Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:59:58 (29654): wrapper (7.7.26015): starting
03:59:58 (29654): wrapper: running run_atlas (--nthreads 12)
[2025-05-17 03:59:58] Arguments: --nthreads 12
[2025-05-17 03:59:58] Threads: 12
[2025-05-17 03:59:58] Checking for CVMFS
[2025-05-17 03:59:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 03:59:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 03:59:59] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 03:59:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 03:59:59] 2.11.2.0 2987 9447 85332 146093 2 56 18722405 20275200 1 130560 0 3825894 99.986 1785510 53988 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-05-17 03:59:59] CVMFS is ok
[2025-05-17 03:59:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-17 03:59:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-17 03:59:59] Further information can be found at the LHC@home message board.
[2025-05-17 03:59:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 03:59:59] Checking for apptainer binary...
[2025-05-17 03:59:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 03:59:59] Running /usr/bin/apptainer --version
[2025-05-17 03:59:59] apptainer version 1.3.2-1.el7
[2025-05-17 03:59:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 04:00:00] c-205-19.aglt2.org
[2025-05-17 04:00:00] apptainer works
[2025-05-17 04:00:00] Set ATHENA_PROC_NUMBER=12
[2025-05-17 04:00:00] Set ATHENA_CORE_NUMBER=12
[2025-05-17 04:00:00] Starting ATLAS job with PandaID=6653392081
[2025-05-17 04:00:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 05:38:58]  *** The last 200 lines of the pilot log: ***
[2025-05-17 05:38:58]  is_altstaged=None
[2025-05-17 05:38:58]  is_tar=False
[2025-05-17 05:38:58]  lfn=log.44638099._050610.job.log.tgz.1
[2025-05-17 05:38:58]  mtime=0
[2025-05-17 05:38:58]  protocol_id=None
[2025-05-17 05:38:58]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-17 05:38:58]  replicas=None
[2025-05-17 05:38:58]  scope=mc23_13p6TeV
[2025-05-17 05:38:58]  status=None
[2025-05-17 05:38:58]  status_code=0
[2025-05-17 05:38:58]  storage_token=
[2025-05-17 05:38:58]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6653392081/log.44638099._050610.job.log.tgz.1
[2025-05-17 05:38:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/71/log.44638099._050610.job.log.tgz.1
[2025-05-17 05:38:58]  workdir=None
[2025-05-17 05:38:58] ]
[2025-05-17 05:38:58] 2025-05-17 09:38:35,346 | INFO     | transferring file log.44638099._050610.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6653392081/log.44638099._050610.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-05-17 05:38:58] 2025-05-17 09:38:35,347 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6653392081/log.44638099._050610.job.log.tgz.1 /tmp/boinchome/slots/0/log.44638099._050610.job
[2025-05-17 05:38:58] 2025-05-17 09:38:35,369 | INFO     | monitor loop #438: job 0:6653392081 is in state 'stageout'
[2025-05-17 05:38:58] 2025-05-17 09:38:35,369 | WARNING  | aborting job monitor tasks since payload process 7561 is not running
[2025-05-17 05:38:58] 2025-05-17 09:38:35,370 | INFO     | adding to output.list: log.44638099._050610.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/71/log.44638099._050610.job.log.tg
[2025-05-17 05:38:58] 2025-05-17 09:38:35,371 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-17 05:38:58] 2025-05-17 09:38:35,371 | INFO     | summary of transferred files:
[2025-05-17 05:38:58] 2025-05-17 09:38:35,371 | INFO     |  -- lfn=log.44638099._050610.job.log.tgz.1, status_code=0, status=transferred
[2025-05-17 05:38:58] 2025-05-17 09:38:35,372 | INFO     | stage-out finished correctly
[2025-05-17 05:38:58] 2025-05-17 09:38:36,633 | INFO     | PID=1007 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-05-17 05:38:58] 2025-05-17 09:38:37,873 | INFO     | monitor loop #439: job 0:6653392081 is in state 'finished'
[2025-05-17 05:38:58] 2025-05-17 09:38:37,873 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 05:38:58] 2025-05-17 09:38:38,382 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-17 05:38:58] 2025-05-17 09:38:39,167 | INFO     | job 6653392081 has state=finished
[2025-05-17 05:38:58] 2025-05-17 09:38:39,167 | INFO     | preparing for final server update for job 6653392081 in state='finished'
[2025-05-17 05:38:58] 2025-05-17 09:38:39,168 | INFO     | this job has now completed (state=finished)
[2025-05-17 05:38:58] 2025-05-17 09:38:39,168 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-17 05:38:58] 2025-05-17 09:38:39,168 | INFO     | log transfer has been attempted: DONE
[2025-05-17 05:38:58] 2025-05-17 09:38:39,168 | INFO     | job 6653392081 has finished - writing final server update
[2025-05-17 05:38:58] 2025-05-17 09:38:39,169 | INFO     | total number of processed events: 400 (read)
[2025-05-17 05:38:58] 2025-05-17 09:38:39,170 | INFO     | executing command: lscpu
[2025-05-17 05:38:58] 2025-05-17 09:38:39,199 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-17 05:38:58] 2025-05-17 09:38:40,385 | INFO     | monitor loop #440: job 0:6653392081 is in state 'finished'
[2025-05-17 05:38:58] 2025-05-17 09:38:40,386 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 05:38:58] 2025-05-17 09:38:42,889 | INFO     | monitor loop #441: job 0:6653392081 is in state 'finished'
[2025-05-17 05:38:58] 2025-05-17 09:38:42,900 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-17 05:38:58] 2025-05-17 09:38:43,850 | INFO     | CPU arch script returned: x86-64-v2
[2025-05-17 05:38:58] 2025-05-17 09:38:43,850 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6653392081/memory_monitor_summary.json (trf name=prmon)
[2025-05-17 05:38:58] 2025-05-17 09:38:43,851 | INFO     | extracted standard info from prmon json
[2025-05-17 05:38:58] 2025-05-17 09:38:43,851 | INFO     | extracted standard memory fields from prmon json
[2025-05-17 05:38:58] 2025-05-17 09:38:43,851 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-17 05:38:58] 2025-05-17 09:38:43,852 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-17 05:38:58] 2025-05-17 09:38:43,852 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-17 05:38:58] 2025-05-17 09:38:43,855 | INFO     | fitting pss+swap vs Time
[2025-05-17 05:38:58] 2025-05-17 09:38:43,855 | INFO     | sum of square deviations: 226022842.5
[2025-05-17 05:38:58] 2025-05-17 09:38:43,856 | INFO     | sum of deviations: 30647516452.5
[2025-05-17 05:38:58] 2025-05-17 09:38:43,856 | INFO     | mean x: 1747471862.5
[2025-05-17 05:38:58] 2025-05-17 09:38:43,856 | INFO     | mean y: 2599508.433333333
[2025-05-17 05:38:58] 2025-05-17 09:38:43,856 | INFO     | -- intersect: -236945454342.58206
[2025-05-17 05:38:58] 2025-05-17 09:38:43,857 | INFO     | intersect: -236945454342.58206
[2025-05-17 05:38:58] 2025-05-17 09:38:43,857 | INFO     | chi2: 1.8742039847547587
[2025-05-17 05:38:58] 2025-05-17 09:38:43,857 | INFO     | -- intersect: -236945454342.58206
[2025-05-17 05:38:58] 2025-05-17 09:38:43,857 | INFO     | current memory leak: 135.59 B/s (using 90 data points, chi2=1.87)
[2025-05-17 05:38:58] 2025-05-17 09:38:43,858 | INFO     | ..............................
[2025-05-17 05:38:58] 2025-05-17 09:38:43,858 | INFO     | . Timing measurements:
[2025-05-17 05:38:58] 2025-05-17 09:38:43,858 | INFO     | . get job = 0 s
[2025-05-17 05:38:58] 2025-05-17 09:38:43,858 | INFO     | . initial setup = 2 s
[2025-05-17 05:38:58] 2025-05-17 09:38:43,858 | INFO     | . payload setup = 7 s
[2025-05-17 05:38:58] 2025-05-17 09:38:43,858 | INFO     | . stage-in = 0 s
[2025-05-17 05:38:58] 2025-05-17 09:38:43,858 | INFO     | . payload execution = 5873 s
[2025-05-17 05:38:58] 2025-05-17 09:38:43,858 | INFO     | . stage-out = 0 s
[2025-05-17 05:38:58] 2025-05-17 09:38:43,858 | INFO     | . log creation = 0 s
[2025-05-17 05:38:58] 2025-05-17 09:38:43,859 | INFO     | ..............................
[2025-05-17 05:38:58] 2025-05-17 09:38:43,941 | INFO     | 
[2025-05-17 05:38:58] 2025-05-17 09:38:43,941 | INFO     | job summary report
[2025-05-17 05:38:58] 2025-05-17 09:38:43,941 | INFO     | --------------------------------------------------
[2025-05-17 05:38:58] 2025-05-17 09:38:43,942 | INFO     | PanDA job id: 6653392081
[2025-05-17 05:38:58] 2025-05-17 09:38:43,942 | INFO     | task id: 44638099
[2025-05-17 05:38:58] 2025-05-17 09:38:43,942 | INFO     | errors: (none)
[2025-05-17 05:38:58] 2025-05-17 09:38:43,942 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 05:38:58] 2025-05-17 09:38:43,942 | INFO     | pilot state: finished 
[2025-05-17 05:38:58] 2025-05-17 09:38:43,942 | INFO     | transexitcode: 0
[2025-05-17 05:38:58] 2025-05-17 09:38:43,943 | INFO     | exeerrorcode: 0
[2025-05-17 05:38:58] 2025-05-17 09:38:43,943 | INFO     | exeerrordiag: 
[2025-05-17 05:38:58] 2025-05-17 09:38:43,943 | INFO     | exitcode: 0
[2025-05-17 05:38:58] 2025-05-17 09:38:43,943 | INFO     | exitmsg: OK
[2025-05-17 05:38:58] 2025-05-17 09:38:43,943 | INFO     | cpuconsumptiontime: 57530 s
[2025-05-17 05:38:58] 2025-05-17 09:38:43,943 | INFO     | nevents: 400
[2025-05-17 05:38:58] 2025-05-17 09:38:43,944 | INFO     | neventsw: 0
[2025-05-17 05:38:58] 2025-05-17 09:38:43,944 | INFO     | pid: 7561
[2025-05-17 05:38:58] 2025-05-17 09:38:43,944 | INFO     | pgrp: 7561
[2025-05-17 05:38:58] 2025-05-17 09:38:43,944 | INFO     | corecount: 12
[2025-05-17 05:38:58] 2025-05-17 09:38:43,944 | INFO     | event service: False
[2025-05-17 05:38:58] 2025-05-17 09:38:43,944 | INFO     | sizes: {0: 2393656, 1: 2393656, 5: 2393890, 11: 2393946, 5884: 2420492, 5886: 2429433, 5889: 2429617, 5894: 2429787}
[2025-05-17 05:38:58] 2025-05-17 09:38:43,945 | INFO     | --------------------------------------------------
[2025-05-17 05:38:58] 2025-05-17 09:38:43,945 | INFO     | 
[2025-05-17 05:38:58] 2025-05-17 09:38:43,945 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-17 05:38:58] 2025-05-17 09:38:43,968 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 05:38:58] 2025-05-17 09:38:43,968 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 05:38:58] 2025-05-17 09:38:43,968 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 05:38:58] 2025-05-17 09:38:43,968 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 05:38:58] 2025-05-17 09:38:43,969 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 05:38:58] 2025-05-17 09:38:43,969 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 05:38:58] 2025-05-17 09:38:43,969 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 05:38:58] 2025-05-17 09:38:43,969 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 05:38:58] 2025-05-17 09:38:43,969 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 05:38:58] 2025-05-17 09:38:43,969 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 05:38:58] 2025-05-17 09:38:43,970 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 05:38:58] 2025-05-17 09:38:43,970 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 05:38:58] 2025-05-17 09:38:43,970 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 05:38:58] 2025-05-17 09:38:43,970 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 05:38:58] 2025-05-17 09:38:43,970 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 05:38:58] 2025-05-17 09:38:43,970 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 05:38:58] 2025-05-17 09:38:43,971 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 05:38:58] 2025-05-17 09:38:43,971 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 05:38:58] 2025-05-17 09:38:43,971 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 05:38:58] 2025-05-17 09:38:43,971 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 05:38:58] 2025-05-17 09:38:43,971 | INFO     | job 6653392081 has completed (purged errors)
[2025-05-17 05:38:58] 2025-05-17 09:38:43,972 | INFO     | overall cleanup function is called
[2025-05-17 05:38:58] 2025-05-17 09:38:44,980 | INFO     | --- collectZombieJob: --- 10, [7561]
[2025-05-17 05:38:58] 2025-05-17 09:38:44,980 | INFO     | zombie collector waiting for pid 7561
[2025-05-17 05:38:58] 2025-05-17 09:38:44,980 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 05:38:58] 2025-05-17 09:38:44,981 | INFO     | collected zombie processes
[2025-05-17 05:38:58] 2025-05-17 09:38:44,981 | INFO     | will attempt to kill all subprocesses of pid=7561
[2025-05-17 05:38:58] 2025-05-17 09:38:45,072 | INFO     | process IDs to be killed: [7561] (in reverse order)
[2025-05-17 05:38:58] 2025-05-17 09:38:45,125 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 05:38:58] 2025-05-17 09:38:45,125 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 05:38:58] 2025-05-17 09:38:45,128 | INFO     | did not find any defunct processes belonging to 7561
[2025-05-17 05:38:58] 2025-05-17 09:38:45,130 | INFO     | did not find any defunct processes belonging to 7561
[2025-05-17 05:38:58] 2025-05-17 09:38:45,131 | INFO     | ready for new job
[2025-05-17 05:38:58] 2025-05-17 09:38:45,131 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 05:38:58] 2025-05-17 09:38:45,132 | INFO     | **************************************
[2025-05-17 05:38:58] 2025-05-17 09:38:45,132 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 05:38:58] 2025-05-17 09:38:45,132 | INFO     | **************************************
[2025-05-17 05:38:58] 2025-05-17 09:38:45,132 | INFO     | 
[2025-05-17 05:38:58] 2025-05-17 09:38:45,133 | INFO     | architecture information:
[2025-05-17 05:38:58] 2025-05-17 09:38:45,133 | INFO     | executing command: cat /etc/os-release
[2025-05-17 05:38:58] 2025-05-17 09:38:45,149 | INFO     | cat /etc/os-release:
[2025-05-17 05:38:58] NAME="CentOS Linux"
[2025-05-17 05:38:58] VERSION="7 (Core)"
[2025-05-17 05:38:58] ID="centos"
[2025-05-17 05:38:58] ID_LIKE="rhel fedora"
[2025-05-17 05:38:58] VERSION_ID="7"
[2025-05-17 05:38:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 05:38:58] ANSI_COLOR="0;31"
[2025-05-17 05:38:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 05:38:58] HOME_URL="https://www.centos.org/"
[2025-05-17 05:38:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 05:38:58] 
[2025-05-17 05:38:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 05:38:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 05:38:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 05:38:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 05:38:58] 
[2025-05-17 05:38:58] 2025-05-17 09:38:45,149 | INFO     | **************************************
[2025-05-17 05:38:58] 2025-05-17 09:38:45,652 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-17 05:38:58] 2025-05-17 09:38:45,668 | INFO     | sufficient remaining disk space (29397876736 B)
[2025-05-17 05:38:58] 2025-05-17 09:38:45,669 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 05:38:58] 2025-05-17 09:38:45,669 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 05:38:58] 2025-05-17 09:38:45,669 | INFO     | update_server=False
[2025-05-17 05:38:58] 2025-05-17 09:38:45,669 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 05:38:58] 2025-05-17 09:38:45,669 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 05:38:58] 2025-05-17 09:38:45,726 | INFO     | all job control threads have been joined
[2025-05-17 05:38:58] 2025-05-17 09:38:45,907 | INFO     | all payload control threads have been joined
[2025-05-17 05:38:58] 2025-05-17 09:38:45,971 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 05:38:58] 2025-05-17 09:38:45,980 | INFO     | all data control threads have been joined
[2025-05-17 05:38:58] 2025-05-17 09:38:46,418 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 05:38:58] 2025-05-17 09:38:46,418 | INFO     | aborting loop
[2025-05-17 05:38:58] 2025-05-17 09:38:46,660 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 05:38:58] 2025-05-17 09:38:46,661 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 05:38:58] 2025-05-17 09:38:46,661 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 05:38:58] 2025-05-17 09:38:46,675 | INFO     | [job] retrieve thread has finished
[2025-05-17 05:38:58] 2025-05-17 09:38:46,675 | INFO     | [job] queue monitor thread has finished
[2025-05-17 05:38:58] 2025-05-17 09:38:46,732 | INFO     | [job] control thread has finished
[2025-05-17 05:38:58] 2025-05-17 09:38:46,909 | INFO     | [payload] control thread has finished
[2025-05-17 05:38:58] 2025-05-17 09:38:46,985 | INFO     | [data] control thread has finished
[2025-05-17 05:38:58] 2025-05-17 09:38:47,152 | INFO     | [data] copytool_in thread has finished
[2025-05-17 05:38:58] 2025-05-17 09:38:47,227 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 05:38:58] 2025-05-17 09:38:47,423 | INFO     | [job] job monitor thread has finished
[2025-05-17 05:38:58] 2025-05-17 09:38:47,566 | INFO     | [payload] validate_post thread has finished
[2025-05-17 05:38:58] 2025-05-17 09:38:47,664 | INFO     | [payload] failed_post thread has finished
[2025-05-17 05:38:58] 2025-05-17 09:38:47,890 | INFO     | [job] validate thread has finished
[2025-05-17 05:38:58] 2025-05-17 09:38:47,976 | INFO     | [data] copytool_out thread has finished
[2025-05-17 05:38:58] 2025-05-17 09:38:48,022 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 05:38:58] 2025-05-17 09:38:48,049 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 05:38:58] 2025-05-17 09:38:48,147 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 05:38:58] 2025-05-17 09:38:48,971 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 05:38:58] 2025-05-17 09:38:52,976 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 05:38:58] 2025-05-17 09:38:53,511 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140674839934784)>', '<ExcThread(monitor, started 140674238232320)>']
[2025-05-17 05:38:58] 2025-05-17 09:38:53,697 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 05:38:58] 2025-05-17 09:38:53,697 | INFO     | [monitor] control thread has ended
[2025-05-17 05:38:58] 2025-05-17 09:38:58,513 | INFO     | all workflow threads have been joined
[2025-05-17 05:38:58] 2025-05-17 09:38:58,513 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 05:38:58] 2025-05-17 09:38:58,513 | INFO     | traces error code: 0
[2025-05-17 05:38:58] 2025-05-17 09:38:58,514 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 05:38:58] 2025-05-17 09:38:58,595 [wrapper] ==== pilot stdout END ====
[2025-05-17 05:38:58] 2025-05-17 09:38:58,599 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 05:38:58] 2025-05-17 09:38:58,602 [wrapper] pilotpid: 1007
[2025-05-17 05:38:58] 2025-05-17 09:38:58,606 [wrapper] Pilot exit status: 0
[2025-05-17 05:38:58] 2025-05-17 09:38:58,621 [wrapper] pandaids: 6653392081
[2025-05-17 05:38:58] 2025-05-17 09:38:58,660 [wrapper] cleanup supervisor_pilot 16157 1008
[2025-05-17 05:38:58] 2025-05-17 09:38:58,665 [wrapper] Test setup, not cleaning
[2025-05-17 05:38:58] 2025-05-17 09:38:58,669 [wrapper] apfmon messages muted
[2025-05-17 05:38:58] 2025-05-17 09:38:58,672 [wrapper] ==== wrapper stdout END ====
[2025-05-17 05:38:58] 2025-05-17 09:38:58,676 [wrapper] ==== wrapper stderr END ====
[2025-05-17 05:38:58]  *** Error codes and diagnostics ***
[2025-05-17 05:38:58]     "exeErrorCode": 0,
[2025-05-17 05:38:58]     "exeErrorDiag": "",
[2025-05-17 05:38:58]     "pilotErrorCode": 0,
[2025-05-17 05:38:58]     "pilotErrorDiag": "",
[2025-05-17 05:38:58]  *** Listing of results directory ***
[2025-05-17 05:38:58] total 410532
[2025-05-17 05:38:58] -rw-r--r-- 1 boincer umatlas    495897 May 17 00:34 pilot3.tar.gz
[2025-05-17 05:38:58] -rw-r--r-- 1 boincer umatlas      5111 May 17 01:13 queuedata.json
[2025-05-17 05:38:58] -rwx------ 1 boincer umatlas     37140 May 17 01:14 runpilot2-wrapper.sh
[2025-05-17 05:38:58] -rw-r--r-- 1 boincer umatlas       100 May 17 03:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 05:38:58] -rwxr-xr-x 1 boincer umatlas      7986 May 17 03:59 run_atlas
[2025-05-17 05:38:58] -rw-r--r-- 1 boincer umatlas       105 May 17 03:59 job.xml
[2025-05-17 05:38:58] -rw-r--r-- 2 boincer umatlas 221104509 May 17 03:59 EVNT.44638096._000137.pool.root.1
[2025-05-17 05:38:58] -rw-r--r-- 2 boincer umatlas     17569 May 17 03:59 start_atlas.sh
[2025-05-17 05:38:58] drwxrwx--x 2 boincer umatlas      4096 May 17 03:59 shared
[2025-05-17 05:38:58] -rw-r--r-- 2 boincer umatlas    508883 May 17 03:59 input.tar.gz
[2025-05-17 05:38:58] -rw-r--r-- 1 boincer umatlas         0 May 17 03:59 boinc_lockfile
[2025-05-17 05:38:58] -rw-r--r-- 1 boincer umatlas      2536 May 17 04:00 pandaJob.out
[2025-05-17 05:38:58] -rw------- 1 boincer umatlas       424 May 17 04:00 setup.sh.local
[2025-05-17 05:38:58] -rw------- 1 boincer umatlas    994635 May 17 04:00 agis_schedconf.cvmfs.json
[2025-05-17 05:38:58] -rw------- 1 boincer umatlas   1596741 May 17 04:00 agis_ddmendpoints.agis.ALL.json
[2025-05-17 05:38:58] drwx------ 4 boincer umatlas      4096 May 17 04:00 pilot3
[2025-05-17 05:38:58] -rw-r--r-- 1 boincer umatlas      5868 May 17 05:37 init_data.xml
[2025-05-17 05:38:58] -rw------- 1 boincer umatlas 193571125 May 17 05:38 HITS.44638099._050610.pool.root.1
[2025-05-17 05:38:58] -rw-r--r-- 1 boincer umatlas       529 May 17 05:38 boinc_task_state.xml
[2025-05-17 05:38:58] -rw------- 1 boincer umatlas        95 May 17 05:38 pilot_heartbeat.json
[2025-05-17 05:38:58] -rw------- 1 boincer umatlas      1049 May 17 05:38 memory_monitor_summary.json
[2025-05-17 05:38:58] -rw------- 1 boincer umatlas    382447 May 17 05:38 log.44638099._050610.job.log.tgz.1
[2025-05-17 05:38:58] -rw-r--r-- 1 boincer umatlas        27 May 17 05:38 wrapper_checkpoint.txt
[2025-05-17 05:38:58] -rw-r--r-- 1 boincer umatlas      8192 May 17 05:38 boinc_mmap_file
[2025-05-17 05:38:58] -rw------- 1 boincer umatlas      7745 May 17 05:38 heartbeat.json
[2025-05-17 05:38:58] -rw------- 1 boincer umatlas      4353 May 17 05:38 pilotlog.txt
[2025-05-17 05:38:58] -rw------- 1 boincer umatlas    550380 May 17 05:38 log.44638099._050610.job.log.1
[2025-05-17 05:38:58] -rw------- 1 boincer umatlas       357 May 17 05:38 output.list
[2025-05-17 05:38:58] -rw-r--r-- 1 boincer umatlas       620 May 17 05:38 runtime_log
[2025-05-17 05:38:58] -rw------- 1 boincer umatlas    952320 May 17 05:38 result.tar.gz
[2025-05-17 05:38:58] -rw-r--r-- 1 boincer umatlas     11015 May 17 05:38 runtime_log.err
[2025-05-17 05:38:58] -rw------- 1 boincer umatlas       658 May 17 05:38 JhkKDmq3Oa7n9Rq4apOajLDm4fhM0noT9bVof3QYDme0JKDmlTcUbm.diag
[2025-05-17 05:38:58] -rw-r--r-- 1 boincer umatlas     21487 May 17 05:38 stderr.txt
[2025-05-17 05:38:58] HITS file was successfully produced:
[2025-05-17 05:38:58] -rw------- 1 boincer umatlas 193571125 May 17 05:38 shared/HITS.pool.root.1
[2025-05-17 05:38:58]  *** Contents of shared directory: ***
[2025-05-17 05:38:58] total 406416
[2025-05-17 05:38:58] -rw-r--r-- 2 boincer umatlas 221104509 May 17 03:59 ATLAS.root_0
[2025-05-17 05:38:58] -rw-r--r-- 2 boincer umatlas     17569 May 17 03:59 start_atlas.sh
[2025-05-17 05:38:58] -rw-r--r-- 2 boincer umatlas    508883 May 17 03:59 input.tar.gz
[2025-05-17 05:38:58] -rw------- 1 boincer umatlas 193571125 May 17 05:38 HITS.pool.root.1
[2025-05-17 05:38:58] -rw------- 1 boincer umatlas    952320 May 17 05:38 result.tar.gz
05:39:00 (29654): run_atlas exited; CPU time 57552.542324
05:39:00 (29654): called boinc_finish(0)

</stderr_txt>
]]>

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