Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:22:48 (1556617): wrapper (7.7.26015): starting
11:22:48 (1556617): wrapper: running run_atlas (--nthreads 4)
[2025-05-18 11:22:48] Arguments: --nthreads 4
[2025-05-18 11:22:48] Threads: 4
[2025-05-18 11:22:48] Checking for CVMFS
[2025-05-18 11:22:48] No cvmfs_config command found, will try listing directly
[2025-05-18 11:22:48] CVMFS is ok
[2025-05-18 11:22:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-18 11:22:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-18 11:22:48] Further information can be found at the LHC@home message board.
[2025-05-18 11:22:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-18 11:22:48] Checking for apptainer binary...
[2025-05-18 11:22:48] which: no apptainer in ((null))
[2025-05-18 11:22:48] apptainer is not installed, using version from CVMFS
[2025-05-18 11:22:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-18 11:22:49] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2025-05-18 11:22:49] apptainer works
[2025-05-18 11:22:49] Set ATHENA_PROC_NUMBER=4
[2025-05-18 11:22:49] Set ATHENA_CORE_NUMBER=4
[2025-05-18 11:22:49] Starting ATLAS job with PandaID=6652828903
[2025-05-18 11:22:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-18 13:41:22]  *** The last 200 lines of the pilot log: ***
[2025-05-18 13:41:22] 2025-05-18 11:41:02,726 | INFO     | mean y: 2203898.529411765
[2025-05-18 13:41:22] 2025-05-18 11:41:02,726 | INFO     | -- intersect: -110539305085.06401
[2025-05-18 13:41:22] 2025-05-18 11:41:02,726 | INFO     | intersect: -110539305085.06401
[2025-05-18 13:41:22] 2025-05-18 11:41:02,727 | INFO     | chi2: 4.843422823992136
[2025-05-18 13:41:22] 2025-05-18 11:41:02,727 | INFO     | sum of square deviations: 697054930.0
[2025-05-18 13:41:22] 2025-05-18 11:41:02,727 | INFO     | sum of deviations: 55641149268.0
[2025-05-18 13:41:22] 2025-05-18 11:41:02,728 | INFO     | mean x: 1747564168.0
[2025-05-18 13:41:22] 2025-05-18 11:41:02,728 | INFO     | mean y: 2215026.9465648853
[2025-05-18 13:41:22] 2025-05-18 11:41:02,728 | INFO     | -- intersect: -139493934476.07214
[2025-05-18 13:41:22] 2025-05-18 11:41:02,728 | INFO     | intersect: -139493934476.07214
[2025-05-18 13:41:22] 2025-05-18 11:41:02,728 | INFO     | chi2: 4.043256684054926
[2025-05-18 13:41:22] 2025-05-18 11:41:02,728 | INFO     | current chi2=4.043256684054926 (change=16.520674923806926 %)
[2025-05-18 13:41:22] 2025-05-18 11:41:02,728 | INFO     | right removable region: 130
[2025-05-18 13:41:22] 2025-05-18 11:41:02,729 | INFO     | sum of square deviations: 697054930.0
[2025-05-18 13:41:22] 2025-05-18 11:41:02,729 | INFO     | sum of deviations: 19167274759.0
[2025-05-18 13:41:22] 2025-05-18 11:41:02,729 | INFO     | mean x: 1747564473.0
[2025-05-18 13:41:22] 2025-05-18 11:41:02,729 | INFO     | mean y: 2259167.618320611
[2025-05-18 13:41:22] 2025-05-18 11:41:02,729 | INFO     | -- intersect: -48051412030.22836
[2025-05-18 13:41:22] 2025-05-18 11:41:02,730 | INFO     | intersect: -48051412030.22836
[2025-05-18 13:41:22] 2025-05-18 11:41:02,730 | INFO     | chi2: 2.3608023811179386
[2025-05-18 13:41:22] 2025-05-18 11:41:02,730 | INFO     | current chi2=2.3608023811179386 (change=51.25756170979774 %)
[2025-05-18 13:41:22] 2025-05-18 11:41:02,731 | INFO     | sum of square deviations: 620244187.5
[2025-05-18 13:41:22] 2025-05-18 11:41:02,731 | INFO     | sum of deviations: -5181884821.5
[2025-05-18 13:41:22] 2025-05-18 11:41:02,731 | INFO     | mean x: 1747564625.5
[2025-05-18 13:41:22] 2025-05-18 11:41:02,731 | INFO     | mean y: 2307528.404761905
[2025-05-18 13:41:22] 2025-05-18 11:41:02,731 | INFO     | -- intersect: 14602490472.430792
[2025-05-18 13:41:22] 2025-05-18 11:41:02,732 | INFO     | intersect: 14602490472.430792
[2025-05-18 13:41:22] 2025-05-18 11:41:02,732 | INFO     | chi2: 0.8764468946329596
[2025-05-18 13:41:22] 2025-05-18 11:41:02,732 | INFO     | current chi2=0.8764468946329596 (change=62.875041907661696 %)
[2025-05-18 13:41:22] 2025-05-18 11:41:02,732 | INFO     | sum of square deviations: 549294020.0
[2025-05-18 13:41:22] 2025-05-18 11:41:02,733 | INFO     | sum of deviations: -7428535714.0
[2025-05-18 13:41:22] 2025-05-18 11:41:02,733 | INFO     | mean x: 1747564778.0
[2025-05-18 13:41:22] 2025-05-18 11:41:02,733 | INFO     | mean y: 2312240.8925619833
[2025-05-18 13:41:22] 2025-05-18 11:41:02,733 | INFO     | -- intersect: 23636007298.962704
[2025-05-18 13:41:22] 2025-05-18 11:41:02,733 | INFO     | intersect: 23636007298.962704
[2025-05-18 13:41:22] 2025-05-18 11:41:02,733 | INFO     | chi2: 0.8429241690682066
[2025-05-18 13:41:22] 2025-05-18 11:41:02,733 | INFO     | current chi2=0.8429241690682066 (change=3.824843897563437 %)
[2025-05-18 13:41:22] 2025-05-18 11:41:02,734 | INFO     | left removable region: 30
[2025-05-18 13:41:22] 2025-05-18 11:41:02,734 | INFO     | sum of square deviations: 310052325.0
[2025-05-18 13:41:22] 2025-05-18 11:41:02,734 | INFO     | sum of deviations: 131676795.99999994
[2025-05-18 13:41:22] 2025-05-18 11:41:02,734 | INFO     | mean x: 1747565052.5
[2025-05-18 13:41:22] 2025-05-18 11:41:02,734 | INFO     | mean y: 2329513.42
[2025-05-18 13:41:22] 2025-05-18 11:41:02,734 | INFO     | -- intersect: -739847688.1693501
[2025-05-18 13:41:22] 2025-05-18 11:41:02,735 | INFO     | intersect: -739847688.1693501
[2025-05-18 13:41:22] 2025-05-18 11:41:02,735 | INFO     | chi2: 0.0006881937157386776
[2025-05-18 13:41:22] 2025-05-18 11:41:02,735 | INFO     | -- intersect: -739847688.1693501
[2025-05-18 13:41:22] 2025-05-18 11:41:02,735 | INFO     | current memory leak: 0.42 B/s (using 100 data points, chi2=0.00)
[2025-05-18 13:41:22] 2025-05-18 11:41:02,735 | INFO     | sufficient remaining disk space (3388075933696 B)
[2025-05-18 13:41:22] 2025-05-18 11:41:02,736 | INFO     | ..............................
[2025-05-18 13:41:22] 2025-05-18 11:41:02,736 | INFO     | . Timing measurements:
[2025-05-18 13:41:22] 2025-05-18 11:41:02,736 | INFO     | . get job = 0 s
[2025-05-18 13:41:22] 2025-05-18 11:41:02,736 | INFO     | . initial setup = 1 s
[2025-05-18 13:41:22] 2025-05-18 11:41:02,737 | INFO     | . payload setup = 5 s
[2025-05-18 13:41:22] 2025-05-18 11:41:02,737 | INFO     | . stage-in = 0 s
[2025-05-18 13:41:22] 2025-05-18 11:41:02,737 | INFO     | . payload execution = 8252 s
[2025-05-18 13:41:22] 2025-05-18 11:41:02,737 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-05-18 13:41:22] 2025-05-18 11:41:02,737 | INFO     | . stage-out = 0 s
[2025-05-18 13:41:22] 2025-05-18 11:41:02,737 | INFO     | . log creation = 0 s
[2025-05-18 13:41:22] 2025-05-18 11:41:02,737 | INFO     | ..............................
[2025-05-18 13:41:22] 2025-05-18 11:41:02,817 | INFO     | 
[2025-05-18 13:41:22] 2025-05-18 11:41:02,818 | INFO     | job summary report
[2025-05-18 13:41:22] 2025-05-18 11:41:02,818 | INFO     | size of work directory /scratch/boinc/var/slot128/slots/0/PanDA_Pilot-6652828903: 2603378 B (within 2537553920 B limit)
[2025-05-18 13:41:22] 2025-05-18 11:41:02,818 | INFO     | --------------------------------------------------
[2025-05-18 13:41:22] 2025-05-18 11:41:02,818 | INFO     | pfn file=/scratch/boinc/var/slot128/slots/0/PanDA_Pilot-6652828903/HITS.44638099._048837.pool.root.1 does not exist (skip from workdir size calculation)
[2025-05-18 13:41:22] 2025-05-18 11:41:02,819 | INFO     | PanDA job id: 6652828903
[2025-05-18 13:41:22] 2025-05-18 11:41:02,819 | INFO     | total size of present files: 0 B (workdir size: 2603378 B)
[2025-05-18 13:41:22] 2025-05-18 11:41:02,819 | INFO     | task id: 44638099
[2025-05-18 13:41:22] 2025-05-18 11:41:02,819 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot128/slots/0/PanDA_Pilot-6652828903/HITS.44638099._048837.pool.root.1 since it does not exist
[2025-05-18 13:41:22] 2025-05-18 11:41:02,820 | INFO     | errors: (none)
[2025-05-18 13:41:22] 2025-05-18 11:41:02,820 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-18 13:41:22] 2025-05-18 11:41:02,820 | INFO     | pilot state: finished 
[2025-05-18 13:41:22] 2025-05-18 11:41:02,820 | INFO     | transexitcode: 0
[2025-05-18 13:41:22] 2025-05-18 11:41:02,821 | INFO     | exeerrorcode: 0
[2025-05-18 13:41:22] 2025-05-18 11:41:02,821 | INFO     | exeerrordiag: 
[2025-05-18 13:41:22] 2025-05-18 11:41:02,821 | INFO     | exitcode: 0
[2025-05-18 13:41:22] 2025-05-18 11:41:02,821 | INFO     | exitmsg: OK
[2025-05-18 13:41:22] 2025-05-18 11:41:02,821 | INFO     | cpuconsumptiontime: 30124 s
[2025-05-18 13:41:22] 2025-05-18 11:41:02,821 | INFO     | nevents: 400
[2025-05-18 13:41:22] 2025-05-18 11:41:02,821 | INFO     | neventsw: 0
[2025-05-18 13:41:22] 2025-05-18 11:41:02,821 | INFO     | pid: 1570333
[2025-05-18 13:41:22] 2025-05-18 11:41:02,821 | INFO     | pgrp: 1570333
[2025-05-18 13:41:22] 2025-05-18 11:41:02,821 | INFO     | corecount: 4
[2025-05-18 13:41:22] 2025-05-18 11:41:02,821 | INFO     | event service: False
[2025-05-18 13:41:22] 2025-05-18 11:41:02,821 | INFO     | sizes: {0: 2393553, 1: 2393752, 4: 2393958, 11: 2393986, 8261: 2421652, 8262: 2430617, 8264: 2430801, 8270: 2430971}
[2025-05-18 13:41:22] 2025-05-18 11:41:02,821 | INFO     | --------------------------------------------------
[2025-05-18 13:41:22] 2025-05-18 11:41:02,821 | INFO     | 
[2025-05-18 13:41:22] 2025-05-18 11:41:02,821 | INFO     | executing command: ls -lF /scratch/boinc/var/slot128/slots/0
[2025-05-18 13:41:22] 2025-05-18 11:41:02,839 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-18 13:41:22] 2025-05-18 11:41:02,839 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-18 13:41:22] 2025-05-18 11:41:02,839 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-18 13:41:22] 2025-05-18 11:41:02,839 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-18 13:41:22] 2025-05-18 11:41:02,839 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-18 13:41:22] 2025-05-18 11:41:02,839 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-18 13:41:22] 2025-05-18 11:41:02,839 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-18 13:41:22] 2025-05-18 11:41:02,839 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-18 13:41:22] 2025-05-18 11:41:02,840 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-18 13:41:22] 2025-05-18 11:41:02,840 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-18 13:41:22] 2025-05-18 11:41:02,840 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-18 13:41:22] 2025-05-18 11:41:02,840 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-18 13:41:22] 2025-05-18 11:41:02,840 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-18 13:41:22] 2025-05-18 11:41:02,840 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-18 13:41:22] 2025-05-18 11:41:02,840 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-18 13:41:22] 2025-05-18 11:41:02,840 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-18 13:41:22] 2025-05-18 11:41:02,840 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-18 13:41:22] 2025-05-18 11:41:02,841 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-18 13:41:22] 2025-05-18 11:41:02,841 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-18 13:41:22] 2025-05-18 11:41:02,841 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-18 13:41:22] 2025-05-18 11:41:02,841 | INFO     | job 6652828903 has completed (purged errors)
[2025-05-18 13:41:22] 2025-05-18 11:41:02,841 | INFO     | overall cleanup function is called
[2025-05-18 13:41:22] 2025-05-18 11:41:03,150 | INFO     | number of running child processes to parent process 1570333: 1
[2025-05-18 13:41:22] 2025-05-18 11:41:03,150 | INFO     | maximum number of monitored processes: 6
[2025-05-18 13:41:22] 2025-05-18 11:41:03,150 | INFO     | aborting job monitoring since job object (job id=6652828903) has expired
[2025-05-18 13:41:22] 2025-05-18 11:41:03,850 | INFO     | --- collectZombieJob: --- 10, [1570333]
[2025-05-18 13:41:22] 2025-05-18 11:41:03,850 | INFO     | zombie collector waiting for pid 1570333
[2025-05-18 13:41:22] 2025-05-18 11:41:03,850 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-18 13:41:22] 2025-05-18 11:41:03,850 | INFO     | collected zombie processes
[2025-05-18 13:41:22] 2025-05-18 11:41:03,850 | INFO     | will attempt to kill all subprocesses of pid=1570333
[2025-05-18 13:41:22] 2025-05-18 11:41:04,158 | INFO     | process IDs to be killed: [1570333] (in reverse order)
[2025-05-18 13:41:22] 2025-05-18 11:41:04,295 | WARNING  | found no corresponding commands to process id(s)
[2025-05-18 13:41:22] 2025-05-18 11:41:04,296 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-18 13:41:22] 2025-05-18 11:41:04,306 | INFO     | did not find any defunct processes belonging to 1570333
[2025-05-18 13:41:22] 2025-05-18 11:41:04,315 | INFO     | did not find any defunct processes belonging to 1570333
[2025-05-18 13:41:22] 2025-05-18 11:41:04,316 | INFO     | ready for new job
[2025-05-18 13:41:22] 2025-05-18 11:41:04,316 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-18 13:41:22] 2025-05-18 11:41:04,317 | INFO     | **************************************
[2025-05-18 13:41:22] 2025-05-18 11:41:04,317 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-18 13:41:22] 2025-05-18 11:41:04,317 | INFO     | **************************************
[2025-05-18 13:41:22] 2025-05-18 11:41:04,317 | INFO     | 
[2025-05-18 13:41:22] 2025-05-18 11:41:04,322 | INFO     | architecture information:
[2025-05-18 13:41:22] 2025-05-18 11:41:04,322 | INFO     | executing command: cat /etc/os-release
[2025-05-18 13:41:22] 2025-05-18 11:41:04,334 | INFO     | cat /etc/os-release:
[2025-05-18 13:41:22] NAME="CentOS Linux"
[2025-05-18 13:41:22] VERSION="7 (Core)"
[2025-05-18 13:41:22] ID="centos"
[2025-05-18 13:41:22] ID_LIKE="rhel fedora"
[2025-05-18 13:41:22] VERSION_ID="7"
[2025-05-18 13:41:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-18 13:41:22] ANSI_COLOR="0;31"
[2025-05-18 13:41:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-18 13:41:22] HOME_URL="https://www.centos.org/"
[2025-05-18 13:41:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-18 13:41:22] 
[2025-05-18 13:41:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-18 13:41:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-18 13:41:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-18 13:41:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-18 13:41:22] 
[2025-05-18 13:41:22] 2025-05-18 11:41:04,335 | INFO     | **************************************
[2025-05-18 13:41:22] 2025-05-18 11:41:04,838 | INFO     | executing command: df -mP /scratch/boinc/var/slot128/slots/0
[2025-05-18 13:41:22] 2025-05-18 11:41:04,854 | INFO     | sufficient remaining disk space (3387629240320 B)
[2025-05-18 13:41:22] 2025-05-18 11:41:04,854 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-18 13:41:22] 2025-05-18 11:41:04,854 | INFO     | current server update state: UPDATING_FINAL
[2025-05-18 13:41:22] 2025-05-18 11:41:04,854 | INFO     | update_server=False
[2025-05-18 13:41:22] 2025-05-18 11:41:04,854 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-18 13:41:22] 2025-05-18 11:41:04,855 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-18 13:41:22] 2025-05-18 11:41:04,855 | INFO     | aborting loop
[2025-05-18 13:41:22] 2025-05-18 11:41:04,855 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-18 13:41:22] 2025-05-18 11:41:04,855 | INFO     | found 0 job(s) in 20 queues
[2025-05-18 13:41:22] 2025-05-18 11:41:04,855 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-18 13:41:22] 2025-05-18 11:41:04,855 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-18 13:41:22] 2025-05-18 11:41:05,019 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-18 13:41:22] 2025-05-18 11:41:05,210 | INFO     | all data control threads have been joined
[2025-05-18 13:41:22] 2025-05-18 11:41:05,767 | INFO     | all payload control threads have been joined
[2025-05-18 13:41:22] 2025-05-18 11:41:05,860 | INFO     | [job] retrieve thread has finished
[2025-05-18 13:41:22] 2025-05-18 11:41:05,860 | INFO     | [job] job monitor thread has finished
[2025-05-18 13:41:22] 2025-05-18 11:41:05,941 | INFO     | [job] create_data_payload thread has finished
[2025-05-18 13:41:22] 2025-05-18 11:41:05,992 | INFO     | [job] validate thread has finished
[2025-05-18 13:41:22] 2025-05-18 11:41:06,100 | INFO     | [payload] validate_pre thread has finished
[2025-05-18 13:41:22] 2025-05-18 11:41:06,172 | INFO     | [payload] validate_post thread has finished
[2025-05-18 13:41:22] 2025-05-18 11:41:06,215 | INFO     | [data] control thread has finished
[2025-05-18 13:41:22] 2025-05-18 11:41:06,328 | INFO     | all job control threads have been joined
[2025-05-18 13:41:22] 2025-05-18 11:41:06,643 | INFO     | [payload] failed_post thread has finished
[2025-05-18 13:41:22] 2025-05-18 11:41:06,773 | INFO     | [payload] control thread has finished
[2025-05-18 13:41:22] 2025-05-18 11:41:06,939 | INFO     | [payload] execute_payloads thread has finished
[2025-05-18 13:41:22] 2025-05-18 11:41:07,020 | INFO     | [data] copytool_out thread has finished
[2025-05-18 13:41:22] 2025-05-18 11:41:07,144 | INFO     | [data] copytool_in thread has finished
[2025-05-18 13:41:22] 2025-05-18 11:41:07,304 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-18 13:41:22] 2025-05-18 11:41:07,333 | INFO     | [job] control thread has finished
[2025-05-18 13:41:22] 2025-05-18 11:41:07,828 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-18 13:41:22] 2025-05-18 11:41:08,834 | INFO     | [job] queue monitor thread has finished
[2025-05-18 13:41:22] 2025-05-18 11:41:11,308 | INFO     | [data] queue_monitor thread has finished
[2025-05-18 13:41:22] 2025-05-18 11:41:15,845 | INFO     | job.realtimelogging is not enabled
[2025-05-18 13:41:22] 2025-05-18 11:41:16,848 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-18 13:41:22] 2025-05-18 11:41:17,602 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23363644090176)>', '<ExcThread(monitor, started 23363338614528)>']
[2025-05-18 13:41:22] 2025-05-18 11:41:17,921 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-18 13:41:22] 2025-05-18 11:41:17,924 | INFO     | [monitor] control thread has ended
[2025-05-18 13:41:22] 2025-05-18 11:41:22,616 | INFO     | all workflow threads have been joined
[2025-05-18 13:41:22] 2025-05-18 11:41:22,616 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-18 13:41:22] 2025-05-18 11:41:22,616 | INFO     | traces error code: 0
[2025-05-18 13:41:22] 2025-05-18 11:41:22,616 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-18 13:41:22] 2025-05-18 11:41:22,696 [wrapper] ==== pilot stdout END ====
[2025-05-18 13:41:22] 2025-05-18 11:41:22,699 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-18 13:41:22] 2025-05-18 11:41:22,701 [wrapper] pilotpid: 1560574
[2025-05-18 13:41:22] 2025-05-18 11:41:22,703 [wrapper] Pilot exit status: 0
[2025-05-18 13:41:22] 2025-05-18 11:41:22,712 [wrapper] pandaids: 6652828903
[2025-05-18 13:41:22] 2025-05-18 11:41:22,788 [wrapper] cleanup supervisor_pilot 2171954 1560575
[2025-05-18 13:41:22] 2025-05-18 11:41:22,791 [wrapper] Test setup, not cleaning
[2025-05-18 13:41:22] 2025-05-18 11:41:22,793 [wrapper] apfmon messages muted
[2025-05-18 13:41:22] 2025-05-18 11:41:22,795 [wrapper] ==== wrapper stdout END ====
[2025-05-18 13:41:22] 2025-05-18 11:41:22,797 [wrapper] ==== wrapper stderr END ====
[2025-05-18 13:41:22]  *** Error codes and diagnostics ***
[2025-05-18 13:41:22]     "exeErrorCode": 0,
[2025-05-18 13:41:22]     "exeErrorDiag": "",
[2025-05-18 13:41:22]     "pilotErrorCode": 0,
[2025-05-18 13:41:22]     "pilotErrorDiag": "",
[2025-05-18 13:41:22]  *** Listing of results directory ***
[2025-05-18 13:41:22] total 413456
[2025-05-18 13:41:22] -rw-r--r-- 1 boinc boinc    495897 May 17 04:35 pilot3.tar.gz
[2025-05-18 13:41:22] -rw-r--r-- 1 boinc boinc      5111 May 17 04:42 queuedata.json
[2025-05-18 13:41:22] -rwx------ 1 boinc boinc     37140 May 17 04:42 runpilot2-wrapper.sh
[2025-05-18 13:41:22] -rw-r--r-- 1 boinc boinc       100 May 18 11:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-18 13:41:22] -rwxr-xr-x 1 boinc boinc      7986 May 18 11:22 run_atlas
[2025-05-18 13:41:22] -rw-r--r-- 1 boinc boinc       105 May 18 11:22 job.xml
[2025-05-18 13:41:22] -rw-r--r-- 1 boinc boinc      6673 May 18 11:22 init_data.xml
[2025-05-18 13:41:22] -rw-r--r-- 2 boinc boinc 219544535 May 18 11:22 EVNT.44638096._001956.pool.root.1
[2025-05-18 13:41:22] -rw-r--r-- 2 boinc boinc     17569 May 18 11:22 start_atlas.sh
[2025-05-18 13:41:22] drwxrwx--x 2 boinc boinc      4096 May 18 11:22 shared
[2025-05-18 13:41:22] -rw-r--r-- 2 boinc boinc    508877 May 18 11:22 input.tar.gz
[2025-05-18 13:41:22] -rw-r--r-- 1 boinc boinc         0 May 18 11:22 boinc_lockfile
[2025-05-18 13:41:22] -rw-r--r-- 1 boinc boinc      2539 May 18 11:22 pandaJob.out
[2025-05-18 13:41:22] -rw------- 1 boinc boinc       424 May 18 11:22 setup.sh.local
[2025-05-18 13:41:22] -rw------- 1 boinc boinc    994635 May 18 11:22 agis_schedconf.cvmfs.json
[2025-05-18 13:41:22] -rw------- 1 boinc boinc   1596741 May 18 11:22 agis_ddmendpoints.agis.ALL.json
[2025-05-18 13:41:22] drwx------ 4 boinc boinc      4096 May 18 11:22 pilot3
[2025-05-18 13:41:22] -rw------- 1 boinc boinc 197875845 May 18 13:40 HITS.44638099._048837.pool.root.1
[2025-05-18 13:41:22] -rw-r--r-- 1 boinc boinc       529 May 18 13:40 boinc_task_state.xml
[2025-05-18 13:41:22] -rw------- 1 boinc boinc        95 May 18 13:40 pilot_heartbeat.json
[2025-05-18 13:41:22] -rw------- 1 boinc boinc      1026 May 18 13:40 memory_monitor_summary.json
[2025-05-18 13:41:22] -rw------- 1 boinc boinc    276271 May 18 13:40 log.44638099._048837.job.log.tgz.1
[2025-05-18 13:41:22] -rw------- 1 boinc boinc      7690 May 18 13:41 heartbeat.json
[2025-05-18 13:41:22] -rw-r--r-- 1 boinc boinc      8192 May 18 13:41 boinc_mmap_file
[2025-05-18 13:41:22] -rw-r--r-- 1 boinc boinc        27 May 18 13:41 wrapper_checkpoint.txt
[2025-05-18 13:41:22] -rw------- 1 boinc boinc      4560 May 18 13:41 pilotlog.txt
[2025-05-18 13:41:22] -rw------- 1 boinc boinc    779689 May 18 13:41 log.44638099._048837.job.log.1
[2025-05-18 13:41:22] -rw------- 1 boinc boinc       357 May 18 13:41 output.list
[2025-05-18 13:41:22] -rw-r--r-- 1 boinc boinc       620 May 18 13:41 runtime_log
[2025-05-18 13:41:22] -rw------- 1 boinc boinc   1075200 May 18 13:41 result.tar.gz
[2025-05-18 13:41:22] -rw------- 1 boinc boinc       662 May 18 13:41 thbLDmVgMa7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWVNKDmrZrAYm.diag
[2025-05-18 13:41:22] -rw-r--r-- 1 boinc boinc     11442 May 18 13:41 runtime_log.err
[2025-05-18 13:41:22] -rw-r--r-- 1 boinc boinc     21031 May 18 13:41 stderr.txt
[2025-05-18 13:41:22] HITS file was successfully produced:
[2025-05-18 13:41:22] -rw------- 1 boinc boinc 197875845 May 18 13:40 shared/HITS.pool.root.1
[2025-05-18 13:41:22]  *** Contents of shared directory: ***
[2025-05-18 13:41:22] total 409220
[2025-05-18 13:41:22] -rw-r--r-- 2 boinc boinc 219544535 May 18 11:22 ATLAS.root_0
[2025-05-18 13:41:22] -rw-r--r-- 2 boinc boinc     17569 May 18 11:22 start_atlas.sh
[2025-05-18 13:41:22] -rw-r--r-- 2 boinc boinc    508877 May 18 11:22 input.tar.gz
[2025-05-18 13:41:22] -rw------- 1 boinc boinc 197875845 May 18 13:40 HITS.pool.root.1
[2025-05-18 13:41:22] -rw------- 1 boinc boinc   1075200 May 18 13:41 result.tar.gz
13:41:24 (1556617): run_atlas exited; CPU time 30447.245994
13:41:24 (1556617): called boinc_finish(0)

</stderr_txt>
]]>

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