Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:04:05 (32405): wrapper (7.7.26015): starting
18:04:05 (32405): wrapper: running run_atlas (--nthreads 12)
[2025-05-16 18:04:05] Arguments: --nthreads 12
[2025-05-16 18:04:05] Threads: 12
[2025-05-16 18:04:05] Checking for CVMFS
[2025-05-16 18:04:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-16 18:04:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-16 18:04:05] Running cvmfs_config stat atlas.cern.ch
[2025-05-16 18:04:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-16 18:04:05] 2.11.2.0 2987 8851 82964 146078 1 56 18290871 20275200 1 130560 0 3337449 99.985 1699078 53906 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-05-16 18:04:05] CVMFS is ok
[2025-05-16 18:04:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-16 18:04:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-16 18:04:05] Further information can be found at the LHC@home message board.
[2025-05-16 18:04:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-16 18:04:05] Checking for apptainer binary...
[2025-05-16 18:04:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-16 18:04:05] Running /usr/bin/apptainer --version
[2025-05-16 18:04:05] apptainer version 1.3.2-1.el7
[2025-05-16 18:04:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-16 18:04:06] c-205-19.aglt2.org
[2025-05-16 18:04:06] apptainer works
[2025-05-16 18:04:06] Set ATHENA_PROC_NUMBER=12
[2025-05-16 18:04:06] Set ATHENA_CORE_NUMBER=12
[2025-05-16 18:04:06] Starting ATLAS job with PandaID=6652055095
[2025-05-16 18:04:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-16 19:45:17]  *** The last 200 lines of the pilot log: ***
[2025-05-16 19:45:17]  is_tar=False
[2025-05-16 19:45:17]  lfn=log.44638099._043946.job.log.tgz.1
[2025-05-16 19:45:17]  mtime=0
[2025-05-16 19:45:17]  protocol_id=None
[2025-05-16 19:45:17]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-16 19:45:17]  replicas=None
[2025-05-16 19:45:17]  scope=mc23_13p6TeV
[2025-05-16 19:45:17]  status=None
[2025-05-16 19:45:17]  status_code=0
[2025-05-16 19:45:17]  storage_token=
[2025-05-16 19:45:17]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6652055095/log.44638099._043946.job.log.tgz.1
[2025-05-16 19:45:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3d/30/log.44638099._043946.job.log.tgz.1
[2025-05-16 19:45:17]  workdir=None
[2025-05-16 19:45:17] ]
[2025-05-16 19:45:17] 2025-05-16 23:44:51,507 | INFO     | transferring file log.44638099._043946.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6652055095/log.44638099._043946.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-05-16 19:45:17] 2025-05-16 23:44:51,507 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6652055095/log.44638099._043946.job.log.tgz.1 /tmp/boinchome/slots/0/log.44638099._043946.job
[2025-05-16 19:45:17] 2025-05-16 23:44:51,529 | INFO     | adding to output.list: log.44638099._043946.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3d/30/log.44638099._043946.job.log.tg
[2025-05-16 19:45:17] 2025-05-16 23:44:51,530 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-16 19:45:17] 2025-05-16 23:44:51,530 | INFO     | summary of transferred files:
[2025-05-16 19:45:17] 2025-05-16 23:44:51,531 | INFO     |  -- lfn=log.44638099._043946.job.log.tgz.1, status_code=0, status=transferred
[2025-05-16 19:45:17] 2025-05-16 23:44:51,531 | INFO     | stage-out finished correctly
[2025-05-16 19:45:17] 2025-05-16 23:44:51,616 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-16 19:45:17] 2025-05-16 23:44:53,073 | INFO     | monitor loop #450: job 0:6652055095 is in state 'finished'
[2025-05-16 19:45:17] 2025-05-16 23:44:53,073 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-16 19:45:17] 2025-05-16 23:44:53,527 | INFO     | job 6652055095 has state=finished
[2025-05-16 19:45:17] 2025-05-16 23:44:53,527 | INFO     | preparing for final server update for job 6652055095 in state='finished'
[2025-05-16 19:45:17] 2025-05-16 23:44:53,528 | INFO     | this job has now completed (state=finished)
[2025-05-16 19:45:17] 2025-05-16 23:44:53,528 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-16 19:45:17] 2025-05-16 23:44:53,528 | INFO     | log transfer has been attempted: DONE
[2025-05-16 19:45:17] 2025-05-16 23:44:53,528 | INFO     | job 6652055095 has finished - writing final server update
[2025-05-16 19:45:17] 2025-05-16 23:44:53,529 | INFO     | total number of processed events: 400 (read)
[2025-05-16 19:45:17] 2025-05-16 23:44:53,530 | INFO     | executing command: lscpu
[2025-05-16 19:45:17] 2025-05-16 23:44:53,559 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-16 19:45:17] 2025-05-16 23:44:55,576 | INFO     | monitor loop #451: job 0:6652055095 is in state 'finished'
[2025-05-16 19:45:17] 2025-05-16 23:44:55,576 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-16 19:45:17] 2025-05-16 23:44:56,908 | INFO     | PID=3738 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-05-16 19:45:17] 2025-05-16 23:44:58,079 | INFO     | monitor loop #452: job 0:6652055095 is in state 'finished'
[2025-05-16 19:45:17] 2025-05-16 23:44:58,079 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-16 19:45:17] 2025-05-16 23:44:58,203 | INFO     | CPU arch script returned: x86-64-v2
[2025-05-16 19:45:17] 2025-05-16 23:44:58,204 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6652055095/memory_monitor_summary.json (trf name=prmon)
[2025-05-16 19:45:17] 2025-05-16 23:44:58,204 | INFO     | extracted standard info from prmon json
[2025-05-16 19:45:17] 2025-05-16 23:44:58,205 | INFO     | extracted standard memory fields from prmon json
[2025-05-16 19:45:17] 2025-05-16 23:44:58,205 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-16 19:45:17] 2025-05-16 23:44:58,205 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-16 19:45:17] 2025-05-16 23:44:58,205 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-16 19:45:17] 2025-05-16 23:44:58,208 | INFO     | fitting pss+swap vs Time
[2025-05-16 19:45:17] 2025-05-16 23:44:58,208 | INFO     | sum of square deviations: 241429643.0
[2025-05-16 19:45:17] 2025-05-16 23:44:58,209 | INFO     | sum of deviations: 33413390683.0
[2025-05-16 19:45:17] 2025-05-16 23:44:58,209 | INFO     | mean x: 1747436169.5
[2025-05-16 19:45:17] 2025-05-16 23:44:58,209 | INFO     | mean y: 2615058.934782609
[2025-05-16 19:45:17] 2025-05-16 23:44:58,209 | INFO     | -- intersect: -241839135190.05396
[2025-05-16 19:45:17] 2025-05-16 23:44:58,209 | INFO     | intersect: -241839135190.05396
[2025-05-16 19:45:17] 2025-05-16 23:44:58,210 | INFO     | chi2: 2.2961698674800872
[2025-05-16 19:45:17] 2025-05-16 23:44:58,210 | INFO     | -- intersect: -241839135190.05396
[2025-05-16 19:45:17] 2025-05-16 23:44:58,210 | INFO     | current memory leak: 138.40 B/s (using 92 data points, chi2=2.30)
[2025-05-16 19:45:17] 2025-05-16 23:44:58,210 | INFO     | ..............................
[2025-05-16 19:45:17] 2025-05-16 23:44:58,210 | INFO     | . Timing measurements:
[2025-05-16 19:45:17] 2025-05-16 23:44:58,211 | INFO     | . get job = 0 s
[2025-05-16 19:45:17] 2025-05-16 23:44:58,211 | INFO     | . initial setup = 2 s
[2025-05-16 19:45:17] 2025-05-16 23:44:58,211 | INFO     | . payload setup = 7 s
[2025-05-16 19:45:17] 2025-05-16 23:44:58,211 | INFO     | . stage-in = 0 s
[2025-05-16 19:45:17] 2025-05-16 23:44:58,211 | INFO     | . payload execution = 6002 s
[2025-05-16 19:45:17] 2025-05-16 23:44:58,211 | INFO     | . stage-out = 0 s
[2025-05-16 19:45:17] 2025-05-16 23:44:58,211 | INFO     | . log creation = 0 s
[2025-05-16 19:45:17] 2025-05-16 23:44:58,211 | INFO     | ..............................
[2025-05-16 19:45:17] 2025-05-16 23:44:58,676 | INFO     | 
[2025-05-16 19:45:17] 2025-05-16 23:44:58,676 | INFO     | job summary report
[2025-05-16 19:45:17] 2025-05-16 23:44:58,676 | INFO     | --------------------------------------------------
[2025-05-16 19:45:17] 2025-05-16 23:44:58,676 | INFO     | PanDA job id: 6652055095
[2025-05-16 19:45:17] 2025-05-16 23:44:58,677 | INFO     | task id: 44638099
[2025-05-16 19:45:17] 2025-05-16 23:44:58,677 | INFO     | errors: (none)
[2025-05-16 19:45:17] 2025-05-16 23:44:58,677 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-16 19:45:17] 2025-05-16 23:44:58,677 | INFO     | pilot state: finished 
[2025-05-16 19:45:17] 2025-05-16 23:44:58,677 | INFO     | transexitcode: 0
[2025-05-16 19:45:17] 2025-05-16 23:44:58,677 | INFO     | exeerrorcode: 0
[2025-05-16 19:45:17] 2025-05-16 23:44:58,678 | INFO     | exeerrordiag: 
[2025-05-16 19:45:17] 2025-05-16 23:44:58,678 | INFO     | exitcode: 0
[2025-05-16 19:45:17] 2025-05-16 23:44:58,678 | INFO     | exitmsg: OK
[2025-05-16 19:45:17] 2025-05-16 23:44:58,678 | INFO     | cpuconsumptiontime: 58788 s
[2025-05-16 19:45:17] 2025-05-16 23:44:58,678 | INFO     | nevents: 400
[2025-05-16 19:45:17] 2025-05-16 23:44:58,678 | INFO     | neventsw: 0
[2025-05-16 19:45:17] 2025-05-16 23:44:58,678 | INFO     | pid: 10105
[2025-05-16 19:45:17] 2025-05-16 23:44:58,679 | INFO     | pgrp: 10105
[2025-05-16 19:45:17] 2025-05-16 23:44:58,679 | INFO     | corecount: 12
[2025-05-16 19:45:17] 2025-05-16 23:44:58,679 | INFO     | event service: False
[2025-05-16 19:45:17] 2025-05-16 23:44:58,679 | INFO     | sizes: {0: 2393710, 5: 2393916, 11: 2393972, 6014: 2420553, 6016: 2429550, 6022: 2429664}
[2025-05-16 19:45:17] 2025-05-16 23:44:58,679 | INFO     | --------------------------------------------------
[2025-05-16 19:45:17] 2025-05-16 23:44:58,679 | INFO     | 
[2025-05-16 19:45:17] 2025-05-16 23:44:58,680 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-16 19:45:17] 2025-05-16 23:44:58,704 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-16 19:45:17] 2025-05-16 23:44:58,705 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-16 19:45:17] 2025-05-16 23:44:58,705 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-16 19:45:17] 2025-05-16 23:44:58,705 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-16 19:45:17] 2025-05-16 23:44:58,705 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-16 19:45:17] 2025-05-16 23:44:58,705 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-16 19:45:17] 2025-05-16 23:44:58,705 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-16 19:45:17] 2025-05-16 23:44:58,706 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-16 19:45:17] 2025-05-16 23:44:58,706 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-16 19:45:17] 2025-05-16 23:44:58,706 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-16 19:45:17] 2025-05-16 23:44:58,706 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-16 19:45:17] 2025-05-16 23:44:58,706 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-16 19:45:17] 2025-05-16 23:44:58,706 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-16 19:45:17] 2025-05-16 23:44:58,707 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-16 19:45:17] 2025-05-16 23:44:58,707 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-16 19:45:17] 2025-05-16 23:44:58,707 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-16 19:45:17] 2025-05-16 23:44:58,707 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-16 19:45:17] 2025-05-16 23:44:58,707 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-16 19:45:17] 2025-05-16 23:44:58,707 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-16 19:45:17] 2025-05-16 23:44:58,707 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-16 19:45:17] 2025-05-16 23:44:58,708 | INFO     | job 6652055095 has completed (purged errors)
[2025-05-16 19:45:17] 2025-05-16 23:44:58,708 | INFO     | overall cleanup function is called
[2025-05-16 19:45:17] 2025-05-16 23:44:59,716 | INFO     | --- collectZombieJob: --- 10, [10105]
[2025-05-16 19:45:17] 2025-05-16 23:44:59,716 | INFO     | zombie collector waiting for pid 10105
[2025-05-16 19:45:17] 2025-05-16 23:44:59,716 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-16 19:45:17] 2025-05-16 23:44:59,716 | INFO     | collected zombie processes
[2025-05-16 19:45:17] 2025-05-16 23:44:59,716 | INFO     | will attempt to kill all subprocesses of pid=10105
[2025-05-16 19:45:17] 2025-05-16 23:44:59,807 | INFO     | process IDs to be killed: [10105] (in reverse order)
[2025-05-16 19:45:17] 2025-05-16 23:44:59,855 | WARNING  | found no corresponding commands to process id(s)
[2025-05-16 19:45:17] 2025-05-16 23:44:59,856 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-16 19:45:17] 2025-05-16 23:44:59,859 | INFO     | did not find any defunct processes belonging to 10105
[2025-05-16 19:45:17] 2025-05-16 23:44:59,862 | INFO     | did not find any defunct processes belonging to 10105
[2025-05-16 19:45:17] 2025-05-16 23:44:59,862 | INFO     | ready for new job
[2025-05-16 19:45:17] 2025-05-16 23:44:59,862 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-16 19:45:17] 2025-05-16 23:44:59,863 | INFO     | **************************************
[2025-05-16 19:45:17] 2025-05-16 23:44:59,864 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-16 19:45:17] 2025-05-16 23:44:59,864 | INFO     | **************************************
[2025-05-16 19:45:17] 2025-05-16 23:44:59,864 | INFO     | 
[2025-05-16 19:45:17] 2025-05-16 23:44:59,864 | INFO     | architecture information:
[2025-05-16 19:45:17] 2025-05-16 23:44:59,865 | INFO     | executing command: cat /etc/os-release
[2025-05-16 19:45:17] 2025-05-16 23:44:59,880 | INFO     | cat /etc/os-release:
[2025-05-16 19:45:17] NAME="CentOS Linux"
[2025-05-16 19:45:17] VERSION="7 (Core)"
[2025-05-16 19:45:17] ID="centos"
[2025-05-16 19:45:17] ID_LIKE="rhel fedora"
[2025-05-16 19:45:17] VERSION_ID="7"
[2025-05-16 19:45:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-16 19:45:17] ANSI_COLOR="0;31"
[2025-05-16 19:45:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-16 19:45:17] HOME_URL="https://www.centos.org/"
[2025-05-16 19:45:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-16 19:45:17] 
[2025-05-16 19:45:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-16 19:45:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-16 19:45:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-16 19:45:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-16 19:45:17] 
[2025-05-16 19:45:17] 2025-05-16 23:44:59,880 | INFO     | **************************************
[2025-05-16 19:45:17] 2025-05-16 23:45:00,383 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-16 19:45:17] 2025-05-16 23:45:00,401 | INFO     | sufficient remaining disk space (29383196672 B)
[2025-05-16 19:45:17] 2025-05-16 23:45:00,401 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-16 19:45:17] 2025-05-16 23:45:00,401 | INFO     | current server update state: UPDATING_FINAL
[2025-05-16 19:45:17] 2025-05-16 23:45:00,401 | INFO     | update_server=False
[2025-05-16 19:45:17] 2025-05-16 23:45:00,402 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-16 19:45:17] 2025-05-16 23:45:00,402 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-16 19:45:17] 2025-05-16 23:45:00,582 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-16 19:45:17] 2025-05-16 23:45:00,582 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-16 19:45:17] 2025-05-16 23:45:00,583 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-16 19:45:17] 2025-05-16 23:45:00,583 | INFO     | will abort loop
[2025-05-16 19:45:17] 2025-05-16 23:45:00,919 | INFO     | found 0 job(s) in 20 queues
[2025-05-16 19:45:17] 2025-05-16 23:45:00,919 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-16 19:45:17] 2025-05-16 23:45:00,920 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-16 19:45:17] 2025-05-16 23:45:01,238 | INFO     | all data control threads have been joined
[2025-05-16 19:45:17] 2025-05-16 23:45:01,407 | INFO     | [job] retrieve thread has finished
[2025-05-16 19:45:17] 2025-05-16 23:45:01,492 | INFO     | all payload control threads have been joined
[2025-05-16 19:45:17] 2025-05-16 23:45:01,588 | INFO     | [job] job monitor thread has finished
[2025-05-16 19:45:17] 2025-05-16 23:45:01,741 | INFO     | all job control threads have been joined
[2025-05-16 19:45:17] 2025-05-16 23:45:01,780 | INFO     | [payload] validate_post thread has finished
[2025-05-16 19:45:17] 2025-05-16 23:45:01,793 | INFO     | [payload] validate_pre thread has finished
[2025-05-16 19:45:17] 2025-05-16 23:45:01,862 | INFO     | [job] create_data_payload thread has finished
[2025-05-16 19:45:17] 2025-05-16 23:45:01,948 | INFO     | [payload] failed_post thread has finished
[2025-05-16 19:45:17] 2025-05-16 23:45:02,094 | INFO     | [data] copytool_in thread has finished
[2025-05-16 19:45:17] 2025-05-16 23:45:02,209 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-16 19:45:17] 2025-05-16 23:45:02,244 | INFO     | [data] control thread has finished
[2025-05-16 19:45:17] 2025-05-16 23:45:02,408 | INFO     | [data] copytool_out thread has finished
[2025-05-16 19:45:17] 2025-05-16 23:45:02,497 | INFO     | [payload] control thread has finished
[2025-05-16 19:45:17] 2025-05-16 23:45:02,503 | INFO     | [payload] execute_payloads thread has finished
[2025-05-16 19:45:17] 2025-05-16 23:45:02,742 | INFO     | [job] control thread has finished
[2025-05-16 19:45:17] 2025-05-16 23:45:02,775 | INFO     | [job] validate thread has finished
[2025-05-16 19:45:17] 2025-05-16 23:45:03,307 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-16 19:45:17] 2025-05-16 23:45:04,312 | INFO     | [job] queue monitor thread has finished
[2025-05-16 19:45:17] 2025-05-16 23:45:06,215 | INFO     | [data] queue_monitor thread has finished
[2025-05-16 19:45:17] 2025-05-16 23:45:10,805 | INFO     | job.realtimelogging is not enabled
[2025-05-16 19:45:17] 2025-05-16 23:45:11,810 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-16 19:45:17] 2025-05-16 23:45:11,877 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140440624039744)>', '<ExcThread(monitor, started 140439516604160)>']
[2025-05-16 19:45:17] 2025-05-16 23:45:11,976 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-16 19:45:17] 2025-05-16 23:45:11,976 | INFO     | [monitor] control thread has ended
[2025-05-16 19:45:17] 2025-05-16 23:45:16,899 | INFO     | all workflow threads have been joined
[2025-05-16 19:45:17] 2025-05-16 23:45:16,899 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-16 19:45:17] 2025-05-16 23:45:16,899 | INFO     | traces error code: 0
[2025-05-16 19:45:17] 2025-05-16 23:45:16,900 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-16 19:45:17] 2025-05-16 23:45:16,980 [wrapper] ==== pilot stdout END ====
[2025-05-16 19:45:17] 2025-05-16 23:45:16,984 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-16 19:45:17] 2025-05-16 23:45:16,988 [wrapper] pilotpid: 3738
[2025-05-16 19:45:17] 2025-05-16 23:45:16,992 [wrapper] Pilot exit status: 0
[2025-05-16 19:45:17] 2025-05-16 23:45:17,007 [wrapper] pandaids: 6652055095
[2025-05-16 19:45:17] 2025-05-16 23:45:17,044 [wrapper] cleanup supervisor_pilot 23810 3739
[2025-05-16 19:45:17] 2025-05-16 23:45:17,048 [wrapper] Test setup, not cleaning
[2025-05-16 19:45:17] 2025-05-16 23:45:17,052 [wrapper] apfmon messages muted
[2025-05-16 19:45:17] 2025-05-16 23:45:17,056 [wrapper] ==== wrapper stdout END ====
[2025-05-16 19:45:17] 2025-05-16 23:45:17,060 [wrapper] ==== wrapper stderr END ====
[2025-05-16 19:45:17]  *** Error codes and diagnostics ***
[2025-05-16 19:45:17]     "exeErrorCode": 0,
[2025-05-16 19:45:17]     "exeErrorDiag": "",
[2025-05-16 19:45:17]     "pilotErrorCode": 0,
[2025-05-16 19:45:17]     "pilotErrorDiag": "",
[2025-05-16 19:45:17]  *** Listing of results directory ***
[2025-05-16 19:45:17] total 421304
[2025-05-16 19:45:17] -rw-r--r-- 1 boincer umatlas    495897 May 16 14:30 pilot3.tar.gz
[2025-05-16 19:45:17] -rw-r--r-- 1 boincer umatlas      5111 May 16 14:45 queuedata.json
[2025-05-16 19:45:17] -rwx------ 1 boincer umatlas     37140 May 16 14:46 runpilot2-wrapper.sh
[2025-05-16 19:45:17] -rw-r--r-- 1 boincer umatlas       100 May 16 18:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-16 19:45:17] -rwxr-xr-x 1 boincer umatlas      7986 May 16 18:04 run_atlas
[2025-05-16 19:45:17] -rw-r--r-- 1 boincer umatlas       105 May 16 18:04 job.xml
[2025-05-16 19:45:17] -rw-r--r-- 2 boincer umatlas 225359356 May 16 18:04 EVNT.44638096._001165.pool.root.1
[2025-05-16 19:45:17] -rw-r--r-- 2 boincer umatlas     17569 May 16 18:04 start_atlas.sh
[2025-05-16 19:45:17] drwxrwx--x 2 boincer umatlas      4096 May 16 18:04 shared
[2025-05-16 19:45:17] -rw-r--r-- 2 boincer umatlas    508882 May 16 18:04 input.tar.gz
[2025-05-16 19:45:17] -rw-r--r-- 1 boincer umatlas         0 May 16 18:04 boinc_lockfile
[2025-05-16 19:45:17] -rw-r--r-- 1 boincer umatlas      2538 May 16 18:04 pandaJob.out
[2025-05-16 19:45:17] -rw------- 1 boincer umatlas       424 May 16 18:04 setup.sh.local
[2025-05-16 19:45:17] -rw------- 1 boincer umatlas    994643 May 16 18:04 agis_schedconf.cvmfs.json
[2025-05-16 19:45:17] -rw------- 1 boincer umatlas   1596741 May 16 18:04 agis_ddmendpoints.agis.ALL.json
[2025-05-16 19:45:17] drwx------ 4 boincer umatlas      4096 May 16 18:04 pilot3
[2025-05-16 19:45:17] -rw-r--r-- 1 boincer umatlas      5868 May 16 19:39 init_data.xml
[2025-05-16 19:45:17] -rw------- 1 boincer umatlas 200362094 May 16 19:44 HITS.44638099._043946.pool.root.1
[2025-05-16 19:45:17] -rw------- 1 boincer umatlas        95 May 16 19:44 pilot_heartbeat.json
[2025-05-16 19:45:17] -rw-r--r-- 1 boincer umatlas       529 May 16 19:44 boinc_task_state.xml
[2025-05-16 19:45:17] -rw------- 1 boincer umatlas      1047 May 16 19:44 memory_monitor_summary.json
[2025-05-16 19:45:17] -rw------- 1 boincer umatlas    364216 May 16 19:44 log.44638099._043946.job.log.tgz.1
[2025-05-16 19:45:17] -rw------- 1 boincer umatlas      7747 May 16 19:44 heartbeat.json
[2025-05-16 19:45:17] -rw-r--r-- 1 boincer umatlas        27 May 16 19:45 wrapper_checkpoint.txt
[2025-05-16 19:45:17] -rw-r--r-- 1 boincer umatlas      8192 May 16 19:45 boinc_mmap_file
[2025-05-16 19:45:17] -rw------- 1 boincer umatlas      4611 May 16 19:45 pilotlog.txt
[2025-05-16 19:45:17] -rw------- 1 boincer umatlas    562294 May 16 19:45 log.44638099._043946.job.log.1
[2025-05-16 19:45:17] -rw------- 1 boincer umatlas       357 May 16 19:45 output.list
[2025-05-16 19:45:17] -rw-r--r-- 1 boincer umatlas       620 May 16 19:45 runtime_log
[2025-05-16 19:45:17] -rw------- 1 boincer umatlas    942080 May 16 19:45 result.tar.gz
[2025-05-16 19:45:17] -rw-r--r-- 1 boincer umatlas     11015 May 16 19:45 runtime_log.err
[2025-05-16 19:45:17] -rw------- 1 boincer umatlas       659 May 16 19:45 ovMNDmKGFa7n9Rq4apOajLDm4fhM0noT9bVof3QYDmFNJKDmY9I7Pn.diag
[2025-05-16 19:45:17] -rw-r--r-- 1 boincer umatlas     21505 May 16 19:45 stderr.txt
[2025-05-16 19:45:17] HITS file was successfully produced:
[2025-05-16 19:45:17] -rw------- 1 boincer umatlas 200362094 May 16 19:44 shared/HITS.pool.root.1
[2025-05-16 19:45:17]  *** Contents of shared directory: ***
[2025-05-16 19:45:17] total 417196
[2025-05-16 19:45:17] -rw-r--r-- 2 boincer umatlas 225359356 May 16 18:04 ATLAS.root_0
[2025-05-16 19:45:17] -rw-r--r-- 2 boincer umatlas     17569 May 16 18:04 start_atlas.sh
[2025-05-16 19:45:17] -rw-r--r-- 2 boincer umatlas    508882 May 16 18:04 input.tar.gz
[2025-05-16 19:45:17] -rw------- 1 boincer umatlas 200362094 May 16 19:44 HITS.pool.root.1
[2025-05-16 19:45:17] -rw------- 1 boincer umatlas    942080 May 16 19:45 result.tar.gz
19:45:19 (32405): run_atlas exited; CPU time 58811.141711
19:45:19 (32405): called boinc_finish(0)

</stderr_txt>
]]>

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