Stderr output

<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-16 19:49:29 (16508): Detected: vboxwrapper 26206
2025-05-16 19:49:29 (16508): Detected: BOINC client v7.16.20
2025-05-16 19:49:30 (16508): Detected: VirtualBox VboxManage Interface (Version: 6.0.14)
2025-05-16 19:49:30 (16508): Successfully copied 'init_data.xml' to the shared directory.
2025-05-16 19:49:30 (16508): Create VM. (boinc_dd4d23df3ed916f5, slot#2)
2025-05-16 19:49:31 (16508): Setting Memory Size for VM. (4400MB)
2025-05-16 19:49:31 (16508): Setting CPU Count for VM. (4)
2025-05-16 19:49:31 (16508): Setting Chipset Options for VM.
2025-05-16 19:49:32 (16508): Setting Graphics Controller Options for VM.
2025-05-16 19:49:32 (16508): Setting Boot Options for VM.
2025-05-16 19:49:32 (16508): Setting Network Configuration for NAT.
2025-05-16 19:49:32 (16508): Enabling VM Network Access.
2025-05-16 19:49:33 (16508): Disabling USB Support for VM.
2025-05-16 19:49:33 (16508): Disabling COM Port Support for VM.
2025-05-16 19:49:33 (16508): Disabling LPT Port Support for VM.
2025-05-16 19:49:34 (16508): Disabling Audio Support for VM.
2025-05-16 19:49:34 (16508): Disabling Clipboard Support for VM.
2025-05-16 19:49:34 (16508): Disabling Drag and Drop Support for VM.
2025-05-16 19:49:34 (16508): Adding storage controller(s) to VM.
2025-05-16 19:49:35 (16508): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-16 19:49:35 (16508): Adding VirtualBox Guest Additions to VM.
2025-05-16 19:49:35 (16508): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-16 19:49:36 (16508): forwarding host port 49425 to guest port 80
2025-05-16 19:49:36 (16508): Enabling remote desktop for VM.
2025-05-16 19:49:36 (16508): Required extension pack not installed, remote desktop not enabled.
2025-05-16 19:49:36 (16508): Enabling shared directory for VM.
2025-05-16 19:49:37 (16508): Starting VM using VBoxManage interface. (boinc_dd4d23df3ed916f5, slot#2)
2025-05-16 19:49:40 (16508): Successfully started VM. (PID = '22292')
2025-05-16 19:49:40 (16508): Reporting VM Process ID to BOINC.
2025-05-16 19:49:40 (16508): Guest Log: BIOS: VirtualBox 6.0.14
2025-05-16 19:49:40 (16508): Guest Log: CPUID EDX: 0x178bfbff
2025-05-16 19:49:40 (16508): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-16 19:49:40 (16508): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-16 19:49:40 (16508): Detected: Web Application Enabled (http://localhost:49425)
2025-05-16 19:49:40 (16508): Preference change detected
2025-05-16 19:49:40 (16508): Setting CPU throttle for VM. (90%)
2025-05-16 19:49:40 (16508): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-16 19:49:42 (16508): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-16 19:49:42 (16508): Guest Log: BIOS: Booting from Hard Disk...
2025-05-16 19:49:45 (16508): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-16 19:49:45 (16508): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-16 19:49:45 (16508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-16 19:49:45 (16508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-16 19:49:45 (16508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-16 19:49:45 (16508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-16 19:49:45 (16508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-16 19:49:45 (16508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-16 19:49:45 (16508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-16 19:49:45 (16508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-16 19:49:45 (16508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-16 19:49:45 (16508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-16 19:49:45 (16508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-16 19:49:45 (16508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-16 19:49:45 (16508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-16 19:49:45 (16508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-16 19:49:45 (16508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-16 19:49:45 (16508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-16 19:49:45 (16508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-16 19:49:45 (16508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-16 19:49:45 (16508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-16 19:49:45 (16508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-16 19:49:45 (16508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-16 19:49:45 (16508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-16 19:49:45 (16508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-16 19:49:45 (16508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-16 19:49:45 (16508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-16 19:49:45 (16508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-16 19:49:45 (16508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-16 19:49:45 (16508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-16 19:49:45 (16508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-16 19:49:45 (16508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-16 19:49:52 (16508): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-16 19:49:52 (16508): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-16 19:49:57 (16508): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-16 19:49:57 (16508): Guest Log: 00:00:00.000143 main     Log opened 2025-05-16T19:49:55.879849000Z
2025-05-16 19:49:57 (16508): Guest Log: 00:00:00.000206 main     OS Product: Linux
2025-05-16 19:49:57 (16508): Guest Log: 00:00:00.000233 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-16 19:49:57 (16508): Guest Log: 00:00:00.000255 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-16 19:49:57 (16508): Guest Log: 00:00:00.000299 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-16 19:49:57 (16508): Guest Log: 00:00:00.000300 main     Process ID: 1304
2025-05-16 19:49:57 (16508): Guest Log: 00:00:00.000300 main     Package type: LINUX_64BITS_GENERIC
2025-05-16 19:49:57 (16508): Guest Log: 00:00:00.001710 main     5.2.32 r132073 started. Verbose level = 0
2025-05-16 19:49:57 (16508): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-16 19:49:57 (16508): Guest Log: [INFO] Mounting shared directory
2025-05-16 19:49:57 (16508): Guest Log: [INFO] Checking for init_data.xml
2025-05-16 19:50:02 (16508): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-16 19:50:02 (16508): Guest Log: [INFO] Detected branch: prod
2025-05-16 19:50:02 (16508): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-16 19:50:02 (16508): Guest Log: Copying input files
2025-05-16 19:50:04 (16508): Guest Log: Copied input files into RunAtlas.
2025-05-16 19:50:04 (16508): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-16 19:50:04 (16508): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-16 19:50:04 (16508): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-16 19:50:04 (16508): Guest Log: Further information can be found at the LHC@home message board.
2025-05-16 19:50:07 (16508): Guest Log: 00:00:10.004198 timesync vgsvcTimeSyncWorker: Radical guest time change: 21 611 478 058 000ns (GuestNow=1 747 446 607 360 966 000 ns GuestLast=1 747 424 995 882 908 000 ns fSetTimeLastLoop=true )
2025-05-16 19:50:13 (16508): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-16 19:50:14 (16508): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-16 19:50:14 (16508): Guest Log: 2.6.3.0 1580 0 32200 146083 4 1 3117515 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-16 19:50:14 (16508): Guest Log: copied the webapp to /var/www
2025-05-16 19:50:14 (16508): Guest Log: ATHENA_PROC_NUMBER=4
2025-05-16 19:50:14 (16508): Guest Log: ATHENA_CORE_NUMBER=4
2025-05-16 19:50:15 (16508): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-16 19:50:15 (16508): Guest Log:  *** Starting ATLAS job. (PandaID=6652205290 taskID=44638099) ***
2025-05-16 19:55:12 (16508): Guest Log:  *** Job finished ***
2025-05-16 19:55:12 (16508): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-16 19:55:12 (16508): Guest Log: 2025-05-17 01:54:59,723 | INFO     | [data] copytool_out thread has finished
2025-05-16 19:55:12 (16508): Guest Log: 2025-05-17 01:55:00,218 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-05-16 19:55:12 (16508): Guest Log: 2025-05-17 01:55:04,224 | INFO     | [data] queue_monitor thread has finished
2025-05-16 19:55:12 (16508): Guest Log: 2025-05-17 01:55:05,274 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140543851362112)>', '<ExcThread(monitor, started 140543099119360)>']
2025-05-16 19:55:12 (16508): Guest Log: 2025-05-17 01:55:05,975 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-16 19:55:12 (16508): Guest Log: 2025-05-17 01:55:05,975 | INFO     | [monitor] control thread has ended
2025-05-16 19:55:12 (16508): Guest Log: 2025-05-17 01:55:10,279 | INFO     | all workflow threads have been joined
2025-05-16 19:55:12 (16508): Guest Log: 2025-05-17 01:55:10,280 | INFO     | end of generic workflow (traces error code: 0)
2025-05-16 19:55:12 (16508): Guest Log: 2025-05-17 01:55:10,281 | INFO     | traces error code: 0
2025-05-16 19:55:12 (16508): Guest Log: 2025-05-17 01:55:10,281 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-16 19:55:12 (16508): Guest Log: 2025-05-17 01:55:10,361 [wrapper] ==== pilot stdout END ====
2025-05-16 19:55:12 (16508): Guest Log: 2025-05-17 01:55:10,365 [wrapper] ==== wrapper stdout RESUME ====
2025-05-16 19:55:12 (16508): Guest Log: 2025-05-17 01:55:10,369 [wrapper] pilotpid: 5902
2025-05-16 19:55:12 (16508): Guest Log: 2025-05-17 01:55:10,373 [wrapper] Pilot exit status: 0
2025-05-16 19:55:12 (16508): Guest Log: 2025-05-17 01:55:10,574 [wrapper] pandaids: 6652205290
2025-05-16 19:55:12 (16508): Guest Log: 2025-05-17 01:55:10,607 [wrapper] cleanup supervisor_pilot  5908 5903
2025-05-16 19:55:12 (16508): Guest Log: 2025-05-17 01:55:10,615 [wrapper] Test setup, not cleaning
2025-05-16 19:55:12 (16508): Guest Log: 2025-05-17 01:55:10,619 [wrapper] apfmon messages muted
2025-05-16 19:55:12 (16508): Guest Log: 2025-05-17 01:55:10,623 [wrapper] ==== wrapper stdout END ====
2025-05-16 19:55:12 (16508): Guest Log: 2025-05-17 01:55:10,626 [wrapper] ==== wrapper stderr END ====
2025-05-16 19:55:12 (16508): Guest Log:  *** Error codes and diagnostics ***
2025-05-16 19:55:12 (16508): Guest Log:     "exeErrorCode": 65,
2025-05-16 19:55:12 (16508): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2025-05-16 19:55:12 (16508): Guest Log:     "pilotErrorCode": 1305,
2025-05-16 19:55:12 (16508): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2025-05-16 19:55:12 (16508): Guest Log:  *** Listing of results directory ***
2025-05-16 19:55:12 (16508): Guest Log: total 3872
2025-05-16 19:55:12 (16508): Guest Log: -rw-r--r--. 1 atlas atlas  495897 May 16 20:28 pilot3.tar.gz
2025-05-16 19:55:12 (16508): Guest Log: -rw-r--r--. 1 atlas atlas    5111 May 16 21:10 queuedata.json
2025-05-16 19:55:12 (16508): Guest Log: -rwx------. 1 atlas atlas   37140 May 16 21:11 runpilot2-wrapper.sh
2025-05-16 19:55:12 (16508): Guest Log: -rwxr-xr-x. 1 atlas atlas   11896 May 17 01:50 init_data.xml
2025-05-16 19:55:12 (16508): Guest Log: -rwxr-xr-x. 1 atlas atlas  508882 May 17 01:50 input.tar.gz
2025-05-16 19:55:12 (16508): Guest Log: -rwxr-xr-x. 1 atlas atlas   17569 May 17 01:50 start_atlas.sh
2025-05-16 19:55:12 (16508): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 May 17 01:50 EVNT.44638096._001223.pool.root.1 -> /data/./ATLAS.root_0
2025-05-16 19:55:12 (16508): Guest Log: -rw-r--r--. 1 atlas atlas    2539 May 17 01:50 pandaJob.out
2025-05-16 19:55:12 (16508): Guest Log: -rw-------. 1 atlas atlas     424 May 17 01:50 setup.sh.local
2025-05-16 19:55:12 (16508): Guest Log: -rw-------. 1 atlas atlas  994627 May 17 01:51 agis_schedconf.cvmfs.json
2025-05-16 19:55:12 (16508): Guest Log: -rw-------. 1 atlas atlas 1596741 May 17 01:51 agis_ddmendpoints.agis.ALL.json
2025-05-16 19:55:12 (16508): Guest Log: drwx------. 4 atlas atlas    4096 May 17 01:51 pilot3
2025-05-16 19:55:12 (16508): Guest Log: -rw-------. 1 atlas atlas     955 May 17 01:52 memory_monitor_summary.json
2025-05-16 19:55:12 (16508): Guest Log: -rw-------. 1 atlas atlas   20307 May 17 01:52 log.44638099._045404.job.log.tgz.1
2025-05-16 19:55:12 (16508): Guest Log: -rw-------. 1 atlas atlas      95 May 17 01:54 pilot_heartbeat.json
2025-05-16 19:55:12 (16508): Guest Log: -rw-------. 1 atlas atlas    8344 May 17 01:54 heartbeat.json
2025-05-16 19:55:12 (16508): Guest Log: -rw-------. 1 atlas atlas    4413 May 17 01:55 pilotlog.txt
2025-05-16 19:55:12 (16508): Guest Log: -rw-------. 1 atlas atlas   76165 May 17 01:55 log.44638099._045404.job.log.1
2025-05-16 19:55:12 (16508): Guest Log: -rw-------. 1 atlas atlas     188 May 17 01:55 output.list
2025-05-16 19:55:12 (16508): Guest Log: -rw-r--r--. 1 atlas atlas     620 May 17 01:55 runtime_log
2025-05-16 19:55:12 (16508): Guest Log: -rw-------. 1 atlas atlas  112640 May 17 01:55 result.tar.gz
2025-05-16 19:55:12 (16508): Guest Log: -rw-------. 1 atlas atlas     645 May 17 01:55 vQ6NDmGWHa7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmcvMKDmqqMRfn.diag
2025-05-16 19:55:12 (16508): Guest Log: -rw-r--r--. 1 atlas atlas   10797 May 17 01:55 runtime_log.err
2025-05-16 19:55:12 (16508): Guest Log: Looking for outputfile HITS.44638099._045404.pool.root.1
2025-05-16 19:55:12 (16508): Guest Log: No HITS file was produced
2025-05-16 19:55:12 (16508): Guest Log: Successfully finished the ATLAS job!
2025-05-16 19:55:12 (16508): Guest Log: Copying the results back to the shared directory!
2025-05-16 19:55:12 (16508): Guest Log:  *** Contents of shared directory: ***
2025-05-16 19:55:12 (16508): Guest Log: total 218968
2025-05-16 19:55:12 (16508): Guest Log: -rwxrwxrwx. 1 root root 223562246 May 17 01:49 ATLAS.root_0
2025-05-16 19:55:12 (16508): Guest Log: -rwxrwxrwx. 1 root root     11896 May 17 01:49 init_data.xml
2025-05-16 19:55:12 (16508): Guest Log: -rwxrwxrwx. 1 root root    508882 May 17 00:29 input.tar.gz
2025-05-16 19:55:12 (16508): Guest Log: -rwxrwxrwx. 1 root root    112640 May 17 01:55 result.tar.gz
2025-05-16 19:55:12 (16508): Guest Log: -rwxrwxrwx. 1 root root     17569 May 17 00:29 start_atlas.sh
2025-05-16 19:55:12 (16508): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-16 19:55:12 (16508): VM Completion File Detected.
2025-05-16 19:55:12 (16508): Powering off VM.
2025-05-16 19:55:13 (16508): Successfully stopped VM.
2025-05-16 19:55:13 (16508): Deregistering VM. (boinc_dd4d23df3ed916f5, slot#2)
2025-05-16 19:55:13 (16508): Removing network bandwidth throttle group from VM.
2025-05-16 19:55:13 (16508): Removing VM from VirtualBox.
19:55:19 (16508): called boinc_finish(0)

</stderr_txt>
]]>

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