2025-05-17 11:55:28,758 | INFO     | . Timing measurements:
[2025-05-17 07:55:41] 2025-05-17 11:55:28,758 | INFO     | . get job = 0 s
[2025-05-17 07:55:41] 2025-05-17 11:55:28,759 | INFO     | . initial setup = 2 s
[2025-05-17 07:55:41] 2025-05-17 11:55:28,759 | INFO     | . payload setup = 6 s
[2025-05-17 07:55:41] 2025-05-17 11:55:28,759 | INFO     | . stage-in = 0 s
[2025-05-17 07:55:41] 2025-05-17 11:55:28,759 | INFO     | . payload execution = 5924 s
[2025-05-17 07:55:41] 2025-05-17 11:55:28,759 | INFO     | . stage-out = 0 s
[2025-05-17 07:55:41] 2025-05-17 11:55:28,759 | INFO     | . log creation = 0 s
[2025-05-17 07:55:41] 2025-05-17 11:55:28,759 | INFO     | ..............................
[2025-05-17 07:55:41] 2025-05-17 11:55:29,253 | INFO     | 
[2025-05-17 07:55:41] 2025-05-17 11:55:29,253 | INFO     | job summary report
[2025-05-17 07:55:41] 2025-05-17 11:55:29,253 | INFO     | --------------------------------------------------
[2025-05-17 07:55:41] 2025-05-17 11:55:29,253 | INFO     | PanDA job id: 6652832286
[2025-05-17 07:55:41] 2025-05-17 11:55:29,253 | INFO     | task id: 44638099
[2025-05-17 07:55:41] 2025-05-17 11:55:29,253 | INFO     | errors: (none)
[2025-05-17 07:55:41] 2025-05-17 11:55:29,253 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 07:55:41] 2025-05-17 11:55:29,253 | INFO     | pilot state: finished 
[2025-05-17 07:55:41] 2025-05-17 11:55:29,253 | INFO     | transexitcode: 0
[2025-05-17 07:55:41] 2025-05-17 11:55:29,254 | INFO     | exeerrorcode: 0
[2025-05-17 07:55:41] 2025-05-17 11:55:29,254 | INFO     | exeerrordiag: 
[2025-05-17 07:55:41] 2025-05-17 11:55:29,254 | INFO     | exitcode: 0
[2025-05-17 07:55:41] 2025-05-17 11:55:29,254 | INFO     | exitmsg: OK
[2025-05-17 07:55:41] 2025-05-17 11:55:29,254 | INFO     | cpuconsumptiontime: 43590 s
[2025-05-17 07:55:41] 2025-05-17 11:55:29,254 | INFO     | nevents: 400
[2025-05-17 07:55:41] 2025-05-17 11:55:29,254 | INFO     | neventsw: 0
[2025-05-17 07:55:41] 2025-05-17 11:55:29,254 | INFO     | pid: 3334014
[2025-05-17 07:55:41] 2025-05-17 11:55:29,254 | INFO     | pgrp: 3334014
[2025-05-17 07:55:41] 2025-05-17 11:55:29,254 | INFO     | corecount: 9
[2025-05-17 07:55:41] 2025-05-17 11:55:29,254 | INFO     | event service: False
[2025-05-17 07:55:41] 2025-05-17 11:55:29,254 | INFO     | sizes: {0: 2393541, 1: 2393740, 5: 2393946, 11: 2394002, 5933: 2420692, 5934: 2420691, 5936: 2429816, 5938: 2429872, 5942: 2430042}
[2025-05-17 07:55:41] 2025-05-17 11:55:29,254 | INFO     | --------------------------------------------------
[2025-05-17 07:55:41] 2025-05-17 11:55:29,254 | INFO     | 
[2025-05-17 07:55:41] 2025-05-17 11:55:29,254 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-05-17 07:55:41] 2025-05-17 11:55:29,272 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 07:55:41] 2025-05-17 11:55:29,273 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 07:55:41] 2025-05-17 11:55:29,273 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 07:55:41] 2025-05-17 11:55:29,273 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 07:55:41] 2025-05-17 11:55:29,273 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 07:55:41] 2025-05-17 11:55:29,273 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 07:55:41] 2025-05-17 11:55:29,273 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 07:55:41] 2025-05-17 11:55:29,273 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 07:55:41] 2025-05-17 11:55:29,273 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 07:55:41] 2025-05-17 11:55:29,273 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 07:55:41] 2025-05-17 11:55:29,273 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 07:55:41] 2025-05-17 11:55:29,274 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 07:55:41] 2025-05-17 11:55:29,274 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 07:55:41] 2025-05-17 11:55:29,274 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 07:55:41] 2025-05-17 11:55:29,274 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 07:55:41] 2025-05-17 11:55:29,274 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 07:55:41] 2025-05-17 11:55:29,274 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 07:55:41] 2025-05-17 11:55:29,274 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 07:55:41] 2025-05-17 11:55:29,274 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 07:55:41] 2025-05-17 11:55:29,274 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 07:55:41] 2025-05-17 11:55:29,274 | INFO     | job 6652832286 has completed (purged errors)
[2025-05-17 07:55:41] 2025-05-17 11:55:29,274 | INFO     | overall cleanup function is called
[2025-05-17 07:55:41] 2025-05-17 11:55:30,282 | INFO     | --- collectZombieJob: --- 10, [3334014]
[2025-05-17 07:55:41] 2025-05-17 11:55:30,283 | INFO     | zombie collector waiting for pid 3334014
[2025-05-17 07:55:41] 2025-05-17 11:55:30,283 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 07:55:41] 2025-05-17 11:55:30,283 | INFO     | collected zombie processes
[2025-05-17 07:55:41] 2025-05-17 11:55:30,283 | INFO     | will attempt to kill all subprocesses of pid=3334014
[2025-05-17 07:55:41] 2025-05-17 11:55:30,443 | INFO     | process IDs to be killed: [3334014] (in reverse order)
[2025-05-17 07:55:41] 2025-05-17 11:55:30,510 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 07:55:41] 2025-05-17 11:55:30,510 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 07:55:41] 2025-05-17 11:55:30,520 | INFO     | did not find any defunct processes belonging to 3334014
[2025-05-17 07:55:41] 2025-05-17 11:55:30,530 | INFO     | did not find any defunct processes belonging to 3334014
[2025-05-17 07:55:41] 2025-05-17 11:55:30,530 | INFO     | ready for new job
[2025-05-17 07:55:41] 2025-05-17 11:55:30,531 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 07:55:41] 2025-05-17 11:55:30,533 | INFO     | **************************************
[2025-05-17 07:55:41] 2025-05-17 11:55:30,533 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 07:55:41] 2025-05-17 11:55:30,533 | INFO     | **************************************
[2025-05-17 07:55:41] 2025-05-17 11:55:30,533 | INFO     | 
[2025-05-17 07:55:41] 2025-05-17 11:55:30,548 | INFO     | architecture information:
[2025-05-17 07:55:41] 2025-05-17 11:55:30,548 | INFO     | executing command: cat /etc/os-release
[2025-05-17 07:55:41] 2025-05-17 11:55:30,567 | INFO     | cat /etc/os-release:
[2025-05-17 07:55:41] NAME="CentOS Linux"
[2025-05-17 07:55:41] VERSION="7 (Core)"
[2025-05-17 07:55:41] ID="centos"
[2025-05-17 07:55:41] ID_LIKE="rhel fedora"
[2025-05-17 07:55:41] VERSION_ID="7"
[2025-05-17 07:55:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 07:55:41] ANSI_COLOR="0;31"
[2025-05-17 07:55:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 07:55:41] HOME_URL="https://www.centos.org/"
[2025-05-17 07:55:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 07:55:41] 
[2025-05-17 07:55:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 07:55:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 07:55:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 07:55:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 07:55:41] 
[2025-05-17 07:55:41] 2025-05-17 11:55:30,568 | INFO     | **************************************
[2025-05-17 07:55:41] 2025-05-17 11:55:31,071 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-05-17 07:55:41] 2025-05-17 11:55:31,086 | INFO     | sufficient remaining disk space (75127324672 B)
[2025-05-17 07:55:41] 2025-05-17 11:55:31,087 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 07:55:41] 2025-05-17 11:55:31,087 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 07:55:41] 2025-05-17 11:55:31,087 | INFO     | update_server=False
[2025-05-17 07:55:41] 2025-05-17 11:55:31,087 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 07:55:41] 2025-05-17 11:55:31,087 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 07:55:41] 2025-05-17 11:55:31,088 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 07:55:41] 2025-05-17 11:55:31,088 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-17 07:55:41] 2025-05-17 11:55:31,088 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 07:55:41] 2025-05-17 11:55:31,089 | INFO     | aborting loop
[2025-05-17 07:55:41] 2025-05-17 11:55:31,089 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 07:55:41] 2025-05-17 11:55:31,089 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 07:55:41] 2025-05-17 11:55:31,090 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 07:55:41] 2025-05-17 11:55:31,939 | INFO     | all payload control threads have been joined
[2025-05-17 07:55:41] 2025-05-17 11:55:32,054 | INFO     | all data control threads have been joined
[2025-05-17 07:55:41] 2025-05-17 11:55:32,092 | INFO     | [job] retrieve thread has finished
[2025-05-17 07:55:41] 2025-05-17 11:55:32,095 | INFO     | [job] job monitor thread has finished
[2025-05-17 07:55:41] 2025-05-17 11:55:32,120 | INFO     | all job control threads have been joined
[2025-05-17 07:55:41] 2025-05-17 11:55:32,534 | INFO     | [payload] failed_post thread has finished
[2025-05-17 07:55:41] 2025-05-17 11:55:32,580 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 07:55:41] 2025-05-17 11:55:32,767 | INFO     | [data] copytool_in thread has finished
[2025-05-17 07:55:41] 2025-05-17 11:55:32,940 | INFO     | [payload] control thread has finished
[2025-05-17 07:55:41] 2025-05-17 11:55:33,059 | INFO     | [data] control thread has finished
[2025-05-17 07:55:41] 2025-05-17 11:55:33,094 | INFO     | [data] copytool_out thread has finished
[2025-05-17 07:55:41] 2025-05-17 11:55:33,125 | INFO     | [job] control thread has finished
[2025-05-17 07:55:41] 2025-05-17 11:55:33,153 | INFO     | [payload] validate_post thread has finished
[2025-05-17 07:55:41] 2025-05-17 11:55:33,181 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 07:55:41] 2025-05-17 11:55:33,252 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 07:55:41] 2025-05-17 11:55:33,524 | INFO     | [job] validate thread has finished
[2025-05-17 07:55:41] 2025-05-17 11:55:33,583 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 07:55:41] 2025-05-17 11:55:33,861 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 07:55:41] 2025-05-17 11:55:34,866 | INFO     | [job] queue monitor thread has finished
[2025-05-17 07:55:41] 2025-05-17 11:55:35,095 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 07:55:41] 2025-05-17 11:55:36,646 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140358452369216)>', '<ExcThread(monitor, started 140357937370880)>']
[2025-05-17 07:55:41] 2025-05-17 11:55:37,117 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 07:55:41] 2025-05-17 11:55:37,118 | INFO     | [monitor] control thread has ended
[2025-05-17 07:55:41] 2025-05-17 11:55:41,648 | INFO     | all workflow threads have been joined
[2025-05-17 07:55:41] 2025-05-17 11:55:41,648 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 07:55:41] 2025-05-17 11:55:41,649 | INFO     | traces error code: 0
[2025-05-17 07:55:41] 2025-05-17 11:55:41,649 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 07:55:41] 2025-05-17 11:55:41,822 [wrapper] ==== pilot stdout END ====
[2025-05-17 07:55:41] 2025-05-17 11:55:41,825 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 07:55:41] 2025-05-17 11:55:41,828 [wrapper] pilotpid: 3326524
[2025-05-17 07:55:41] 2025-05-17 11:55:41,830 [wrapper] Pilot exit status: 0
[2025-05-17 07:55:41] 2025-05-17 11:55:41,839 [wrapper] pandaids: 6652832286
[2025-05-17 07:55:41] 2025-05-17 11:55:41,897 [wrapper] cleanup supervisor_pilot 3695707 3326525
[2025-05-17 07:55:41] 2025-05-17 11:55:41,900 [wrapper] Test setup, not cleaning
[2025-05-17 07:55:41] 2025-05-17 11:55:41,902 [wrapper] apfmon messages muted
[2025-05-17 07:55:41] 2025-05-17 11:55:41,905 [wrapper] ==== wrapper stdout END ====
[2025-05-17 07:55:41] 2025-05-17 11:55:41,907 [wrapper] ==== wrapper stderr END ====
[2025-05-17 07:55:41]  *** Error codes and diagnostics ***
[2025-05-17 07:55:41]     "exeErrorCode": 0,
[2025-05-17 07:55:41]     "exeErrorDiag": "",
[2025-05-17 07:55:41]     "pilotErrorCode": 0,
[2025-05-17 07:55:41]     "pilotErrorDiag": "",
[2025-05-17 07:55:41]  *** Listing of results directory ***
[2025-05-17 07:55:41] total 421832
[2025-05-17 07:55:41] -rw-r--r--. 1 boincer umatlas    495897 May 17 00:05 pilot3.tar.gz
[2025-05-17 07:55:41] -rw-r--r--. 1 boincer umatlas      5111 May 17 00:10 queuedata.json
[2025-05-17 07:55:41] -rwx------. 1 boincer umatlas     37140 May 17 00:12 runpilot2-wrapper.sh
[2025-05-17 07:55:41] -rw-r--r--. 1 boincer umatlas       100 May 17 06:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 07:55:41] -rwxr-xr-x. 1 boincer umatlas      7986 May 17 06:15 run_atlas
[2025-05-17 07:55:41] -rw-r--r--. 1 boincer umatlas       105 May 17 06:15 job.xml
[2025-05-17 07:55:41] -rw-r--r--. 2 boincer umatlas 223124094 May 17 06:15 EVNT.44638096._002000.pool.root.1
[2025-05-17 07:55:41] -rw-r--r--. 2 boincer umatlas     17569 May 17 06:15 start_atlas.sh
[2025-05-17 07:55:41] drwxrwx--x. 2 boincer umatlas      4096 May 17 06:15 shared
[2025-05-17 07:55:41] -rw-r--r--. 2 boincer umatlas    508875 May 17 06:15 input.tar.gz
[2025-05-17 07:55:41] -rw-r--r--. 1 boincer umatlas         0 May 17 06:15 boinc_lockfile
[2025-05-17 07:55:41] -rw-r--r--. 1 boincer umatlas      2539 May 17 06:15 pandaJob.out
[2025-05-17 07:55:41] -rw-------. 1 boincer umatlas       467 May 17 06:16 setup.sh.local
[2025-05-17 07:55:41] -rw-------. 1 boincer umatlas    994635 May 17 06:16 agis_schedconf.cvmfs.json
[2025-05-17 07:55:41] -rw-------. 1 boincer umatlas   1596741 May 17 06:16 agis_ddmendpoints.agis.ALL.json
[2025-05-17 07:55:41] drwx------. 4 boincer umatlas      4096 May 17 06:16 pilot3
[2025-05-17 07:55:41] -rw-r--r--. 1 boincer umatlas      6841 May 17 07:49 init_data.xml
[2025-05-17 07:55:41] -rw-------. 1 boincer umatlas 203163497 May 17 07:54 HITS.44638099._049869.pool.root.1
[2025-05-17 07:55:41] -rw-r--r--. 1 boincer umatlas       529 May 17 07:54 boinc_task_state.xml
[2025-05-17 07:55:41] -rw-------. 1 boincer umatlas        95 May 17 07:54 pilot_heartbeat.json
[2025-05-17 07:55:41] -rw-------. 1 boincer umatlas      1036 May 17 07:55 memory_monitor_summary.json
[2025-05-17 07:55:41] -rw-------. 1 boincer umatlas    338433 May 17 07:55 log.44638099._049869.job.log.tgz.1
[2025-05-17 07:55:41] -rw-------. 1 boincer umatlas      7714 May 17 07:55 heartbeat.json
[2025-05-17 07:55:41] -rw-r--r--. 1 boincer umatlas      8192 May 17 07:55 boinc_mmap_file
[2025-05-17 07:55:41] -rw-r--r--. 1 boincer umatlas        27 May 17 07:55 wrapper_checkpoint.txt
[2025-05-17 07:55:41] -rw-------. 1 boincer umatlas      4476 May 17 07:55 pilotlog.txt
[2025-05-17 07:55:41] -rw-------. 1 boincer umatlas    574464 May 17 07:55 log.44638099._049869.job.log.1
[2025-05-17 07:55:41] -rw-------. 1 boincer umatlas       357 May 17 07:55 output.list
[2025-05-17 07:55:41] -rw-r--r--. 1 boincer umatlas       620 May 17 07:55 runtime_log
[2025-05-17 07:55:41] -rw-------. 1 boincer umatlas    931840 May 17 07:55 result.tar.gz
[2025-05-17 07:55:41] -rw-r--r--. 1 boincer umatlas     11423 May 17 07:55 runtime_log.err
[2025-05-17 07:55:41] -rw-------. 1 boincer umatlas       654 May 17 07:55 8fHKDmL5Na7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7eNKDmILabXo.diag
[2025-05-17 07:55:41] -rw-r--r--. 1 boincer umatlas     21410 May 17 07:55 stderr.txt
[2025-05-17 07:55:41] HITS file was successfully produced:
[2025-05-17 07:55:41] -rw-------. 1 boincer umatlas 203163497 May 17 07:54 shared/HITS.pool.root.1
[2025-05-17 07:55:41]  *** Contents of shared directory: ***
[2025-05-17 07:55:41] total 417736
[2025-05-17 07:55:41] -rw-r--r--. 2 boincer umatlas 223124094 May 17 06:15 ATLAS.root_0
[2025-05-17 07:55:41] -rw-r--r--. 2 boincer umatlas     17569 May 17 06:15 start_atlas.sh
[2025-05-17 07:55:41] -rw-r--r--. 2 boincer umatlas    508875 May 17 06:15 input.tar.gz
[2025-05-17 07:55:41] -rw-------. 1 boincer umatlas 203163497 May 17 07:54 HITS.pool.root.1
[2025-05-17 07:55:41] -rw-------. 1 boincer umatlas    931840 May 17 07:55 result.tar.gz
07:55:43 (3321981): run_atlas exited; CPU time 43728.842766
07:55:43 (3321981): called boinc_finish(0)

</stderr_txt>
]]>

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