Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
02:04:26 (89963): wrapper (7.7.26015): starting
02:04:26 (89963): wrapper: running run_atlas (--nthreads 3)
[2025-05-17 02:04:26] Arguments: --nthreads 3
[2025-05-17 02:04:26] Threads: 3
[2025-05-17 02:04:26] Checking for CVMFS
[2025-05-17 02:04:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 02:04:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 02:04:26] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 02:04:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 02:04:26] 2.9.2.0 7515 324 56976 146081 0 56 1921734 36864001 0 130560 0 210245 97.029 796698 4540 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-05-17 02:04:26] CVMFS is ok
[2025-05-17 02:04:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-17 02:04:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-17 02:04:26] Further information can be found at the LHC@home message board.
[2025-05-17 02:04:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 02:04:26] Checking for apptainer binary...
[2025-05-17 02:04:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 02:04:26] Running /usr/bin/apptainer --version
[2025-05-17 02:04:26] apptainer version 1.3.6-6.1
[2025-05-17 02:04:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 02:04:26] pclinst
[2025-05-17 02:04:26] apptainer works
[2025-05-17 02:04:26] Set ATHENA_PROC_NUMBER=3
[2025-05-17 02:04:26] Set ATHENA_CORE_NUMBER=3
[2025-05-17 02:04:26] Starting ATLAS job with PandaID=6651814705
[2025-05-17 02:04:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 03:51:11]  *** The last 200 lines of the pilot log: ***
[2025-05-17 03:51:11] 2025-05-17 01:50:58,089 | INFO     | mean x: 1747443310.5
[2025-05-17 03:51:11] 2025-05-17 01:50:58,089 | INFO     | mean y: 2265253.13
[2025-05-17 03:51:11] 2025-05-17 01:50:58,089 | INFO     | -- intersect: -146478298193.75076
[2025-05-17 03:51:11] 2025-05-17 01:50:58,089 | INFO     | intersect: -146478298193.75076
[2025-05-17 03:51:11] 2025-05-17 01:50:58,089 | INFO     | chi2: 2.7331602442451786
[2025-05-17 03:51:11] 2025-05-17 01:50:58,089 | INFO     | current chi2=2.7331602442451786 (change=-0.03260593474408995 %)
[2025-05-17 03:51:11] 2025-05-17 01:50:58,089 | INFO     | right removable region: 99
[2025-05-17 03:51:11] 2025-05-17 01:50:58,090 | INFO     | sum of square deviations: 310052325.0
[2025-05-17 03:51:11] 2025-05-17 01:50:58,090 | INFO     | sum of deviations: 8209814899.499998
[2025-05-17 03:51:11] 2025-05-17 01:50:58,090 | INFO     | mean x: 1747443615.5
[2025-05-17 03:51:11] 2025-05-17 01:50:58,090 | INFO     | mean y: 2331343.39
[2025-05-17 03:51:11] 2025-05-17 01:50:58,090 | INFO     | -- intersect: -46267886532.15099
[2025-05-17 03:51:11] 2025-05-17 01:50:58,090 | INFO     | intersect: -46267886532.15099
[2025-05-17 03:51:11] 2025-05-17 01:50:58,090 | INFO     | chi2: 0.8782805543047282
[2025-05-17 03:51:11] 2025-05-17 01:50:58,090 | INFO     | current chi2=0.8782805543047282 (change=67.8552720156454 %)
[2025-05-17 03:51:11] 2025-05-17 01:50:58,090 | INFO     | sum of square deviations: 265828240.0
[2025-05-17 03:51:11] 2025-05-17 01:50:58,090 | INFO     | sum of deviations: -5281792360.0
[2025-05-17 03:51:11] 2025-05-17 01:50:58,090 | INFO     | mean x: 1747443768.0
[2025-05-17 03:51:11] 2025-05-17 01:50:58,090 | INFO     | mean y: 2377890.147368421
[2025-05-17 03:51:11] 2025-05-17 01:50:58,090 | INFO     | -- intersect: 34722673759.9617
[2025-05-17 03:51:11] 2025-05-17 01:50:58,090 | INFO     | intersect: 34722673759.9617
[2025-05-17 03:51:11] 2025-05-17 01:50:58,090 | INFO     | chi2: 0.08199240315572535
[2025-05-17 03:51:11] 2025-05-17 01:50:58,090 | INFO     | current chi2=0.08199240315572535 (change=90.66444056470853 %)
[2025-05-17 03:51:11] 2025-05-17 01:50:58,090 | INFO     | sum of square deviations: 226022842.5
[2025-05-17 03:51:11] 2025-05-17 01:50:58,091 | INFO     | sum of deviations: -1653826632.0
[2025-05-17 03:51:11] 2025-05-17 01:50:58,091 | INFO     | mean x: 1747443920.5
[2025-05-17 03:51:11] 2025-05-17 01:50:58,091 | INFO     | mean y: 2364013.177777778
[2025-05-17 03:51:11] 2025-05-17 01:50:58,091 | INFO     | -- intersect: 12788546425.910645
[2025-05-17 03:51:11] 2025-05-17 01:50:58,091 | INFO     | intersect: 12788546425.910645
[2025-05-17 03:51:11] 2025-05-17 01:50:58,091 | INFO     | chi2: 0.04034930506359983
[2025-05-17 03:51:11] 2025-05-17 01:50:58,091 | INFO     | current chi2=0.04034930506359983 (change=50.78897128192988 %)
[2025-05-17 03:51:11] 2025-05-17 01:50:58,091 | INFO     | sum of square deviations: 190403570.0
[2025-05-17 03:51:11] 2025-05-17 01:50:58,091 | INFO     | sum of deviations: 1067465352.0
[2025-05-17 03:51:11] 2025-05-17 01:50:58,091 | INFO     | mean x: 1747444073.0
[2025-05-17 03:51:11] 2025-05-17 01:50:58,091 | INFO     | mean y: 2352346.3647058825
[2025-05-17 03:51:11] 2025-05-17 01:50:58,091 | INFO     | -- intersect: -9794396750.751795
[2025-05-17 03:51:11] 2025-05-17 01:50:58,091 | INFO     | intersect: -9794396750.751795
[2025-05-17 03:51:11] 2025-05-17 01:50:58,091 | INFO     | chi2: 0.004688990000398523
[2025-05-17 03:51:11] 2025-05-17 01:50:58,091 | INFO     | current chi2=0.004688990000398523 (change=88.37900679328283 %)
[2025-05-17 03:51:11] 2025-05-17 01:50:58,091 | INFO     | sum of square deviations: 158737860.0
[2025-05-17 03:51:11] 2025-05-17 01:50:58,091 | INFO     | sum of deviations: 637427277.5
[2025-05-17 03:51:11] 2025-05-17 01:50:58,091 | INFO     | mean x: 1747444225.5
[2025-05-17 03:51:11] 2025-05-17 01:50:58,091 | INFO     | mean y: 2354410.7125
[2025-05-17 03:51:11] 2025-05-17 01:50:58,091 | INFO     | -- intersect: -7014677412.971913
[2025-05-17 03:51:11] 2025-05-17 01:50:58,091 | INFO     | intersect: -7014677412.971913
[2025-05-17 03:51:11] 2025-05-17 01:50:58,092 | INFO     | chi2: 0.004241644733637164
[2025-05-17 03:51:11] 2025-05-17 01:50:58,092 | INFO     | current chi2=0.004241644733637164 (change=9.540333136204989 %)
[2025-05-17 03:51:11] 2025-05-17 01:50:58,092 | INFO     | left removable region: 50
[2025-05-17 03:51:11] 2025-05-17 01:50:58,092 | INFO     | sum of square deviations: 36465800.0
[2025-05-17 03:51:11] 2025-05-17 01:50:58,092 | INFO     | sum of deviations: -251347206.0
[2025-05-17 03:51:11] 2025-05-17 01:50:58,092 | INFO     | mean x: 1747444805.0
[2025-05-17 03:51:11] 2025-05-17 01:50:58,092 | INFO     | mean y: 2356252.2448979593
[2025-05-17 03:51:11] 2025-05-17 01:50:58,092 | INFO     | -- intersect: 12046939653.019453
[2025-05-17 03:51:11] 2025-05-17 01:50:58,092 | INFO     | intersect: 12046939653.019453
[2025-05-17 03:51:11] 2025-05-17 01:50:58,092 | INFO     | chi2: 0.0007210632683409376
[2025-05-17 03:51:11] 2025-05-17 01:50:58,092 | INFO     | -- intersect: 12046939653.019453
[2025-05-17 03:51:11] 2025-05-17 01:50:58,092 | INFO     | current memory leak: -6.89 B/s (using 49 data points, chi2=0.00)
[2025-05-17 03:51:11] 2025-05-17 01:50:58,092 | INFO     | ..............................
[2025-05-17 03:51:11] 2025-05-17 01:50:58,092 | INFO     | . Timing measurements:
[2025-05-17 03:51:11] 2025-05-17 01:50:58,092 | INFO     | . get job = 0 s
[2025-05-17 03:51:11] 2025-05-17 01:50:58,092 | INFO     | . initial setup = 1 s
[2025-05-17 03:51:11] 2025-05-17 01:50:58,092 | INFO     | . payload setup = 2 s
[2025-05-17 03:51:11] 2025-05-17 01:50:58,092 | INFO     | . stage-in = 0 s
[2025-05-17 03:51:11] 2025-05-17 01:50:58,092 | INFO     | . payload execution = 6361 s
[2025-05-17 03:51:11] 2025-05-17 01:50:58,092 | INFO     | . stage-out = 0 s
[2025-05-17 03:51:11] 2025-05-17 01:50:58,092 | INFO     | . log creation = 0 s
[2025-05-17 03:51:11] 2025-05-17 01:50:58,092 | INFO     | ..............................
[2025-05-17 03:51:11] 2025-05-17 01:50:58,123 | INFO     | 
[2025-05-17 03:51:11] 2025-05-17 01:50:58,123 | INFO     | job summary report
[2025-05-17 03:51:11] 2025-05-17 01:50:58,123 | INFO     | --------------------------------------------------
[2025-05-17 03:51:11] 2025-05-17 01:50:58,123 | INFO     | PanDA job id: 6651814705
[2025-05-17 03:51:11] 2025-05-17 01:50:58,123 | INFO     | task id: 44638099
[2025-05-17 03:51:11] 2025-05-17 01:50:58,123 | INFO     | errors: (none)
[2025-05-17 03:51:11] 2025-05-17 01:50:58,123 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 03:51:11] 2025-05-17 01:50:58,123 | INFO     | pilot state: finished 
[2025-05-17 03:51:11] 2025-05-17 01:50:58,123 | INFO     | transexitcode: 0
[2025-05-17 03:51:11] 2025-05-17 01:50:58,123 | INFO     | exeerrorcode: 0
[2025-05-17 03:51:11] 2025-05-17 01:50:58,123 | INFO     | exeerrordiag: 
[2025-05-17 03:51:11] 2025-05-17 01:50:58,123 | INFO     | exitcode: 0
[2025-05-17 03:51:11] 2025-05-17 01:50:58,123 | INFO     | exitmsg: OK
[2025-05-17 03:51:11] 2025-05-17 01:50:58,124 | INFO     | cpuconsumptiontime: 17142 s
[2025-05-17 03:51:11] 2025-05-17 01:50:58,124 | INFO     | nevents: 400
[2025-05-17 03:51:11] 2025-05-17 01:50:58,124 | INFO     | neventsw: 0
[2025-05-17 03:51:11] 2025-05-17 01:50:58,124 | INFO     | pid: 100038
[2025-05-17 03:51:11] 2025-05-17 01:50:58,124 | INFO     | pgrp: 100038
[2025-05-17 03:51:11] 2025-05-17 01:50:58,124 | INFO     | corecount: 3
[2025-05-17 03:51:11] 2025-05-17 01:50:58,124 | INFO     | event service: False
[2025-05-17 03:51:11] 2025-05-17 01:50:58,124 | INFO     | sizes: {0: 2392877, 1: 2393736, 3: 2393942, 11: 2393970, 6367: 2421033, 6368: 2430163, 6370: 2430163, 6374: 2430333}
[2025-05-17 03:51:11] 2025-05-17 01:50:58,124 | INFO     | --------------------------------------------------
[2025-05-17 03:51:11] 2025-05-17 01:50:58,124 | INFO     | 
[2025-05-17 03:51:11] 2025-05-17 01:50:58,124 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-05-17 03:51:11] 2025-05-17 01:50:58,136 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 03:51:11] 2025-05-17 01:50:58,136 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 03:51:11] 2025-05-17 01:50:58,136 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 03:51:11] 2025-05-17 01:50:58,136 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 03:51:11] 2025-05-17 01:50:58,136 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 03:51:11] 2025-05-17 01:50:58,136 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 03:51:11] 2025-05-17 01:50:58,136 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 03:51:11] 2025-05-17 01:50:58,137 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 03:51:11] 2025-05-17 01:50:58,137 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 03:51:11] 2025-05-17 01:50:58,137 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 03:51:11] 2025-05-17 01:50:58,137 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 03:51:11] 2025-05-17 01:50:58,137 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 03:51:11] 2025-05-17 01:50:58,137 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 03:51:11] 2025-05-17 01:50:58,137 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 03:51:11] 2025-05-17 01:50:58,137 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 03:51:11] 2025-05-17 01:50:58,137 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 03:51:11] 2025-05-17 01:50:58,137 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 03:51:11] 2025-05-17 01:50:58,137 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 03:51:11] 2025-05-17 01:50:58,137 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 03:51:11] 2025-05-17 01:50:58,137 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 03:51:11] 2025-05-17 01:50:58,137 | INFO     | job 6651814705 has completed (purged errors)
[2025-05-17 03:51:11] 2025-05-17 01:50:58,137 | INFO     | overall cleanup function is called
[2025-05-17 03:51:11] 2025-05-17 01:50:59,143 | INFO     | --- collectZombieJob: --- 10, [100038]
[2025-05-17 03:51:11] 2025-05-17 01:50:59,144 | INFO     | zombie collector waiting for pid 100038
[2025-05-17 03:51:11] 2025-05-17 01:50:59,144 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 03:51:11] 2025-05-17 01:50:59,144 | INFO     | collected zombie processes
[2025-05-17 03:51:11] 2025-05-17 01:50:59,144 | INFO     | will attempt to kill all subprocesses of pid=100038
[2025-05-17 03:51:11] 2025-05-17 01:50:59,185 | INFO     | process IDs to be killed: [100038] (in reverse order)
[2025-05-17 03:51:11] 2025-05-17 01:50:59,208 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 03:51:11] 2025-05-17 01:50:59,208 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 03:51:11] 2025-05-17 01:50:59,209 | INFO     | did not find any defunct processes belonging to 100038
[2025-05-17 03:51:11] 2025-05-17 01:50:59,210 | INFO     | did not find any defunct processes belonging to 100038
[2025-05-17 03:51:11] 2025-05-17 01:50:59,210 | INFO     | ready for new job
[2025-05-17 03:51:11] 2025-05-17 01:50:59,210 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 03:51:11] 2025-05-17 01:50:59,211 | INFO     | **************************************
[2025-05-17 03:51:11] 2025-05-17 01:50:59,211 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 03:51:11] 2025-05-17 01:50:59,211 | INFO     | **************************************
[2025-05-17 03:51:11] 2025-05-17 01:50:59,211 | INFO     | 
[2025-05-17 03:51:11] 2025-05-17 01:50:59,211 | INFO     | architecture information:
[2025-05-17 03:51:11] 2025-05-17 01:50:59,211 | INFO     | executing command: cat /etc/os-release
[2025-05-17 03:51:11] 2025-05-17 01:50:59,219 | INFO     | cat /etc/os-release:
[2025-05-17 03:51:11] NAME="CentOS Linux"
[2025-05-17 03:51:11] VERSION="7 (Core)"
[2025-05-17 03:51:11] ID="centos"
[2025-05-17 03:51:11] ID_LIKE="rhel fedora"
[2025-05-17 03:51:11] VERSION_ID="7"
[2025-05-17 03:51:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 03:51:11] ANSI_COLOR="0;31"
[2025-05-17 03:51:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 03:51:11] HOME_URL="https://www.centos.org/"
[2025-05-17 03:51:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 03:51:11] 
[2025-05-17 03:51:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 03:51:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 03:51:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 03:51:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 03:51:11] 
[2025-05-17 03:51:11] 2025-05-17 01:50:59,220 | INFO     | **************************************
[2025-05-17 03:51:11] 2025-05-17 01:50:59,723 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-05-17 03:51:11] 2025-05-17 01:50:59,736 | INFO     | sufficient remaining disk space (360369356800 B)
[2025-05-17 03:51:11] 2025-05-17 01:50:59,736 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 03:51:11] 2025-05-17 01:50:59,736 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 03:51:11] 2025-05-17 01:50:59,736 | INFO     | update_server=False
[2025-05-17 03:51:11] 2025-05-17 01:50:59,736 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 03:51:11] 2025-05-17 01:50:59,736 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 03:51:11] 2025-05-17 01:50:59,857 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 03:51:11] 2025-05-17 01:50:59,857 | INFO     | aborting loop
[2025-05-17 03:51:11] 2025-05-17 01:51:00,583 | INFO     | all job control threads have been joined
[2025-05-17 03:51:11] 2025-05-17 01:51:00,708 | INFO     | PID=93612 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-05-17 03:51:11] 2025-05-17 01:51:00,708 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 03:51:11] 2025-05-17 01:51:00,708 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 03:51:11] 2025-05-17 01:51:00,708 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 03:51:11] 2025-05-17 01:51:00,722 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 03:51:11] 2025-05-17 01:51:00,742 | INFO     | [job] retrieve thread has finished
[2025-05-17 03:51:11] 2025-05-17 01:51:00,742 | INFO     | [job] queue monitor thread has finished
[2025-05-17 03:51:11] 2025-05-17 01:51:00,772 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 03:51:11] 2025-05-17 01:51:00,795 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 03:51:11] 2025-05-17 01:51:00,798 | INFO     | all data control threads have been joined
[2025-05-17 03:51:11] 2025-05-17 01:51:00,798 | INFO     | all payload control threads have been joined
[2025-05-17 03:51:11] 2025-05-17 01:51:00,813 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 03:51:11] 2025-05-17 01:51:00,863 | INFO     | [job] job monitor thread has finished
[2025-05-17 03:51:11] 2025-05-17 01:51:00,975 | INFO     | [payload] failed_post thread has finished
[2025-05-17 03:51:11] 2025-05-17 01:51:01,009 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 03:51:11] 2025-05-17 01:51:01,513 | INFO     | [payload] validate_post thread has finished
[2025-05-17 03:51:11] 2025-05-17 01:51:01,574 | INFO     | [data] copytool_in thread has finished
[2025-05-17 03:51:11] 2025-05-17 01:51:01,589 | INFO     | [job] control thread has finished
[2025-05-17 03:51:11] 2025-05-17 01:51:01,803 | INFO     | [data] control thread has finished
[2025-05-17 03:51:11] 2025-05-17 01:51:01,804 | INFO     | [payload] control thread has finished
[2025-05-17 03:51:11] 2025-05-17 01:51:01,995 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 03:51:11] 2025-05-17 01:51:02,172 | INFO     | [job] validate thread has finished
[2025-05-17 03:51:11] 2025-05-17 01:51:02,819 | INFO     | [data] copytool_out thread has finished
[2025-05-17 03:51:11] 2025-05-17 01:51:04,729 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 03:51:11] 2025-05-17 01:51:06,700 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140620524668736)>', '<ExcThread(monitor, started 140619905230592)>']
[2025-05-17 03:51:11] 2025-05-17 01:51:06,740 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 03:51:11] 2025-05-17 01:51:06,741 | INFO     | [monitor] control thread has ended
[2025-05-17 03:51:11] 2025-05-17 01:51:11,725 | INFO     | all workflow threads have been joined
[2025-05-17 03:51:11] 2025-05-17 01:51:11,726 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 03:51:11] 2025-05-17 01:51:11,726 | INFO     | traces error code: 0
[2025-05-17 03:51:11] 2025-05-17 01:51:11,726 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 03:51:11] 2025-05-17 01:51:11,776 [wrapper] ==== pilot stdout END ====
[2025-05-17 03:51:11] 2025-05-17 01:51:11,779 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 03:51:11] 2025-05-17 01:51:11,781 [wrapper] pilotpid: 93612
[2025-05-17 03:51:11] 2025-05-17 01:51:11,783 [wrapper] Pilot exit status: 0
[2025-05-17 03:51:11] 2025-05-17 01:51:11,790 [wrapper] pandaids: 6651814705
[2025-05-17 03:51:11] 2025-05-17 01:51:11,806 [wrapper] cleanup supervisor_pilot  115482 93613
[2025-05-17 03:51:11] 2025-05-17 01:51:11,808 [wrapper] Test setup, not cleaning
[2025-05-17 03:51:11] 2025-05-17 01:51:11,811 [wrapper] apfmon messages muted
[2025-05-17 03:51:11] 2025-05-17 01:51:11,813 [wrapper] ==== wrapper stdout END ====
[2025-05-17 03:51:11] 2025-05-17 01:51:11,815 [wrapper] ==== wrapper stderr END ====
[2025-05-17 03:51:11]  *** Error codes and diagnostics ***
[2025-05-17 03:51:11]     "exeErrorCode": 0,
[2025-05-17 03:51:11]     "exeErrorDiag": "",
[2025-05-17 03:51:11]     "pilotErrorCode": 0,
[2025-05-17 03:51:11]     "pilotErrorDiag": "",
[2025-05-17 03:51:11]  *** Listing of results directory ***
[2025-05-17 03:51:11] total 409528
[2025-05-17 03:51:11] -rw-r--r-- 1 boinc boinc    495897 May 16 17:18 pilot3.tar.gz
[2025-05-17 03:51:11] -rwx------ 1 boinc boinc     37140 May 16 17:57 runpilot2-wrapper.sh
[2025-05-17 03:51:11] -rw-r--r-- 1 boinc boinc      5111 May 16 17:57 queuedata.json
[2025-05-17 03:51:11] -rw-r--r-- 1 boinc boinc       100 May 17 02:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 03:51:11] -rwxr-xr-x 1 boinc boinc      7986 May 17 02:04 run_atlas
[2025-05-17 03:51:11] -rw-r--r-- 1 boinc boinc       105 May 17 02:04 job.xml
[2025-05-17 03:51:11] -rw-r--r-- 2 boinc boinc 222292744 May 17 02:04 EVNT.44638096._000982.pool.root.1
[2025-05-17 03:51:11] -rw-r--r-- 1 boinc boinc      6913 May 17 02:04 init_data.xml
[2025-05-17 03:51:11] drwxrwx--x 2 boinc boinc      4096 May 17 02:04 shared
[2025-05-17 03:51:11] -rw-r--r-- 2 boinc boinc    508879 May 17 02:04 input.tar.gz
[2025-05-17 03:51:11] -rw-r--r-- 2 boinc boinc     17569 May 17 02:04 start_atlas.sh
[2025-05-17 03:51:11] -rw-r--r-- 1 boinc boinc         0 May 17 02:04 boinc_lockfile
[2025-05-17 03:51:11] -rw-r--r-- 1 boinc boinc      2536 May 17 02:04 pandaJob.out
[2025-05-17 03:51:11] -rw------- 1 boinc boinc       424 May 17 02:04 setup.sh.local
[2025-05-17 03:51:11] -rw------- 1 boinc boinc    994643 May 17 02:04 agis_schedconf.cvmfs.json
[2025-05-17 03:51:11] -rw------- 1 boinc boinc   1596741 May 17 02:04 agis_ddmendpoints.agis.ALL.json
[2025-05-17 03:51:11] drwx------ 4 boinc boinc      4096 May 17 02:04 pilot3
[2025-05-17 03:51:11] -rw------- 1 boinc boinc        95 May 17 03:50 pilot_heartbeat.json
[2025-05-17 03:51:11] -rw-r--r-- 1 boinc boinc       529 May 17 03:50 boinc_task_state.xml
[2025-05-17 03:51:11] -rw------- 1 boinc boinc 191542079 May 17 03:50 HITS.44638099._042176.pool.root.1
[2025-05-17 03:51:11] -rw------- 1 boinc boinc      1017 May 17 03:50 memory_monitor_summary.json
[2025-05-17 03:51:11] -rw------- 1 boinc boinc    226508 May 17 03:50 log.44638099._042176.job.log.tgz.1
[2025-05-17 03:51:11] -rw------- 1 boinc boinc      7647 May 17 03:50 heartbeat.json
[2025-05-17 03:51:11] -rw-r--r-- 1 boinc boinc      8192 May 17 03:51 boinc_mmap_file
[2025-05-17 03:51:11] -rw-r--r-- 1 boinc boinc        27 May 17 03:51 wrapper_checkpoint.txt
[2025-05-17 03:51:11] -rw------- 1 boinc boinc      4674 May 17 03:51 pilotlog.txt
[2025-05-17 03:51:11] -rw------- 1 boinc boinc    609913 May 17 03:51 log.44638099._042176.job.log.1
[2025-05-17 03:51:11] -rw------- 1 boinc boinc       357 May 17 03:51 output.list
[2025-05-17 03:51:11] -rw-r--r-- 1 boinc boinc       620 May 17 03:51 runtime_log
[2025-05-17 03:51:11] -rw------- 1 boinc boinc    860160 May 17 03:51 result.tar.gz
[2025-05-17 03:51:11] -rw-r--r-- 1 boinc boinc     11104 May 17 03:51 runtime_log.err
[2025-05-17 03:51:11] -rw------- 1 boinc boinc       660 May 17 03:51 dXWLDm2bCa7n9Rq4apOajLDm4fhM0noT9bVof3QYDmpEJKDmTAc2Ho.diag
[2025-05-17 03:51:11] -rw-r--r-- 1 boinc boinc     20784 May 17 03:51 stderr.txt
[2025-05-17 03:51:11] HITS file was successfully produced:
[2025-05-17 03:51:11] -rw------- 1 boinc boinc 191542079 May 17 03:50 shared/HITS.pool.root.1
[2025-05-17 03:51:11]  *** Contents of shared directory: ***
[2025-05-17 03:51:11] total 405508
[2025-05-17 03:51:11] -rw-r--r-- 2 boinc boinc 222292744 May 17 02:04 ATLAS.root_0
[2025-05-17 03:51:11] -rw-r--r-- 2 boinc boinc    508879 May 17 02:04 input.tar.gz
[2025-05-17 03:51:11] -rw-r--r-- 2 boinc boinc     17569 May 17 02:04 start_atlas.sh
[2025-05-17 03:51:11] -rw------- 1 boinc boinc 191542079 May 17 03:50 HITS.pool.root.1
[2025-05-17 03:51:11] -rw------- 1 boinc boinc    860160 May 17 03:51 result.tar.gz
03:51:13 (89963): run_atlas exited; CPU time 17165.693193
03:51:13 (89963): called boinc_finish(0)

</stderr_txt>
]]>

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