Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:45:41 (3668): wrapper (7.7.26015): starting
19:45:41 (3668): wrapper: running run_atlas (--nthreads 12)
[2025-05-16 19:45:41] Arguments: --nthreads 12
[2025-05-16 19:45:41] Threads: 12
[2025-05-16 19:45:41] Checking for CVMFS
[2025-05-16 19:45:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-16 19:45:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-16 19:45:41] Running cvmfs_config stat atlas.cern.ch
[2025-05-16 19:45:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-16 19:45:41] 2.11.2.0 2987 8953 83872 146081 0 56 18311735 20275200 1 130560 0 3418870 99.985 1702817 53896 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-05-16 19:45:41] CVMFS is ok
[2025-05-16 19:45:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-16 19:45:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-16 19:45:41] Further information can be found at the LHC@home message board.
[2025-05-16 19:45:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-16 19:45:41] Checking for apptainer binary...
[2025-05-16 19:45:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-16 19:45:41] Running /usr/bin/apptainer --version
[2025-05-16 19:45:41] apptainer version 1.3.2-1.el7
[2025-05-16 19:45:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-16 19:45:43] c-205-19.aglt2.org
[2025-05-16 19:45:43] apptainer works
[2025-05-16 19:45:43] Set ATHENA_PROC_NUMBER=12
[2025-05-16 19:45:43] Set ATHENA_CORE_NUMBER=12
[2025-05-16 19:45:43] Starting ATLAS job with PandaID=6652057998
[2025-05-16 19:45:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-16 21:21:46]  *** The last 200 lines of the pilot log: ***
[2025-05-16 21:21:46]  filetype=log
[2025-05-16 21:21:46]  guid=a9ac7768-3a88-4423-9afd-0d28b45afc85
[2025-05-16 21:21:46]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-16 21:21:46]  is_altstaged=None
[2025-05-16 21:21:46]  is_tar=False
[2025-05-16 21:21:46]  lfn=log.44638099._044897.job.log.tgz.1
[2025-05-16 21:21:46]  mtime=0
[2025-05-16 21:21:46]  protocol_id=None
[2025-05-16 21:21:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-16 21:21:46]  replicas=None
[2025-05-16 21:21:46]  scope=mc23_13p6TeV
[2025-05-16 21:21:46]  status=None
[2025-05-16 21:21:46]  status_code=0
[2025-05-16 21:21:46]  storage_token=
[2025-05-16 21:21:46]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6652057998/log.44638099._044897.job.log.tgz.1
[2025-05-16 21:21:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/c3/log.44638099._044897.job.log.tgz.1
[2025-05-16 21:21:46]  workdir=None
[2025-05-16 21:21:46] ]
[2025-05-16 21:21:46] 2025-05-17 01:21:21,384 | INFO     | transferring file log.44638099._044897.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6652057998/log.44638099._044897.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-05-16 21:21:46] 2025-05-17 01:21:21,384 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6652057998/log.44638099._044897.job.log.tgz.1 /tmp/boinchome/slots/0/log.44638099._044897.job
[2025-05-16 21:21:46] 2025-05-17 01:21:21,407 | INFO     | adding to output.list: log.44638099._044897.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/c3/log.44638099._044897.job.log.tg
[2025-05-16 21:21:46] 2025-05-17 01:21:21,408 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-16 21:21:46] 2025-05-17 01:21:21,408 | INFO     | summary of transferred files:
[2025-05-16 21:21:46] 2025-05-17 01:21:21,408 | INFO     |  -- lfn=log.44638099._044897.job.log.tgz.1, status_code=0, status=transferred
[2025-05-16 21:21:46] 2025-05-17 01:21:21,408 | INFO     | stage-out finished correctly
[2025-05-16 21:21:46] 2025-05-17 01:21:21,494 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-16 21:21:46] 2025-05-17 01:21:21,676 | INFO     | job 6652057998 has state=finished
[2025-05-16 21:21:46] 2025-05-17 01:21:21,676 | INFO     | preparing for final server update for job 6652057998 in state='finished'
[2025-05-16 21:21:46] 2025-05-17 01:21:21,677 | INFO     | this job has now completed (state=finished)
[2025-05-16 21:21:46] 2025-05-17 01:21:21,677 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-16 21:21:46] 2025-05-17 01:21:21,677 | INFO     | log transfer has been attempted: DONE
[2025-05-16 21:21:46] 2025-05-17 01:21:21,677 | INFO     | job 6652057998 has finished - writing final server update
[2025-05-16 21:21:46] 2025-05-17 01:21:21,678 | INFO     | total number of processed events: 400 (read)
[2025-05-16 21:21:46] 2025-05-17 01:21:21,679 | INFO     | executing command: lscpu
[2025-05-16 21:21:46] 2025-05-17 01:21:21,709 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-16 21:21:46] 2025-05-17 01:21:22,445 | INFO     | PID=7277 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-05-16 21:21:46] 2025-05-17 01:21:23,201 | INFO     | monitor loop #427: job 0:6652057998 is in state 'finished'
[2025-05-16 21:21:46] 2025-05-17 01:21:23,201 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-16 21:21:46] 2025-05-17 01:21:25,704 | INFO     | monitor loop #428: job 0:6652057998 is in state 'finished'
[2025-05-16 21:21:46] 2025-05-17 01:21:25,704 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-16 21:21:46] 2025-05-17 01:21:26,426 | INFO     | CPU arch script returned: x86-64-v2
[2025-05-16 21:21:46] 2025-05-17 01:21:26,426 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6652057998/memory_monitor_summary.json (trf name=prmon)
[2025-05-16 21:21:46] 2025-05-17 01:21:26,427 | INFO     | extracted standard info from prmon json
[2025-05-16 21:21:46] 2025-05-17 01:21:26,428 | INFO     | extracted standard memory fields from prmon json
[2025-05-16 21:21:46] 2025-05-17 01:21:26,428 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-16 21:21:46] 2025-05-17 01:21:26,428 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-16 21:21:46] 2025-05-17 01:21:26,428 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-16 21:21:46] 2025-05-17 01:21:26,431 | INFO     | fitting pss+swap vs Time
[2025-05-16 21:21:46] 2025-05-17 01:21:26,432 | INFO     | sum of square deviations: 204163828.0
[2025-05-16 21:21:46] 2025-05-17 01:21:26,432 | INFO     | sum of deviations: 23052743203.0
[2025-05-16 21:21:46] 2025-05-17 01:21:26,433 | INFO     | mean x: 1747442114.0
[2025-05-16 21:21:46] 2025-05-17 01:21:26,433 | INFO     | mean y: 2616123.206896552
[2025-05-16 21:21:46] 2025-05-17 01:21:26,433 | INFO     | -- intersect: -197306254457.67508
[2025-05-16 21:21:46] 2025-05-17 01:21:26,433 | INFO     | intersect: -197306254457.67508
[2025-05-16 21:21:46] 2025-05-17 01:21:26,433 | INFO     | chi2: 2.175883766848836
[2025-05-16 21:21:46] 2025-05-17 01:21:26,434 | INFO     | -- intersect: -197306254457.67508
[2025-05-16 21:21:46] 2025-05-17 01:21:26,434 | INFO     | current memory leak: 112.91 B/s (using 87 data points, chi2=2.18)
[2025-05-16 21:21:46] 2025-05-17 01:21:26,434 | INFO     | ..............................
[2025-05-16 21:21:46] 2025-05-17 01:21:26,435 | INFO     | . Timing measurements:
[2025-05-16 21:21:46] 2025-05-17 01:21:26,435 | INFO     | . get job = 0 s
[2025-05-16 21:21:46] 2025-05-17 01:21:26,435 | INFO     | . initial setup = 3 s
[2025-05-16 21:21:46] 2025-05-17 01:21:26,435 | INFO     | . payload setup = 7 s
[2025-05-16 21:21:46] 2025-05-17 01:21:26,435 | INFO     | . stage-in = 0 s
[2025-05-16 21:21:46] 2025-05-17 01:21:26,435 | INFO     | . payload execution = 5696 s
[2025-05-16 21:21:46] 2025-05-17 01:21:26,435 | INFO     | . stage-out = 0 s
[2025-05-16 21:21:46] 2025-05-17 01:21:26,436 | INFO     | . log creation = 0 s
[2025-05-16 21:21:46] 2025-05-17 01:21:26,436 | INFO     | ..............................
[2025-05-16 21:21:46] 2025-05-17 01:21:26,520 | INFO     | 
[2025-05-16 21:21:46] 2025-05-17 01:21:26,520 | INFO     | job summary report
[2025-05-16 21:21:46] 2025-05-17 01:21:26,520 | INFO     | --------------------------------------------------
[2025-05-16 21:21:46] 2025-05-17 01:21:26,520 | INFO     | PanDA job id: 6652057998
[2025-05-16 21:21:46] 2025-05-17 01:21:26,521 | INFO     | task id: 44638099
[2025-05-16 21:21:46] 2025-05-17 01:21:26,521 | INFO     | errors: (none)
[2025-05-16 21:21:46] 2025-05-17 01:21:26,521 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-16 21:21:46] 2025-05-17 01:21:26,521 | INFO     | pilot state: finished 
[2025-05-16 21:21:46] 2025-05-17 01:21:26,521 | INFO     | transexitcode: 0
[2025-05-16 21:21:46] 2025-05-17 01:21:26,521 | INFO     | exeerrorcode: 0
[2025-05-16 21:21:46] 2025-05-17 01:21:26,522 | INFO     | exeerrordiag: 
[2025-05-16 21:21:46] 2025-05-17 01:21:26,522 | INFO     | exitcode: 0
[2025-05-16 21:21:46] 2025-05-17 01:21:26,522 | INFO     | exitmsg: OK
[2025-05-16 21:21:46] 2025-05-17 01:21:26,522 | INFO     | cpuconsumptiontime: 55903 s
[2025-05-16 21:21:46] 2025-05-17 01:21:26,522 | INFO     | nevents: 400
[2025-05-16 21:21:46] 2025-05-17 01:21:26,522 | INFO     | neventsw: 0
[2025-05-16 21:21:46] 2025-05-17 01:21:26,522 | INFO     | pid: 13666
[2025-05-16 21:21:46] 2025-05-17 01:21:26,523 | INFO     | pgrp: 13666
[2025-05-16 21:21:46] 2025-05-17 01:21:26,523 | INFO     | corecount: 12
[2025-05-16 21:21:46] 2025-05-17 01:21:26,523 | INFO     | event service: False
[2025-05-16 21:21:46] 2025-05-17 01:21:26,523 | INFO     | sizes: {0: 2393596, 1: 2393738, 5: 2393944, 11: 2394000, 5707: 2420466, 5708: 2420465, 5709: 2429646, 5714: 2429760}
[2025-05-16 21:21:46] 2025-05-17 01:21:26,523 | INFO     | --------------------------------------------------
[2025-05-16 21:21:46] 2025-05-17 01:21:26,523 | INFO     | 
[2025-05-16 21:21:46] 2025-05-17 01:21:26,524 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-16 21:21:46] 2025-05-17 01:21:26,548 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-16 21:21:46] 2025-05-17 01:21:26,549 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-16 21:21:46] 2025-05-17 01:21:26,549 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-16 21:21:46] 2025-05-17 01:21:26,549 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-16 21:21:46] 2025-05-17 01:21:26,549 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-16 21:21:46] 2025-05-17 01:21:26,549 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-16 21:21:46] 2025-05-17 01:21:26,549 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-16 21:21:46] 2025-05-17 01:21:26,549 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-16 21:21:46] 2025-05-17 01:21:26,549 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-16 21:21:46] 2025-05-17 01:21:26,550 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-16 21:21:46] 2025-05-17 01:21:26,550 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-16 21:21:46] 2025-05-17 01:21:26,550 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-16 21:21:46] 2025-05-17 01:21:26,550 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-16 21:21:46] 2025-05-17 01:21:26,550 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-16 21:21:46] 2025-05-17 01:21:26,550 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-16 21:21:46] 2025-05-17 01:21:26,550 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-16 21:21:46] 2025-05-17 01:21:26,551 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-16 21:21:46] 2025-05-17 01:21:26,551 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-16 21:21:46] 2025-05-17 01:21:26,551 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-16 21:21:46] 2025-05-17 01:21:26,551 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-16 21:21:46] 2025-05-17 01:21:26,551 | INFO     | job 6652057998 has completed (purged errors)
[2025-05-16 21:21:46] 2025-05-17 01:21:26,551 | INFO     | overall cleanup function is called
[2025-05-16 21:21:46] 2025-05-17 01:21:27,559 | INFO     | --- collectZombieJob: --- 10, [13666]
[2025-05-16 21:21:46] 2025-05-17 01:21:27,559 | INFO     | zombie collector waiting for pid 13666
[2025-05-16 21:21:46] 2025-05-17 01:21:27,559 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-16 21:21:46] 2025-05-17 01:21:27,559 | INFO     | collected zombie processes
[2025-05-16 21:21:46] 2025-05-17 01:21:27,560 | INFO     | will attempt to kill all subprocesses of pid=13666
[2025-05-16 21:21:46] 2025-05-17 01:21:27,652 | INFO     | process IDs to be killed: [13666] (in reverse order)
[2025-05-16 21:21:46] 2025-05-17 01:21:27,707 | WARNING  | found no corresponding commands to process id(s)
[2025-05-16 21:21:46] 2025-05-17 01:21:27,707 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-16 21:21:46] 2025-05-17 01:21:27,711 | INFO     | did not find any defunct processes belonging to 13666
[2025-05-16 21:21:46] 2025-05-17 01:21:27,714 | INFO     | did not find any defunct processes belonging to 13666
[2025-05-16 21:21:46] 2025-05-17 01:21:27,714 | INFO     | ready for new job
[2025-05-16 21:21:46] 2025-05-17 01:21:27,715 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-16 21:21:46] 2025-05-17 01:21:27,716 | INFO     | **************************************
[2025-05-16 21:21:46] 2025-05-17 01:21:27,716 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-16 21:21:46] 2025-05-17 01:21:27,716 | INFO     | **************************************
[2025-05-16 21:21:46] 2025-05-17 01:21:27,717 | INFO     | 
[2025-05-16 21:21:46] 2025-05-17 01:21:27,717 | INFO     | architecture information:
[2025-05-16 21:21:46] 2025-05-17 01:21:27,718 | INFO     | executing command: cat /etc/os-release
[2025-05-16 21:21:46] 2025-05-17 01:21:27,734 | INFO     | cat /etc/os-release:
[2025-05-16 21:21:46] NAME="CentOS Linux"
[2025-05-16 21:21:46] VERSION="7 (Core)"
[2025-05-16 21:21:46] ID="centos"
[2025-05-16 21:21:46] ID_LIKE="rhel fedora"
[2025-05-16 21:21:46] VERSION_ID="7"
[2025-05-16 21:21:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-16 21:21:46] ANSI_COLOR="0;31"
[2025-05-16 21:21:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-16 21:21:46] HOME_URL="https://www.centos.org/"
[2025-05-16 21:21:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-16 21:21:46] 
[2025-05-16 21:21:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-16 21:21:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-16 21:21:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-16 21:21:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-16 21:21:46] 
[2025-05-16 21:21:46] 2025-05-17 01:21:27,735 | INFO     | **************************************
[2025-05-16 21:21:46] 2025-05-17 01:21:28,238 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-16 21:21:46] 2025-05-17 01:21:28,256 | INFO     | sufficient remaining disk space (29402071040 B)
[2025-05-16 21:21:46] 2025-05-17 01:21:28,256 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-16 21:21:46] 2025-05-17 01:21:28,257 | INFO     | current server update state: UPDATING_FINAL
[2025-05-16 21:21:46] 2025-05-17 01:21:28,257 | INFO     | update_server=False
[2025-05-16 21:21:46] 2025-05-17 01:21:28,257 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-16 21:21:46] 2025-05-17 01:21:28,257 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-16 21:21:46] 2025-05-17 01:21:28,258 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-16 21:21:46] 2025-05-17 01:21:28,262 | INFO     | all data control threads have been joined
[2025-05-16 21:21:46] 2025-05-17 01:21:28,467 | INFO     | found 0 job(s) in 20 queues
[2025-05-16 21:21:46] 2025-05-17 01:21:28,467 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-16 21:21:46] 2025-05-17 01:21:28,467 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-16 21:21:46] 2025-05-17 01:21:28,760 | INFO     | all payload control threads have been joined
[2025-05-16 21:21:46] 2025-05-17 01:21:28,973 | INFO     | all job control threads have been joined
[2025-05-16 21:21:46] 2025-05-17 01:21:29,210 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-16 21:21:46] 2025-05-17 01:21:29,210 | INFO     | aborting loop
[2025-05-16 21:21:46] 2025-05-17 01:21:29,263 | INFO     | [job] retrieve thread has finished
[2025-05-16 21:21:46] 2025-05-17 01:21:29,263 | INFO     | [job] queue monitor thread has finished
[2025-05-16 21:21:46] 2025-05-17 01:21:29,267 | INFO     | [data] control thread has finished
[2025-05-16 21:21:46] 2025-05-17 01:21:29,286 | INFO     | [payload] validate_pre thread has finished
[2025-05-16 21:21:46] 2025-05-17 01:21:29,390 | INFO     | [data] copytool_in thread has finished
[2025-05-16 21:21:46] 2025-05-17 01:21:29,511 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-16 21:21:46] 2025-05-17 01:21:29,655 | INFO     | [payload] validate_post thread has finished
[2025-05-16 21:21:46] 2025-05-17 01:21:29,765 | INFO     | [payload] control thread has finished
[2025-05-16 21:21:46] 2025-05-17 01:21:29,978 | INFO     | [job] control thread has finished
[2025-05-16 21:21:46] 2025-05-17 01:21:30,215 | INFO     | [job] job monitor thread has finished
[2025-05-16 21:21:46] 2025-05-17 01:21:30,255 | INFO     | [job] validate thread has finished
[2025-05-16 21:21:46] 2025-05-17 01:21:30,259 | INFO     | [job] create_data_payload thread has finished
[2025-05-16 21:21:46] 2025-05-17 01:21:30,416 | INFO     | [payload] execute_payloads thread has finished
[2025-05-16 21:21:46] 2025-05-17 01:21:30,681 | INFO     | [payload] failed_post thread has finished
[2025-05-16 21:21:46] 2025-05-17 01:21:31,516 | INFO     | [data] copytool_out thread has finished
[2025-05-16 21:21:46] 2025-05-17 01:21:32,263 | INFO     | [data] queue_monitor thread has finished
[2025-05-16 21:21:46] 2025-05-17 01:21:38,526 | INFO     | job.realtimelogging is not enabled
[2025-05-16 21:21:46] 2025-05-17 01:21:39,532 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-16 21:21:46] 2025-05-17 01:21:41,423 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139801276966720)>', '<ExcThread(monitor, started 139800162064128)>']
[2025-05-16 21:21:46] 2025-05-17 01:21:41,528 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-16 21:21:46] 2025-05-17 01:21:41,528 | INFO     | [monitor] control thread has ended
[2025-05-16 21:21:46] 2025-05-17 01:21:46,449 | INFO     | all workflow threads have been joined
[2025-05-16 21:21:46] 2025-05-17 01:21:46,449 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-16 21:21:46] 2025-05-17 01:21:46,449 | INFO     | traces error code: 0
[2025-05-16 21:21:46] 2025-05-17 01:21:46,449 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-16 21:21:46] 2025-05-17 01:21:46,539 [wrapper] ==== pilot stdout END ====
[2025-05-16 21:21:46] 2025-05-17 01:21:46,542 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-16 21:21:46] 2025-05-17 01:21:46,545 [wrapper] pilotpid: 7277
[2025-05-16 21:21:46] 2025-05-17 01:21:46,549 [wrapper] Pilot exit status: 0
[2025-05-16 21:21:46] 2025-05-17 01:21:46,563 [wrapper] pandaids: 6652057998
[2025-05-16 21:21:46] 2025-05-17 01:21:46,599 [wrapper] cleanup supervisor_pilot  5632 7278
[2025-05-16 21:21:46] 2025-05-17 01:21:46,603 [wrapper] Test setup, not cleaning
[2025-05-16 21:21:46] 2025-05-17 01:21:46,607 [wrapper] apfmon messages muted
[2025-05-16 21:21:46] 2025-05-17 01:21:46,611 [wrapper] ==== wrapper stdout END ====
[2025-05-16 21:21:46] 2025-05-17 01:21:46,615 [wrapper] ==== wrapper stderr END ====
[2025-05-16 21:21:46]  *** Error codes and diagnostics ***
[2025-05-16 21:21:46]     "exeErrorCode": 0,
[2025-05-16 21:21:46]     "exeErrorDiag": "",
[2025-05-16 21:21:46]     "pilotErrorCode": 0,
[2025-05-16 21:21:46]     "pilotErrorDiag": "",
[2025-05-16 21:21:46]  *** Listing of results directory ***
[2025-05-16 21:21:46] total 407184
[2025-05-16 21:21:46] -rw-r--r-- 1 boincer umatlas    495897 May 16 16:13 pilot3.tar.gz
[2025-05-16 21:21:46] -rw-r--r-- 1 boincer umatlas      5111 May 16 16:25 queuedata.json
[2025-05-16 21:21:46] -rwx------ 1 boincer umatlas     37140 May 16 16:27 runpilot2-wrapper.sh
[2025-05-16 21:21:46] -rw-r--r-- 1 boincer umatlas       100 May 16 19:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-16 21:21:46] -rwxr-xr-x 1 boincer umatlas      7986 May 16 19:45 run_atlas
[2025-05-16 21:21:46] -rw-r--r-- 1 boincer umatlas       105 May 16 19:45 job.xml
[2025-05-16 21:21:46] -rw-r--r-- 2 boincer umatlas 220342251 May 16 19:45 EVNT.44638096._001205.pool.root.1
[2025-05-16 21:21:46] -rw-r--r-- 2 boincer umatlas     17569 May 16 19:45 start_atlas.sh
[2025-05-16 21:21:46] drwxrwx--x 2 boincer umatlas      4096 May 16 19:45 shared
[2025-05-16 21:21:46] -rw-r--r-- 2 boincer umatlas    508871 May 16 19:45 input.tar.gz
[2025-05-16 21:21:46] -rw-r--r-- 1 boincer umatlas         0 May 16 19:45 boinc_lockfile
[2025-05-16 21:21:46] -rw-r--r-- 1 boincer umatlas      2538 May 16 19:45 pandaJob.out
[2025-05-16 21:21:46] -rw------- 1 boincer umatlas       424 May 16 19:45 setup.sh.local
[2025-05-16 21:21:46] -rw------- 1 boincer umatlas    994643 May 16 19:45 agis_schedconf.cvmfs.json
[2025-05-16 21:21:46] -rw------- 1 boincer umatlas   1596741 May 16 19:45 agis_ddmendpoints.agis.ALL.json
[2025-05-16 21:21:46] drwx------ 4 boincer umatlas      4096 May 16 19:45 pilot3
[2025-05-16 21:21:46] -rw------- 1 boincer umatlas 190991083 May 16 21:20 HITS.44638099._044897.pool.root.1
[2025-05-16 21:21:46] -rw-r--r-- 1 boincer umatlas       529 May 16 21:21 boinc_task_state.xml
[2025-05-16 21:21:46] -rw------- 1 boincer umatlas        95 May 16 21:21 pilot_heartbeat.json
[2025-05-16 21:21:46] -rw------- 1 boincer umatlas      1047 May 16 21:21 memory_monitor_summary.json
[2025-05-16 21:21:46] -rw------- 1 boincer umatlas    358940 May 16 21:21 log.44638099._044897.job.log.tgz.1
[2025-05-16 21:21:46] -rw------- 1 boincer umatlas      7750 May 16 21:21 heartbeat.json
[2025-05-16 21:21:46] -rw-r--r-- 1 boincer umatlas      5868 May 16 21:21 init_data.xml
[2025-05-16 21:21:46] -rw-r--r-- 1 boincer umatlas      8192 May 16 21:21 boinc_mmap_file
[2025-05-16 21:21:46] -rw-r--r-- 1 boincer umatlas        27 May 16 21:21 wrapper_checkpoint.txt
[2025-05-16 21:21:46] -rw------- 1 boincer umatlas      4425 May 16 21:21 pilotlog.txt
[2025-05-16 21:21:46] -rw------- 1 boincer umatlas    535795 May 16 21:21 log.44638099._044897.job.log.1
[2025-05-16 21:21:46] -rw------- 1 boincer umatlas       357 May 16 21:21 output.list
[2025-05-16 21:21:46] -rw-r--r-- 1 boincer umatlas       620 May 16 21:21 runtime_log
[2025-05-16 21:21:46] -rw------- 1 boincer umatlas    911360 May 16 21:21 result.tar.gz
[2025-05-16 21:21:46] -rw------- 1 boincer umatlas       658 May 16 21:21 yn7KDmApGa7n9Rq4apOajLDm4fhM0noT9bVof3QYDmhSJKDmOQkVln.diag
[2025-05-16 21:21:46] -rw-r--r-- 1 boincer umatlas     11015 May 16 21:21 runtime_log.err
[2025-05-16 21:21:46] -rw-r--r-- 1 boincer umatlas     21260 May 16 21:21 stderr.txt
[2025-05-16 21:21:46] HITS file was successfully produced:
[2025-05-16 21:21:46] -rw------- 1 boincer umatlas 190991083 May 16 21:20 shared/HITS.pool.root.1
[2025-05-16 21:21:46]  *** Contents of shared directory: ***
[2025-05-16 21:21:46] total 403108
[2025-05-16 21:21:46] -rw-r--r-- 2 boincer umatlas 220342251 May 16 19:45 ATLAS.root_0
[2025-05-16 21:21:46] -rw-r--r-- 2 boincer umatlas     17569 May 16 19:45 start_atlas.sh
[2025-05-16 21:21:46] -rw-r--r-- 2 boincer umatlas    508871 May 16 19:45 input.tar.gz
[2025-05-16 21:21:46] -rw------- 1 boincer umatlas 190991083 May 16 21:20 HITS.pool.root.1
[2025-05-16 21:21:46] -rw------- 1 boincer umatlas    911360 May 16 21:21 result.tar.gz
21:21:48 (3668): run_atlas exited; CPU time 55928.924948
21:21:48 (3668): called boinc_finish(0)

</stderr_txt>
]]>

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