Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:22:59 (3771899): wrapper (7.7.26015): starting
04:22:59 (3771899): wrapper: running run_atlas (--nthreads 8)
[2025-05-17 04:22:59] Arguments: --nthreads 8
[2025-05-17 04:22:59] Threads: 8
[2025-05-17 04:22:59] Checking for CVMFS
[2025-05-17 04:22:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 04:22:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 04:22:59] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 04:23:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 04:23:00] 2.12.6.0 9719 10888 280560 146094 2 188 18323814 32935936 19430 16776704 0 36704642 99.451 54036642 26720 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-17 04:23:00] CVMFS is ok
[2025-05-17 04:23:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-17 04:23:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-17 04:23:00] Further information can be found at the LHC@home message board.
[2025-05-17 04:23:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 04:23:00] Checking for apptainer binary...
[2025-05-17 04:23:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 04:23:00] Running /usr/bin/apptainer --version
[2025-05-17 04:23:00] apptainer version 1.4.0-1.el9
[2025-05-17 04:23:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 04:23:00] c7-13-32.aglt2.org
[2025-05-17 04:23:00] apptainer works
[2025-05-17 04:23:00] Set ATHENA_PROC_NUMBER=8
[2025-05-17 04:23:00] Set ATHENA_CORE_NUMBER=8
[2025-05-17 04:23:00] Starting ATLAS job with PandaID=6653392392
[2025-05-17 04:23:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 06:45:38]  *** The last 200 lines of the pilot log: ***
[2025-05-17 06:45:38] 2025-05-17 10:45:23,343 | INFO     | mean x: 1747474447.0143886
[2025-05-17 06:45:38] 2025-05-17 10:45:23,343 | INFO     | mean y: 2129242.273381295
[2025-05-17 06:45:38] 2025-05-17 10:45:23,350 | INFO     | -- intersect: -83787361169.73306
[2025-05-17 06:45:38] 2025-05-17 10:45:23,350 | INFO     | intersect: -83787361169.73306
[2025-05-17 06:45:38] 2025-05-17 10:45:23,350 | INFO     | chi2: 4.923343379219271
[2025-05-17 06:45:38] 2025-05-17 10:45:23,351 | INFO     | sum of square deviations: 746057421.4701473
[2025-05-17 06:45:38] 2025-05-17 10:45:23,351 | INFO     | sum of deviations: 39447906595.544754
[2025-05-17 06:45:38] 2025-05-17 10:45:23,351 | INFO     | mean x: 1747474294.5149255
[2025-05-17 06:45:38] 2025-05-17 10:45:23,351 | INFO     | mean y: 2128355.9776119404
[2025-05-17 06:45:38] 2025-05-17 10:45:23,351 | INFO     | -- intersect: -92395857059.54388
[2025-05-17 06:45:38] 2025-05-17 10:45:23,351 | INFO     | intersect: -92395857059.54388
[2025-05-17 06:45:38] 2025-05-17 10:45:23,352 | INFO     | chi2: 4.919744058900457
[2025-05-17 06:45:38] 2025-05-17 10:45:23,352 | INFO     | current chi2=4.919744058900457 (change=0.07310723712684167 %)
[2025-05-17 06:45:38] 2025-05-17 10:45:23,352 | INFO     | right removable region: 133
[2025-05-17 06:45:38] 2025-05-17 10:45:23,352 | INFO     | sum of square deviations: 746056201.4701473
[2025-05-17 06:45:38] 2025-05-17 10:45:23,352 | INFO     | sum of deviations: 10230290615.14924
[2025-05-17 06:45:38] 2025-05-17 10:45:23,353 | INFO     | mean x: 1747474599.5149255
[2025-05-17 06:45:38] 2025-05-17 10:45:23,353 | INFO     | mean y: 2181262.925373134
[2025-05-17 06:45:38] 2025-05-17 10:45:23,353 | INFO     | -- intersect: -23960052360.226887
[2025-05-17 06:45:38] 2025-05-17 10:45:23,353 | INFO     | intersect: -23960052360.226887
[2025-05-17 06:45:38] 2025-05-17 10:45:23,353 | INFO     | chi2: 2.204846183681952
[2025-05-17 06:45:38] 2025-05-17 10:45:23,353 | INFO     | current chi2=2.204846183681952 (change=55.21648575258242 %)
[2025-05-17 06:45:38] 2025-05-17 10:45:23,353 | INFO     | sum of square deviations: 665616873.9689934
[2025-05-17 06:45:38] 2025-05-17 10:45:23,354 | INFO     | sum of deviations: -9989008397.379847
[2025-05-17 06:45:38] 2025-05-17 10:45:23,354 | INFO     | mean x: 1747474752.015504
[2025-05-17 06:45:38] 2025-05-17 10:45:23,354 | INFO     | mean y: 2219608.689922481
[2025-05-17 06:45:38] 2025-05-17 10:45:23,354 | INFO     | -- intersect: 26226825165.94818
[2025-05-17 06:45:38] 2025-05-17 10:45:23,354 | INFO     | intersect: 26226825165.94818
[2025-05-17 06:45:38] 2025-05-17 10:45:23,354 | INFO     | chi2: 0.9641289571907092
[2025-05-17 06:45:38] 2025-05-17 10:45:23,354 | INFO     | current chi2=0.9641289571907092 (change=56.27228038281221 %)
[2025-05-17 06:45:38] 2025-05-17 10:45:23,354 | INFO     | sum of square deviations: 591177658.9677436
[2025-05-17 06:45:38] 2025-05-17 10:45:23,355 | INFO     | sum of deviations: -24448784057.45161
[2025-05-17 06:45:38] 2025-05-17 10:45:23,355 | INFO     | mean x: 1747474904.516129
[2025-05-17 06:45:38] 2025-05-17 10:45:23,355 | INFO     | mean y: 2248999.2258064514
[2025-05-17 06:45:38] 2025-05-17 10:45:23,355 | INFO     | -- intersect: 72270941731.84789
[2025-05-17 06:45:38] 2025-05-17 10:45:23,355 | INFO     | intersect: 72270941731.84789
[2025-05-17 06:45:38] 2025-05-17 10:45:23,355 | INFO     | chi2: 0.17414822917204434
[2025-05-17 06:45:38] 2025-05-17 10:45:23,355 | INFO     | current chi2=0.17414822917204434 (change=81.93724730771706 %)
[2025-05-17 06:45:38] 2025-05-17 10:45:23,356 | INFO     | sum of square deviations: 522505993.9663862
[2025-05-17 06:45:38] 2025-05-17 10:45:23,356 | INFO     | sum of deviations: -22227858246.932774
[2025-05-17 06:45:38] 2025-05-17 10:45:23,356 | INFO     | mean x: 1747475057.0168068
[2025-05-17 06:45:38] 2025-05-17 10:45:23,356 | INFO     | mean y: 2244062.9663865548
[2025-05-17 06:45:38] 2025-05-17 10:45:23,356 | INFO     | -- intersect: 74341348888.46849
[2025-05-17 06:45:38] 2025-05-17 10:45:23,356 | INFO     | intersect: 74341348888.46849
[2025-05-17 06:45:38] 2025-05-17 10:45:23,356 | INFO     | chi2: 0.17128428740389584
[2025-05-17 06:45:38] 2025-05-17 10:45:23,356 | INFO     | current chi2=0.17128428740389584 (change=1.6445425725915108 %)
[2025-05-17 06:45:38] 2025-05-17 10:45:23,357 | INFO     | left removable region: 40
[2025-05-17 06:45:38] 2025-05-17 10:45:23,357 | INFO     | sum of square deviations: 249390327.9569894
[2025-05-17 06:45:38] 2025-05-17 10:45:23,357 | INFO     | sum of deviations: -4862452359.989247
[2025-05-17 06:45:38] 2025-05-17 10:45:23,357 | INFO     | mean x: 1747475484.0215054
[2025-05-17 06:45:38] 2025-05-17 10:45:23,357 | INFO     | mean y: 2199318.494623656
[2025-05-17 06:45:38] 2025-05-17 10:45:23,357 | INFO     | -- intersect: 34073353404.186115
[2025-05-17 06:45:38] 2025-05-17 10:45:23,357 | INFO     | intersect: 34073353404.186115
[2025-05-17 06:45:38] 2025-05-17 10:45:23,357 | INFO     | chi2: 0.07641786255416114
[2025-05-17 06:45:38] 2025-05-17 10:45:23,357 | INFO     | -- intersect: 34073353404.186115
[2025-05-17 06:45:38] 2025-05-17 10:45:23,358 | INFO     | current memory leak: -19.50 B/s (using 93 data points, chi2=0.08)
[2025-05-17 06:45:38] 2025-05-17 10:45:23,362 | INFO     | ..............................
[2025-05-17 06:45:38] 2025-05-17 10:45:23,362 | INFO     | . Timing measurements:
[2025-05-17 06:45:38] 2025-05-17 10:45:23,362 | INFO     | . get job = 0 s
[2025-05-17 06:45:38] 2025-05-17 10:45:23,362 | INFO     | . initial setup = 3 s
[2025-05-17 06:45:38] 2025-05-17 10:45:23,362 | INFO     | . payload setup = 11 s
[2025-05-17 06:45:38] 2025-05-17 10:45:23,363 | INFO     | . stage-in = 0 s
[2025-05-17 06:45:38] 2025-05-17 10:45:23,363 | INFO     | . payload execution = 8472 s
[2025-05-17 06:45:38] 2025-05-17 10:45:23,363 | INFO     | . stage-out = 1 s
[2025-05-17 06:45:38] 2025-05-17 10:45:23,363 | INFO     | . log creation = 0 s
[2025-05-17 06:45:38] 2025-05-17 10:45:23,363 | INFO     | ..............................
[2025-05-17 06:45:38] 2025-05-17 10:45:23,818 | INFO     | 
[2025-05-17 06:45:38] 2025-05-17 10:45:23,818 | INFO     | job summary report
[2025-05-17 06:45:38] 2025-05-17 10:45:23,818 | INFO     | --------------------------------------------------
[2025-05-17 06:45:38] 2025-05-17 10:45:23,818 | INFO     | PanDA job id: 6653392392
[2025-05-17 06:45:38] 2025-05-17 10:45:23,819 | INFO     | task id: 44638099
[2025-05-17 06:45:38] 2025-05-17 10:45:23,819 | INFO     | errors: (none)
[2025-05-17 06:45:38] 2025-05-17 10:45:23,819 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 06:45:38] 2025-05-17 10:45:23,819 | INFO     | pilot state: finished 
[2025-05-17 06:45:38] 2025-05-17 10:45:23,819 | INFO     | transexitcode: 0
[2025-05-17 06:45:38] 2025-05-17 10:45:23,819 | INFO     | exeerrorcode: 0
[2025-05-17 06:45:38] 2025-05-17 10:45:23,819 | INFO     | exeerrordiag: 
[2025-05-17 06:45:38] 2025-05-17 10:45:23,819 | INFO     | exitcode: 0
[2025-05-17 06:45:38] 2025-05-17 10:45:23,819 | INFO     | exitmsg: OK
[2025-05-17 06:45:38] 2025-05-17 10:45:23,819 | INFO     | cpuconsumptiontime: 39373 s
[2025-05-17 06:45:38] 2025-05-17 10:45:23,819 | INFO     | nevents: 400
[2025-05-17 06:45:38] 2025-05-17 10:45:23,819 | INFO     | neventsw: 0
[2025-05-17 06:45:38] 2025-05-17 10:45:23,819 | INFO     | pid: 3782597
[2025-05-17 06:45:38] 2025-05-17 10:45:23,819 | INFO     | pgrp: 3782597
[2025-05-17 06:45:38] 2025-05-17 10:45:23,820 | INFO     | corecount: 8
[2025-05-17 06:45:38] 2025-05-17 10:45:23,820 | INFO     | event service: False
[2025-05-17 06:45:38] 2025-05-17 10:45:23,820 | INFO     | sizes: {0: 2393542, 1: 2393741, 7: 2393947, 11: 2393975, 8488: 2421648, 8491: 2430617, 8492: 2430801, 8507: 2430971}
[2025-05-17 06:45:38] 2025-05-17 10:45:23,820 | INFO     | --------------------------------------------------
[2025-05-17 06:45:38] 2025-05-17 10:45:23,820 | INFO     | 
[2025-05-17 06:45:38] 2025-05-17 10:45:23,820 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-17 06:45:38] 2025-05-17 10:45:23,897 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 06:45:38] 2025-05-17 10:45:23,898 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 06:45:38] 2025-05-17 10:45:23,898 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 06:45:38] 2025-05-17 10:45:23,898 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 06:45:38] 2025-05-17 10:45:23,898 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 06:45:38] 2025-05-17 10:45:23,898 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 06:45:38] 2025-05-17 10:45:23,898 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 06:45:38] 2025-05-17 10:45:23,898 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 06:45:38] 2025-05-17 10:45:23,899 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 06:45:38] 2025-05-17 10:45:23,899 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 06:45:38] 2025-05-17 10:45:23,899 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 06:45:38] 2025-05-17 10:45:23,899 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 06:45:38] 2025-05-17 10:45:23,899 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 06:45:38] 2025-05-17 10:45:23,899 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 06:45:38] 2025-05-17 10:45:23,899 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 06:45:38] 2025-05-17 10:45:23,899 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 06:45:38] 2025-05-17 10:45:23,899 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 06:45:38] 2025-05-17 10:45:23,899 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 06:45:38] 2025-05-17 10:45:23,899 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 06:45:38] 2025-05-17 10:45:23,899 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 06:45:38] 2025-05-17 10:45:23,900 | INFO     | job 6653392392 has completed (purged errors)
[2025-05-17 06:45:38] 2025-05-17 10:45:23,900 | INFO     | overall cleanup function is called
[2025-05-17 06:45:38] 2025-05-17 10:45:24,909 | INFO     | --- collectZombieJob: --- 10, [3782597]
[2025-05-17 06:45:38] 2025-05-17 10:45:24,909 | INFO     | zombie collector waiting for pid 3782597
[2025-05-17 06:45:38] 2025-05-17 10:45:24,909 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 06:45:38] 2025-05-17 10:45:24,909 | INFO     | collected zombie processes
[2025-05-17 06:45:38] 2025-05-17 10:45:24,909 | INFO     | will attempt to kill all subprocesses of pid=3782597
[2025-05-17 06:45:38] 2025-05-17 10:45:25,449 | INFO     | PID=3775610 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-05-17 06:45:38] 2025-05-17 10:45:25,450 | INFO     | .. there are 31 such processes running
[2025-05-17 06:45:38] 2025-05-17 10:45:25,898 | INFO     | process IDs to be killed: [3782597] (in reverse order)
[2025-05-17 06:45:38] 2025-05-17 10:45:26,382 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 06:45:38] 2025-05-17 10:45:26,382 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 06:45:38] 2025-05-17 10:45:26,446 | INFO     | did not find any defunct processes belonging to 3782597
[2025-05-17 06:45:38] 2025-05-17 10:45:26,530 | INFO     | did not find any defunct processes belonging to 3782597
[2025-05-17 06:45:38] 2025-05-17 10:45:26,535 | INFO     | ready for new job
[2025-05-17 06:45:38] 2025-05-17 10:45:26,535 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 06:45:38] 2025-05-17 10:45:26,537 | INFO     | **************************************
[2025-05-17 06:45:38] 2025-05-17 10:45:26,538 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 06:45:38] 2025-05-17 10:45:26,538 | INFO     | **************************************
[2025-05-17 06:45:38] 2025-05-17 10:45:26,538 | INFO     | 
[2025-05-17 06:45:38] 2025-05-17 10:45:26,572 | INFO     | architecture information:
[2025-05-17 06:45:38] 2025-05-17 10:45:26,608 | INFO     | executing command: cat /etc/os-release
[2025-05-17 06:45:38] 2025-05-17 10:45:26,785 | INFO     | cat /etc/os-release:
[2025-05-17 06:45:38] NAME="CentOS Linux"
[2025-05-17 06:45:38] VERSION="7 (Core)"
[2025-05-17 06:45:38] ID="centos"
[2025-05-17 06:45:38] ID_LIKE="rhel fedora"
[2025-05-17 06:45:38] VERSION_ID="7"
[2025-05-17 06:45:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 06:45:38] ANSI_COLOR="0;31"
[2025-05-17 06:45:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 06:45:38] HOME_URL="https://www.centos.org/"
[2025-05-17 06:45:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 06:45:38] 
[2025-05-17 06:45:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 06:45:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 06:45:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 06:45:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 06:45:38] 
[2025-05-17 06:45:38] 2025-05-17 10:45:26,786 | INFO     | **************************************
[2025-05-17 06:45:38] 2025-05-17 10:45:27,289 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-17 06:45:38] 2025-05-17 10:45:27,421 | INFO     | sufficient remaining disk space (95122620416 B)
[2025-05-17 06:45:38] 2025-05-17 10:45:27,421 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 06:45:38] 2025-05-17 10:45:27,421 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 06:45:38] 2025-05-17 10:45:27,421 | INFO     | update_server=False
[2025-05-17 06:45:38] 2025-05-17 10:45:27,421 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 06:45:38] 2025-05-17 10:45:27,422 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 06:45:38] 2025-05-17 10:45:27,422 | INFO     | aborting loop
[2025-05-17 06:45:38] 2025-05-17 10:45:27,424 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 06:45:38] 2025-05-17 10:45:27,456 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 06:45:38] 2025-05-17 10:45:27,456 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 06:45:38] 2025-05-17 10:45:27,456 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 06:45:38] 2025-05-17 10:45:27,457 | INFO     | all data control threads have been joined
[2025-05-17 06:45:38] 2025-05-17 10:45:28,156 | INFO     | all payload control threads have been joined
[2025-05-17 06:45:38] 2025-05-17 10:45:28,157 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 06:45:38] 2025-05-17 10:45:28,427 | INFO     | [job] retrieve thread has finished
[2025-05-17 06:45:38] 2025-05-17 10:45:28,428 | INFO     | [job] job monitor thread has finished
[2025-05-17 06:45:38] 2025-05-17 10:45:28,462 | INFO     | [data] control thread has finished
[2025-05-17 06:45:38] 2025-05-17 10:45:28,490 | INFO     | [data] copytool_in thread has finished
[2025-05-17 06:45:38] 2025-05-17 10:45:28,494 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 06:45:38] 2025-05-17 10:45:28,589 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 06:45:38] 2025-05-17 10:45:28,648 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 06:45:38] 2025-05-17 10:45:28,975 | INFO     | [payload] failed_post thread has finished
[2025-05-17 06:45:38] 2025-05-17 10:45:28,994 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 06:45:38] 2025-05-17 10:45:29,045 | INFO     | [payload] validate_post thread has finished
[2025-05-17 06:45:38] 2025-05-17 10:45:29,120 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 06:45:38] 2025-05-17 10:45:29,125 | INFO     | all job control threads have been joined
[2025-05-17 06:45:38] 2025-05-17 10:45:29,162 | INFO     | [payload] control thread has finished
[2025-05-17 06:45:38] 2025-05-17 10:45:29,432 | INFO     | [data] copytool_out thread has finished
[2025-05-17 06:45:38] 2025-05-17 10:45:29,654 | INFO     | [job] queue monitor thread has finished
[2025-05-17 06:45:38] 2025-05-17 10:45:29,916 | INFO     | [job] validate thread has finished
[2025-05-17 06:45:38] 2025-05-17 10:45:30,131 | INFO     | [job] control thread has finished
[2025-05-17 06:45:38] 2025-05-17 10:45:32,173 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 06:45:38] 2025-05-17 10:45:32,430 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139918476572480)>', '<ExcThread(monitor, started 139918114268928)>']
[2025-05-17 06:45:38] 2025-05-17 10:45:32,491 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 06:45:38] 2025-05-17 10:45:32,491 | INFO     | [monitor] control thread has ended
[2025-05-17 06:45:38] 2025-05-17 10:45:37,456 | INFO     | all workflow threads have been joined
[2025-05-17 06:45:38] 2025-05-17 10:45:37,456 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 06:45:38] 2025-05-17 10:45:37,457 | INFO     | traces error code: 0
[2025-05-17 06:45:38] 2025-05-17 10:45:37,457 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 06:45:38] 2025-05-17 10:45:37,623 [wrapper] ==== pilot stdout END ====
[2025-05-17 06:45:38] 2025-05-17 10:45:37,626 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 06:45:38] 2025-05-17 10:45:37,629 [wrapper] pilotpid: 3775610
[2025-05-17 06:45:38] 2025-05-17 10:45:37,632 [wrapper] Pilot exit status: 0
[2025-05-17 06:45:38] 2025-05-17 10:45:37,759 [wrapper] pandaids: 6653392392
[2025-05-17 06:45:38] 2025-05-17 10:45:37,955 [wrapper] cleanup supervisor_pilot  487185 3775611
[2025-05-17 06:45:38] 2025-05-17 10:45:37,978 [wrapper] Test setup, not cleaning
[2025-05-17 06:45:38] 2025-05-17 10:45:37,981 [wrapper] apfmon messages muted
[2025-05-17 06:45:38] 2025-05-17 10:45:37,983 [wrapper] ==== wrapper stdout END ====
[2025-05-17 06:45:38] 2025-05-17 10:45:37,986 [wrapper] ==== wrapper stderr END ====
[2025-05-17 06:45:38]  *** Error codes and diagnostics ***
[2025-05-17 06:45:38]     "exeErrorCode": 0,
[2025-05-17 06:45:38]     "exeErrorDiag": "",
[2025-05-17 06:45:38]     "pilotErrorCode": 0,
[2025-05-17 06:45:38]     "pilotErrorDiag": "",
[2025-05-17 06:45:38]  *** Listing of results directory ***
[2025-05-17 06:45:38] total 411092
[2025-05-17 06:45:38] -rw-r--r--. 1 boincer umatlas    495897 May 17 01:37 pilot3.tar.gz
[2025-05-17 06:45:38] -rw-r--r--. 1 boincer umatlas      5111 May 17 01:43 queuedata.json
[2025-05-17 06:45:38] -rwx------. 1 boincer umatlas     37140 May 17 01:44 runpilot2-wrapper.sh
[2025-05-17 06:45:38] -rw-r--r--. 1 boincer umatlas       100 May 17 04:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 06:45:38] -rwxr-xr-x. 1 boincer umatlas      7986 May 17 04:22 run_atlas
[2025-05-17 06:45:38] -rw-r--r--. 1 boincer umatlas       105 May 17 04:22 job.xml
[2025-05-17 06:45:38] -rw-r--r--. 2 boincer umatlas 222747725 May 17 04:22 EVNT.44638096._002036.pool.root.1
[2025-05-17 06:45:38] -rw-r--r--. 2 boincer umatlas     17569 May 17 04:22 start_atlas.sh
[2025-05-17 06:45:38] drwxrwx--x. 2 boincer umatlas      4096 May 17 04:22 shared
[2025-05-17 06:45:38] -rw-r--r--. 2 boincer umatlas    508879 May 17 04:22 input.tar.gz
[2025-05-17 06:45:38] -rw-r--r--. 1 boincer umatlas         0 May 17 04:22 boinc_lockfile
[2025-05-17 06:45:38] -rw-r--r--. 1 boincer umatlas      2540 May 17 04:23 pandaJob.out
[2025-05-17 06:45:38] -rw-------. 1 boincer umatlas       467 May 17 04:23 setup.sh.local
[2025-05-17 06:45:38] -rw-------. 1 boincer umatlas    994635 May 17 04:23 agis_schedconf.cvmfs.json
[2025-05-17 06:45:38] -rw-------. 1 boincer umatlas   1596741 May 17 04:23 agis_ddmendpoints.agis.ALL.json
[2025-05-17 06:45:38] drwx------. 4 boincer umatlas      4096 May 17 04:23 pilot3
[2025-05-17 06:45:38] -rw-r--r--. 1 boincer umatlas      6896 May 17 06:40 init_data.xml
[2025-05-17 06:45:38] -rw-------. 1 boincer umatlas 192128607 May 17 06:44 HITS.44638099._050883.pool.root.1
[2025-05-17 06:45:38] -rw-r--r--. 1 boincer umatlas       529 May 17 06:44 boinc_task_state.xml
[2025-05-17 06:45:38] -rw-------. 1 boincer umatlas      1029 May 17 06:45 memory_monitor_summary.json
[2025-05-17 06:45:38] -rw-------. 1 boincer umatlas    329540 May 17 06:45 log.44638099._050883.job.log.tgz.1
[2025-05-17 06:45:38] -rw-------. 1 boincer umatlas        95 May 17 06:45 pilot_heartbeat.json
[2025-05-17 06:45:38] -rw-------. 1 boincer umatlas      7691 May 17 06:45 heartbeat.json
[2025-05-17 06:45:38] -rw-r--r--. 1 boincer umatlas      8192 May 17 06:45 boinc_mmap_file
[2025-05-17 06:45:38] -rw-r--r--. 1 boincer umatlas        27 May 17 06:45 wrapper_checkpoint.txt
[2025-05-17 06:45:38] -rw-------. 1 boincer umatlas      4353 May 17 06:45 pilotlog.txt
[2025-05-17 06:45:38] -rw-------. 1 boincer umatlas    790167 May 17 06:45 log.44638099._050883.job.log.1
[2025-05-17 06:45:38] -rw-------. 1 boincer umatlas       357 May 17 06:45 output.list
[2025-05-17 06:45:38] -rw-r--r--. 1 boincer umatlas       620 May 17 06:45 runtime_log
[2025-05-17 06:45:38] -rw-------. 1 boincer umatlas   1136640 May 17 06:45 result.tar.gz
[2025-05-17 06:45:38] -rw-r--r--. 1 boincer umatlas     11418 May 17 06:45 runtime_log.err
[2025-05-17 06:45:38] -rw-------. 1 boincer umatlas       653 May 17 06:45 GeKMDmtWPa7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUpNKDmnGs5rm.diag
[2025-05-17 06:45:38] -rw-r--r--. 1 boincer umatlas     20920 May 17 06:45 stderr.txt
[2025-05-17 06:45:38] HITS file was successfully produced:
[2025-05-17 06:45:38] -rw-------. 1 boincer umatlas 192128607 May 17 06:44 shared/HITS.pool.root.1
[2025-05-17 06:45:38]  *** Contents of shared directory: ***
[2025-05-17 06:45:38] total 406796
[2025-05-17 06:45:38] -rw-r--r--. 2 boincer umatlas 222747725 May 17 04:22 ATLAS.root_0
[2025-05-17 06:45:38] -rw-r--r--. 2 boincer umatlas     17569 May 17 04:22 start_atlas.sh
[2025-05-17 06:45:38] -rw-r--r--. 2 boincer umatlas    508879 May 17 04:22 input.tar.gz
[2025-05-17 06:45:38] -rw-------. 1 boincer umatlas 192128607 May 17 06:44 HITS.pool.root.1
[2025-05-17 06:45:38] -rw-------. 1 boincer umatlas   1136640 May 17 06:45 result.tar.gz
06:45:40 (3771899): run_atlas exited; CPU time 39514.877904
06:45:40 (3771899): called boinc_finish(0)

</stderr_txt>
]]>

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