Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:30:28 (3141764): wrapper (7.7.26015): starting
05:30:28 (3141764): wrapper: running run_atlas (--nthreads 8)
[2025-05-17 05:30:28] Arguments: --nthreads 8
[2025-05-17 05:30:28] Threads: 8
[2025-05-17 05:30:28] Checking for CVMFS
[2025-05-17 05:30:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 05:30:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 05:30:28] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 05:30:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 05:30:29] 2.12.6.0 11692 5243 178936 146096 0 218 32291738 40960001 44517 16776704 0 53365986 99.713 46418759 40728 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-17 05:30:29] CVMFS is ok
[2025-05-17 05:30:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-17 05:30:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-17 05:30:29] Further information can be found at the LHC@home message board.
[2025-05-17 05:30:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 05:30:29] Checking for apptainer binary...
[2025-05-17 05:30:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 05:30:29] Running /usr/bin/apptainer --version
[2025-05-17 05:30:29] apptainer version 1.4.0-1.el9
[2025-05-17 05:30:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 05:30:30] c8-7-3.aglt2.org
[2025-05-17 05:30:30] apptainer works
[2025-05-17 05:30:30] Set ATHENA_PROC_NUMBER=8
[2025-05-17 05:30:30] Set ATHENA_CORE_NUMBER=8
[2025-05-17 05:30:30] Starting ATLAS job with PandaID=6653394772
[2025-05-17 05:30:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 07:09:59]  *** The last 200 lines of the pilot log: ***
[2025-05-17 07:09:59]  status_code=0
[2025-05-17 07:09:59]  storage_token=
[2025-05-17 07:09:59]  surl=/tmp/boinchome/slots/7/PanDA_Pilot-6653394772/log.44638099._051651.job.log.tgz.1
[2025-05-17 07:09:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cb/88/log.44638099._051651.job.log.tgz.1
[2025-05-17 07:09:59]  workdir=None
[2025-05-17 07:09:59] ]
[2025-05-17 07:09:59] 2025-05-17 11:09:20,088 | INFO     | transferring file log.44638099._051651.job.log.tgz.1 from /tmp/boinchome/slots/7/PanDA_Pilot-6653394772/log.44638099._051651.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-05-17 07:09:59] 2025-05-17 11:09:20,088 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/7/PanDA_Pilot-6653394772/log.44638099._051651.job.log.tgz.1 /tmp/boinchome/slots/7/log.44638099._051651.job
[2025-05-17 07:09:59] 2025-05-17 11:09:20,115 | INFO     | PID=3155971 has CPU usage=14.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-05-17 07:09:59] 2025-05-17 11:09:20,115 | INFO     | .. there are 71 such processes running
[2025-05-17 07:09:59] 2025-05-17 11:09:20,128 | INFO     | adding to output.list: log.44638099._051651.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cb/88/log.44638099._051651.job.log.tg
[2025-05-17 07:09:59] 2025-05-17 11:09:20,128 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-17 07:09:59] 2025-05-17 11:09:20,130 | INFO     | summary of transferred files:
[2025-05-17 07:09:59] 2025-05-17 11:09:20,130 | INFO     |  -- lfn=log.44638099._051651.job.log.tgz.1, status_code=0, status=transferred
[2025-05-17 07:09:59] 2025-05-17 11:09:20,130 | INFO     | stage-out finished correctly
[2025-05-17 07:09:59] 2025-05-17 11:09:20,796 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-17 07:09:59] 2025-05-17 11:09:21,364 | INFO     | monitor loop #385: job 0:6653394772 is in state 'finished'
[2025-05-17 07:09:59] 2025-05-17 11:09:21,364 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 07:09:59] 2025-05-17 11:09:23,091 | INFO     | job 6653394772 has state=finished
[2025-05-17 07:09:59] 2025-05-17 11:09:23,091 | INFO     | preparing for final server update for job 6653394772 in state='finished'
[2025-05-17 07:09:59] 2025-05-17 11:09:23,092 | INFO     | this job has now completed (state=finished)
[2025-05-17 07:09:59] 2025-05-17 11:09:23,092 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-17 07:09:59] 2025-05-17 11:09:23,092 | INFO     | log transfer has been attempted: DONE
[2025-05-17 07:09:59] 2025-05-17 11:09:23,092 | INFO     | job 6653394772 has finished - writing final server update
[2025-05-17 07:09:59] 2025-05-17 11:09:23,092 | INFO     | total number of processed events: 400 (read)
[2025-05-17 07:09:59] 2025-05-17 11:09:23,115 | INFO     | executing command: lscpu
[2025-05-17 07:09:59] 2025-05-17 11:09:23,360 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-17 07:09:59] 2025-05-17 11:09:23,895 | INFO     | monitor loop #386: job 0:6653394772 is in state 'finished'
[2025-05-17 07:09:59] 2025-05-17 11:09:23,896 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 07:09:59] 2025-05-17 11:09:26,400 | INFO     | monitor loop #387: job 0:6653394772 is in state 'finished'
[2025-05-17 07:09:59] 2025-05-17 11:09:26,400 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 07:09:59] 2025-05-17 11:09:28,905 | INFO     | monitor loop #388: job 0:6653394772 is in state 'finished'
[2025-05-17 07:09:59] 2025-05-17 11:09:28,906 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 07:09:59] 2025-05-17 11:09:31,410 | INFO     | monitor loop #389: job 0:6653394772 is in state 'finished'
[2025-05-17 07:09:59] 2025-05-17 11:09:31,412 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 07:09:59] 2025-05-17 11:09:33,919 | INFO     | monitor loop #390: job 0:6653394772 is in state 'finished'
[2025-05-17 07:09:59] 2025-05-17 11:09:33,919 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 07:09:59] 2025-05-17 11:09:36,427 | INFO     | monitor loop #391: job 0:6653394772 is in state 'finished'
[2025-05-17 07:09:59] 2025-05-17 11:09:36,427 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 07:09:59] 2025-05-17 11:09:37,879 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-17 07:09:59] 2025-05-17 11:09:37,879 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6653394772/memory_monitor_summary.json (trf name=prmon)
[2025-05-17 07:09:59] 2025-05-17 11:09:37,880 | INFO     | extracted standard info from prmon json
[2025-05-17 07:09:59] 2025-05-17 11:09:37,880 | INFO     | extracted standard memory fields from prmon json
[2025-05-17 07:09:59] 2025-05-17 11:09:37,880 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-17 07:09:59] 2025-05-17 11:09:37,887 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-17 07:09:59] 2025-05-17 11:09:37,887 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-17 07:09:59] 2025-05-17 11:09:37,895 | INFO     | fitting pss+swap vs Time
[2025-05-17 07:09:59] 2025-05-17 11:09:37,897 | INFO     | sum of square deviations: 204190554.43678126
[2025-05-17 07:09:59] 2025-05-17 11:09:37,898 | INFO     | sum of deviations: 15659066356.390808
[2025-05-17 07:09:59] 2025-05-17 11:09:37,898 | INFO     | mean x: 1747477364.0804598
[2025-05-17 07:09:59] 2025-05-17 11:09:37,898 | INFO     | mean y: 2098531.2298850575
[2025-05-17 07:09:59] 2025-05-17 11:09:37,898 | INFO     | -- intersect: -134009310938.2461
[2025-05-17 07:09:59] 2025-05-17 11:09:37,898 | INFO     | intersect: -134009310938.2461
[2025-05-17 07:09:59] 2025-05-17 11:09:37,898 | INFO     | chi2: 1.9738399182364226
[2025-05-17 07:09:59] 2025-05-17 11:09:37,898 | INFO     | -- intersect: -134009310938.2461
[2025-05-17 07:09:59] 2025-05-17 11:09:37,898 | INFO     | current memory leak: 76.69 B/s (using 87 data points, chi2=1.97)
[2025-05-17 07:09:59] 2025-05-17 11:09:37,899 | INFO     | ..............................
[2025-05-17 07:09:59] 2025-05-17 11:09:37,899 | INFO     | . Timing measurements:
[2025-05-17 07:09:59] 2025-05-17 11:09:37,899 | INFO     | . get job = 0 s
[2025-05-17 07:09:59] 2025-05-17 11:09:37,899 | INFO     | . initial setup = 8 s
[2025-05-17 07:09:59] 2025-05-17 11:09:37,899 | INFO     | . payload setup = 48 s
[2025-05-17 07:09:59] 2025-05-17 11:09:37,899 | INFO     | . stage-in = 0 s
[2025-05-17 07:09:59] 2025-05-17 11:09:37,899 | INFO     | . payload execution = 5751 s
[2025-05-17 07:09:59] 2025-05-17 11:09:37,899 | INFO     | . stage-out = 0 s
[2025-05-17 07:09:59] 2025-05-17 11:09:37,899 | INFO     | . log creation = 0 s
[2025-05-17 07:09:59] 2025-05-17 11:09:37,899 | INFO     | ..............................
[2025-05-17 07:09:59] 2025-05-17 11:09:38,070 | INFO     | 
[2025-05-17 07:09:59] 2025-05-17 11:09:38,071 | INFO     | job summary report
[2025-05-17 07:09:59] 2025-05-17 11:09:38,071 | INFO     | --------------------------------------------------
[2025-05-17 07:09:59] 2025-05-17 11:09:38,071 | INFO     | PanDA job id: 6653394772
[2025-05-17 07:09:59] 2025-05-17 11:09:38,071 | INFO     | task id: 44638099
[2025-05-17 07:09:59] 2025-05-17 11:09:38,071 | INFO     | errors: (none)
[2025-05-17 07:09:59] 2025-05-17 11:09:38,071 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 07:09:59] 2025-05-17 11:09:38,071 | INFO     | pilot state: finished 
[2025-05-17 07:09:59] 2025-05-17 11:09:38,071 | INFO     | transexitcode: 0
[2025-05-17 07:09:59] 2025-05-17 11:09:38,071 | INFO     | exeerrorcode: 0
[2025-05-17 07:09:59] 2025-05-17 11:09:38,071 | INFO     | exeerrordiag: 
[2025-05-17 07:09:59] 2025-05-17 11:09:38,071 | INFO     | exitcode: 0
[2025-05-17 07:09:59] 2025-05-17 11:09:38,071 | INFO     | exitmsg: OK
[2025-05-17 07:09:59] 2025-05-17 11:09:38,071 | INFO     | cpuconsumptiontime: 28566 s
[2025-05-17 07:09:59] 2025-05-17 11:09:38,071 | INFO     | nevents: 400
[2025-05-17 07:09:59] 2025-05-17 11:09:38,071 | INFO     | neventsw: 0
[2025-05-17 07:09:59] 2025-05-17 11:09:38,071 | INFO     | pid: 3188313
[2025-05-17 07:09:59] 2025-05-17 11:09:38,071 | INFO     | pgrp: 3188313
[2025-05-17 07:09:59] 2025-05-17 11:09:38,071 | INFO     | corecount: 8
[2025-05-17 07:09:59] 2025-05-17 11:09:38,071 | INFO     | event service: False
[2025-05-17 07:09:59] 2025-05-17 11:09:38,071 | INFO     | sizes: {0: 2392885, 1: 2393570, 2: 2393769, 13: 2393769, 23: 2393825, 34: 2394215, 5804: 2420734, 5805: 2429675, 5806: 2429731, 5823: 2429901}
[2025-05-17 07:09:59] 2025-05-17 11:09:38,071 | INFO     | --------------------------------------------------
[2025-05-17 07:09:59] 2025-05-17 11:09:38,071 | INFO     | 
[2025-05-17 07:09:59] 2025-05-17 11:09:38,071 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-05-17 07:09:59] 2025-05-17 11:09:38,105 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 07:09:59] 2025-05-17 11:09:38,105 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 07:09:59] 2025-05-17 11:09:38,105 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 07:09:59] 2025-05-17 11:09:38,105 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 07:09:59] 2025-05-17 11:09:38,105 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 07:09:59] 2025-05-17 11:09:38,105 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 07:09:59] 2025-05-17 11:09:38,105 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 07:09:59] 2025-05-17 11:09:38,105 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 07:09:59] 2025-05-17 11:09:38,106 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 07:09:59] 2025-05-17 11:09:38,106 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 07:09:59] 2025-05-17 11:09:38,106 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 07:09:59] 2025-05-17 11:09:38,106 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 07:09:59] 2025-05-17 11:09:38,106 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 07:09:59] 2025-05-17 11:09:38,106 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 07:09:59] 2025-05-17 11:09:38,106 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 07:09:59] 2025-05-17 11:09:38,106 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 07:09:59] 2025-05-17 11:09:38,110 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 07:09:59] 2025-05-17 11:09:38,110 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 07:09:59] 2025-05-17 11:09:38,110 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 07:09:59] 2025-05-17 11:09:38,110 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 07:09:59] 2025-05-17 11:09:38,110 | INFO     | job 6653394772 has completed (purged errors)
[2025-05-17 07:09:59] 2025-05-17 11:09:38,110 | INFO     | overall cleanup function is called
[2025-05-17 07:09:59] 2025-05-17 11:09:39,123 | INFO     | --- collectZombieJob: --- 10, [3188313]
[2025-05-17 07:09:59] 2025-05-17 11:09:39,123 | INFO     | zombie collector waiting for pid 3188313
[2025-05-17 07:09:59] 2025-05-17 11:09:39,124 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 07:09:59] 2025-05-17 11:09:39,124 | INFO     | collected zombie processes
[2025-05-17 07:09:59] 2025-05-17 11:09:39,124 | INFO     | will attempt to kill all subprocesses of pid=3188313
[2025-05-17 07:09:59] 2025-05-17 11:09:39,991 | INFO     | process IDs to be killed: [3188313] (in reverse order)
[2025-05-17 07:09:59] 2025-05-17 11:09:40,259 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 07:09:59] 2025-05-17 11:09:40,259 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 07:09:59] 2025-05-17 11:09:40,289 | INFO     | did not find any defunct processes belonging to 3188313
[2025-05-17 07:09:59] 2025-05-17 11:09:40,317 | INFO     | did not find any defunct processes belonging to 3188313
[2025-05-17 07:09:59] 2025-05-17 11:09:40,317 | INFO     | ready for new job
[2025-05-17 07:09:59] 2025-05-17 11:09:40,317 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 07:09:59] 2025-05-17 11:09:40,318 | INFO     | **************************************
[2025-05-17 07:09:59] 2025-05-17 11:09:40,318 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 07:09:59] 2025-05-17 11:09:40,319 | INFO     | **************************************
[2025-05-17 07:09:59] 2025-05-17 11:09:40,319 | INFO     | 
[2025-05-17 07:09:59] 2025-05-17 11:09:40,338 | INFO     | architecture information:
[2025-05-17 07:09:59] 2025-05-17 11:09:40,340 | INFO     | executing command: cat /etc/os-release
[2025-05-17 07:09:59] 2025-05-17 11:09:40,367 | INFO     | cat /etc/os-release:
[2025-05-17 07:09:59] NAME="CentOS Linux"
[2025-05-17 07:09:59] VERSION="7 (Core)"
[2025-05-17 07:09:59] ID="centos"
[2025-05-17 07:09:59] ID_LIKE="rhel fedora"
[2025-05-17 07:09:59] VERSION_ID="7"
[2025-05-17 07:09:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 07:09:59] ANSI_COLOR="0;31"
[2025-05-17 07:09:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 07:09:59] HOME_URL="https://www.centos.org/"
[2025-05-17 07:09:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 07:09:59] 
[2025-05-17 07:09:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 07:09:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 07:09:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 07:09:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 07:09:59] 
[2025-05-17 07:09:59] 2025-05-17 11:09:40,367 | INFO     | **************************************
[2025-05-17 07:09:59] 2025-05-17 11:09:40,870 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-05-17 07:09:59] 2025-05-17 11:09:40,901 | INFO     | sufficient remaining disk space (169585147904 B)
[2025-05-17 07:09:59] 2025-05-17 11:09:40,901 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 07:09:59] 2025-05-17 11:09:40,901 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 07:09:59] 2025-05-17 11:09:40,901 | INFO     | update_server=False
[2025-05-17 07:09:59] 2025-05-17 11:09:40,902 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 07:09:59] 2025-05-17 11:09:40,902 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 07:09:59] 2025-05-17 11:09:40,902 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 07:09:59] 2025-05-17 11:09:40,902 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 07:09:59] 2025-05-17 11:09:40,903 | INFO     | aborting loop
[2025-05-17 07:09:59] 2025-05-17 11:09:40,903 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-17 07:09:59] 2025-05-17 11:09:40,904 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 07:09:59] 2025-05-17 11:09:40,904 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 07:09:59] 2025-05-17 11:09:40,904 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 07:09:59] 2025-05-17 11:09:41,777 | INFO     | all data control threads have been joined
[2025-05-17 07:09:59] 2025-05-17 11:09:41,909 | INFO     | [job] job monitor thread has finished
[2025-05-17 07:09:59] 2025-05-17 11:09:41,913 | INFO     | [job] retrieve thread has finished
[2025-05-17 07:09:59] 2025-05-17 11:09:42,141 | INFO     | all payload control threads have been joined
[2025-05-17 07:09:59] 2025-05-17 11:09:42,258 | INFO     | [payload] failed_post thread has finished
[2025-05-17 07:09:59] 2025-05-17 11:09:42,480 | INFO     | all job control threads have been joined
[2025-05-17 07:09:59] 2025-05-17 11:09:42,782 | INFO     | [payload] validate_post thread has finished
[2025-05-17 07:09:59] 2025-05-17 11:09:42,783 | INFO     | [data] control thread has finished
[2025-05-17 07:09:59] 2025-05-17 11:09:42,836 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 07:09:59] 2025-05-17 11:09:42,910 | INFO     | [data] copytool_out thread has finished
[2025-05-17 07:09:59] 2025-05-17 11:09:42,930 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 07:09:59] 2025-05-17 11:09:43,084 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 07:09:59] 2025-05-17 11:09:43,147 | INFO     | [payload] control thread has finished
[2025-05-17 07:09:59] 2025-05-17 11:09:43,213 | INFO     | [job] validate thread has finished
[2025-05-17 07:09:59] 2025-05-17 11:09:43,225 | INFO     | [data] copytool_in thread has finished
[2025-05-17 07:09:59] 2025-05-17 11:09:43,226 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 07:09:59] 2025-05-17 11:09:43,485 | INFO     | [job] control thread has finished
[2025-05-17 07:09:59] 2025-05-17 11:09:44,090 | INFO     | [job] queue monitor thread has finished
[2025-05-17 07:09:59] 2025-05-17 11:09:44,910 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 07:09:59] 2025-05-17 11:09:51,875 | INFO     | job.realtimelogging is not enabled
[2025-05-17 07:09:59] 2025-05-17 11:09:52,891 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 07:09:59] 2025-05-17 11:09:53,204 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140326444562240)>', '<ExcThread(monitor, started 140325574145792)>']
[2025-05-17 07:09:59] 2025-05-17 11:09:53,980 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 07:09:59] 2025-05-17 11:09:53,981 | INFO     | [monitor] control thread has ended
[2025-05-17 07:09:59] 2025-05-17 11:09:58,232 | INFO     | all workflow threads have been joined
[2025-05-17 07:09:59] 2025-05-17 11:09:58,232 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 07:09:59] 2025-05-17 11:09:58,233 | INFO     | traces error code: 0
[2025-05-17 07:09:59] 2025-05-17 11:09:58,233 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 07:09:59] 2025-05-17 11:09:58,441 [wrapper] ==== pilot stdout END ====
[2025-05-17 07:09:59] 2025-05-17 11:09:58,453 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 07:09:59] 2025-05-17 11:09:58,467 [wrapper] pilotpid: 3155971
[2025-05-17 07:09:59] 2025-05-17 11:09:58,471 [wrapper] Pilot exit status: 0
[2025-05-17 07:09:59] 2025-05-17 11:09:58,518 [wrapper] pandaids: 6653394772
[2025-05-17 07:09:59] 2025-05-17 11:09:58,688 [wrapper] cleanup supervisor_pilot  589271 3155972
[2025-05-17 07:09:59] 2025-05-17 11:09:58,708 [wrapper] Test setup, not cleaning
[2025-05-17 07:09:59] 2025-05-17 11:09:58,748 [wrapper] apfmon messages muted
[2025-05-17 07:09:59] 2025-05-17 11:09:58,754 [wrapper] ==== wrapper stdout END ====
[2025-05-17 07:09:59] 2025-05-17 11:09:58,764 [wrapper] ==== wrapper stderr END ====
[2025-05-17 07:09:59]  *** Error codes and diagnostics ***
[2025-05-17 07:09:59]     "exeErrorCode": 0,
[2025-05-17 07:09:59]     "exeErrorDiag": "",
[2025-05-17 07:09:59]     "pilotErrorCode": 0,
[2025-05-17 07:09:59]     "pilotErrorDiag": "",
[2025-05-17 07:09:59]  *** Listing of results directory ***
[2025-05-17 07:09:59] total 408464
[2025-05-17 07:09:59] -rw-r--r--. 1 boincer umatlas    495897 May 17 02:32 pilot3.tar.gz
[2025-05-17 07:09:59] -rw-r--r--. 1 boincer umatlas      5111 May 17 02:49 queuedata.json
[2025-05-17 07:09:59] -rwx------. 1 boincer umatlas     37140 May 17 02:50 runpilot2-wrapper.sh
[2025-05-17 07:09:59] -rw-r--r--. 1 boincer umatlas       100 May 17 05:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 07:09:59] -rwxr-xr-x. 1 boincer umatlas      7986 May 17 05:30 run_atlas
[2025-05-17 07:09:59] -rw-r--r--. 1 boincer umatlas       105 May 17 05:30 job.xml
[2025-05-17 07:09:59] -rw-r--r--. 2 boincer umatlas 224281399 May 17 05:30 EVNT.44638096._002065.pool.root.1
[2025-05-17 07:09:59] -rw-r--r--. 2 boincer umatlas     17569 May 17 05:30 start_atlas.sh
[2025-05-17 07:09:59] drwxrwx--x. 2 boincer umatlas      4096 May 17 05:30 shared
[2025-05-17 07:09:59] -rw-r--r--. 2 boincer umatlas    508879 May 17 05:30 input.tar.gz
[2025-05-17 07:09:59] -rw-r--r--. 1 boincer umatlas         0 May 17 05:30 boinc_lockfile
[2025-05-17 07:09:59] -rw-r--r--. 1 boincer umatlas      2540 May 17 05:30 pandaJob.out
[2025-05-17 07:09:59] -rw-------. 1 boincer umatlas       467 May 17 05:30 setup.sh.local
[2025-05-17 07:09:59] -rw-------. 1 boincer umatlas    994635 May 17 05:31 agis_schedconf.cvmfs.json
[2025-05-17 07:09:59] -rw-------. 1 boincer umatlas   1596741 May 17 05:31 agis_ddmendpoints.agis.ALL.json
[2025-05-17 07:09:59] drwx------. 4 boincer umatlas      4096 May 17 05:31 pilot3
[2025-05-17 07:09:59] -rw-r--r--. 1 boincer umatlas      7160 May 17 07:00 init_data.xml
[2025-05-17 07:09:59] -rw-------. 1 boincer umatlas 188440264 May 17 07:08 HITS.44638099._051651.pool.root.1
[2025-05-17 07:09:59] -rw-r--r--. 1 boincer umatlas       529 May 17 07:08 boinc_task_state.xml
[2025-05-17 07:09:59] -rw-------. 1 boincer umatlas      1033 May 17 07:09 memory_monitor_summary.json
[2025-05-17 07:09:59] -rw-------. 1 boincer umatlas        95 May 17 07:09 pilot_heartbeat.json
[2025-05-17 07:09:59] -rw-------. 1 boincer umatlas    328047 May 17 07:09 log.44638099._051651.job.log.tgz.1
[2025-05-17 07:09:59] -rw-------. 1 boincer umatlas      7693 May 17 07:09 heartbeat.json
[2025-05-17 07:09:59] -rw-r--r--. 1 boincer umatlas        27 May 17 07:09 wrapper_checkpoint.txt
[2025-05-17 07:09:59] -rw-r--r--. 1 boincer umatlas      8192 May 17 07:09 boinc_mmap_file
[2025-05-17 07:09:59] -rw-------. 1 boincer umatlas      4549 May 17 07:09 pilotlog.txt
[2025-05-17 07:09:59] -rw-------. 1 boincer umatlas    523868 May 17 07:09 log.44638099._051651.job.log.1
[2025-05-17 07:09:59] -rw-------. 1 boincer umatlas       357 May 17 07:09 output.list
[2025-05-17 07:09:59] -rw-r--r--. 1 boincer umatlas       620 May 17 07:09 runtime_log
[2025-05-17 07:09:59] -rw-------. 1 boincer umatlas    870400 May 17 07:09 result.tar.gz
[2025-05-17 07:09:59] -rw-r--r--. 1 boincer umatlas     11408 May 17 07:09 runtime_log.err
[2025-05-17 07:09:59] -rw-------. 1 boincer umatlas       650 May 17 07:09 o9dLDm5XQa7n9Rq4apOajLDm4fhM0noT9bVof3QYDmG7JKDmUQUd8n.diag
[2025-05-17 07:09:59] -rw-r--r--. 1 boincer umatlas     22213 May 17 07:09 stderr.txt
[2025-05-17 07:09:59] HITS file was successfully produced:
[2025-05-17 07:09:59] -rw-------. 1 boincer umatlas 188440264 May 17 07:08 shared/HITS.pool.root.1
[2025-05-17 07:09:59]  *** Contents of shared directory: ***
[2025-05-17 07:09:59] total 404428
[2025-05-17 07:09:59] -rw-r--r--. 2 boincer umatlas 224281399 May 17 05:30 ATLAS.root_0
[2025-05-17 07:09:59] -rw-r--r--. 2 boincer umatlas     17569 May 17 05:30 start_atlas.sh
[2025-05-17 07:09:59] -rw-r--r--. 2 boincer umatlas    508879 May 17 05:30 input.tar.gz
[2025-05-17 07:09:59] -rw-------. 1 boincer umatlas 188440264 May 17 07:08 HITS.pool.root.1
[2025-05-17 07:09:59] -rw-------. 1 boincer umatlas    870400 May 17 07:09 result.tar.gz
07:10:00 (3141764): run_atlas exited; CPU time 28782.505200
07:10:00 (3141764): called boinc_finish(0)

</stderr_txt>
]]>

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