Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:31:09 (5761): wrapper (7.7.26015): starting
16:31:09 (5761): wrapper: running run_atlas (--nthreads 8)
[2025-05-17 16:31:09] Arguments: --nthreads 8
[2025-05-17 16:31:09] Threads: 8
[2025-05-17 16:31:09] Checking for CVMFS
[2025-05-17 16:31:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 16:31:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 16:31:10] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 16:31:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 16:31:10] 2.11.2.0 31738 7408 88280 146104 3 16 18233687 25165824 4637 130560 0 3265754 99.745 6152020 977 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-17 16:31:10] CVMFS is ok
[2025-05-17 16:31:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 16:31:10] Checking for apptainer binary...
[2025-05-17 16:31:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 16:31:10] Running /usr/bin/apptainer --version
[2025-05-17 16:31:11] apptainer version 1.3.2-1.el7
[2025-05-17 16:31:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 17:01:56] cg-vwn375.simple-grid.lan
[2025-05-17 17:01:56] apptainer works
[2025-05-17 17:01:56] Set ATHENA_PROC_NUMBER=8
[2025-05-17 17:01:56] Set ATHENA_CORE_NUMBER=8
[2025-05-17 17:01:56] Starting ATLAS job with PandaID=6652056519
[2025-05-17 17:01:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 22:39:42]  *** The last 200 lines of the pilot log: ***
[2025-05-17 22:39:42] 2025-05-17 20:18:04,641 | INFO     | intersect: -52911301754.66671
[2025-05-17 22:39:42] 2025-05-17 20:18:04,642 | INFO     | chi2: 8.632145662011649
[2025-05-17 22:39:42] 2025-05-17 20:18:04,642 | INFO     | current chi2=8.632145662011649 (change=8.325475941166417 %)
[2025-05-17 22:39:42] 2025-05-17 20:18:04,642 | INFO     | right removable region: 293
[2025-05-17 22:39:42] 2025-05-17 20:18:04,643 | INFO     | sum of square deviations: 7879803557.5
[2025-05-17 22:39:42] 2025-05-17 20:18:04,645 | INFO     | sum of deviations: 125968148301.5
[2025-05-17 22:39:42] 2025-05-17 20:18:04,646 | INFO     | mean x: 1747504008.5
[2025-05-17 22:39:42] 2025-05-17 20:18:04,646 | INFO     | mean y: 2442219.8401360544
[2025-05-17 22:39:42] 2025-05-17 20:18:04,646 | INFO     | -- intersect: -27933513606.199974
[2025-05-17 22:39:42] 2025-05-17 20:18:04,646 | INFO     | intersect: -27933513606.199974
[2025-05-17 22:39:42] 2025-05-17 20:18:04,646 | INFO     | chi2: 5.049518411740188
[2025-05-17 22:39:42] 2025-05-17 20:18:04,646 | INFO     | current chi2=5.049518411740188 (change=46.37344928506209 %)
[2025-05-17 22:39:42] 2025-05-17 20:18:04,647 | INFO     | sum of square deviations: 7484568240.0
[2025-05-17 22:39:42] 2025-05-17 20:18:04,649 | INFO     | sum of deviations: 57232090695.00003
[2025-05-17 22:39:42] 2025-05-17 20:18:04,650 | INFO     | mean x: 1747504161.0
[2025-05-17 22:39:42] 2025-05-17 20:18:04,650 | INFO     | mean y: 2468734.598615917
[2025-05-17 22:39:42] 2025-05-17 20:18:04,650 | INFO     | -- intersect: -13360134614.74862
[2025-05-17 22:39:42] 2025-05-17 20:18:04,650 | INFO     | intersect: -13360134614.74862
[2025-05-17 22:39:42] 2025-05-17 20:18:04,650 | INFO     | chi2: 2.9630586403834296
[2025-05-17 22:39:42] 2025-05-17 20:18:04,651 | INFO     | current chi2=2.9630586403834296 (change=41.31997551500586 %)
[2025-05-17 22:39:42] 2025-05-17 20:18:04,651 | INFO     | sum of square deviations: 7102775035.0
[2025-05-17 22:39:42] 2025-05-17 20:18:04,653 | INFO     | sum of deviations: -5050316635.999996
[2025-05-17 22:39:42] 2025-05-17 20:18:04,654 | INFO     | mean x: 1747504313.5
[2025-05-17 22:39:42] 2025-05-17 20:18:04,654 | INFO     | mean y: 2493612.1971830986
[2025-05-17 22:39:42] 2025-05-17 20:18:04,654 | INFO     | -- intersect: 1245029108.8815157
[2025-05-17 22:39:42] 2025-05-17 20:18:04,654 | INFO     | intersect: 1245029108.8815157
[2025-05-17 22:39:42] 2025-05-17 20:18:04,654 | INFO     | chi2: 1.282182754006484
[2025-05-17 22:39:42] 2025-05-17 20:18:04,655 | INFO     | current chi2=1.282182754006484 (change=56.72772936277206 %)
[2025-05-17 22:39:42] 2025-05-17 20:18:04,655 | INFO     | sum of square deviations: 6734191380.0
[2025-05-17 22:39:42] 2025-05-17 20:18:04,657 | INFO     | sum of deviations: -30143974354.000004
[2025-05-17 22:39:42] 2025-05-17 20:18:04,658 | INFO     | mean x: 1747504466.0
[2025-05-17 22:39:42] 2025-05-17 20:18:04,658 | INFO     | mean y: 2503937.917562724
[2025-05-17 22:39:42] 2025-05-17 20:18:04,658 | INFO     | -- intersect: 7824783827.8313055
[2025-05-17 22:39:42] 2025-05-17 20:18:04,658 | INFO     | intersect: 7824783827.8313055
[2025-05-17 22:39:42] 2025-05-17 20:18:04,659 | INFO     | chi2: 0.9076043269898659
[2025-05-17 22:39:42] 2025-05-17 20:18:04,659 | INFO     | current chi2=0.9076043269898659 (change=29.214121453915915 %)
[2025-05-17 22:39:42] 2025-05-17 20:18:04,659 | INFO     | sum of square deviations: 6378584712.5
[2025-05-17 22:39:42] 2025-05-17 20:18:04,662 | INFO     | sum of deviations: -31715302878.0
[2025-05-17 22:39:42] 2025-05-17 20:18:04,662 | INFO     | mean x: 1747504618.5
[2025-05-17 22:39:42] 2025-05-17 20:18:04,662 | INFO     | mean y: 2504595.189781022
[2025-05-17 22:39:42] 2025-05-17 20:18:04,662 | INFO     | -- intersect: 8691365957.777094
[2025-05-17 22:39:42] 2025-05-17 20:18:04,662 | INFO     | intersect: 8691365957.777094
[2025-05-17 22:39:42] 2025-05-17 20:18:04,662 | INFO     | chi2: 0.8943978884940151
[2025-05-17 22:39:42] 2025-05-17 20:18:04,663 | INFO     | current chi2=0.8943978884940151 (change=1.4550876525292558 %)
[2025-05-17 22:39:42] 2025-05-17 20:18:04,663 | INFO     | left removable region: 50
[2025-05-17 22:39:42] 2025-05-17 20:18:04,663 | INFO     | sum of square deviations: 4449281562.0
[2025-05-17 22:39:42] 2025-05-17 20:18:04,665 | INFO     | sum of deviations: 645332969.0000004
[2025-05-17 22:39:42] 2025-05-17 20:18:04,665 | INFO     | mean x: 1747505198.0
[2025-05-17 22:39:42] 2025-05-17 20:18:04,665 | INFO     | mean y: 2506177.765432099
[2025-05-17 22:39:42] 2025-05-17 20:18:04,665 | INFO     | -- intersect: -250955578.26273665
[2025-05-17 22:39:42] 2025-05-17 20:18:04,665 | INFO     | intersect: -250955578.26273665
[2025-05-17 22:39:42] 2025-05-17 20:18:04,666 | INFO     | chi2: 0.022490452463079878
[2025-05-17 22:39:42] 2025-05-17 20:18:04,666 | INFO     | -- intersect: -250955578.26273665
[2025-05-17 22:39:42] 2025-05-17 20:18:04,666 | INFO     | current memory leak: 0.15 B/s (using 243 data points, chi2=0.02)
[2025-05-17 22:39:42] 2025-05-17 20:18:04,667 | INFO     | ..............................
[2025-05-17 22:39:42] 2025-05-17 20:18:04,667 | INFO     | . Timing measurements:
[2025-05-17 22:39:42] 2025-05-17 20:18:04,667 | INFO     | . get job = 0 s
[2025-05-17 22:39:42] 2025-05-17 20:18:04,667 | INFO     | . initial setup = 6 s
[2025-05-17 22:39:42] 2025-05-17 20:18:04,667 | INFO     | . payload setup = 126 s
[2025-05-17 22:39:42] 2025-05-17 20:18:04,668 | INFO     | . stage-in = 0 s
[2025-05-17 22:39:42] 2025-05-17 20:18:04,668 | INFO     | . payload execution = 18372 s
[2025-05-17 22:39:42] 2025-05-17 20:18:04,668 | INFO     | . stage-out = 3 s
[2025-05-17 22:39:42] 2025-05-17 20:18:04,668 | INFO     | . log creation = 0 s
[2025-05-17 22:39:42] 2025-05-17 20:18:04,668 | INFO     | ..............................
[2025-05-17 22:39:42] 2025-05-17 20:18:04,784 | INFO     | 
[2025-05-17 22:39:42] 2025-05-17 20:18:04,784 | INFO     | job summary report
[2025-05-17 22:39:42] 2025-05-17 20:18:04,785 | INFO     | --------------------------------------------------
[2025-05-17 22:39:42] 2025-05-17 20:18:04,785 | INFO     | PanDA job id: 6652056519
[2025-05-17 22:39:42] 2025-05-17 20:18:04,785 | INFO     | task id: 44638099
[2025-05-17 22:39:42] 2025-05-17 20:18:04,785 | INFO     | errors: (none)
[2025-05-17 22:39:42] 2025-05-17 20:18:04,785 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 22:39:42] 2025-05-17 20:18:04,785 | INFO     | pilot state: finished 
[2025-05-17 22:39:42] 2025-05-17 20:18:04,785 | INFO     | transexitcode: 0
[2025-05-17 22:39:42] 2025-05-17 20:18:04,785 | INFO     | exeerrorcode: 0
[2025-05-17 22:39:42] 2025-05-17 20:18:04,785 | INFO     | exeerrordiag: 
[2025-05-17 22:39:42] 2025-05-17 20:18:04,785 | INFO     | exitcode: 0
[2025-05-17 22:39:42] 2025-05-17 20:18:04,785 | INFO     | exitmsg: OK
[2025-05-17 22:39:42] 2025-05-17 20:18:04,785 | INFO     | cpuconsumptiontime: 67298 s
[2025-05-17 22:39:42] 2025-05-17 20:18:04,785 | INFO     | nevents: 400
[2025-05-17 22:39:42] 2025-05-17 20:18:04,785 | INFO     | neventsw: 0
[2025-05-17 22:39:42] 2025-05-17 20:18:04,786 | INFO     | pid: 6252
[2025-05-17 22:39:42] 2025-05-17 20:18:04,786 | INFO     | pgrp: 6252
[2025-05-17 22:39:42] 2025-05-17 20:18:04,786 | INFO     | corecount: 8
[2025-05-17 22:39:42] 2025-05-17 20:18:04,786 | INFO     | event service: False
[2025-05-17 22:39:42] 2025-05-17 20:18:04,786 | INFO     | sizes: {0: 2392885, 1: 2393570, 2: 2393769, 12: 2393769, 23: 2393797, 34: 2393825, 45: 2393981, 55: 2394009, 66: 2394037, 77: 2394065, 87: 2394121, 92: 2394635, 98
[2025-05-17 22:39:42] 2025-05-17 20:18:04,786 | INFO     | --------------------------------------------------
[2025-05-17 22:39:42] 2025-05-17 20:18:04,786 | INFO     | 
[2025-05-17 22:39:42] 2025-05-17 20:18:04,786 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-05-17 22:39:42] 2025-05-17 20:18:05,367 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 22:39:42] 2025-05-17 20:18:05,368 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 22:39:42] 2025-05-17 20:18:05,368 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 22:39:42] 2025-05-17 20:18:05,368 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 22:39:42] 2025-05-17 20:18:05,368 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 22:39:42] 2025-05-17 20:18:05,368 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 22:39:42] 2025-05-17 20:18:05,368 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 22:39:42] 2025-05-17 20:18:05,368 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 22:39:42] 2025-05-17 20:18:05,368 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 22:39:42] 2025-05-17 20:18:05,368 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 22:39:42] 2025-05-17 20:18:05,368 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 22:39:42] 2025-05-17 20:18:05,369 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 22:39:42] 2025-05-17 20:18:05,369 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 22:39:42] 2025-05-17 20:18:05,369 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 22:39:42] 2025-05-17 20:18:05,369 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 22:39:42] 2025-05-17 20:18:05,369 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 22:39:42] 2025-05-17 20:18:05,369 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 22:39:42] 2025-05-17 20:18:05,369 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 22:39:42] 2025-05-17 20:18:05,369 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 22:39:42] 2025-05-17 20:18:05,369 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 22:39:42] 2025-05-17 20:18:05,369 | INFO     | job 6652056519 has completed (purged errors)
[2025-05-17 22:39:42] 2025-05-17 20:18:05,370 | INFO     | overall cleanup function is called
[2025-05-17 22:39:42] 2025-05-17 20:18:06,385 | INFO     | --- collectZombieJob: --- 10, [6252]
[2025-05-17 22:39:42] 2025-05-17 20:18:06,385 | INFO     | zombie collector waiting for pid 6252
[2025-05-17 22:39:42] 2025-05-17 20:18:06,385 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 22:39:42] 2025-05-17 20:18:06,385 | INFO     | collected zombie processes
[2025-05-17 22:39:42] 2025-05-17 20:18:06,385 | INFO     | will attempt to kill all subprocesses of pid=6252
[2025-05-17 22:39:42] 2025-05-17 20:18:06,498 | INFO     | process IDs to be killed: [6252] (in reverse order)
[2025-05-17 22:39:42] 2025-05-17 20:18:07,360 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 22:39:42] 2025-05-17 20:18:07,361 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 22:39:42] 2025-05-17 20:18:07,364 | INFO     | did not find any defunct processes belonging to 6252
[2025-05-17 22:39:42] 2025-05-17 20:18:07,367 | INFO     | did not find any defunct processes belonging to 6252
[2025-05-17 22:39:42] 2025-05-17 20:18:07,367 | INFO     | ready for new job
[2025-05-17 22:39:42] 2025-05-17 20:18:07,368 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 22:39:42] 2025-05-17 20:18:07,370 | INFO     | **************************************
[2025-05-17 22:39:42] 2025-05-17 20:18:07,370 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 22:39:42] 2025-05-17 20:18:07,370 | INFO     | **************************************
[2025-05-17 22:39:42] 2025-05-17 20:18:07,370 | INFO     | 
[2025-05-17 22:39:42] 2025-05-17 20:18:07,371 | INFO     | pilot is running in a VM
[2025-05-17 22:39:42] 2025-05-17 20:18:07,371 | INFO     | architecture information:
[2025-05-17 22:39:42] 2025-05-17 20:18:07,378 | INFO     | executing command: cat /etc/os-release
[2025-05-17 22:39:42] 2025-05-17 20:18:07,640 | INFO     | cat /etc/os-release:
[2025-05-17 22:39:42] NAME="CentOS Linux"
[2025-05-17 22:39:42] VERSION="7 (Core)"
[2025-05-17 22:39:42] ID="centos"
[2025-05-17 22:39:42] ID_LIKE="rhel fedora"
[2025-05-17 22:39:42] VERSION_ID="7"
[2025-05-17 22:39:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 22:39:42] ANSI_COLOR="0;31"
[2025-05-17 22:39:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 22:39:42] HOME_URL="https://www.centos.org/"
[2025-05-17 22:39:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 22:39:42] 
[2025-05-17 22:39:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 22:39:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 22:39:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 22:39:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 22:39:42] 
[2025-05-17 22:39:42] 2025-05-17 20:18:07,641 | INFO     | **************************************
[2025-05-17 22:39:42] 2025-05-17 20:18:08,144 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-05-17 22:39:42] 2025-05-17 20:18:08,455 | INFO     | sufficient remaining disk space (496180920320 B)
[2025-05-17 22:39:42] 2025-05-17 20:18:08,455 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 22:39:42] 2025-05-17 20:18:08,455 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 22:39:42] 2025-05-17 20:18:08,456 | INFO     | update_server=False
[2025-05-17 22:39:42] 2025-05-17 20:18:08,456 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 22:39:42] 2025-05-17 20:18:08,456 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 22:39:42] 2025-05-17 20:18:08,456 | INFO     | aborting loop
[2025-05-17 22:39:42] 2025-05-17 20:18:08,457 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 22:39:42] 2025-05-17 20:18:08,716 | INFO     | PID=30076 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-05-17 22:39:42] 2025-05-17 20:18:08,716 | INFO     | .. there are 9 such processes running
[2025-05-17 22:39:42] 2025-05-17 20:18:08,716 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 22:39:42] 2025-05-17 20:18:08,716 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 22:39:42] 2025-05-17 20:18:08,716 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 22:39:42] 2025-05-17 20:18:09,425 | INFO     | all data control threads have been joined
[2025-05-17 22:39:42] 2025-05-17 20:18:09,462 | INFO     | [job] retrieve thread has finished
[2025-05-17 22:39:42] 2025-05-17 20:18:09,467 | INFO     | [job] job monitor thread has finished
[2025-05-17 22:39:42] 2025-05-17 20:18:09,484 | INFO     | all payload control threads have been joined
[2025-05-17 22:39:42] 2025-05-17 20:18:09,517 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 22:39:42] 2025-05-17 20:18:09,544 | INFO     | all job control threads have been joined
[2025-05-17 22:39:42] 2025-05-17 20:18:09,693 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 22:39:42] 2025-05-17 20:18:09,798 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 22:39:42] 2025-05-17 20:18:09,868 | INFO     | [payload] validate_post thread has finished
[2025-05-17 22:39:42] 2025-05-17 20:18:10,036 | INFO     | [payload] failed_post thread has finished
[2025-05-17 22:39:42] 2025-05-17 20:18:10,351 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 22:39:42] 2025-05-17 20:18:10,431 | INFO     | [data] control thread has finished
[2025-05-17 22:39:42] 2025-05-17 20:18:10,450 | INFO     | [job] validate thread has finished
[2025-05-17 22:39:42] 2025-05-17 20:18:10,485 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 22:39:42] 2025-05-17 20:18:10,491 | INFO     | [payload] control thread has finished
[2025-05-17 22:39:42] 2025-05-17 20:18:10,534 | INFO     | [data] copytool_in thread has finished
[2025-05-17 22:39:42] 2025-05-17 20:18:10,550 | INFO     | [job] control thread has finished
[2025-05-17 22:39:42] 2025-05-17 20:18:10,804 | INFO     | [job] queue monitor thread has finished
[2025-05-17 22:39:42] 2025-05-17 20:18:11,524 | INFO     | [data] copytool_out thread has finished
[2025-05-17 22:39:42] 2025-05-17 20:18:12,473 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 22:39:42] 2025-05-17 20:18:19,507 | INFO     | job.realtimelogging is not enabled
[2025-05-17 22:39:42] 2025-05-17 20:18:20,513 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 22:39:42] 2025-05-17 20:18:22,165 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140673287731008)>', '<ExcThread(monitor, started 140672711513856)>']
[2025-05-17 22:39:42] 2025-05-17 20:18:22,799 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 22:39:42] 2025-05-17 20:18:22,799 | INFO     | [monitor] control thread has ended
[2025-05-17 22:39:42] 2025-05-17 20:18:27,191 | INFO     | all workflow threads have been joined
[2025-05-17 22:39:42] 2025-05-17 20:18:27,191 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 22:39:42] 2025-05-17 20:18:27,191 | INFO     | traces error code: 0
[2025-05-17 22:39:42] 2025-05-17 20:18:27,191 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 22:39:42] 2025-05-17 20:18:27,592 [wrapper] ==== pilot stdout END ====
[2025-05-17 22:39:42] 2025-05-17 20:18:27,653 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 22:39:42] 2025-05-17 20:18:27,755 [wrapper] pilotpid: 30076
[2025-05-17 22:39:42] 2025-05-17 20:18:27,818 [wrapper] Pilot exit status: 0
[2025-05-17 22:39:42] 2025-05-17 20:18:28,314 [wrapper] pandaids: 6652056519
[2025-05-17 22:39:42] 2025-05-17 20:18:29,123 [wrapper] cleanup supervisor_pilot 23871 30077
[2025-05-17 22:39:42] 2025-05-17 20:18:29,181 [wrapper] Test setup, not cleaning
[2025-05-17 22:39:42] 2025-05-17 20:18:29,270 [wrapper] apfmon messages muted
[2025-05-17 22:39:42] 2025-05-17 20:18:29,309 [wrapper] ==== wrapper stdout END ====
[2025-05-17 22:39:42] 2025-05-17 20:18:29,369 [wrapper] ==== wrapper stderr END ====
[2025-05-17 22:39:42]  *** Error codes and diagnostics ***
[2025-05-17 22:39:42]     "exeErrorCode": 0,
[2025-05-17 22:39:42]     "exeErrorDiag": "",
[2025-05-17 22:39:42]     "pilotErrorCode": 0,
[2025-05-17 22:39:42]     "pilotErrorDiag": "",
[2025-05-17 22:39:42]  *** Listing of results directory ***
[2025-05-17 22:39:42] total 410788
[2025-05-17 22:39:42] -rw-r--r--. 1 boinc boinc      5111 May 16 21:35 queuedata.json
[2025-05-17 22:39:42] -rw-r--r--. 1 boinc boinc    495897 May 16 21:35 pilot3.tar.gz
[2025-05-17 22:39:42] -rwx------. 1 boinc boinc     37140 May 16 21:37 runpilot2-wrapper.sh
[2025-05-17 22:39:42] -rw-r--r--. 1 boinc boinc       100 May 17 16:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 22:39:42] -rwxr-xr-x. 1 boinc boinc      7986 May 17 16:31 run_atlas
[2025-05-17 22:39:42] -rw-r--r--. 1 boinc boinc       105 May 17 16:31 job.xml
[2025-05-17 22:39:42] -rw-r--r--. 2 boinc boinc 220225399 May 17 16:31 EVNT.44638096._001183.pool.root.1
[2025-05-17 22:39:42] -rw-r--r--. 2 boinc boinc     17569 May 17 16:31 start_atlas.sh
[2025-05-17 22:39:42] drwxrwx--x. 2 boinc boinc        68 May 17 16:31 shared
[2025-05-17 22:39:42] -rw-r--r--. 2 boinc boinc    508876 May 17 16:31 input.tar.gz
[2025-05-17 22:39:42] -rw-r--r--. 1 boinc boinc      6371 May 17 16:31 init_data.xml
[2025-05-17 22:39:42] -rw-r--r--. 1 boinc boinc         0 May 17 16:31 boinc_lockfile
[2025-05-17 22:39:42] -rw-r--r--. 1 boinc boinc      2540 May 17 17:01 pandaJob.out
[2025-05-17 22:39:42] -rw-------. 1 boinc boinc       424 May 17 17:02 setup.sh.local
[2025-05-17 22:39:42] -rw-------. 1 boinc boinc    994619 May 17 17:05 agis_schedconf.cvmfs.json
[2025-05-17 22:39:42] drwx------. 4 boinc boinc      4096 May 17 17:05 pilot3
[2025-05-17 22:39:42] -rw-------. 1 boinc boinc 192546494 May 17 22:15 HITS.44638099._044376.pool.root.1
[2025-05-17 22:39:42] -rw-r--r--. 1 boinc boinc       531 May 17 22:15 boinc_task_state.xml
[2025-05-17 22:39:42] -rw-------. 1 boinc boinc      1014 May 17 22:16 memory_monitor_summary.json
[2025-05-17 22:39:42] -rw-------. 1 boinc boinc   1596741 May 17 22:16 agis_ddmendpoints.agis.ALL.json
[2025-05-17 22:39:42] -rw-------. 1 boinc boinc    418601 May 17 22:16 log.44638099._044376.job.log.tgz.1
[2025-05-17 22:39:42] -rw-------. 1 boinc boinc        95 May 17 22:17 pilot_heartbeat.json
[2025-05-17 22:39:42] -rw-------. 1 boinc boinc      7688 May 17 22:18 heartbeat.json
[2025-05-17 22:39:42] -rw-------. 1 boinc boinc      4880 May 17 22:18 pilotlog.txt
[2025-05-17 22:39:42] -rw-------. 1 boinc boinc   1604985 May 17 22:18 log.44638099._044376.job.log.1
[2025-05-17 22:39:42] -rw-------. 1 boinc boinc       357 May 17 22:18 output.list
[2025-05-17 22:39:42] -rw-r--r--. 1 boinc boinc       620 May 17 22:18 runtime_log
[2025-05-17 22:39:42] -rw-------. 1 boinc boinc   2037760 May 17 22:18 result.tar.gz
[2025-05-17 22:39:42] -rw-r--r--. 1 boinc boinc     11013 May 17 22:18 runtime_log.err
[2025-05-17 22:39:42] -rw-------. 1 boinc boinc       657 May 17 22:18 nAfMDmp2Fa7n9Rq4apOajLDm4fhM0noT9bVof3QYDmGPJKDmHlggbm.diag
[2025-05-17 22:39:42] -rw-r--r--. 1 boinc boinc      8192 May 17 22:39 boinc_mmap_file
[2025-05-17 22:39:42] -rw-r--r--. 1 boinc boinc        28 May 17 22:39 wrapper_checkpoint.txt
[2025-05-17 22:39:42] -rw-r--r--. 1 boinc boinc     20591 May 17 22:39 stderr.txt
[2025-05-17 22:39:42] HITS file was successfully produced:
[2025-05-17 22:39:42] -rw-------. 1 boinc boinc 192546494 May 17 22:15 shared/HITS.pool.root.1
[2025-05-17 22:39:42]  *** Contents of shared directory: ***
[2025-05-17 22:39:43] total 405612
[2025-05-17 22:39:43] -rw-r--r--. 2 boinc boinc 220225399 May 17 16:31 ATLAS.root_0
[2025-05-17 22:39:43] -rw-r--r--. 2 boinc boinc     17569 May 17 16:31 start_atlas.sh
[2025-05-17 22:39:43] -rw-r--r--. 2 boinc boinc    508876 May 17 16:31 input.tar.gz
[2025-05-17 22:39:43] -rw-------. 1 boinc boinc 192546494 May 17 22:15 HITS.pool.root.1
[2025-05-17 22:39:43] -rw-------. 1 boinc boinc   2037760 May 17 22:18 result.tar.gz
22:39:44 (5761): run_atlas exited; CPU time 67557.477213
22:39:44 (5761): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN