Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:18:12 (10923): wrapper (7.7.26015): starting
16:18:12 (10923): wrapper: running run_atlas (--nthreads 8)
[2025-05-17 16:18:12] Arguments: --nthreads 8
[2025-05-17 16:18:12] Threads: 8
[2025-05-17 16:18:12] Checking for CVMFS
[2025-05-17 16:18:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 16:18:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 16:18:13] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 16:18:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 16:18:14] 2.11.2.0 23356 7386 76920 146103 0 16 19861748 25165825 4632 130560 0 5920988 99.742 7161597 1148 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-17 16:18:14] CVMFS is ok
[2025-05-17 16:18:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 16:18:14] Checking for apptainer binary...
[2025-05-17 16:18:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 16:18:14] Running /usr/bin/apptainer --version
[2025-05-17 16:18:14] apptainer version 1.3.2-1.el7
[2025-05-17 16:18:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 16:18:26] cg-vwn419.simple-grid.lan
[2025-05-17 16:18:26] apptainer works
[2025-05-17 16:18:26] Set ATHENA_PROC_NUMBER=8
[2025-05-17 16:18:26] Set ATHENA_CORE_NUMBER=8
[2025-05-17 16:18:27] Starting ATLAS job with PandaID=6652821082
[2025-05-17 16:18:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 21:55:44]  *** The last 200 lines of the pilot log: ***
[2025-05-17 21:55:45] 2025-05-17 19:28:29,418 | INFO     | -- intersect: -37400428458.108116
[2025-05-17 21:55:45] 2025-05-17 19:28:29,419 | INFO     | intersect: -37400428458.108116
[2025-05-17 21:55:45] 2025-05-17 19:28:29,419 | INFO     | chi2: 8.855471720407262
[2025-05-17 21:55:45] 2025-05-17 19:28:29,419 | INFO     | sum of square deviations: 7407141672.0
[2025-05-17 21:55:45] 2025-05-17 19:28:29,422 | INFO     | sum of deviations: 183388912820.0
[2025-05-17 21:55:45] 2025-05-17 19:28:29,422 | INFO     | mean x: 1747500925.5
[2025-05-17 21:55:45] 2025-05-17 19:28:29,422 | INFO     | mean y: 2436342.8125
[2025-05-17 21:55:45] 2025-05-17 19:28:29,422 | INFO     | -- intersect: -43262875577.819115
[2025-05-17 21:55:45] 2025-05-17 19:28:29,423 | INFO     | intersect: -43262875577.819115
[2025-05-17 21:55:45] 2025-05-17 19:28:29,423 | INFO     | chi2: 8.142535829087716
[2025-05-17 21:55:45] 2025-05-17 19:28:29,423 | INFO     | current chi2=8.142535829087716 (change=8.050795190013414 %)
[2025-05-17 21:55:45] 2025-05-17 19:28:29,423 | INFO     | right removable region: 287
[2025-05-17 21:55:45] 2025-05-17 19:28:29,424 | INFO     | sum of square deviations: 7407141672.0
[2025-05-17 21:55:45] 2025-05-17 19:28:29,431 | INFO     | sum of deviations: 70864925276.5
[2025-05-17 21:55:45] 2025-05-17 19:28:29,440 | INFO     | mean x: 1747501230.5
[2025-05-17 21:55:45] 2025-05-17 19:28:29,440 | INFO     | mean y: 2467350.5104166665
[2025-05-17 21:55:45] 2025-05-17 19:28:29,440 | INFO     | -- intersect: -16716065871.028093
[2025-05-17 21:55:45] 2025-05-17 19:28:29,440 | INFO     | intersect: -16716065871.028093
[2025-05-17 21:55:45] 2025-05-17 19:28:29,441 | INFO     | chi2: 4.393535354782907
[2025-05-17 21:55:45] 2025-05-17 19:28:29,441 | INFO     | current chi2=4.393535354782907 (change=50.386207607008785 %)
[2025-05-17 21:55:45] 2025-05-17 19:28:29,441 | INFO     | sum of square deviations: 7028008982.0
[2025-05-17 21:55:45] 2025-05-17 19:28:29,444 | INFO     | sum of deviations: 8077391737.999992
[2025-05-17 21:55:45] 2025-05-17 19:28:29,444 | INFO     | mean x: 1747501383.0
[2025-05-17 21:55:45] 2025-05-17 19:28:29,444 | INFO     | mean y: 2492580.901060071
[2025-05-17 21:55:45] 2025-05-17 19:28:29,444 | INFO     | -- intersect: -2005935875.7698793
[2025-05-17 21:55:45] 2025-05-17 19:28:29,444 | INFO     | intersect: -2005935875.7698793
[2025-05-17 21:55:45] 2025-05-17 19:28:29,445 | INFO     | chi2: 2.5617720094191254
[2025-05-17 21:55:45] 2025-05-17 19:28:29,445 | INFO     | current chi2=2.5617720094191254 (change=41.69224092779134 %)
[2025-05-17 21:55:45] 2025-05-17 19:28:29,445 | INFO     | sum of square deviations: 6662039329.5
[2025-05-17 21:55:45] 2025-05-17 19:28:29,448 | INFO     | sum of deviations: -44673869964.00001
[2025-05-17 21:55:45] 2025-05-17 19:28:29,448 | INFO     | mean x: 1747501535.5
[2025-05-17 21:55:45] 2025-05-17 19:28:29,448 | INFO     | mean y: 2514562.496402878
[2025-05-17 21:55:45] 2025-05-17 19:28:29,448 | INFO     | -- intersect: 11720796682.676634
[2025-05-17 21:55:45] 2025-05-17 19:28:29,448 | INFO     | intersect: 11720796682.676634
[2025-05-17 21:55:45] 2025-05-17 19:28:29,449 | INFO     | chi2: 1.276838894799964
[2025-05-17 21:55:45] 2025-05-17 19:28:29,449 | INFO     | current chi2=1.276838894799964 (change=50.157980877873534 %)
[2025-05-17 21:55:45] 2025-05-17 19:28:29,449 | INFO     | sum of square deviations: 6309000152.0
[2025-05-17 21:55:45] 2025-05-17 19:28:29,452 | INFO     | sum of deviations: -62859642096.0
[2025-05-17 21:55:45] 2025-05-17 19:28:29,452 | INFO     | mean x: 1747501688.0
[2025-05-17 21:55:45] 2025-05-17 19:28:29,452 | INFO     | mean y: 2522355.0512820515
[2025-05-17 21:55:45] 2025-05-17 19:28:29,452 | INFO     | -- intersect: 17413733010.19977
[2025-05-17 21:55:45] 2025-05-17 19:28:29,452 | INFO     | intersect: 17413733010.19977
[2025-05-17 21:55:45] 2025-05-17 19:28:29,452 | INFO     | chi2: 0.992294667262965
[2025-05-17 21:55:45] 2025-05-17 19:28:29,453 | INFO     | current chi2=0.992294667262965 (change=22.285053243273666 %)
[2025-05-17 21:55:45] 2025-05-17 19:28:29,453 | INFO     | left removable region: 40
[2025-05-17 21:55:45] 2025-05-17 19:28:29,453 | INFO     | sum of square deviations: 4672638308.0
[2025-05-17 21:55:45] 2025-05-17 19:28:29,455 | INFO     | sum of deviations: -8613760223.999998
[2025-05-17 21:55:45] 2025-05-17 19:28:29,455 | INFO     | mean x: 1747502115.0
[2025-05-17 21:55:45] 2025-05-17 19:28:29,455 | INFO     | mean y: 2513472.850202429
[2025-05-17 21:55:45] 2025-05-17 19:28:29,455 | INFO     | -- intersect: 3223940687.4864078
[2025-05-17 21:55:45] 2025-05-17 19:28:29,455 | INFO     | intersect: 3223940687.4864078
[2025-05-17 21:55:45] 2025-05-17 19:28:29,456 | INFO     | chi2: 0.10327145965975498
[2025-05-17 21:55:45] 2025-05-17 19:28:29,456 | INFO     | -- intersect: 3223940687.4864078
[2025-05-17 21:55:45] 2025-05-17 19:28:29,456 | INFO     | current memory leak: -1.84 B/s (using 247 data points, chi2=0.10)
[2025-05-17 21:55:45] 2025-05-17 19:28:29,457 | INFO     | ..............................
[2025-05-17 21:55:45] 2025-05-17 19:28:29,457 | INFO     | . Timing measurements:
[2025-05-17 21:55:45] 2025-05-17 19:28:29,457 | INFO     | . get job = 0 s
[2025-05-17 21:55:45] 2025-05-17 19:28:29,457 | INFO     | . initial setup = 9 s
[2025-05-17 21:55:45] 2025-05-17 19:28:29,457 | INFO     | . payload setup = 120 s
[2025-05-17 21:55:45] 2025-05-17 19:28:29,457 | INFO     | . stage-in = 0 s
[2025-05-17 21:55:45] 2025-05-17 19:28:29,457 | INFO     | . payload execution = 18004 s
[2025-05-17 21:55:45] 2025-05-17 19:28:29,458 | INFO     | . stage-out = 3 s
[2025-05-17 21:55:45] 2025-05-17 19:28:29,458 | INFO     | . log creation = 1 s
[2025-05-17 21:55:45] 2025-05-17 19:28:29,458 | INFO     | ..............................
[2025-05-17 21:55:45] 2025-05-17 19:28:29,608 | INFO     | 
[2025-05-17 21:55:45] 2025-05-17 19:28:29,609 | INFO     | job summary report
[2025-05-17 21:55:45] 2025-05-17 19:28:29,609 | INFO     | --------------------------------------------------
[2025-05-17 21:55:45] 2025-05-17 19:28:29,609 | INFO     | PanDA job id: 6652821082
[2025-05-17 21:55:45] 2025-05-17 19:28:29,609 | INFO     | task id: 44638099
[2025-05-17 21:55:45] 2025-05-17 19:28:29,609 | INFO     | errors: (none)
[2025-05-17 21:55:45] 2025-05-17 19:28:29,609 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 21:55:45] 2025-05-17 19:28:29,609 | INFO     | pilot state: finished 
[2025-05-17 21:55:45] 2025-05-17 19:28:29,609 | INFO     | transexitcode: 0
[2025-05-17 21:55:45] 2025-05-17 19:28:29,609 | INFO     | exeerrorcode: 0
[2025-05-17 21:55:45] 2025-05-17 19:28:29,609 | INFO     | exeerrordiag: 
[2025-05-17 21:55:45] 2025-05-17 19:28:29,610 | INFO     | exitcode: 0
[2025-05-17 21:55:45] 2025-05-17 19:28:29,610 | INFO     | exitmsg: OK
[2025-05-17 21:55:45] 2025-05-17 19:28:29,610 | INFO     | cpuconsumptiontime: 66126 s
[2025-05-17 21:55:45] 2025-05-17 19:28:29,610 | INFO     | nevents: 400
[2025-05-17 21:55:45] 2025-05-17 19:28:29,610 | INFO     | neventsw: 0
[2025-05-17 21:55:45] 2025-05-17 19:28:29,610 | INFO     | pid: 25269
[2025-05-17 21:55:45] 2025-05-17 19:28:29,610 | INFO     | pgrp: 25269
[2025-05-17 21:55:45] 2025-05-17 19:28:29,610 | INFO     | corecount: 8
[2025-05-17 21:55:45] 2025-05-17 19:28:29,610 | INFO     | event service: False
[2025-05-17 21:55:45] 2025-05-17 19:28:29,610 | INFO     | sizes: {0: 2392885, 1: 2393571, 2: 2393770, 13: 2393770, 23: 2393826, 34: 2393854, 45: 2394010, 56: 2394038, 66: 2394066, 77: 2394094, 88: 2394150, 97: 2394664, 98
[2025-05-17 21:55:45] 2025-05-17 19:28:29,610 | INFO     | --------------------------------------------------
[2025-05-17 21:55:45] 2025-05-17 19:28:29,611 | INFO     | 
[2025-05-17 21:55:45] 2025-05-17 19:28:29,611 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-05-17 21:55:45] 2025-05-17 19:28:30,210 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 21:55:45] 2025-05-17 19:28:30,211 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 21:55:45] 2025-05-17 19:28:30,211 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 21:55:45] 2025-05-17 19:28:30,211 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 21:55:45] 2025-05-17 19:28:30,211 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 21:55:45] 2025-05-17 19:28:30,211 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 21:55:45] 2025-05-17 19:28:30,211 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 21:55:45] 2025-05-17 19:28:30,211 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 21:55:45] 2025-05-17 19:28:30,211 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 21:55:45] 2025-05-17 19:28:30,211 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 21:55:45] 2025-05-17 19:28:30,211 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 21:55:45] 2025-05-17 19:28:30,211 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 21:55:45] 2025-05-17 19:28:30,212 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 21:55:45] 2025-05-17 19:28:30,212 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 21:55:45] 2025-05-17 19:28:30,212 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 21:55:45] 2025-05-17 19:28:30,212 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 21:55:45] 2025-05-17 19:28:30,212 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 21:55:45] 2025-05-17 19:28:30,212 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 21:55:45] 2025-05-17 19:28:30,212 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 21:55:45] 2025-05-17 19:28:30,212 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 21:55:45] 2025-05-17 19:28:30,212 | INFO     | job 6652821082 has completed (purged errors)
[2025-05-17 21:55:45] 2025-05-17 19:28:30,212 | INFO     | overall cleanup function is called
[2025-05-17 21:55:45] 2025-05-17 19:28:31,222 | INFO     | --- collectZombieJob: --- 10, [25269]
[2025-05-17 21:55:45] 2025-05-17 19:28:31,222 | INFO     | zombie collector waiting for pid 25269
[2025-05-17 21:55:45] 2025-05-17 19:28:31,222 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 21:55:45] 2025-05-17 19:28:31,222 | INFO     | collected zombie processes
[2025-05-17 21:55:45] 2025-05-17 19:28:31,222 | INFO     | will attempt to kill all subprocesses of pid=25269
[2025-05-17 21:55:45] 2025-05-17 19:28:31,333 | INFO     | process IDs to be killed: [25269] (in reverse order)
[2025-05-17 21:55:45] 2025-05-17 19:28:32,197 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 21:55:45] 2025-05-17 19:28:32,198 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 21:55:45] 2025-05-17 19:28:32,201 | INFO     | did not find any defunct processes belonging to 25269
[2025-05-17 21:55:45] 2025-05-17 19:28:32,204 | INFO     | did not find any defunct processes belonging to 25269
[2025-05-17 21:55:45] 2025-05-17 19:28:32,204 | INFO     | ready for new job
[2025-05-17 21:55:45] 2025-05-17 19:28:32,204 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 21:55:45] 2025-05-17 19:28:32,206 | INFO     | **************************************
[2025-05-17 21:55:45] 2025-05-17 19:28:32,206 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 21:55:45] 2025-05-17 19:28:32,207 | INFO     | **************************************
[2025-05-17 21:55:45] 2025-05-17 19:28:32,207 | INFO     | 
[2025-05-17 21:55:45] 2025-05-17 19:28:32,207 | INFO     | pilot is running in a VM
[2025-05-17 21:55:45] 2025-05-17 19:28:32,207 | INFO     | architecture information:
[2025-05-17 21:55:45] 2025-05-17 19:28:32,222 | INFO     | executing command: cat /etc/os-release
[2025-05-17 21:55:45] 2025-05-17 19:28:32,560 | INFO     | cat /etc/os-release:
[2025-05-17 21:55:45] NAME="CentOS Linux"
[2025-05-17 21:55:45] VERSION="7 (Core)"
[2025-05-17 21:55:45] ID="centos"
[2025-05-17 21:55:45] ID_LIKE="rhel fedora"
[2025-05-17 21:55:45] VERSION_ID="7"
[2025-05-17 21:55:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 21:55:45] ANSI_COLOR="0;31"
[2025-05-17 21:55:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 21:55:45] HOME_URL="https://www.centos.org/"
[2025-05-17 21:55:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 21:55:45] 
[2025-05-17 21:55:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 21:55:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 21:55:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 21:55:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 21:55:45] 
[2025-05-17 21:55:45] 2025-05-17 19:28:32,561 | INFO     | **************************************
[2025-05-17 21:55:45] 2025-05-17 19:28:33,064 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-05-17 21:55:45] 2025-05-17 19:28:33,255 | INFO     | sufficient remaining disk space (495989030912 B)
[2025-05-17 21:55:45] 2025-05-17 19:28:33,256 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 21:55:45] 2025-05-17 19:28:33,256 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 21:55:45] 2025-05-17 19:28:33,256 | INFO     | update_server=False
[2025-05-17 21:55:45] 2025-05-17 19:28:33,256 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 21:55:45] 2025-05-17 19:28:33,256 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-17 21:55:45] 2025-05-17 19:28:33,257 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 21:55:45] 2025-05-17 19:28:33,257 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 21:55:45] 2025-05-17 19:28:33,257 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 21:55:45] 2025-05-17 19:28:33,257 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 21:55:45] 2025-05-17 19:28:33,565 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-17 21:55:45] 2025-05-17 19:28:33,565 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-17 21:55:45] 2025-05-17 19:28:33,565 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 21:55:45] 2025-05-17 19:28:33,565 | INFO     | will abort loop
[2025-05-17 21:55:45] 2025-05-17 19:28:33,583 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 21:55:45] 2025-05-17 19:28:33,653 | INFO     | all payload control threads have been joined
[2025-05-17 21:55:45] 2025-05-17 19:28:33,977 | INFO     | all job control threads have been joined
[2025-05-17 21:55:45] 2025-05-17 19:28:34,262 | INFO     | [job] retrieve thread has finished
[2025-05-17 21:55:45] 2025-05-17 19:28:34,287 | INFO     | all data control threads have been joined
[2025-05-17 21:55:45] 2025-05-17 19:28:34,571 | INFO     | [job] job monitor thread has finished
[2025-05-17 21:55:45] 2025-05-17 19:28:34,623 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 21:55:45] 2025-05-17 19:28:34,659 | INFO     | [payload] control thread has finished
[2025-05-17 21:55:45] 2025-05-17 19:28:34,687 | INFO     | [payload] failed_post thread has finished
[2025-05-17 21:55:45] 2025-05-17 19:28:34,699 | INFO     | [payload] validate_post thread has finished
[2025-05-17 21:55:45] 2025-05-17 19:28:34,910 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 21:55:45] 2025-05-17 19:28:34,963 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 21:55:45] 2025-05-17 19:28:34,983 | INFO     | [job] control thread has finished
[2025-05-17 21:55:45] 2025-05-17 19:28:35,148 | INFO     | [job] validate thread has finished
[2025-05-17 21:55:45] 2025-05-17 19:28:35,161 | INFO     | [data] copytool_in thread has finished
[2025-05-17 21:55:45] 2025-05-17 19:28:35,263 | INFO     | [data] copytool_out thread has finished
[2025-05-17 21:55:45] 2025-05-17 19:28:35,293 | INFO     | [data] control thread has finished
[2025-05-17 21:55:45] 2025-05-17 19:28:35,460 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 21:55:45] 2025-05-17 19:28:35,629 | INFO     | [job] queue monitor thread has finished
[2025-05-17 21:55:45] 2025-05-17 19:28:35,643 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 21:55:45] 2025-05-17 19:28:37,595 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 21:55:45] 2025-05-17 19:28:37,702 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140520873518912)>', '<ExcThread(monitor, started 140520441501440)>']
[2025-05-17 21:55:45] 2025-05-17 19:28:38,284 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 21:55:45] 2025-05-17 19:28:38,284 | INFO     | [monitor] control thread has ended
[2025-05-17 21:55:45] 2025-05-17 19:28:42,728 | INFO     | all workflow threads have been joined
[2025-05-17 21:55:45] 2025-05-17 19:28:42,728 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 21:55:45] 2025-05-17 19:28:42,728 | INFO     | traces error code: 0
[2025-05-17 21:55:45] 2025-05-17 19:28:42,729 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 21:55:45] 2025-05-17 19:28:43,068 [wrapper] ==== pilot stdout END ====
[2025-05-17 21:55:45] 2025-05-17 19:28:43,107 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 21:55:45] 2025-05-17 19:28:43,197 [wrapper] pilotpid: 16695
[2025-05-17 21:55:45] 2025-05-17 19:28:43,314 [wrapper] Pilot exit status: 0
[2025-05-17 21:55:45] 2025-05-17 19:28:43,834 [wrapper] pandaids: 6652821082
[2025-05-17 21:55:45] 2025-05-17 19:28:44,683 [wrapper] cleanup supervisor_pilot 13583 16696
[2025-05-17 21:55:45] 2025-05-17 19:28:44,749 [wrapper] Test setup, not cleaning
[2025-05-17 21:55:45] 2025-05-17 19:28:44,863 [wrapper] apfmon messages muted
[2025-05-17 21:55:45] 2025-05-17 19:28:44,954 [wrapper] ==== wrapper stdout END ====
[2025-05-17 21:55:45] 2025-05-17 19:28:45,026 [wrapper] ==== wrapper stderr END ====
[2025-05-17 21:55:45]  *** Error codes and diagnostics ***
[2025-05-17 21:55:45]     "exeErrorCode": 0,
[2025-05-17 21:55:45]     "exeErrorDiag": "",
[2025-05-17 21:55:45]     "pilotErrorCode": 0,
[2025-05-17 21:55:45]     "pilotErrorDiag": "",
[2025-05-17 21:55:45]  *** Listing of results directory ***
[2025-05-17 21:55:45] total 416684
[2025-05-17 21:55:45] -rwx------. 1 boinc boinc     37140 May 17 00:48 runpilot2-wrapper.sh
[2025-05-17 21:55:45] -rw-r--r--. 1 boinc boinc      5111 May 17 00:48 queuedata.json
[2025-05-17 21:55:45] -rw-r--r--. 1 boinc boinc    495897 May 17 00:48 pilot3.tar.gz
[2025-05-17 21:55:45] -rw-r--r--. 1 boinc boinc       100 May 17 16:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 21:55:45] -rwxr-xr-x. 1 boinc boinc      7986 May 17 16:18 run_atlas
[2025-05-17 21:55:45] -rw-r--r--. 1 boinc boinc       105 May 17 16:18 job.xml
[2025-05-17 21:55:45] -rw-r--r--. 1 boinc boinc      6372 May 17 16:18 init_data.xml
[2025-05-17 21:55:45] -rw-r--r--. 2 boinc boinc 223359204 May 17 16:18 EVNT.44638096._001251.pool.root.1
[2025-05-17 21:55:45] -rw-r--r--. 2 boinc boinc     17569 May 17 16:18 start_atlas.sh
[2025-05-17 21:55:45] drwxrwx--x. 2 boinc boinc        68 May 17 16:18 shared
[2025-05-17 21:55:45] -rw-r--r--. 2 boinc boinc    508874 May 17 16:18 input.tar.gz
[2025-05-17 21:55:45] -rw-r--r--. 1 boinc boinc         0 May 17 16:18 boinc_lockfile
[2025-05-17 21:55:45] -rw-r--r--. 1 boinc boinc      2540 May 17 16:18 pandaJob.out
[2025-05-17 21:55:45] -rw-------. 1 boinc boinc       424 May 17 16:18 setup.sh.local
[2025-05-17 21:55:45] -rw-------. 1 boinc boinc    994635 May 17 16:21 agis_schedconf.cvmfs.json
[2025-05-17 21:55:45] drwx------. 4 boinc boinc      4096 May 17 16:21 pilot3
[2025-05-17 21:55:45] -rw-------. 1 boinc boinc 195521913 May 17 21:25 HITS.44638099._046332.pool.root.1
[2025-05-17 21:55:45] -rw-r--r--. 1 boinc boinc       531 May 17 21:25 boinc_task_state.xml
[2025-05-17 21:55:45] -rw-------. 1 boinc boinc      1017 May 17 21:26 memory_monitor_summary.json
[2025-05-17 21:55:45] -rw-------. 1 boinc boinc   1596741 May 17 21:26 agis_ddmendpoints.agis.ALL.json
[2025-05-17 21:55:45] -rw-------. 1 boinc boinc    418852 May 17 21:26 log.44638099._046332.job.log.tgz.1
[2025-05-17 21:55:45] -rw-------. 1 boinc boinc        95 May 17 21:27 pilot_heartbeat.json
[2025-05-17 21:55:45] -rw-------. 1 boinc boinc      7693 May 17 21:28 heartbeat.json
[2025-05-17 21:55:45] -rw-------. 1 boinc boinc      4726 May 17 21:28 pilotlog.txt
[2025-05-17 21:55:45] -rw-------. 1 boinc boinc   1568169 May 17 21:28 log.44638099._046332.job.log.1
[2025-05-17 21:55:45] -rw-------. 1 boinc boinc       357 May 17 21:28 output.list
[2025-05-17 21:55:45] -rw-r--r--. 1 boinc boinc       620 May 17 21:28 runtime_log
[2025-05-17 21:55:45] -rw-------. 1 boinc boinc   2007040 May 17 21:28 result.tar.gz
[2025-05-17 21:55:45] -rw-------. 1 boinc boinc       657 May 17 21:28 sSNODmM2Ia7n9Rq4apOajLDm4fhM0noT9bVof3QYDmoZJKDmFE3Gwn.diag
[2025-05-17 21:55:45] -rw-r--r--. 1 boinc boinc     11031 May 17 21:28 runtime_log.err
[2025-05-17 21:55:45] -rw-r--r--. 1 boinc boinc      8192 May 17 21:55 boinc_mmap_file
[2025-05-17 21:55:45] -rw-r--r--. 1 boinc boinc        28 May 17 21:55 wrapper_checkpoint.txt
[2025-05-17 21:55:45] -rw-r--r--. 1 boinc boinc     20529 May 17 21:55 stderr.txt
[2025-05-17 21:55:45] HITS file was successfully produced:
[2025-05-17 21:55:45] -rw-------. 1 boinc boinc 195521913 May 17 21:25 shared/HITS.pool.root.1
[2025-05-17 21:55:45]  *** Contents of shared directory: ***
[2025-05-17 21:55:45] total 411548
[2025-05-17 21:55:45] -rw-r--r--. 2 boinc boinc 223359204 May 17 16:18 ATLAS.root_0
[2025-05-17 21:55:45] -rw-r--r--. 2 boinc boinc     17569 May 17 16:18 start_atlas.sh
[2025-05-17 21:55:45] -rw-r--r--. 2 boinc boinc    508874 May 17 16:18 input.tar.gz
[2025-05-17 21:55:45] -rw-------. 1 boinc boinc 195521913 May 17 21:25 HITS.pool.root.1
[2025-05-17 21:55:45] -rw-------. 1 boinc boinc   2007040 May 17 21:28 result.tar.gz
21:55:46 (10923): run_atlas exited; CPU time 66362.198606
21:55:46 (10923): called boinc_finish(0)

</stderr_txt>
]]>

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