Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:05:20 (21677): wrapper (7.7.26015): starting
11:05:20 (21677): wrapper: running run_atlas (--nthreads 8)
[2025-05-17 11:05:20] Arguments: --nthreads 8
[2025-05-17 11:05:20] Threads: 8
[2025-05-17 11:05:20] Checking for CVMFS
[2025-05-17 11:05:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-17 11:05:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-17 11:05:21] Running cvmfs_config stat atlas.cern.ch
[2025-05-17 11:05:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-17 11:05:21] 2.11.2.0 6805 7082 73052 146094 1 256 12993519 25165825 4118 130560 0 5709873 99.808 6946899 1076 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-17 11:05:21] CVMFS is ok
[2025-05-17 11:05:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-17 11:05:21] Checking for apptainer binary...
[2025-05-17 11:05:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-17 11:05:21] Running /usr/bin/apptainer --version
[2025-05-17 11:05:21] apptainer version 1.3.2-1.el7
[2025-05-17 11:05:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-17 11:05:23] cg-vwn251.simple-grid.lan
[2025-05-17 11:05:23] apptainer works
[2025-05-17 11:05:23] Set ATHENA_PROC_NUMBER=8
[2025-05-17 11:05:23] Set ATHENA_CORE_NUMBER=8
[2025-05-17 11:05:23] Starting ATLAS job with PandaID=6651742029
[2025-05-17 11:05:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-17 16:36:31]  *** The last 200 lines of the pilot log: ***
[2025-05-17 16:36:31] 2025-05-17 14:22:39,756 | INFO     | chi2: 4.775890395506151
[2025-05-17 16:36:31] 2025-05-17 14:22:39,757 | INFO     | sum of square deviations: 8711530780.0
[2025-05-17 16:36:31] 2025-05-17 14:22:39,763 | INFO     | sum of deviations: 177335294658.00003
[2025-05-17 16:36:31] 2025-05-17 14:22:39,764 | INFO     | mean x: 1747482054.5
[2025-05-17 16:36:31] 2025-05-17 14:22:39,764 | INFO     | mean y: 2442247.4407894737
[2025-05-17 16:36:31] 2025-05-17 14:22:39,764 | INFO     | -- intersect: -35569979278.72465
[2025-05-17 16:36:31] 2025-05-17 14:22:39,764 | INFO     | intersect: -35569979278.72465
[2025-05-17 16:36:31] 2025-05-17 14:22:39,764 | INFO     | chi2: 4.001774893988503
[2025-05-17 16:36:31] 2025-05-17 14:22:39,765 | INFO     | current chi2=4.001774893988503 (change=16.208820500697584 %)
[2025-05-17 16:36:31] 2025-05-17 14:22:39,765 | INFO     | right removable region: 303
[2025-05-17 16:36:31] 2025-05-17 14:22:39,765 | INFO     | sum of square deviations: 8711530780.0
[2025-05-17 16:36:31] 2025-05-17 14:22:39,768 | INFO     | sum of deviations: 81942597927.49998
[2025-05-17 16:36:31] 2025-05-17 14:22:39,769 | INFO     | mean x: 1747482359.5
[2025-05-17 16:36:31] 2025-05-17 14:22:39,769 | INFO     | mean y: 2463264.9309210526
[2025-05-17 16:36:31] 2025-05-17 14:22:39,769 | INFO     | -- intersect: -16434744843.04611
[2025-05-17 16:36:31] 2025-05-17 14:22:39,769 | INFO     | intersect: -16434744843.04611
[2025-05-17 16:36:31] 2025-05-17 14:22:39,774 | INFO     | chi2: 2.2485711292583046
[2025-05-17 16:36:31] 2025-05-17 14:22:39,774 | INFO     | current chi2=2.2485711292583046 (change=52.91828448630048 %)
[2025-05-17 16:36:31] 2025-05-17 14:22:39,775 | INFO     | sum of square deviations: 8288713550.0
[2025-05-17 16:36:31] 2025-05-17 14:22:39,778 | INFO     | sum of deviations: 26358961563.999996
[2025-05-17 16:36:31] 2025-05-17 14:22:39,778 | INFO     | mean x: 1747482512.0
[2025-05-17 16:36:31] 2025-05-17 14:22:39,778 | INFO     | mean y: 2483313.0401337794
[2025-05-17 16:36:31] 2025-05-17 14:22:39,778 | INFO     | -- intersect: -5554690799.650751
[2025-05-17 16:36:31] 2025-05-17 14:22:39,779 | INFO     | intersect: -5554690799.650751
[2025-05-17 16:36:31] 2025-05-17 14:22:39,779 | INFO     | chi2: 1.0894552472301013
[2025-05-17 16:36:31] 2025-05-17 14:22:39,779 | INFO     | current chi2=1.0894552472301013 (change=51.548997803353444 %)
[2025-05-17 16:36:31] 2025-05-17 14:22:39,780 | INFO     | sum of square deviations: 7879803557.5
[2025-05-17 16:36:31] 2025-05-17 14:22:39,783 | INFO     | sum of deviations: 5539014872.5
[2025-05-17 16:36:31] 2025-05-17 14:22:39,784 | INFO     | mean x: 1747482664.5
[2025-05-17 16:36:31] 2025-05-17 14:22:39,784 | INFO     | mean y: 2491019.0578231295
[2025-05-17 16:36:31] 2025-05-17 14:22:39,784 | INFO     | -- intersect: -1225881287.113266
[2025-05-17 16:36:31] 2025-05-17 14:22:39,784 | INFO     | intersect: -1225881287.113266
[2025-05-17 16:36:31] 2025-05-17 14:22:39,785 | INFO     | chi2: 0.8057636471573995
[2025-05-17 16:36:31] 2025-05-17 14:22:39,785 | INFO     | current chi2=0.8057636471573995 (change=26.03976627713502 %)
[2025-05-17 16:36:31] 2025-05-17 14:22:39,786 | INFO     | sum of square deviations: 7484568240.0
[2025-05-17 16:36:31] 2025-05-17 14:22:39,789 | INFO     | sum of deviations: 2766353659.999996
[2025-05-17 16:36:31] 2025-05-17 14:22:39,789 | INFO     | mean x: 1747482817.0
[2025-05-17 16:36:31] 2025-05-17 14:22:39,789 | INFO     | mean y: 2492084.802768166
[2025-05-17 16:36:31] 2025-05-17 14:22:39,789 | INFO     | -- intersect: -643390928.2960681
[2025-05-17 16:36:31] 2025-05-17 14:22:39,789 | INFO     | intersect: -643390928.2960681
[2025-05-17 16:36:31] 2025-05-17 14:22:39,790 | INFO     | chi2: 0.8033606106638956
[2025-05-17 16:36:31] 2025-05-17 14:22:39,790 | INFO     | current chi2=0.8033606106638956 (change=0.2982309393060028 %)
[2025-05-17 16:36:31] 2025-05-17 14:22:39,790 | INFO     | left removable region: 40
[2025-05-17 16:36:31] 2025-05-17 14:22:39,791 | INFO     | sum of square deviations: 5640782972.0
[2025-05-17 16:36:31] 2025-05-17 14:22:39,793 | INFO     | sum of deviations: 12746456788.000004
[2025-05-17 16:36:31] 2025-05-17 14:22:39,793 | INFO     | mean x: 1747483244.0
[2025-05-17 16:36:31] 2025-05-17 14:22:39,793 | INFO     | mean y: 2503374.1939163497
[2025-05-17 16:36:31] 2025-05-17 14:22:39,794 | INFO     | -- intersect: -3946278163.398639
[2025-05-17 16:36:31] 2025-05-17 14:22:39,794 | INFO     | intersect: -3946278163.398639
[2025-05-17 16:36:31] 2025-05-17 14:22:39,794 | INFO     | chi2: 0.0006841840043229199
[2025-05-17 16:36:31] 2025-05-17 14:22:39,794 | INFO     | -- intersect: -3946278163.398639
[2025-05-17 16:36:31] 2025-05-17 14:22:39,795 | INFO     | current memory leak: 2.26 B/s (using 263 data points, chi2=0.00)
[2025-05-17 16:36:31] 2025-05-17 14:22:39,796 | INFO     | ..............................
[2025-05-17 16:36:31] 2025-05-17 14:22:39,796 | INFO     | . Timing measurements:
[2025-05-17 16:36:31] 2025-05-17 14:22:39,796 | INFO     | . get job = 0 s
[2025-05-17 16:36:31] 2025-05-17 14:22:39,797 | INFO     | . initial setup = 1 s
[2025-05-17 16:36:31] 2025-05-17 14:22:39,797 | INFO     | . payload setup = 24 s
[2025-05-17 16:36:31] 2025-05-17 14:22:39,797 | INFO     | . stage-in = 0 s
[2025-05-17 16:36:31] 2025-05-17 14:22:39,797 | INFO     | . payload execution = 18862 s
[2025-05-17 16:36:31] 2025-05-17 14:22:39,797 | INFO     | . stage-out = 4 s
[2025-05-17 16:36:31] 2025-05-17 14:22:39,797 | INFO     | . log creation = 1 s
[2025-05-17 16:36:31] 2025-05-17 14:22:39,797 | INFO     | ..............................
[2025-05-17 16:36:31] 2025-05-17 14:22:40,116 | INFO     | 
[2025-05-17 16:36:31] 2025-05-17 14:22:40,117 | INFO     | job summary report
[2025-05-17 16:36:31] 2025-05-17 14:22:40,117 | INFO     | --------------------------------------------------
[2025-05-17 16:36:31] 2025-05-17 14:22:40,117 | INFO     | PanDA job id: 6651742029
[2025-05-17 16:36:31] 2025-05-17 14:22:40,117 | INFO     | task id: 44638099
[2025-05-17 16:36:31] 2025-05-17 14:22:40,117 | INFO     | errors: (none)
[2025-05-17 16:36:31] 2025-05-17 14:22:40,117 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-17 16:36:31] 2025-05-17 14:22:40,117 | INFO     | pilot state: finished 
[2025-05-17 16:36:31] 2025-05-17 14:22:40,117 | INFO     | transexitcode: 0
[2025-05-17 16:36:31] 2025-05-17 14:22:40,118 | INFO     | exeerrorcode: 0
[2025-05-17 16:36:31] 2025-05-17 14:22:40,118 | INFO     | exeerrordiag: 
[2025-05-17 16:36:31] 2025-05-17 14:22:40,118 | INFO     | exitcode: 0
[2025-05-17 16:36:31] 2025-05-17 14:22:40,118 | INFO     | exitmsg: OK
[2025-05-17 16:36:31] 2025-05-17 14:22:40,118 | INFO     | cpuconsumptiontime: 70224 s
[2025-05-17 16:36:31] 2025-05-17 14:22:40,118 | INFO     | nevents: 400
[2025-05-17 16:36:31] 2025-05-17 14:22:40,118 | INFO     | neventsw: 0
[2025-05-17 16:36:31] 2025-05-17 14:22:40,118 | INFO     | pid: 6827
[2025-05-17 16:36:31] 2025-05-17 14:22:40,118 | INFO     | pgrp: 6827
[2025-05-17 16:36:31] 2025-05-17 14:22:40,118 | INFO     | corecount: 8
[2025-05-17 16:36:31] 2025-05-17 14:22:40,119 | INFO     | event service: False
[2025-05-17 16:36:31] 2025-05-17 14:22:40,119 | INFO     | sizes: {0: 2393539, 1: 2393738, 10: 2393944, 12: 2393972, 18890: 2425728, 18896: 2434669, 18897: 2434853, 18993: 2435023}
[2025-05-17 16:36:31] 2025-05-17 14:22:40,119 | INFO     | --------------------------------------------------
[2025-05-17 16:36:31] 2025-05-17 14:22:40,119 | INFO     | 
[2025-05-17 16:36:31] 2025-05-17 14:22:40,119 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-05-17 16:36:31] 2025-05-17 14:22:40,305 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-17 16:36:31] 2025-05-17 14:22:40,305 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-17 16:36:31] 2025-05-17 14:22:40,305 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-17 16:36:31] 2025-05-17 14:22:40,306 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-17 16:36:31] 2025-05-17 14:22:40,306 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-17 16:36:31] 2025-05-17 14:22:40,306 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-17 16:36:31] 2025-05-17 14:22:40,306 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-17 16:36:31] 2025-05-17 14:22:40,306 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-17 16:36:31] 2025-05-17 14:22:40,306 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-17 16:36:31] 2025-05-17 14:22:40,306 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-17 16:36:31] 2025-05-17 14:22:40,306 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-17 16:36:31] 2025-05-17 14:22:40,306 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-17 16:36:31] 2025-05-17 14:22:40,306 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-17 16:36:31] 2025-05-17 14:22:40,307 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-17 16:36:31] 2025-05-17 14:22:40,307 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-17 16:36:31] 2025-05-17 14:22:40,307 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-17 16:36:31] 2025-05-17 14:22:40,307 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-17 16:36:31] 2025-05-17 14:22:40,307 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-17 16:36:31] 2025-05-17 14:22:40,307 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-17 16:36:31] 2025-05-17 14:22:40,307 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-17 16:36:31] 2025-05-17 14:22:40,307 | INFO     | job 6651742029 has completed (purged errors)
[2025-05-17 16:36:31] 2025-05-17 14:22:40,307 | INFO     | overall cleanup function is called
[2025-05-17 16:36:31] 2025-05-17 14:22:41,316 | INFO     | --- collectZombieJob: --- 10, [6827]
[2025-05-17 16:36:31] 2025-05-17 14:22:41,317 | INFO     | zombie collector waiting for pid 6827
[2025-05-17 16:36:31] 2025-05-17 14:22:41,317 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-17 16:36:31] 2025-05-17 14:22:41,317 | INFO     | collected zombie processes
[2025-05-17 16:36:31] 2025-05-17 14:22:41,317 | INFO     | will attempt to kill all subprocesses of pid=6827
[2025-05-17 16:36:31] 2025-05-17 14:22:41,470 | INFO     | process IDs to be killed: [6827] (in reverse order)
[2025-05-17 16:36:31] 2025-05-17 14:22:41,746 | INFO     | PID=27355 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-05-17 16:36:31] 2025-05-17 14:22:41,747 | INFO     | .. there are 9 such processes running
[2025-05-17 16:36:31] 2025-05-17 14:22:41,923 | WARNING  | found no corresponding commands to process id(s)
[2025-05-17 16:36:31] 2025-05-17 14:22:41,923 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-17 16:36:31] 2025-05-17 14:22:41,927 | INFO     | did not find any defunct processes belonging to 6827
[2025-05-17 16:36:31] 2025-05-17 14:22:41,930 | INFO     | did not find any defunct processes belonging to 6827
[2025-05-17 16:36:31] 2025-05-17 14:22:41,930 | INFO     | ready for new job
[2025-05-17 16:36:31] 2025-05-17 14:22:41,930 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-17 16:36:31] 2025-05-17 14:22:41,932 | INFO     | **************************************
[2025-05-17 16:36:31] 2025-05-17 14:22:41,933 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-17 16:36:31] 2025-05-17 14:22:41,933 | INFO     | **************************************
[2025-05-17 16:36:31] 2025-05-17 14:22:41,933 | INFO     | 
[2025-05-17 16:36:31] 2025-05-17 14:22:41,933 | INFO     | pilot is running in a VM
[2025-05-17 16:36:31] 2025-05-17 14:22:41,934 | INFO     | architecture information:
[2025-05-17 16:36:31] 2025-05-17 14:22:41,934 | INFO     | executing command: cat /etc/os-release
[2025-05-17 16:36:31] 2025-05-17 14:22:41,988 | INFO     | cat /etc/os-release:
[2025-05-17 16:36:31] NAME="CentOS Linux"
[2025-05-17 16:36:31] VERSION="7 (Core)"
[2025-05-17 16:36:31] ID="centos"
[2025-05-17 16:36:31] ID_LIKE="rhel fedora"
[2025-05-17 16:36:31] VERSION_ID="7"
[2025-05-17 16:36:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-17 16:36:31] ANSI_COLOR="0;31"
[2025-05-17 16:36:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-17 16:36:31] HOME_URL="https://www.centos.org/"
[2025-05-17 16:36:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-17 16:36:31] 
[2025-05-17 16:36:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-17 16:36:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-17 16:36:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-17 16:36:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-17 16:36:31] 
[2025-05-17 16:36:31] 2025-05-17 14:22:41,988 | INFO     | **************************************
[2025-05-17 16:36:31] 2025-05-17 14:22:42,492 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-05-17 16:36:31] 2025-05-17 14:22:42,556 | INFO     | sufficient remaining disk space (496710451200 B)
[2025-05-17 16:36:31] 2025-05-17 14:22:42,557 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-17 16:36:31] 2025-05-17 14:22:42,557 | INFO     | current server update state: UPDATING_FINAL
[2025-05-17 16:36:31] 2025-05-17 14:22:42,557 | INFO     | update_server=False
[2025-05-17 16:36:31] 2025-05-17 14:22:42,557 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-17 16:36:31] 2025-05-17 14:22:42,558 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-17 16:36:31] 2025-05-17 14:22:42,559 | INFO     | found 0 job(s) in 20 queues
[2025-05-17 16:36:31] 2025-05-17 14:22:42,559 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-17 16:36:31] 2025-05-17 14:22:42,559 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-17 16:36:31] 2025-05-17 14:22:42,606 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-17 16:36:31] 2025-05-17 14:22:42,607 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-17 16:36:31] 2025-05-17 14:22:42,607 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-17 16:36:31] 2025-05-17 14:22:42,607 | INFO     | will abort loop
[2025-05-17 16:36:31] 2025-05-17 14:22:42,992 | INFO     | all payload control threads have been joined
[2025-05-17 16:36:31] 2025-05-17 14:22:43,009 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-17 16:36:31] 2025-05-17 14:22:43,217 | INFO     | all data control threads have been joined
[2025-05-17 16:36:31] 2025-05-17 14:22:43,564 | INFO     | [job] retrieve thread has finished
[2025-05-17 16:36:31] 2025-05-17 14:22:43,613 | INFO     | [job] job monitor thread has finished
[2025-05-17 16:36:31] 2025-05-17 14:22:43,690 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-17 16:36:31] 2025-05-17 14:22:43,690 | INFO     | [payload] validate_pre thread has finished
[2025-05-17 16:36:31] 2025-05-17 14:22:43,943 | INFO     | [payload] validate_post thread has finished
[2025-05-17 16:36:31] 2025-05-17 14:22:43,957 | INFO     | all job control threads have been joined
[2025-05-17 16:36:31] 2025-05-17 14:22:43,998 | INFO     | [payload] control thread has finished
[2025-05-17 16:36:31] 2025-05-17 14:22:44,110 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-17 16:36:31] 2025-05-17 14:22:44,178 | INFO     | [job] validate thread has finished
[2025-05-17 16:36:31] 2025-05-17 14:22:44,223 | INFO     | [data] control thread has finished
[2025-05-17 16:36:31] 2025-05-17 14:22:44,592 | INFO     | [payload] execute_payloads thread has finished
[2025-05-17 16:36:31] 2025-05-17 14:22:44,918 | INFO     | [payload] failed_post thread has finished
[2025-05-17 16:36:31] 2025-05-17 14:22:44,946 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-17 16:36:31] 2025-05-17 14:22:44,963 | INFO     | [job] control thread has finished
[2025-05-17 16:36:31] 2025-05-17 14:22:44,966 | INFO     | [job] create_data_payload thread has finished
[2025-05-17 16:36:31] 2025-05-17 14:22:44,968 | INFO     | [data] copytool_in thread has finished
[2025-05-17 16:36:31] 2025-05-17 14:22:45,016 | INFO     | [data] copytool_out thread has finished
[2025-05-17 16:36:31] 2025-05-17 14:22:45,953 | INFO     | [job] queue monitor thread has finished
[2025-05-17 16:36:31] 2025-05-17 14:22:48,119 | INFO     | [data] queue_monitor thread has finished
[2025-05-17 16:36:31] 2025-05-17 14:22:49,706 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139869336696640)>', '<ExcThread(monitor, started 139869109815040)>']
[2025-05-17 16:36:31] 2025-05-17 14:22:50,606 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-17 16:36:31] 2025-05-17 14:22:50,607 | INFO     | [monitor] control thread has ended
[2025-05-17 16:36:31] 2025-05-17 14:22:54,731 | INFO     | all workflow threads have been joined
[2025-05-17 16:36:31] 2025-05-17 14:22:54,732 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-17 16:36:31] 2025-05-17 14:22:54,732 | INFO     | traces error code: 0
[2025-05-17 16:36:31] 2025-05-17 14:22:54,732 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-17 16:36:31] 2025-05-17 14:22:55,059 [wrapper] ==== pilot stdout END ====
[2025-05-17 16:36:31] 2025-05-17 14:22:55,126 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-17 16:36:31] 2025-05-17 14:22:55,154 [wrapper] pilotpid: 27355
[2025-05-17 16:36:31] 2025-05-17 14:22:55,216 [wrapper] Pilot exit status: 0
[2025-05-17 16:36:31] 2025-05-17 14:22:55,394 [wrapper] pandaids: 6651742029
[2025-05-17 16:36:31] 2025-05-17 14:22:55,595 [wrapper] cleanup supervisor_pilot  7062 27356
[2025-05-17 16:36:31] 2025-05-17 14:22:55,623 [wrapper] Test setup, not cleaning
[2025-05-17 16:36:31] 2025-05-17 14:22:55,655 [wrapper] apfmon messages muted
[2025-05-17 16:36:31] 2025-05-17 14:22:55,682 [wrapper] ==== wrapper stdout END ====
[2025-05-17 16:36:31] 2025-05-17 14:22:55,709 [wrapper] ==== wrapper stderr END ====
[2025-05-17 16:36:31]  *** Error codes and diagnostics ***
[2025-05-17 16:36:31]     "exeErrorCode": 0,
[2025-05-17 16:36:31]     "exeErrorDiag": "",
[2025-05-17 16:36:31]     "pilotErrorCode": 0,
[2025-05-17 16:36:31]     "pilotErrorDiag": "",
[2025-05-17 16:36:31]  *** Listing of results directory ***
[2025-05-17 16:36:31] total 417584
[2025-05-17 16:36:31] -rw-r--r--. 1 boinc boinc    503527 Apr  3 09:42 pilot3.tar.gz
[2025-05-17 16:36:31] -rw-r--r--. 1 boinc boinc      5111 May 16 14:55 queuedata.json
[2025-05-17 16:36:31] -rwx------. 1 boinc boinc     37140 May 16 14:56 runpilot2-wrapper.sh
[2025-05-17 16:36:31] -rw-r--r--. 1 boinc boinc       100 May 17 11:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-17 16:36:31] -rwxr-xr-x. 1 boinc boinc      7986 May 17 11:05 run_atlas
[2025-05-17 16:36:31] -rw-r--r--. 1 boinc boinc       105 May 17 11:05 job.xml
[2025-05-17 16:36:31] -rw-r--r--. 2 boinc boinc 219407637 May 17 11:05 EVNT.44638096._000777.pool.root.1
[2025-05-17 16:36:31] -rw-r--r--. 2 boinc boinc     17569 May 17 11:05 start_atlas.sh
[2025-05-17 16:36:31] drwxrwx--x. 2 boinc boinc        68 May 17 11:05 shared
[2025-05-17 16:36:31] -rw-r--r--. 2 boinc boinc    517090 May 17 11:05 input.tar.gz
[2025-05-17 16:36:31] -rw-r--r--. 1 boinc boinc      6370 May 17 11:05 init_data.xml
[2025-05-17 16:36:31] -rw-r--r--. 1 boinc boinc         0 May 17 11:05 boinc_lockfile
[2025-05-17 16:36:31] -rw-r--r--. 1 boinc boinc      2538 May 17 11:05 pandaJob.out
[2025-05-17 16:36:31] -rw-------. 1 boinc boinc       424 May 17 11:05 setup.sh.local
[2025-05-17 16:36:31] -rw-------. 1 boinc boinc    994635 May 17 11:05 agis_schedconf.cvmfs.json
[2025-05-17 16:36:31] drwx------. 4 boinc boinc      4096 May 17 11:05 pilot3
[2025-05-17 16:36:31] -rw-------. 1 boinc boinc 200192541 May 17 16:19 HITS.44638099._040232.pool.root.1
[2025-05-17 16:36:31] -rw-r--r--. 1 boinc boinc       531 May 17 16:19 boinc_task_state.xml
[2025-05-17 16:36:31] -rw-------. 1 boinc boinc      1019 May 17 16:20 memory_monitor_summary.json
[2025-05-17 16:36:31] -rw-------. 1 boinc boinc   1596741 May 17 16:20 agis_ddmendpoints.agis.ALL.json
[2025-05-17 16:36:31] -rw-------. 1 boinc boinc    432649 May 17 16:21 log.44638099._040232.job.log.tgz.1
[2025-05-17 16:36:31] -rw-------. 1 boinc boinc        95 May 17 16:22 pilot_heartbeat.json
[2025-05-17 16:36:31] -rw-------. 1 boinc boinc      7688 May 17 16:22 heartbeat.json
[2025-05-17 16:36:31] -rw-------. 1 boinc boinc      4725 May 17 16:22 pilotlog.txt
[2025-05-17 16:36:31] -rw-------. 1 boinc boinc   1648975 May 17 16:22 log.44638099._040232.job.log.1
[2025-05-17 16:36:31] -rw-------. 1 boinc boinc       357 May 17 16:22 output.list
[2025-05-17 16:36:31] -rw-r--r--. 1 boinc boinc       620 May 17 16:22 runtime_log
[2025-05-17 16:36:31] -rw-------. 1 boinc boinc   2099200 May 17 16:22 result.tar.gz
[2025-05-17 16:36:31] -rw-------. 1 boinc boinc       657 May 17 16:22 ZBLLDmtm9Z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmN2LKDmcZytQn.diag
[2025-05-17 16:36:31] -rw-r--r--. 1 boinc boinc     11013 May 17 16:22 runtime_log.err
[2025-05-17 16:36:31] -rw-r--r--. 1 boinc boinc        28 May 17 16:36 wrapper_checkpoint.txt
[2025-05-17 16:36:31] -rw-r--r--. 1 boinc boinc      8192 May 17 16:36 boinc_mmap_file
[2025-05-17 16:36:31] -rw-r--r--. 1 boinc boinc     20629 May 17 16:36 stderr.txt
[2025-05-17 16:36:31] HITS file was successfully produced:
[2025-05-17 16:36:31] -rw-------. 1 boinc boinc 200192541 May 17 16:19 shared/HITS.pool.root.1
[2025-05-17 16:36:31]  *** Contents of shared directory: ***
[2025-05-17 16:36:31] total 412352
[2025-05-17 16:36:31] -rw-r--r--. 2 boinc boinc 219407637 May 17 11:05 ATLAS.root_0
[2025-05-17 16:36:31] -rw-r--r--. 2 boinc boinc     17569 May 17 11:05 start_atlas.sh
[2025-05-17 16:36:31] -rw-r--r--. 2 boinc boinc    517090 May 17 11:05 input.tar.gz
[2025-05-17 16:36:31] -rw-------. 1 boinc boinc 200192541 May 17 16:19 HITS.pool.root.1
[2025-05-17 16:36:31] -rw-------. 1 boinc boinc   2099200 May 17 16:22 result.tar.gz
16:36:33 (21677): run_atlas exited; CPU time 70471.883894
16:36:33 (21677): called boinc_finish(0)

</stderr_txt>
]]>

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